View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21286_low_5 (Length: 237)
Name: NF21286_low_5
Description: NF21286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21286_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25955487 - 25955270
Alignment:
| Q |
1 |
tttgtgtgtttgatatgaagttgtgcatattattgctgaatgtagggtggccctgagggtgtgtccccgacaagggtcccattttttcggaggctgcata |
100 |
Q |
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| T |
25955487 |
tttgtgtgtttgatatgaagttgtgcatattattgctgaatgtagggtggccctgagggtgtgtccccgacaagggtcccattttttcggaggccgcata |
25955388 |
T |
|
| Q |
101 |
tacaattaacagacccagtcatattctatatagaaaaatcagactcattcaaatgtgccgattcacttgtctcactcaaatttgataacgataaaaatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
25955387 |
tacaattaacagacccagtcatattctatatagaaaaatcagactcattcaaatgtgccgattcacttgtctcactcaaatttgataacgataaaaatat |
25955288 |
T |
|
| Q |
201 |
ttcataggcttgtgtgttg |
219 |
Q |
| |
|
||||| |||||||||||| |
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|
| T |
25955287 |
ttcat-tgcttgtgtgttg |
25955270 |
T |
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