View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21289_high_1 (Length: 773)

Name: NF21289_high_1
Description: NF21289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21289_high_1
NF21289_high_1
[»] chr8 (45 HSPs)
chr8 (172-491)||(31519771-31520088)
chr8 (169-479)||(8885344-8885652)
chr8 (169-491)||(27927820-27928140)
chr8 (169-491)||(44106183-44106503)
chr8 (172-488)||(21004353-21004661)
chr8 (169-475)||(42280786-42281093)
chr8 (172-479)||(3094644-3094953)
chr8 (169-491)||(34853290-34853608)
chr8 (169-491)||(28916743-28917055)
chr8 (169-489)||(9073464-9073782)
chr8 (172-403)||(37248521-37248750)
chr8 (222-402)||(40994805-40994983)
chr8 (173-403)||(16310563-16310791)
chr8 (306-491)||(36165716-36165902)
chr8 (306-491)||(11698195-11698380)
chr8 (306-479)||(14163948-14164121)
chr8 (306-491)||(17119758-17119943)
chr8 (306-490)||(40392631-40392815)
chr8 (329-490)||(40328015-40328176)
chr8 (331-489)||(36980689-36980847)
chr8 (314-478)||(1076659-1076822)
chr8 (308-479)||(4259528-4259697)
chr8 (306-487)||(36317887-36318072)
chr8 (169-292)||(36404231-36404353)
chr8 (313-475)||(28423523-28423684)
chr8 (313-491)||(6395186-6395364)
chr8 (169-292)||(41530629-41530754)
chr8 (195-278)||(35676628-35676711)
chr8 (311-479)||(8621528-8621697)
chr8 (354-479)||(34645520-34645645)
chr8 (203-269)||(11698385-11698451)
chr8 (305-463)||(39093602-39093760)
chr8 (311-403)||(7982478-7982570)
chr8 (334-402)||(31234486-31234554)
chr8 (306-410)||(33472166-33472270)
chr8 (306-410)||(33472373-33472477)
chr8 (334-417)||(10833468-10833551)
chr8 (172-292)||(7971072-7971193)
chr8 (348-417)||(9845323-9845392)
chr8 (315-478)||(7981618-7981781)
chr8 (310-410)||(10840717-10840817)
chr8 (306-391)||(9845488-9845573)
chr8 (354-398)||(24627717-24627761)
chr8 (201-243)||(10840881-10840923)
chr8 (348-398)||(41530812-41530862)
[»] chr1 (46 HSPs)
chr1 (172-491)||(33611289-33611606)
chr1 (172-491)||(18583423-18583740)
chr1 (174-491)||(23442703-23443018)
chr1 (172-491)||(49786232-49786548)
chr1 (169-424)||(32817557-32817810)
chr1 (195-491)||(34162600-34162894)
chr1 (177-479)||(45046741-45047041)
chr1 (169-491)||(42545928-42546248)
chr1 (169-479)||(15069732-15070041)
chr1 (172-479)||(41584556-41584866)
chr1 (178-489)||(40650556-40650865)
chr1 (204-491)||(49677478-49677763)
chr1 (169-479)||(7011169-7011478)
chr1 (169-491)||(40907813-40908133)
chr1 (172-491)||(17000342-17000659)
chr1 (169-446)||(44573021-44573295)
chr1 (169-491)||(45567769-45568076)
chr1 (195-491)||(28866509-28866803)
chr1 (196-491)||(34006246-34006541)
chr1 (308-491)||(52744722-52744905)
chr1 (202-491)||(26723367-26723649)
chr1 (201-381)||(32542388-32542563)
chr1 (169-479)||(38885199-38885481)
chr1 (305-489)||(27794925-27795108)
chr1 (172-487)||(6223634-6223934)
chr1 (308-491)||(24472706-24472889)
