View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21288_high_11 (Length: 239)

Name: NF21288_high_11
Description: NF21288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21288_high_11
NF21288_high_11
[»] chr5 (11 HSPs)
chr5 (1-222)||(26549891-26550112)
chr5 (1-222)||(28564020-28564241)
chr5 (1-222)||(19687836-19688057)
chr5 (2-222)||(30763077-30763297)
chr5 (1-222)||(2455082-2455304)
chr5 (29-203)||(2838393-2838568)
chr5 (4-222)||(34134600-34134818)
chr5 (29-222)||(22938811-22939005)
chr5 (1-112)||(35382307-35382418)
chr5 (29-222)||(21334100-21334297)
chr5 (7-211)||(18767156-18767368)
[»] scaffold0360 (1 HSPs)
scaffold0360 (1-222)||(4219-4439)
[»] chr3 (20 HSPs)
chr3 (1-222)||(9156593-9156814)
chr3 (32-222)||(10961527-10961717)
chr3 (32-222)||(10965036-10965226)
chr3 (1-144)||(30159723-30159866)
chr3 (29-222)||(18540923-18541115)
chr3 (1-219)||(22995272-22995488)
chr3 (29-222)||(28328964-28329157)
chr3 (33-220)||(19303079-19303269)
chr3 (29-222)||(24127102-24127294)
chr3 (29-222)||(12541782-12541976)
chr3 (29-222)||(13556717-13556909)
chr3 (29-222)||(22025875-22026069)
chr3 (29-222)||(2777097-2777290)
chr3 (32-222)||(47053042-47053234)
chr3 (29-222)||(55033377-55033571)
chr3 (23-222)||(10883092-10883292)
chr3 (114-222)||(15196933-15197041)
chr3 (29-205)||(7831896-7832074)
chr3 (29-222)||(36534430-36534623)
chr3 (41-72)||(15196880-15196911)
[»] chr7 (9 HSPs)
chr7 (1-216)||(16222354-16222569)
chr7 (1-218)||(13811031-13811249)
chr7 (29-222)||(9274743-9274940)
chr7 (29-222)||(22231029-22231222)
chr7 (29-222)||(22255517-22255710)
chr7 (29-222)||(26137493-26137687)
chr7 (29-222)||(4544003-4544196)
chr7 (29-222)||(45288883-45289076)
chr7 (29-222)||(20594958-20595153)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-222)||(225556-225778)
[»] chr8 (12 HSPs)
chr8 (1-222)||(31983198-31983420)
chr8 (1-222)||(22224010-22224230)
chr8 (1-222)||(22230352-22230572)
chr8 (29-222)||(12584536-12584730)
chr8 (29-222)||(23945569-23945762)
chr8 (22-205)||(17929365-17929550)
chr8 (29-222)||(33878994-33879188)
chr8 (115-218)||(39658495-39658598)
chr8 (29-222)||(38250086-38250281)
chr8 (29-222)||(23645357-23645552)
chr8 (30-222)||(25593298-25593492)
chr8 (104-218)||(7946024-7946136)
[»] chr6 (16 HSPs)
chr6 (1-222)||(32111337-32111558)
chr6 (1-218)||(21632636-21632852)
chr6 (1-222)||(25978399-25978619)
chr6 (1-222)||(7836277-7836498)
chr6 (29-222)||(23841248-23841442)
chr6 (29-222)||(18139656-18139850)
chr6 (29-222)||(22959237-22959431)
chr6 (29-222)||(23828961-23829155)
chr6 (29-220)||(14967866-14968058)
chr6 (1-202)||(11127293-11127497)
chr6 (29-222)||(12745034-12745229)
chr6 (29-222)||(28109342-28109536)
chr6 (29-222)||(23380574-23380768)
chr6 (29-218)||(24408617-24408806)
chr6 (29-222)||(12981916-12982110)
chr6 (29-170)||(25455747-25455890)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-222)||(8810-9021)
[»] chr4 (13 HSPs)
chr4 (1-190)||(26061492-26061681)
chr4 (29-222)||(49638216-49638410)
chr4 (29-222)||(39499960-39500152)
chr4 (29-222)||(19825850-19826044)
chr4 (29-222)||(5672090-5672284)
chr4 (29-222)||(15432746-15432941)
chr4 (29-205)||(15161441-15161618)
chr4 (29-222)||(27678708-27678902)
chr4 (29-222)||(56197060-56197255)
chr4 (29-205)||(3799543-3799720)
chr4 (29-222)||(19861910-19862105)
chr4 (167-222)||(22091650-22091705)
chr4 (7-87)||(22091447-22091527)
[»] chr1 (4 HSPs)
chr1 (1-222)||(49717906-49718127)
chr1 (29-222)||(22454986-22455180)
chr1 (29-202)||(21020097-21020272)
chr1 (29-143)||(45939765-45939878)
[»] scaffold0083 (1 HSPs)
scaffold0083 (29-222)||(27503-27698)
[»] scaffold0270 (1 HSPs)
scaffold0270 (29-222)||(1802-1995)
[»] chr2 (10 HSPs)
chr2 (29-222)||(31429170-31429363)
chr2 (29-222)||(16789159-16789352)
chr2 (33-222)||(13973558-13973747)
chr2 (29-222)||(25958118-25958311)
chr2 (29-222)||(1505052-1505247)
chr2 (29-222)||(24236605-24236800)
chr2 (29-222)||(25872276-25872470)
chr2 (29-222)||(45455374-45455569)
chr2 (31-222)||(9187085-9187280)
chr2 (1-52)||(11058275-11058326)
[»] scaffold0126 (1 HSPs)
scaffold0126 (29-222)||(1328-1523)
[»] scaffold0048 (2 HSPs)
scaffold0048 (4-222)||(27328-27546)
scaffold0048 (29-222)||(14073-14269)
[»] scaffold0520 (1 HSPs)
scaffold0520 (29-222)||(10780-10975)
[»] scaffold0036 (1 HSPs)
scaffold0036 (29-222)||(111658-111853)
[»] scaffold0321 (1 HSPs)
scaffold0321 (33-222)||(4586-4778)
[»] scaffold0084 (1 HSPs)
scaffold0084 (29-222)||(27556-27751)
[»] scaffold0037 (1 HSPs)
scaffold0037 (114-222)||(96998-97106)
[»] scaffold0214 (3 HSPs)
scaffold0214 (102-200)||(21594-21693)
scaffold0214 (29-72)||(11916-11959)
scaffold0214 (29-71)||(25940-25982)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-222)||(61322-61517)
[»] scaffold0034 (1 HSPs)
scaffold0034 (32-183)||(50050-50199)
[»] scaffold0043 (1 HSPs)
scaffold0043 (114-222)||(12824-12932)


Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26550112 - 26549891
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  26550112 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggcacaaattggctttcaaaaaggataaattcaatcaaaat 26550013  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26550012 cagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgataaagatcaatcaacagtaaagaaacaatgcaagttctagaa 26549913  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  26549912 atgtagttgcacggaacactct 26549891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 28564020 - 28564241
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  28564020 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaagcctaccggcacaaattggctttcaaaaaggataaattcaatcaaaat 28564119  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28564120 cagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgataaagatcaatcaacagtaaagaaacaatgcaagttctagaa 28564219  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  28564220 atgtagttgcacggaacactct 28564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 19688057 - 19687836
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  19688057 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggctttcaaaaaggataaattcaatcaaagt 19687958  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19687957 cagggtaggcttgaaaaggctcacatgaccaaacacttttgcctcagtgtgtatatgacaaagatcaatcaacaataaagaaacaatgcaagttctagaa 19687858  T
Q  201 atgtagttgcacggaacactct 222  Q
    || |||||||||||||||||||    
T  19687857 atttagttgcacggaacactct 19687836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 30763297 - 30763077
Alignment:
Q  2 taaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaatt 101  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||     
T  30763297 taaaagtccctaggctcaatatgtagcttgtcaccgaataaaaagatctaaacttaccggctcaaattggctttcaaaaaggataaattcaatcaaaatc 30763198  T
Q  102 agggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaa 201  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  30763197 agggtaggctggaaaaggctcacaagaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcaatggtaaagaaacaatgcaagttctagaaa 30763098  T
Q  202 tgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||    
T  30763097 tgtagttgcacggaacactct 30763077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 2455304 - 2455082
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaaa 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||| | ||    
T  2455304 ctaaaagtctctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggctcaatttggatttcaaaaaggataaatttcaattagaa 2455205  T
Q  100 ttagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctaga 199  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2455204 tcagggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgtgtatgtgacaaagatcaatcaacaataaagaaacaatgcaagttctaga 2455105  T
Q  200 aatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||||    
T  2455104 aatgtagttgcacggaacactct 2455082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 2838393 - 2838568
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||| |  |||| | ||| ||||||||||| ||| |||||||||    
T  2838393 ttgtcaccgaacaaaaagatctaaacctatcggctcaatttggc-ttaaaacaggataaaatatcaattataatcagggtaggcttcaaacggctcacag 2838491  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatg 203  Q
     |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  2838492 aaccaagcacttttgtctcaatgtgtatatgacaaagattaatcgacagtaaagaaacgatgcaagttctagaaatg 2838568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 34134600 - 34134818
Alignment:
Q  4 aaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaatt 101  Q
    |||||||||| ||| |  || ||| ||||||||||||||||||||||||||||||| |||||| ||||| |  | ||||||||||  |||||  | |||     
T  34134600 aaagtctctaagcttataatgtagtttgtcaccgaacaaaaagatctaaacctaccagctcaatttggc-taaagaaaggataaaatttcaaa-acaatc 34134697  T
Q  102 agggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaa 201  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||    
