View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21284_low_73 (Length: 247)
Name: NF21284_low_73
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21284_low_73 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 23934185 - 23934426
Alignment:
| Q |
9 |
atgaatgaacaaataatctcggttgcataattcgacagtaacaaccaacagaactataaactttgacaaatttgtgtataagcttctaataatgctagga |
108 |
Q |
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| T |
23934185 |
atgaatgaacaaataatctcgattgcataattcgacagtaacaacgaacagaactataaactttgacaaatttgtgtataagcttctaataatgctagga |
23934284 |
T |
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| Q |
109 |
atattatatcatcattccaaattattgttacacaaatatgacattaaacactgttgtattaaac---aactattttctccatcgagcagtatatagatac |
205 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
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| T |
23934285 |
atattatatcatcattccaaattattgtcacacaaatatgacattaaacactgttgtattaaacttaaactattttctccgtcgagcagtatatagatac |
23934384 |
T |
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| Q |
206 |
atacatgccgtaaaacagtaatcaagaaactagtaatacata |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
23934385 |
atacatgccgtaaaacagtaatcaagaaactagtaatacata |
23934426 |
T |
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