View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21284_low_87 (Length: 224)
Name: NF21284_low_87
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21284_low_87 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 4384700 - 4384895
Alignment:
| Q |
12 |
agcataggacctcaagctacctccttatgcatgcatcttccacaaatcagtgagtagtcattcattcctgaaagaatgacagctgaaagcacaaccttgt |
111 |
Q |
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| T |
4384700 |
agcataggacctcaagctacctccctatgcatgcatcttccacaaatcagtgagtagtcattcattcctgaaagaatgacagctgaaagcacaaccttgt |
4384799 |
T |
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| Q |
112 |
atcattatcatgtacatattttctctaccaatccaacacaaacgaactgctcatagtcaaaccagatatcgagtactatgtagtatgtatcatgta |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4384800 |
atcattatcatgtacatattttctctaccaatccaacacaaacgaactgctcatagtcaaaccagatatcgagtactatgtagtatgtatcatgta |
4384895 |
T |
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