T  34134698 agggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaa 34134797  T
Q  202 tgtagttgcacggaacactct 222  Q
    | ||  |||| ||||||||||    
T  34134798 tataaatgcatggaacactct 34134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 22938811 - 22939005
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||| |||||   |||||  || |  ||||||||||| |||| ||||||||    
T  22938811 ttgtcaccgtacaaaaagatctaaacctaccggctcaaattggc-taaaaaaatgataatatttcaaataataacagggtaggcttcaaaaaggctcaca 22938909  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||| |||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  22938910 ggaccatgcacttttgcctcagtgtgctaatgacaaagatcaatc-acagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 22939005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35382307 - 35382418
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||   ||||    
T  35382307 ctaaaagtctctacgctaaatatgtagtttgtcaccgaacaaaaagatctaaacataccggctcaatttggctttcaaaaaggataatttcaaattaaat 35382406  T
Q  101 tagggtaggctt 112  Q
     |||||||||||    
T  35382407 aagggtaggctt 35382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 21334100 - 21334297
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc-attcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcac 124  Q
    |||||||||||||||||||||||||||||||| |||||||| || |   |||||||||||   ||| |  || |  ||||||||||| |||| |||||||    
T  21334100 ttgtcaccgaacaaaaagatctaaacctaccgcctcaaattagctaaaaaaaaaggataatatttcgaataataacagggtaggcttcaaaaaggctcac 21334199  T
Q  125 aggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||| ||||||||||||| ||||   |||||||||||||||| ||| || ||||| | ||||||||||| |||||||  |||| ||||||||||    
T  21334200 aggaccaatcacttttgcctcagtgtgctaatgacaaagatcaatcgacaatagagaaaaattgcaagttctaaaaatgtaaatgcatggaacactct 21334297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 18767156 - 18767368
Alignment:
Q  7 gtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaagga-taaattca--atcaaaattag 103  Q
    ||||||||||| | ||||||| ||||||||||| |||| |||||| |||||||| |||||| || | ||  ||| ||| ||||||||  | |||||| |     
T  18767156 gtctctaggcttagtatatagtttgtcaccgaagaaaaggatctacacctaccgactcaaactgacttttcaaagggattaaattcaagaacaaaatcaa 18767255  T
Q  104 ggtaggctt-gaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgaca-----aagatcaatcaacagtaaagaaacaatgcaagttcta 197  Q
    |||||||||  ||||||||||  | ||||| ||| ||||||| | ||||| |||||||     |||| ||||||||| |||||||| | |||||||||||    
T  18767256 ggtaggcttcaaaaaggctcatggtaccaaacac-tttgcctaagtgtgtgtatgacattgacaagaccaatcaacaataaagaaaaattgcaagttcta 18767354  T
Q  198 gaaatgtagttgca 211  Q
     |||| ||||||||    
T  18767355 caaatatagttgca 18767368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 4439 - 4219
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  4439 ctaaaagtc-ctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaatctaccggctcaaattggctttcaaaaaggataaattcaatcaaaat 4341  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  4340 cagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgataaagatcaatcaacagtaaagaaacaatgcaagttctataa 4241  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  4240 atgtagttgcacggaacactct 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9156814 - 9156593
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  9156814 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggctttcaaaaaggataaattcaatcaatat 9156715  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  9156714 cagggtaggcttgaaaaggctcacaggaccgagcacttttgcctcagtgtgtatatgataaagatcaattaacagtaaagaaacaatgcaagttctagaa 9156615  T
Q  201 atgtagttgcacggaacactct 222  Q
    || ||||||||  |||||||||    
T  9156614 atctagttgcagagaacactct 9156593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 10961717 - 10961527
Alignment:
Q  32 tcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattc--aatcaaaattagggtaggcttgaaaaggctcacaggac 129  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   ||||| ||| ||||||||||| ||| ||||||||||||    
T  10961717 tcaccgaacaaaaagatctaaacctaccggctcaatttggctttcaaaaaggataaatttcaaatcataatcagggtaggcttcaaa-ggctcacaggac 10961619  T
Q  130 caagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10961618 caagcacttt-gcctcaatgtgtaaatgacatagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 10961527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 10965226 - 10965036
Alignment:
Q  32 tcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattc--aatcaaaattagggtaggcttgaaaaggctcacaggac 129  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   ||||| ||| ||||||||||| ||| ||||||||||||    
T  10965226 tcaccgaacaaaaagatctaaacctaccggctcaatttggctttcaaaaaggataaatttcaaatcataatcagggtaggcttcaaa-ggctcacaggac 10965128  T
Q  130 caagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10965127 caagcacttt-gcctcaatgtgtaaatgacatagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 10965036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30159723 - 30159866
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30159723 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggctttcaaaaaggataaattcaatcaaaat 30159822  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcct 144  Q
     ||||||||||||||||||||||||| |||||||||||||||||    
T  30159823 cagggtaggcttgaaaaggctcacagaaccaagcacttttgcct 30159866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 18541115 - 18540923
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaattagggtaggcttgaaaaggctcacagga 128  Q
    |||||||  |||||||| ||||||||||| |||||||||||||  |||||||  ||||| || ||| ||||| | ||||||||| ||| |||||||| ||    
T  18541115 ttgtcactaaacaaaaaaatctaaacctatcggctcaaattggttttcaaaactgataactttaattaaaatcaaggtaggcttcaaa-ggctcacatga 18541017  T
Q  129 ccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18541016 ccaagcacttttacctcaatgtgtaaatgacaaagaccaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 18540923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22995272 - 22995488
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    |||||| ||||||||||  |||| ||| |||||| ||||||||||||| |||||||||||| |||| ||||  ||||||||||||||||||||  |||||    
T  22995272 ctaaaattctctaggcttcatatgtagtttgtcaacgaacaaaaagatttaaacctaccggttcaatttggatttcaaaaaggataaattcaaataaaat 22995371  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     |||||| |||| ||| |||||| | ||||||||||||| |||||| |||||| |||||||| | ||||||||| ||||||||||||||||||||| |||    
T  22995372 cagggtaagcttcaaa-ggctcaaatgaccaagcacttt-gcctcagtgtgtaaatgacaaaaaccaatcaacattaaagaaacaatgcaagttcttgaa 22995469  T
Q  201 atgtagttgcacggaacac 219  Q
    |||||||||||||||||||    
T  22995470 atgtagttgcacggaacac 22995488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 28329157 - 28328964
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | ||||||||||  |||||  | ||| ||||||||||| |||||||||||||    
T  28329157 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataaaatttcaaa-acaatcagggtaggcttcaaaaggctcacag 28329060  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||| ||||  |||| ||||||||||    
T  28329059 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaattgtaaatgcatggaacactct 28328964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 220
Target Start/End: Original strand, 19303079 - 19303269
Alignment:
Q  33 caccgaacaaaaag-atctaaacctaccggctcaaattggcattcaaaaaggataaatt----caatcaaaattagggtaggcttgaaaaggctcacagg 127  Q
    |||||||||||||| | |||||||||| ||||||| ||||| |  |||||||||||| |    |||| ||||  ||||||||||| |||||||||| |||    
T  19303079 caccgaacaaaaaggacctaaacctactggctcaatttggctt--aaaaaggataaaatataacaattaaaagcagggtaggcttcaaaaggctcatagg 19303176  T
Q  128 accaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacact 220  Q
    || |||||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  19303177 acaaagcacttttgcctcagtctgtatatgacaaagaccaatcaacagtagagaaacaatgcaagttctagaaatgtagttgcatgaaacact 19303269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 24127294 - 24127102
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |  | ||||||||||  |||||  | ||| ||||||||||  |||||||||||||    
T  24127294 ttgtcaccgaacaaaaagatctaaacctaccagctcaatttggc-taaagaaaggataaaatttcaaa-acaatcagggtaggctc-aaaaggctcacag 24127198  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  24127197 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 24127102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 12541782 - 12541976
Alignment:
Q  29 ttgtcaccgaacaaaaa-gatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcaca 125  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| |  | || |||||| ||  |||| | ||| ||||||||||| ||||||||||||    
T  12541782 ttgtcaccgaacaaaaaagatctaaacctaccggctcaatttggc-taaagaacggataatttttcaat-acaatcagggtaggcttcaaaaggctcaca 12541879  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  12541880 ggaccaagcacttttgcctcagtgtgtatatcacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 12541976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 13556909 - 13556717
