View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21284_low_65 (Length: 266)
Name: NF21284_low_65
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21284_low_65 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 54 - 258
Target Start/End: Original strand, 394867 - 395071
Alignment:
| Q |
54 |
aactaaattttcgaaagtttgttacacttactactaaatagtcattatgatccgcatatatcgtttactataactattttatttgttatttgtattgttt |
153 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
394867 |
aactaaattttcgaaagtttgttacacttactactaaatagtcattatgatccgcatatatcgtttactataactattttatttgttatttgtattgttt |
394966 |
T |
|
| Q |
154 |
ataaagagaactttacaaagagtgttgcttagttcccttccaaacaaggagtgttacaaacaaagatatataacattaacataagcattcatatttcttc |
253 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
394967 |
ataaagagaactttacaaagagtgttgcttagttcccttcaaaacaaggagtgttacaaacaaagatatataacattaacataagcattcatatttcttc |
395066 |
T |
|
| Q |
254 |
atctc |
258 |
Q |
| |
|
||||| |
|
|
| T |
395067 |
atctc |
395071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University