chr1 (307-479)||(3561226-3561398)
chr1 (169-292)||(43319271-43319395)
chr1 (307-479)||(42928980-42929152)
chr1 (348-490)||(25563294-25563436)
chr1 (201-292)||(30829541-30829632)
chr1 (201-292)||(24471389-24471481)
chr1 (169-248)||(52744937-52745016)
chr1 (306-401)||(890609-890704)
chr1 (306-417)||(9446048-9446159)
chr1 (226-292)||(38950286-38950353)
chr1 (201-292)||(800877-800969)
chr1 (334-410)||(9445846-9445922)
chr1 (172-248)||(27794818-27794893)
chr1 (305-416)||(26230145-26230256)
chr1 (434-487)||(890748-890801)
chr1 (334-410)||(43318940-43319016)
chr1 (347-410)||(800552-800615)
chr1 (384-479)||(45880000-45880095)
chr1 (201-239)||(9446183-9446221)
chr1 (203-248)||(24472950-24472995)
[»] chr7 (48 HSPs)
chr7 (172-491)||(47202457-47202767)
chr7 (190-490)||(8154880-8155178)
chr7 (172-490)||(3304638-3304955)
chr7 (169-491)||(3936068-3936388)
chr7 (172-489)||(31643004-31643318)
chr7 (174-491)||(36468416-36468730)
chr7 (169-459)||(28230379-28230666)
chr7 (172-479)||(42925531-42925837)
chr7 (172-491)||(36629168-36629483)
chr7 (164-488)||(36408325-36408648)
chr7 (169-491)||(19225477-19225798)
chr7 (168-489)||(9151773-9152074)
chr7 (172-410)||(24042148-24042384)
chr7 (202-491)||(33573922-33574200)
chr7 (169-432)||(37518233-37518494)
chr7 (310-491)||(42864981-42865162)
chr7 (169-475)||(33151167-33151467)
chr7 (203-487)||(31985400-31985685)
chr7 (169-291)||(43737084-43737207)
chr7 (306-479)||(1518802-1518975)
chr7 (311-488)||(24690215-24690393)
chr7 (547-716)||(18657990-18658162)
chr7 (331-479)||(19818500-19818648)
chr7 (308-491)||(36946171-36946353)
chr7 (366-479)||(43737237-43737350)
chr7 (195-489)||(7115151-7115444)
chr7 (305-448)||(5278358-5278501)
chr7 (169-264)||(42877149-42877244)
chr7 (312-490)||(6467020-6467198)
chr7 (399-487)||(26555040-26555128)
chr7 (306-439)||(16983673-16983806)
chr7 (313-479)||(48776100-48776268)
chr7 (179-352)||(6467665-6467839)
chr7 (306-401)||(48775705-48775798)
chr7 (384-490)||(37398771-37398877)
chr7 (308-470)||(48705899-48706061)
chr7 (316-425)||(43185887-43185996)
chr7 (195-278)||(26555131-26555214)
chr7 (312-491)||(39581840-39582019)
chr7 (306-403)||(8214257-8214354)
chr7 (348-409)||(8214462-8214523)
chr7 (418-491)||(37518142-37518215)
chr7 (169-225)||(28349227-28349283)
chr7 (201-236)||(37218237-37218272)
chr7 (195-229)||(28349192-28349226)
chr7 (730-759)||(21123081-21123110)
chr7 (208-296)||(24690405-24690494)
chr7 (178-235)||(28346116-28346173)
[»] chr3 (54 HSPs)
chr3 (172-491)||(2358501-2358819)
chr3 (172-487)||(47301982-47302294)
chr3 (172-491)||(50716215-50716533)
chr3 (172-491)||(50796314-50796632)
chr3 (219-491)||(43472848-43473118)
chr3 (169-490)||(35142037-35142353)
chr3 (201-491)||(52777223-52777511)
chr3 (169-491)||(38977627-38977947)
chr3 (169-491)||(47739812-47740131)