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |  | ||||||||||  |||||  | ||| ||||||||||  |||||||||||||    
T  13556909 ttgtcaccgaacaaaaagatctaaacctaccagctcaatttggc-taaagaaaggataaaatttcaaa-acaatcagggtaggctc-aaaaggctcacag 13556813  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||| ||||||||||  |||| ||||||||||    
T  13556812 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttatagaaatgtaaatgcatggaacactct 13556717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 22026069 - 22025875
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| |  | |||||||||   |||||| | ||| ||||||||||| |||| ||||||||    
T  22026069 ttgttaccgaacaaaaagatctaaacctaccggctcaatttggc-taaacaaaggataatatttcaat-ataatcagggtaggcttcaaaaaggctcaca 22025972  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||||||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  22025971 ggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcaacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 22025875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 2777290 - 2777097
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||   |||||  || |  ||||||||||| |||| ||||||||    
T  2777290 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaagataatatttcaaataataacagggtaggcttcaaaaaggctcaca 2777193  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
     |||||||||||||||||||| |||| ||||||| |||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  2777192 tgaccaagcacttttgcctcagtgtgcatatgac-aagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaagtgcatggaacactct 2777097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 47053234 - 47053042
Alignment:
Q  32 tcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcacagga 128  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  | |||||||||  ||||||  | ||  |||||| |||| |||| |||||||||||    
T  47053234 tcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataattattcaaatataaacagggtatgcttcaaaaaggctcacagga 47053136  T
Q  129 ccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||| ||||   |||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  47053135 ccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 47053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 55033377 - 55033571
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||   || ||  || | |||||||||||| |||| ||||||||    
T  55033377 ttgtcatcgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaggataatatttaaaataataatagggtaggcttcaaaaaggctcaca 55033474  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||  ||||   |||||||||||||||| ||| || ||||| | |||||||||||||||||||  | || ||||||||||    
T  55033475 ggaccaagcacttttgcctccgtgtgctaatgacaaagatcaatcgacattagagaaaaattgcaagttctagaaatgtaaatacatggaacactct 55033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 10883292 - 10883092
Alignment:
Q  23 tatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-gg 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||   |||||  || |  ||||||||||| |||| ||    
T  10883292 tatagtttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaagataatatttcaaataataacagggtaggcttcaaaaagg 10883195  T
Q  120 ctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacac 219  Q
    |||||||||||||||| |||||||||| ||||   || ||||||||||||| ||| || ||||| | ||||||||| |||||||||  |||| |||||||    
T  10883194 ctcacaggaccaagcatttttgcctcagtgtgctaataacaaagatcaatcgacaatagagaaaaattgcaagttccagaaatgtaaatgcatggaacac 10883095  T
Q  220 tct 222  Q
    |||    
T  10883094 tct 10883092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 15196933 - 15197041
Alignment:
Q  114 aaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacg 213  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||| || ||||| | |||||||||||||||||||  |||| |    
T  15196933 aaaaggctcacaggaccaagcacttttgcctcaatgtgctagtgacaaagatcaatcaacaatagagaaaaattgcaagttctagaaatgtaaatgcatg 15197032  T
Q  214 gaacactct 222  Q
    |||||||||    
T  15197033 gaacactct 15197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 7832074 - 7831896
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||||||  |||||  | ||| ||||||||||| |||| ||||||||    
T  7832074 ttgtcaccgaacaaaaagatctaaacctatcggcttaatttggc-taaaaagaggataaaatttcaaatataatcagggtaggcttcaaaaaggctcaca 7831976  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgta 205  Q
     ||  |||||||||||||||| ||||   ||| |||||||||||| | |||| ||||| | |||||||||||||||||||    
T  7831975 agattaagcacttttgcctcagtgtgctaatggcaaagatcaatcgatagtagagaaaaattgcaagttctagaaatgta 7831896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 36534430 - 36534623
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||| | ||||||||||||||||||||||||| |  | ||||||||  |   |||| | ||  | ||||||||| |||||| ||||||    
T  36534430 ttgtcaccgaacaaaa-gttctaaacctaccggctcaaattggc-taaagaaaggatatttaaacaattataaacaaggtaggcttcaaaaggatcacag 36534527  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||  ||||   ||||||||||| |||| ||| || |||||||||||||||| || |||||||   ||| ||||||||||    
T  36534528 gaccaagcacttttgcctcggtgtgctaatgacaaagattaatcgacaatagagaaacaatgcaagttatataaatgtaaacgcatggaacactct 36534623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 72
Target Start/End: Original strand, 15196880 - 15196911
Alignment:
Q  41 aaaaagatctaaacctaccggctcaaattggc 72  Q
    ||||||||||||||||||||||||||||||||    
T  15196880 aaaaagatctaaacctaccggctcaaattggc 15196911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 16222569 - 16222354
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  16222569 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatcgaaacctatcggctcaaatttgctttcaaaaaggataaattcaataaaaat 16222470  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     || |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  16222469 aagagtaggcttgaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgataaagatcaatcaacagtaaagaaacaacgcaagttctagaa 16222370  T
Q  201 atgtagttgcacggaa 216  Q
    ||||||||||||||||    
T  16222369 atgtagttgcacggaa 16222354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 13811031 - 13811249
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaa-gatctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaa 98  Q
    ||||||||| ||||||  ||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||| ||| |||| |||    
T  13811031 ctaaaagtc-ctaggcataatatgtagtttgtcaccgaacaaaaatgatctaaacctaccagctcaaattggttttcaaaaaggatatatttcaattaaa 13811129  T
Q  99 attagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctag 198  Q
    || ||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  13811130 atcagggtaggcttcaaaaggctcacaagaccaaacacttttgcctcagtgtgtatatgacaaagatcaatcaacagtaaagaaacaatgtaagttctaa 13811229  T
Q  199 aaatgtagttgcacggaaca 218  Q
    ||||||||||||| ||||||    
T  13811230 aaatgtagttgcatggaaca 13811249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 9274743 - 9274940
Alignment:
Q  29 ttgtcaccgaacaaaaaga-tctaaacctaccggctcaaattggcattcaaaaaggataaatt----caatcaaaattagggtaggcttgaaaaggctca 123  Q
    |||||||  |||||||||| ||||||||| ||||||||| ||||| || |||||||||||| |    |||| ||||| ||||||||||| ||||||||||    
T  9274743 ttgtcactaaacaaaaagaatctaaaccttccggctcaatttggc-ttaaaaaaggataaaatataacaattaaaatcagggtaggcttcaaaaggctca 9274841  T
Q  124 caggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||| |||||||||||| ||||||||||| ||| | || ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  9274842 caggaccaagaacttttgcctcagtgtgtatatgataaataccactcaacagtagagaaacaatgcaagttctagaaatgtagttgcatggaacactct 9274940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 22231029 - 22231222
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||| |||||  |||||  | ||| ||||||||||| |||||||||||||    
T  22231029 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaagaataaaatttcaaa-acaatcagggtaggcttcaaaaggctcacag 22231126  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  22231127 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 22231222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 22255710 - 22255517
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||| |||||  |||||  | ||| ||||||||||| |||||||||||||    
T  22255710 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaagaataaaatttcaaa-acaatcagggtaggcttcaaaaggctcacag 22255613  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||| | |||||||||||||||||||  |||| ||||||||||    
T  22255612 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacaacaaagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 22255517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 26137493 - 26137687
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||  ||||||  | ||  ||||||||||| |||||||||||||    
T  26137493 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc-taaagaaaggataattattcaaatataaacagggtaggcttcaaaaggctcacag 26137591  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  26137592 gaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 26137687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 4544196 - 4544003
