View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21287_low_30 (Length: 238)
Name: NF21287_low_30
Description: NF21287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21287_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 37950002 - 37950218
Alignment:
| Q |
1 |
tattcaaaagtcaaaacattgacatataaacttggaatattgagattctatttactcaaaggattctnnnnnnnnnntggggtccaaatcgtaacaaata |
100 |
Q |
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| T |
37950002 |
tattcaaaagtcaaaacattgacatataaacttggaatattgagattctatttactcaaatgattctaaaaaaaaa-tggggtcaaaatcgtaacaaata |
37950100 |
T |
|
| Q |
101 |
aaggaaactgtagtagtgggaaaagnnnnnnnngcaagttaacatatgcatgatgatactttgtcnnnnnnntatgcatgatgatacagcaaacttcaaa |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
37950101 |
aaggaaactgtagtagtgggaaaagaaaaaaaagcaagttaacatatgcatgatgatactttgtcaaaaaaatatgcatgatgatacagcaaacttcaaa |
37950200 |
T |
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| Q |
201 |
atccataaaatagaatgt |
218 |
Q |
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|||||||||||||||||| |
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| T |
37950201 |
atccataaaatagaatgt |
37950218 |
T |
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