chr3 (172-479)||(3902697-3903002)
chr3 (169-490)||(3351946-3352266)
chr3 (197-491)||(34821222-34821514)
chr3 (172-491)||(28872966-28873286)
chr3 (178-459)||(51540525-51540804)
chr3 (194-479)||(501032-501315)
chr3 (169-491)||(39149770-39150089)
chr3 (176-479)||(46622686-46622977)
chr3 (169-479)||(51258363-51258672)
chr3 (176-395)||(3937355-3937563)
chr3 (173-421)||(33438486-33438731)
chr3 (169-491)||(49096105-49096425)
chr3 (203-490)||(30721690-30721974)
chr3 (321-479)||(47123136-47123294)
chr3 (321-479)||(47130502-47130660)
chr3 (386-491)||(3938357-3938462)
chr3 (314-487)||(5127782-5127955)
chr3 (305-477)||(40062473-40062645)
chr3 (348-491)||(35345788-35345931)
chr3 (306-491)||(51492894-51493080)
chr3 (169-254)||(34821510-34821595)
chr3 (354-479)||(46624863-46624988)
chr3 (169-278)||(48303951-48304060)
chr3 (176-292)||(45244356-45244469)
chr3 (169-238)||(47123066-47123135)
chr3 (169-238)||(47130432-47130501)
chr3 (312-478)||(29048444-29048610)
chr3 (313-479)||(47979895-47980063)
chr3 (306-491)||(54229776-54229961)
chr3 (306-479)||(14828809-14828983)
chr3 (308-479)||(47769359-47769530)
chr3 (374-491)||(4300159-4300276)
chr3 (414-479)||(33439384-33439449)
chr3 (306-401)||(45712053-45712148)
chr3 (313-435)||(27143351-27143473)
chr3 (195-245)||(42936686-42936736)
chr3 (307-399)||(26053491-26053584)
chr3 (306-425)||(29035893-29036013)
chr3 (348-410)||(8735530-8735592)
chr3 (348-410)||(9087771-9087833)
chr3 (346-410)||(33842034-33842098)
chr3 (306-377)||(29035809-29035880)
chr3 (195-230)||(33700775-33700810)
chr3 (335-398)||(45244514-45244577)
chr3 (316-425)||(46555445-46555554)
[»] chr4 (56 HSPs)
chr4 (172-491)||(32441782-32442098)
chr4 (201-490)||(34972864-34973151)
chr4 (169-491)||(25491274-25491594)
chr4 (172-490)||(6228693-6229007)
chr4 (169-479)||(19835488-19835796)
chr4 (169-491)||(40703631-40703952)
chr4 (169-478)||(48318956-48319263)
chr4 (172-490)||(49396979-49397299)
chr4 (169-488)||(17933019-17933336)
chr4 (169-479)||(2505922-2506232)
chr4 (172-490)||(55052498-55052815)
chr4 (172-487)||(6003556-6003869)
chr4 (178-491)||(25752322-25752634)
chr4 (218-491)||(41412977-41413249)
chr4 (178-491)||(46440151-46440464)
chr4 (169-478)||(7931626-7931931)
chr4 (172-487)||(38536141-38536455)
chr4 (196-491)||(8106387-8106682)
chr4 (310-489)||(53893906-53894085)
chr4 (230-479)||(31582313-31582560)
chr4 (172-464)||(3703155-3703446)
chr4 (172-367)||(23523877-23524071)
chr4 (169-343)||(54631489-54631662)
chr4 (172-357)||(29822590-29822773)
chr4 (376-491)||(54631371-54631486)
chr4 (333-491)||(52089315-52089473)
chr4 (315-479)||(27742004-27742169)
chr4 (330-479)||(41322983-41323132)
chr4 (306-479)||(7863544-7863717)
chr4 (174-278)||(25539038-25539142)
chr4 (330-475)||(25538873-25539019)
chr4 (169-251)||(53894108-53894190)
chr4 (313-479)||(14474103-14474268)