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |  | |||| |||||  |||||  | ||| ||||||||||| |||||||||||||    
T  4544196 ttgtcaccgaacaaaaagatctaaacccaccggctcaatttggc-taaagaaagaataaaatttcaaa-acaatcagggtaggcttcaaaaggctcacag 4544099  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||| | |||||||||||||||||||  |||| ||||||||||    
T  4544098 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacaacaaagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 4544003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 45288883 - 45289076
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||  ||||| ||||| |  | ||||||||||  |||||  | ||| ||||||||||| |||||||||||||    
T  45288883 ttgtcaccgaacaaaaagatctaaacctaccaactcaatttggc-tgaagaaaggataaaatttcaaa-acaatcagggtaggctttaaaaggctcacag 45288980  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  45288981 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 45289076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 20595153 - 20594958
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||| ||||||||||| |||| || ||||| |  | |||||||||  |||||   ||||  ||||||||||| |||| ||||||||    
T  20595153 ttgtcaccgaacaaaaagttctaaacctacgggcttaacttggc-taaagaaaggataattattcatataaaaacagggtaggcttcaaaaaggctcaca 20595055  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||| |||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | | ||||||||||||| |||  |||| ||||||||||    
T  20595054 ggacaaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattacaagttctagaaaagtaaatgcatggaacactct 20594958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 225778 - 225556
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaaa 99  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||||| |||| | ||    
T  225778 ctaaaagtctctaggcttaatatgtagtttgtcaccgaacaaaaagatctaaacataccggttcaatttggctttcaaaaaggataaatttcaattagaa 225679  T
Q  100 ttagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctaga 199  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  225678 tcagggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcaacaataaagaaacaatgcaagttctaga 225579  T
Q  200 aatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||||    
T  225578 aatgtagttgcacggaacactct 225556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 31983420 - 31983198
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaaa 99  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||||| |||| | ||    
T  31983420 ctaaaagtctctaggcttaatatgtagtttgtcaccgaacaaaaagatctaaacataccggttcaatttggctttcaaaaaggataaatttcaattagaa 31983321  T
Q  100 ttagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctaga 199  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31983320 tcagggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcaacaataaagaaacaatgcaagttctaga 31983221  T
Q  200 aatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||||    
T  31983220 aatgtagttgcacggaacactct 31983198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22224010 - 22224230
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||   ||||    
T  22224010 ctaaaagtctctaggctaaatatgtagtttgtcaccgaacaaaaagatttaaacctaccggctcaatttggctttcaaaaaggataatttcaaattaaat 22224109  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||| |||||||||||||||||||||||||    
T  22224110 aagggtaggcttcaaa-ggctcacaggaccaagcacttttgcctcagtgtgtaaatgacaaagaccgatcaacaataaagaaacaatgcaagttctagaa 22224208  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  22224209 atgtagttgcacggaacactct 22224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22230352 - 22230572
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||   ||||    
T  22230352 ctaaaagtctctaggctaaatatgtagtttgtcaccgaacaaaaagatttaaacctaccggctcaatttggctttcaaaaaggataatttcaaattaaat 22230451  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||| |||||||||||||||||||||||||    
T  22230452 aagggtaggcttcaaa-ggctcacaggaccaagcacttttgcctcagtgtgtaaatgacaaagaccgatcaacaataaagaaacaatgcaagttctagaa 22230550  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  22230551 atgtagttgcacggaacactct 22230572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 12584730 - 12584536
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||   |||||  || |  ||||||||||| |||| ||||||||    
T  12584730 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaggataatatttcaaataataacagggtaggcttcaaaaaggctcaca 12584633  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| | |||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  12584632 ggaccaagcacttttgcctcagtgtgctaatgacaaaaatcaatcgatagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 12584536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 23945569 - 23945762
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||| |||||  |||||| | ||| ||||||||||| ||||||||||||     
T  23945569 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaagaataaaatttcaat-acaatcagggtaggcttcaaaaggctcacaa 23945666  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||| | ||| ||||||||||||||||||| |||| | ||||| | ||||||||||| ||||| |  |||| ||||||||||    
T  23945667 gaccaagcacttttgccttagtgtatatatgacaaagatcaatcgacagcagagaaaaattgcaagttctaaaaatgcaaatgcatggaacactct 23945762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 17929550 - 17929365
Alignment:
Q  22 atatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaa-aag 118  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| ||||| |   ||||||||||   |||||  | ||| ||||||||||| || ||     
T  17929550 atatagtttgtcaccgaacaaaaagatttaaacctaccagctcaatttggc-taagaaaaggataacatttcaaatataataagggtaggcttcaagaaa 17929452  T
Q  119 gctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgta 205  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  17929451 gctcacaggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaacaatgcaacttctagaaatgta 17929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 33878994 - 33879188
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaagg-ctcaca 125  Q
    |||||||||||||||||||||||||||||||||| ||| ||| | |  | ||||||||||  |||||| | ||| ||||||||||| |||||| ||||||    
T  33878994 ttgtcaccgaacaaaaagatctaaacctaccggcacaatttgac-taaagaaaggataaaatttcaat-acaatcagggtaggcttcaaaagggctcaca 33879091  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||| ||||||||| ||||   |||||||||||||||||||| || ||||| | |||||||||||||||||||  |||| | ||||||||    
T  33879092 ggaccaagcacgtttgcctcagtgtgctaatgacaaagatcaatcaacaatagagaaaaattgcaagttctagaaatgtaaatgcatgaaacactct 33879188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 39658495 - 39658598
Alignment:
Q  115 aaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacgg 214  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  39658495 aaaggctcacaggaccaaacactttcgcctcaatgtgtaaatgatcgagaccaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacga 39658594  T
Q  215 aaca 218  Q
    ||||    
T  39658595 aaca 39658598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 38250086 - 38250281
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |   ||||||||||  ||||||  | ||  | ||||||||| |||| ||||||||    
T  38250086 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttgac-taagaaaaggataataattcaaatataaacatggtaggcttcaaaaaggctcaca 38250184  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| ||| ||||||||| ||||   |||||||||||||||  | |||| |||||||||||||||||||||||||||   ||| ||||||||||    
T  38250185 ggaccaaacacgtttgcctcagtgtgctaatgacaaagatcaattgatagtagagaaacaatgcaagttctagaaatgtaaaagcatggaacactct 38250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 23645552 - 23645357
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||| |  | |||||||||  ||||||  | ||  ||||||||||| |||| ||||||||    
T  23645552 ttgtctccgaaaaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataattattcaaatataaacagggtaggcttcaaaaaggctcaca 23645454  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
     |||||| ||||||||||||| ||||   |||||||||||||||| | | || ||||| | |||||||||||||||||||  |||| ||||||||||    
T  23645453 tgaccaaacacttttgcctcagtgtgctaatgacaaagatcaatcgatattagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 23645357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 222
Target Start/End: Original strand, 25593298 - 25593492
Alignment:
Q  30 tgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcacag 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |  | ||| |||||  ||||||  | ||  ||||||||||| |||| |||||||||    
T  25593298 tgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaagataattattcaaatataaacagggtaggcttcaaaaaggctcacag 25593396  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||| |||||||| |||| |||||   |||||||| |||||  ||| || ||||| | |||||||||||||||||||  |||| ||||||||||    