chr4 (398-487)||(29822775-29822864)
chr4 (306-447)||(27879651-27879792)
chr4 (354-491)||(47456751-47456888)
chr4 (306-448)||(37222064-37222206)
chr4 (172-278)||(38416536-38416642)
chr4 (431-491)||(38417020-38417080)
chr4 (412-479)||(49001451-49001518)
chr4 (307-437)||(42497809-42497939)
chr4 (178-248)||(50392529-50392599)
chr4 (308-402)||(49002822-49002916)
chr4 (306-410)||(25140466-25140570)
chr4 (306-398)||(25140687-25140779)
chr4 (316-403)||(47784101-47784188)
chr4 (346-430)||(47873953-47874037)
chr4 (384-487)||(55838875-55838978)
chr4 (348-398)||(25140894-25140944)
chr4 (432-484)||(4936614-4936666)
chr4 (384-480)||(55774704-55774800)
chr4 (384-447)||(1788175-1788238)
chr4 (313-379)||(38416937-38417004)
chr4 (366-425)||(39118308-39118367)
chr4 (374-487)||(20078719-20078832)
chr4 (358-459)||(46381079-46381180)
[»] chr2 (39 HSPs)
chr2 (169-490)||(39447122-39447441)
chr2 (169-491)||(32187743-32188064)
chr2 (172-459)||(36948851-36949136)
chr2 (169-491)||(15994987-15995308)
chr2 (169-479)||(33452329-33452637)
chr2 (170-490)||(41510304-41510622)
chr2 (169-459)||(44465633-44465922)
chr2 (169-448)||(45153708-45153985)
chr2 (169-457)||(17474707-17474993)
chr2 (201-491)||(41854778-41855061)
chr2 (201-491)||(42894369-42894657)
chr2 (169-479)||(25217660-25217984)
chr2 (174-491)||(5507381-5507699)
chr2 (201-479)||(36874977-36875253)
chr2 (195-491)||(41203060-41203354)
chr2 (174-479)||(34517066-34517369)
chr2 (312-488)||(19109892-19110068)
chr2 (307-476)||(16750318-16750485)
chr2 (306-469)||(8388746-8388909)
chr2 (185-297)||(4268303-4268416)
chr2 (313-479)||(35251032-35251198)
chr2 (366-489)||(30763804-30763927)
chr2 (314-491)||(42478846-42479023)
chr2 (169-292)||(9847495-9847619)
chr2 (358-491)||(38308706-38308840)
chr2 (313-487)||(45293743-45293916)
chr2 (201-278)||(33366920-33366996)
chr2 (202-395)||(38066643-38066834)
chr2 (305-475)||(26228160-26228330)
chr2 (354-480)||(37773700-37773827)
chr2 (203-277)||(38308880-38308954)
chr2 (348-410)||(17766784-17766846)
chr2 (414-487)||(13704690-13704763)
chr2 (169-271)||(25715323-25715427)
chr2 (345-399)||(9847386-9847440)
chr2 (348-410)||(34519492-34519554)
chr2 (438-479)||(27670723-27670764)
chr2 (414-479)||(38065463-38065528)
chr2 (348-410)||(9847167-9847229)
[»] chr5 (63 HSPs)
chr5 (178-491)||(20891544-20891855)
chr5 (178-479)||(38871602-38871901)
chr5 (172-479)||(15799150-15799455)
chr5 (174-479)||(6156658-6156961)
chr5 (169-491)||(38692662-38692982)
chr5 (169-479)||(39524698-39525006)
chr5 (172-491)||(4064598-4064916)
chr5 (169-479)||(28083269-28083577)
chr5 (172-491)||(33487535-33487853)
chr5 (203-491)||(31221218-31221504)
chr5 (172-491)||(12464998-12465302)
chr5 (169-491)||(15957672-15957991)
chr5 (195-479)||(32841861-32842145)
chr5 (173-405)||(26190263-26190493)
chr5 (173-479)||(37183672-37183977)