T  25593397 gaccaaacacttttgtctcagtgtgttagtgacaaaggtcaattgacaatagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 25593492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 7946024 - 7946136
Alignment:
Q  104 ggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatg 203  Q
    ||||||||| |||||||||||   ||||| |||||| |||| | ||||| |||||||| || ||||||| | || ||||||||  |||||||||||||||    
T  7946024 ggtaggcttcaaaaggctcacgttaccaaacacttt-gccttactgtgtgtatgacaa-gaccaatcaataatagagaaacaacacaagttctagaaatg 7946121  T
Q  204 tagttgcacggaaca 218  Q
    |||||| | ||||||    
T  7946122 tagttgtatggaaca 7946136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 32111558 - 32111337
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  32111558 ctaaaagtccctaggctcaatatgtagtttgtcaccgaacaaaaatatctaaacctaccggctcaaataggctttcataaaggataaattcaatcaaaat 32111459  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||||||| |||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  32111458 cagggtaggcttgaaagggctcacatgaccaatcactttttccttagtgtgtatatgacaaagatcaatcaacagtcaagaaataatgtaagttctagaa 32111359  T
Q  201 atgtagttgcacggaacactct 222  Q
    || |||||||||||||||||||    
T  32111358 atttagttgcacggaacactct 32111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21632852 - 21632636
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||| |||||   ||||    
T  21632852 ctaaaagtctctaggctaaatatgtagtttgtcaccgaacaaaaagatctaaacataccggctcaatttgtctttcaaaaaggataatttcaaattaaat 21632753  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||    
T  21632752 aagggtaggcttcaaa-ggctcacaggaccaagcactttcgcctcaatgtgtaaatgacaaagaccaatcaataataaagaaacaatgcaagttctagaa 21632654  T
Q  201 atgtagttgcacggaaca 218  Q
    ||||||||||||||||||    
T  21632653 atgtagttgcacggaaca 21632636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25978619 - 25978399
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| || ||   ||||    
T  25978619 ctaaaagtctctaggctaaatatgtagtttgtcaccgaacaaaaagatctaaacctatcggctcaatttggctttcaaaaaggataattttaaattaaat 25978520  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
     ||||||||||| ||| |||||||| || |||||||||| |||||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  25978519 aagggtaggcttcaaa-ggctcacatgatcaagcactttcgcctcagtgtgtaaatgacaaagaccaatcaacaataaagaaacaatgcaagttctagaa 25978421  T
Q  201 atgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||||    
T  25978420 atgtagttgcacggaacactct 25978399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7836498 - 7836277
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaaa 99  Q
    ||||||||||||||||| || || ||| |||||||||||||||  |||||||||| |||||||||||||||| ||||||||||||| ||| |||| |||     
T  7836498 ctaaaagtctctaggcttaagatttagtttgtcaccgaacaaag-gatctaaaccgaccggctcaaattggctttcaaaaaggatatatttcaattaaac 7836400  T
Q  100 ttagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctaga 199  Q
    | ||||||||||| |||||||| |||  ||||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7836399 taagggtaggcttcaaaaggcttacaacaccaaccacttttgtctcagtgtgaatatgacaaagatcaatcaacagtaaagaaacaatgaaagttctaga 7836300  T
Q  200 aatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||||    
T  7836299 aatgtagttgcacggaacactct 7836277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 23841248 - 23841442
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattca-aaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||  || | ||||||||||| |  ||||||| || ||||||||||| |||||||||||     
T  23841248 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttgg--ttaagaaaaggataaaatatcaatcaacatcagggtaggcttcaaaaggctcacg 23841345  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23841346 ggaccaaacacttttgcctcagtgtgtatatgacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtagatgcatggaacactct 23841442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 18139656 - 18139850
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||| ||||||||||||||||||||||| || ||||| |   ||||||||||| |  |||| || || ||||||||||| |||||||||||||    
T  18139656 ttgtcaccgaataaaaagatctaaacctaccggcttaatttggc-taagaaaaggataaaatatcaattaacatcagggtaggcttcaaaaggctcacag 18139754  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  18139755 gaccaaacacttttgcctcagtgtgtatatgacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtagatgcatgaaacactct 18139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 22959431 - 22959237
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||| |  |||| || || ||||||||||| |||| ||||||||    
T  22959431 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taagaaaaggataaaatatcaattaacatcagggtaggcttcaaaaagctcacag 22959333  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| |||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22959332 gaccaagtacttttgcctcagtgtttatctgacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtagatgcatggaacactct 22959237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 23828961 - 23829155
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaatt--caatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||| |  |||| || || ||||||||||| |||| ||||||||    
T  23828961 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taagaaaaggataaaatatcaattaacatcagggtaggcttcaaaaagctcacag 23829059  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| |||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23829060 gaccaagtacttttgcctcagtgtttatctgacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtagatgcatggaacactct 23829155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 220
Target Start/End: Complemental strand, 14968058 - 14967866
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaa-aggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcaca 125  Q
    ||||||||||||||||||||||| |||||||||||||| ||||  || |||| | ||||||  |||||| ||||| ||||||||||| ||||||||||||    
T  14968058 ttgtcaccgaacaaaaagatctagacctaccggctcaatttgg--ttaaaaagatgataaaatttcaattaaaatcagggtaggcttcaaaaggctcaca 14967961  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacact 220  Q
     |||||||||||||||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||| ||||||||||  |||| ||||||||    
T  14967960 tgaccaagcacttttgcctcagtgtgtatataacaaagatcaatcgatagtaaagaaacaatgcaagttttagaaatgtaaatgcatggaacact 14967866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11127293 - 11127497
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaa-gatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaa 97  Q
    ||||||||||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||| |||||||  ||||||||||||| |  || | | ||    
T  11127293 ctaaaagtctctaggcttaatatgtagctggtcaccaaacaaaaaggatctaaacctaccggctaaaattggttttcaaaaaggatatattttaattaaa 11127392  T
Q  98 aattagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttcta 197  Q
    ||| ||||||||||| |||||||||  |||| |||||| |||||||||| ||||   |||||||||||||||| ||||||||||||||| ||||||||||    
T  11127393 aatcagggtaggcttcaaaaggctcgaaggaacaagcatttttgcctcagtgtgctaatgacaaagatcaatcgacagtaaagaaacaacgcaagttcta 11127492  T
Q  198 gaaat 202  Q
    |||||    
T  11127493 gaaat 11127497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 12745229 - 12745034
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||||||||  ||||||  |  |  | | ||||||| |||| ||||||||    
T  12745229 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataattattcaaataggaacacgataggcttcaaaaaggctcaca 12745131  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  12745130 ggaccaatcacttttgcctcagtgtgtatataacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtaaatgcatggaacactct 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 28109342 - 28109536
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |  ||| || |||||  |||||| | ||| |||| |||||| ||||||||||||     
T  28109342 ttgtcaccgaacaaaaagatctaaatctaccggctcaatttggc-taaaaagagtataaaatttcaat-ataatcagggaaggcttcaaaaggctcacat 28109439  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaag-aaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||| |||||| |||| |||||| || ||| |||||||||||||||||||||| | || ||||||||||    
T  28109440 gaccaagcacttttgcctcagtgtgtatatgataaagatgaatcgacagtagagaaaaaaatgcaagttctagaaatgtagattcatggaacactct 28109536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 23380574 - 23380768
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |  | ||| |||||   |||||  || |  ||||||||||| |||| ||||||||    
T  23380574 ttgtcaccgaacaaaaagatctaaacctatcggctcaaattggc-taaagaaaagataatatttcaaataataacagggtaggcttcaaaaaggctcaca 23380672  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  23380673 ggaccaagcacttttgcctcagtgtgtatatgac-aagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 23380768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 24408806 - 24408617
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa-ttcaatcaaaattagggtaggcttgaaaa-ggctcacag 126  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |  | |||||||||| ||| || | ||| ||||||||||| |||| ||||||||     
T  24408806 ttgtcaccgaagaaaaagatctaaacctaccggctcaaattggc-taaagaaaggataaaattccat-ataatcagggtaggcttcaaaaaggctcacat 24408709  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaaca 218  Q
    |||||||||||||||||||| ||||   |||||||||||||||  |||||| ||||| | |||||||||||||||||||  |||| ||||||    
T  24408708 gaccaagcacttttgcctcagtgtgctaatgacaaagatcaattgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaaca 24408617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 12981916 - 12982110
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  ||| |||||||   |||||  | ||| ||||||||||| |||| |||||| |    
T  12981916 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaaaagaggataacatttcaaatataatcagggtaggcttcaaaaaggctca-a 12982013  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||| |||||||||| ||||   |||||||||||||||| ||| || ||||| | |||||||||||||||||||| ||||  |||||||||    
T  12982014 ggaccaagcaattttgcctcagtgtgctaatgacaaagatcaatcgacaatagagaaaaattgcaagttctagaaatgtagatgcatagaacactct 12982110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 25455890 - 25455747
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggata--aattcaatcaaaattagggtaggctt-gaaaaggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  ||| ||||||  | |||||  | ||| | |||||||||  ||||||||||||    
T  25455890 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaaaagaggataacatttcaaatataatcatggtaggcttcaaaaaggctcaca 25455792  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatc 170  Q
     ||||||||||||||| |||| ||||   ||||||||||||||||    
T  25455791 tgaccaagcacttttgtctcagtgtgctaatgacaaagatcaatc 25455747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9021 - 8810
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa-ttcaatcaaaa 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| | ||    
T  9021 ctaaaagtctctaggctcaatatgtagcttgtcaccgaacaaaaagatctaaacctaccggctcaatttggctttcaaaaaggataaatttcaattagaa 8922  T
Q  100 ttagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctaga 199  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||           ||||||||||||||||||    
T  8921 tcagggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgggtatatgacaaagatcaatc-----------aacaatgcaagttctaga 8833  T
Q  200 aatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||||    
T  8832 aatgtagttgcacggaacactct 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 26061492 - 26061681
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaattcaatcaaaat 100  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  26061492 ctaaaagtctctaggctcaatatgtcgtttgtcaccgaacaaaaagatctaaacctaccggttcaaattggctttcaaaaaggataaattcaatcaaaat 26061591  T
Q  101 tagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgca 190  Q
     | |||||||||||| || |||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||    
T  26061592 caaggtaggcttgaatagactcacatgaccaagcacttttgcctcagtctatatatgacaaagatcaatcaacagtaaagaaacaatgca 26061681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 49638216 - 49638410
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |  ||| | ||||||  |||||| ||||| ||||||||||| |||||||||||||    
T  49638216 ttgtcaccgaacaaaaagatctagacctaccggctcaatttggc-taaaaagaagataaaatttcaattaaaatcagggtaggcttcaaaaggctcacag 49638314  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||  |||| ||||||||||    
T  49638315 gaccaagcacttttgcctcagtgtgtatataacaaagatcaatcgacagtaaagaaacaatgcaagttttagaaatgtaaatgcatggaacactct 49638410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 39500152 - 39499960
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||||||||   |||||| ||||| ||||||||||| |||||||||||||    
T  39500152 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataatatttcaat-aaaatcagggtaggcttcaaaaggctcacag 39500055  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||  | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  39500054 gaccaagcacttttgcctcagtgtgtatatgac-aagatcaatcgacaacagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 39499960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 19826044 - 19825850
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||   |||||  || |  ||||||||||| |||| ||||||||    
T  19826044 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaagataatatttcaaataataacagggtaggcttcaaaaaggctcaca 19825947  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   ||||||||||| |||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  19825946 ggaccaagcacttttgcctcagtgtgctaatgacaaagattaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 19825850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 5672284 - 5672090
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||  | |||||||||||   |||||  || |  | ||||||||| |||| ||||||||    
T  5672284 ttgtcactgaacaaaaatatctaaacctaccggctcaaattggc--taaaaaaggataatatttcaaataataaaaaggtaggcttcaaaaaggctcaca 5672187  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||||||  | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  5672186 ggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcaacaaaagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 5672090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 15432746 - 15432941
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |  | |||||||||  ||||||  | ||  ||||||||||| |||| ||||||||    
T  15432746 ttgtcaccgaacaaaaagatctaaacataccggctcaatttggc-taaagaaaggataattattcaaatataaacagggtaggcttcaaaaaggctcaca 15432844  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||| ||||||||||||| ||||   |||||||||||||||| ||| || ||||| | |||||||||||||||||||  |||| |||| |||||    
T  15432845 ggaccaaacacttttgcctcagtgtgctaatgacaaagatcaatcgacaatagagaaaaattgcaagttctagaaatgtaaatgcatggaaaactct 15432941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 15161618 - 15161441
Alignment:
Q  29 ttgtcacc-gaacaaaaag-atctaaacctaccggctcaaattggcattcaaaaaggataaatt-caatcaaaattagggtaggcttgaaaaggctcaca 125  Q
    |||||||| |||||||||| |||||||||||||| ||||| ||||  | ||||||||||||||| |||  ||||| | ||||||||| ||| ||||||||    
T  15161618 ttgtcacctgaacaaaaaggatctaaacctaccgtctcaatttggtttgcaaaaaggataaatttcaaataaaatcaaggtaggcttcaaa-ggctcaca 15161520  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgta 205  Q
     ||||||||||||| |||||| ||| || |||||| ||| || |||||||||||||||||||||||||| ||||||||||    
T  15161519 tgaccaagcacttt-gcctcagtgtataaatgacatagaccattcaacagtaaagaaacaatgcaagttgtagaaatgta 15161441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 27678708 - 27678902
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaagg-ctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||   |||||  |  |  | ||||||||| |||| | ||||||    
T  27678708 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaacggataatatttcaaatactaacatggtaggcttcaaaaagactcaca 27678805  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
     |||||||||||||||||||| ||||   |||||||||||||||| ||| || ||||| | |||||||||||||||||||  |||| ||||||||||    
T  27678806 tgaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacaatagagaaagattgcaagttctagaaatgtaaatgcatggaacactct 27678902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 56197255 - 56197060
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||| |||||||||||| |||||| ||||| |  | |||||||||  ||||||| | ||  |  |||||||| |||| ||||||||    
T  56197255 ttgtcaccgaacaaaaagttctaaacctaccagctcaatttggc-taaagaaaggataattattcaattataaacattgtaggcttcaaaaaggctcaca 56197157  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||| || | ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  56197156 ggaccaagcacttttgtcttagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 56197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 3799543 - 3799720
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggata--aattcaatcaaaattagggtaggctt-gaaaaggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||  | |||||  || |  |||||||||||  ||||||||||||    
T  3799543 ttgtcaccgaacaaaaagatctaaacctaccggctcaaatttgc--taaaaaaggataatatttcaaataataacagggtaggcttcaaaaaggctcaca 3799640  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgta 205  Q
     |||||| ||||||||| | | ||||   |||| ||||||||||| |||||| ||||| | |||||||||||||||||||    
T  3799641 tgaccaaacacttttgctttagtgtgctaatgataaagatcaatcgacagtagagaaaaattgcaagttctagaaatgta 3799720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 19861910 - 19862105
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc-attcaaaaaggataaa-ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||| || ||||| |   |||| ||||||| || |||  |||  ||||||||||| |||| || |||||    
T  19861910 ttgtcaccgaacaaaaagatctaaacctaccggctaaatttggctaaagaaaagggataaaatttaatataaac-agggtaggcttcaaaaaggttcaca 19862008  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||| | ||||||||| |||| ||||   ||||||| |||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  19862009 ggactaggcacttttgtctcagtgtgctaatgacaatgatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 19862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 22091650 - 22091705
Alignment:
Q  167 aatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||| || ||||| |  |||||||||||||||||||||||| ||||||||||    
T  22091650 aatcaacaatagagaaaaatcgcaagttctagaaatgtagttgcatggaacactct 22091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 22091447 - 22091527
Alignment:
Q  7 gtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa 87  Q
    |||||||||||  || | ||| |||||| ||||||||| | |||| |||||||||||||||||| | ||  ||||||||||    
T  22091447 gtctctaggcttcatttgtagtttgtcatcgaacaaaaggctctacacctaccggctcaaattgacttttcaaaaggataa 22091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 49718127 - 49717906
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaa 98  Q
    |||||||||||||||||    || ||| | |||||||||||||||||| ||| ||||||||||||| ||||  |||||||||||||||  |||||| |||    
T  49718127 ctaaaagtctctaggcttgtaatgtagttggtcaccgaacaaaaagatataa-cctaccggctcaatttggttttcaaaaaggataaaatttcaat-aaa 49718030  T
Q  99 attagggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctag 198  Q
    || ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49718029 atcagggtagacttcaaaaggctcacaggaccaagcacttttgcctcagtgtgtatatgacaaagattaatcaacagtaaagaaacaatgcaagttctag 49717930  T
Q  199 aaatgtagttgcacggaacactct 222  Q
    |||||||| |||| ||||||||||    
T  49717929 aaatgtagatgcatggaacactct 49717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 22454986 - 22455180
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||| |  ||| |||||||   |||||  | ||| ||||||||||| |||| ||||||||    
T  22454986 ttgtcaccgaacaaaaatatccaaacctaccggctcaatttggc-taaaaagaggataacatttcaaatataatcagggtaggcttcaaaaaggctcaca 22455084  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | ||||||||||||||||||| | ||| ||||||||||    
T  22455085 ggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgta-tcgcatggaacactct 22455180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 21020097 - 21020272
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |  | |||||||||  ||||||| | ||  |||||| |||| |||| ||||||||    
T  21020097 ttgtcaccgaacaaaaagttctaaacctaccggctcaatttggc-taaagaaaggataattattcaattataaacagggtaagcttcaaaaaggctcaca 21020195  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaat 202  Q
    ||||||| ||||||||||||| ||||   |||||||| ||||||| |||||| ||||| | ||||||||||||||||    
T  21020196 ggaccaaacacttttgcctcagtgtgctaatgacaaaaatcaatcgacagtagagaaaaattgcaagttctagaaat 21020272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 45939878 - 45939765
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggata--aattcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||  | |||||| | ||| | ||||||||| |||||||| ||||    
T  45939878 ttgtcaccgaacaaaaagatttaaacctaccggctcaaattggc--taaaaaaggataatatttcaat-acaatcaaggtaggcttcaaaaggctaacag 45939782  T
Q  127 gaccaagcacttttgcc 143  Q
    |||||||||||||||||    
T  45939781 gaccaagcacttttgcc 45939765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 27698 - 27503
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |  | |||||||||  ||||||  |  | |||||||||||| |||| |||||| |    
T  27698 ttgtcaccgaacaaaaagatctaaacctaccagctcaatttggc-taaagaaaggataattattcaaatatgaatagggtaggcttcaaaaaggctcata 27600  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  27599 ggaccaagcacttttgcctcagtgtgtatataacaaagatcaatcgacagtaaagaaacaatgcaagttctagaaatgtaaatgcatggaacactct 27503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 1802 - 1995
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||| |  | ||||||||||  |||||| | ||| ||||||||||| |||||||||||||    
T  1802 ttgtcaccaaactaaaagatctaaacctaccgactcaaattggc-taaagaaaggataaaatttcaat-acaataagggtaggcttcaaaaggctcacag 1899  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  1900 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 1995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 31429170 - 31429363
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||| |||||  |||||  | ||| |||||||| || |||||||||||||    
T  31429170 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaagaataaaatttcaaa-acaatcagggtaggtttcaaaaggctcacag 31429267  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  31429268 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 31429363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 16789159 - 16789352
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  | |||| |||||  |||||  | ||| |||||||| || |||||||||||||    
T  16789159 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaagaataaaatttcaaa-acaatcagggtaggtttcaaaaggctcacag 16789256  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||| || |||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||  |||| ||||||||||    
T  16789257 gaccaaacatttttgcctcagtgtgtatatgacaaagatcaatcgacagtagagaaaaaatgcaagttctagaaatgtaaatgcatggaacactct 16789352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 13973558 - 13973747
Alignment:
Q  33 caccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacaggacc 130  Q
    |||||||||||||||||||||||||||||||||| ||||| |  | ||||||||||  |||||| | ||| ||||||||||| |||||||||||||||||    
T  13973558 caccgaacaaaaagatctaaacctaccggctcaatttggc-taaagaaaggataaaatttcaat-acaatcagggtaggcttcaaaaggctcacaggacc 13973655  T
Q  131 aagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||  | ||||| | |||||||||||||||||||  || | ||||||||||    
T  13973656 aagcacttttgcctcagtgtttatatgacaaagatcaatcgacaacagagaaaaattgcaagttctagaaatgtaaatgtatggaacactct 13973747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 25958118 - 25958311
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcacag 126  Q
    |||||| |||||||||||||||||||||| |||||||| ||||| |  | |||||||||   |||||| | ||| ||||||||||| ||||||||||||     
T  25958118 ttgtcatcgaacaaaaagatctaaacctatcggctcaatttggc-taaagaaaggataatatttcaat-acaatcagggtaggcttcaaaaggctcacaa 25958215  T
Q  127 gaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||  |||| ||||||||||    
T  25958216 gaccaagcacttttgcctcagtgtgtatatgacaaagatcaatcgacagcagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 25958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 1505052 - 1505247
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |  | |||||||||  ||||||  | ||  ||||||||||| |||| ||||||||    
T  1505052 ttgtcaccgaacaaaaagttctaaacctaccggctcaatttggc-taaagaaaggataattattcaaatataaacagggtaggcttcaaaaaggctcaca 1505150  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  1505151 ggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 1505247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 24236800 - 24236605
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc-attcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaaggctcaca 125  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |   ||||||||||||  |||||  | ||| ||||||||||| ||||||||||||    
T  24236800 ttgtcgccgaacaaaaagatctaaacctaccggctcaaattggctaaaaaaaaaggataaaatttcaaa-acaatcagggtaggcttcaaaaggctcaca 24236702  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   | |||||||||||||| ||| || ||||| | ||||||||||||||||||   |||| ||||||||||    
T  24236701 ggaccaagcacttttgcctcagtgtgctaaagacaaagatcaatcgacaatagagaaaaattgcaagttctagaaatgtgaatgcatggaacactct 24236605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 25872470 - 25872276
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaa-aaggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||   |||||  || |  ||||||||||| || ||||||||||    
T  25872470 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc--taaaaaaggataatatttcaaataataacagggtaggcttcaagaaggctcaca 25872373  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||| | ||||   | |||||||||||||  ||| || ||||| | ||||||||||||||||||| ||||| ||||||||||    
T  25872372 ggaccaagcacttttgccttagtgtgctaaagacaaagatcaatagacaatagagaaaaattgcaagttctagaaatgtaattgcatggaacactct 25872276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 45455569 - 45455374
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaagg-ctcaca 125  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |  | ||| |||||  ||||||| | ||  |||||||| || |||| | ||||||    
T  45455569 ttgtcaccgaacaaaaagttctaaacctaccggctcaatttggc-taaagaaatgataattattcaattataaacagggtaggtttcaaaaagactcaca 45455471  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||   |||| ||||||||||| || ||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  45455470 ggaccaagcacttttgcctcagtgtgctaatgaaaaagatcaatcgacggtagagaaaaattgcaagttctagaaatgtatatgcatggaacactct 45455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 9187085 - 9187280
Alignment:
Q  31 gtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcacagg 127  Q
    ||||||||||||||||||||||||||||| |||||||||| |    |||||||||||   |||||  || |  ||||||||||| |||| |||| |||||    
T  9187085 gtcaccgaacaaaaagatctaaacctaccagctcaaattgactaaaaaaaaggataatatttcaaataataacagggtaggcttcaaaaaggcttacagg 9187184  T
Q  128 accaagcacttttgcctcaatgtgtatatgacaaagatcaatcaac-agtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||| ||||   |||||||||||||||| || ||||  |||| | |||||||||||||||||||  |||| ||||||||||    
T  9187185 accaagcacttttgcctcagtgtgctaatgacaaagatcaatcgactagtagtgaaaaattgcaagttctagaaatgtaaatgcatggaacactct 9187280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11058326 - 11058275
Alignment:
Q  1 ctaaaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  11058326 ctaaaagtccctaggctcaatatgtagcttgtcaccgaacaaaaagatctaa 11058275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 1328 - 1523
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | || ||| |||||  ||||||  | || |||||||||||| |||| ||||||||    
T  1328 ttgtcaccgaacaaaaagatctaaacctaccggctcaatttggc-tacagaaatgataatcattcaagtataaatagggtaggcttcaaaaaggctcaca 1426  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||| |||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  1427 ggacaaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 27546 - 27328
Alignment:
Q  4 aaagtctctaggctcaatatatagcttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaatt 101  Q
    |||||||||| ||| |  || ||| ||||||||||||||||||||||||||||||| |||||| ||||| |  | ||||||||||  |||||  | |||     
T  27546 aaagtctctaagcttataatgtagtttgtcaccgaacaaaaagatctaaacctaccagctcaatttggc-taaagaaaggataaaatttcaaa-acaatc 27449  T
Q  102 agggtaggcttgaaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaa 201  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||    
T  27448 agggtaggcttcaaaaggctcacaggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaa 27349  T
Q  202 tgtagttgcacggaacactct 222  Q
    | ||  |||| ||||||||||    
T  27348 tataaatgcatggaacactct 27328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 14269 - 14073
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaa-aggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||    ||||| |||||   |||||  || |  ||||||||||| ||| |||||| ||    
T  14269 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggctaaaaaaaatgataatatttcaaataataacagggtaggcttcaaagaggctcgca 14170  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||    |||||| |||||||  ||| || ||||| | |||||||||||||||||||  |||| ||||||||||    
T  14169 ggaccaagcacttttgcctcagtgtgctagtgacaacgatcaattgacaatagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 14073  T

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Target: scaffold0520 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 10780 - 10975
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||||   |||||  || |  ||||||||||| |||| ||||||||    
T  10780 ttgtcaccgaacaaaaagatctaaacctaccggctcagattagc-taaaaaaaggataatatttcaaataataacagggtaggcttcaaaaaggctcaca 10878  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    |||||||||||||||||||||   |||  |||||||||||||||| | |||| ||||| | ||||||||||||||||| |  |||| ||||||||||    
T  10879 ggaccaagcacttttgcctcagcctgttaatgacaaagatcaatcgatagtagagaaaaattgcaagttctagaaatgaaaatgcatggaacactct 10975  T

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Target: scaffold0036 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 111658 - 111853
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| |  ||| |||||||   |||||  | ||  ||||||||||| |||| ||||||||    
T  111658 ttgtcaccgaacaaaaagatctaaacctatcggctcaatttggc-taaaaagaggataacatttcaaatataaacagggtaggcttcaaaaaggctcaca 111756  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
     |||||| ||||||||||||||||||   |||||||||||||||| |||||| ||||| | |||||||| ||||||||||  |||| ||||||||||    
T  111757 tgaccaatcacttttgcctcaatgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttatagaaatgtaaatgcatggaacactct 111853  T

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Target: scaffold0321 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 4586 - 4778
Alignment:
Q  33 caccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcacaggac 129  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||   |||||  || |  |||| |||||| |||| || | |||| ||    
T  4586 caccgaacaaaaagatctaaacctaccggctcaaattggctaaaaaaaaggataatatttcaaataataacagggaaggcttcaaaaaggataacagaac 4685  T
Q  130 caagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||| ||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| ||||||||||    
T  4686 caaacacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatggaacactct 4778  T

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Target: scaffold0084 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 27751 - 27556
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataaa--ttcaatcaaaattagggtaggcttgaaaa-ggctcaca 125  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |  |||||||||||   |||||  || |  ||||||||||| |||| ||||||||    
T  27751 ttgtcaccgaacgaaaagatctaaacataccggctcaaattggc-taaaaaaaggataatatttcaaataataacagggtaggcttcaaaaaggctcaca 27653  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||||||||||||||||| ||||    |||||| |||||||  ||| || ||||| | |||| ||||||||||||||  |||| ||||||||||    
T  27652 ggaccaagcacttttgcctcagtgtgctagtgacaacgatcaattgacaatagagaaaaattgcatgttctagaaatgtaaatgcatggaacactct 27556  T

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Target: scaffold0037 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 96998 - 97106
Alignment:
Q  114 aaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacg 213  Q
    ||||||||||||||||||| ||||||||||||| ||||   |||||||||||||||| |||||| ||||| | |||||||||||||||||||  |||| |    
T  96998 aaaaggctcacaggaccaaacacttttgcctcagtgtgctaatgacaaagatcaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatg 97097  T
Q  214 gaacactct 222  Q
    |||||||||    
T  97098 gaacactct 97106  T

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Target: scaffold0214 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 21693 - 21594
Alignment:
Q  102 agggtaggcttgaaaa-ggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaa 200  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| ||||   |||||||||||||||| ||| || ||||||||||||||||||||||    
T  21693 agggtaggcttcaaaaaggctcacaggaccaagcacttttgcctcagtgtgctaatgacaaagatcaatcgacaatagagaaacaatgcaagttctagaa 21594  T

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Target: scaffold0214; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 11959 - 11916
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggc 72  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  11959 ttgttaccgaacaaaaagatctagacctaccggctcaaattggc 11916  T

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Target: scaffold0214; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 25982 - 25940
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattgg 71  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  25982 ttgttaccgaacaaaaagatctagacctaccggctcaaattgg 25940  T

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Target: scaffold0035 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 61517 - 61322
Alignment:
Q  29 ttgtcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggataa--attcaatcaaaattagggtaggcttgaa-aaggctcaca 125  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| |  | |||||||||  || |||  | || |||||||||||| || ||||||||||    
T  61517 ttgtcaccgaacaaaaagttctaaacctaccggctcagtttggc-taaagaaaggataattatacaaatataaatagggtaggcttcaagaaggctcaca 61419  T
Q  126 ggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacggaacactct 222  Q
    ||||||  ||||||||||||  ||||   |||||||||||||||| || ||| ||||| | ||||||||||| |||||||  |||| ||||||||||    
T  61418 ggaccatacacttttgcctcggtgtgctaatgacaaagatcaatcgacggtagagaaaaattgcaagttctataaatgtaaatgcatggaacactct 61322  T

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Target: scaffold0034 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 50050 - 50199
Alignment:
Q  32 tcaccgaacaaaaagatctaaacctaccggctcaaattggcattcaaaaaggata-aattcaatcaaaattagggtaggcttgaaaaggctcacaggacc 130  Q
    |||||||||||||||||||||||||||| ||| || || |  ||||||| ||||| || ||||| |||| |||||||||||| ||||||||| || ||||    
T  50050 tcaccgaacaaaaagatctaaacctaccagcttaagttcgttttcaaaatggatataaatcaattaaaa-tagggtaggcttcaaaaggctcgcatgacc 50148  T
Q  131 aagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaa 183  Q
    |||||||||| ||| | |||||  ||||| |||| |||||||||| |||||||    
T  50149 aagcactttt-ccttagtgtgtgaatgac-aagaccaatcaacagaaaagaaa 50199  T

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Target: scaffold0043 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 12932 - 12824
Alignment:
Q  114 aaaaggctcacaggaccaagcacttttgcctcaatgtgtatatgacaaagatcaatcaacagtaaagaaacaatgcaagttctagaaatgtagttgcacg 213  Q
    |||||||||||||||| ||||||||||| || | ||||    |||||||||| |||| |||||| ||||| | |||||||||||||||||||  |||| |    
T  12932 aaaaggctcacaggacgaagcacttttgtcttagtgtgctactgacaaagattaatcgacagtagagaaaaattgcaagttctagaaatgtaaatgcatg 12833  T
Q  214 gaacactct 222  Q
    |||||||||    
T  12832 gaacactct 12824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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