chr5 (169-491)||(38372231-38372543)
chr5 (171-490)||(40619865-40620187)
chr5 (169-490)||(24203564-24203879)
chr5 (217-490)||(29862582-29862854)
chr5 (175-392)||(25746954-25747168)
chr5 (306-491)||(7884250-7884435)
chr5 (169-491)||(31929004-31929304)
chr5 (172-479)||(27212633-27212934)
chr5 (326-491)||(14111944-14112107)
chr5 (203-491)||(26095047-26095334)
chr5 (306-491)||(12847500-12847685)
chr5 (306-479)||(13908605-13908778)
chr5 (172-292)||(37094991-37095110)
chr5 (172-292)||(26319043-26319163)
chr5 (306-491)||(23269391-23269579)
chr5 (309-479)||(27158144-27158314)
chr5 (383-479)||(26898694-26898790)
chr5 (201-292)||(34440688-34440779)
chr5 (201-291)||(14111851-14111942)
chr5 (306-489)||(40613556-40613739)
chr5 (306-475)||(41639385-41639557)
chr5 (195-296)||(8032219-8032321)
chr5 (312-417)||(21070429-21070534)
chr5 (305-417)||(8738938-8739050)
chr5 (169-292)||(36359661-36359784)
chr5 (313-479)||(6800818-6800984)
chr5 (425-491)||(26190201-26190267)
chr5 (306-400)||(27494123-27494217)
chr5 (384-490)||(33901094-33901200)
chr5 (306-410)||(16429339-16429443)
chr5 (305-421)||(26093502-26093618)
chr5 (306-489)||(26622170-26622350)
chr5 (201-292)||(38640676-38640767)
chr5 (308-410)||(8739148-8739250)
chr5 (306-390)||(1350290-1350374)
chr5 (308-479)||(41253359-41253530)
chr5 (348-410)||(28445169-28445231)
chr5 (388-469)||(7036677-7036758)
chr5 (195-248)||(34529976-34530029)
chr5 (334-401)||(34530300-34530367)
chr5 (348-410)||(8973569-8973631)
chr5 (174-216)||(28108308-28108350)
chr5 (201-394)||(28445381-28445578)
chr5 (311-448)||(11186097-11186234)
chr5 (345-417)||(16429168-16429240)
chr5 (203-241)||(11186303-11186341)
chr5 (348-398)||(38641033-38641083)
chr5 (178-248)||(43388189-43388259)
[»] chr6 (32 HSPs)
chr6 (172-491)||(17264373-17264690)
chr6 (169-478)||(14587452-14587759)
chr6 (172-489)||(4508183-4508498)
chr6 (172-491)||(23406759-23407077)
chr6 (169-479)||(3717173-3717482)
chr6 (172-491)||(2813103-2813422)
chr6 (172-491)||(5699521-5699846)
chr6 (170-477)||(1945423-1945727)
chr6 (226-487)||(5638879-5639138)
chr6 (178-470)||(24604261-24604552)
chr6 (176-369)||(32035080-32035266)
chr6 (169-297)||(7412788-7412916)
chr6 (256-479)||(2539498-2539719)
chr6 (344-491)||(21514910-21515057)
chr6 (306-489)||(29519374-29519557)
chr6 (195-488)||(9905104-9905392)
chr6 (306-479)||(13800918-13801091)
chr6 (306-475)||(7734221-7734390)
chr6 (366-467)||(32044537-32044638)
chr6 (329-489)||(34528558-34528718)
chr6 (308-491)||(29289504-29289687)
chr6 (172-297)||(33413417-33413542)
chr6 (313-488)||(6704009-6704183)
chr6 (306-490)||(14037845-14038026)
chr6 (316-487)||(236899-237069)
chr6 (352-478)||(16450355-16450481)
chr6 (448-491)||(33413365-33413408)
chr6 (354-479)||(3365808-3365933)
chr6 (169-277)||(21517572-21517670)
chr6 (374-490)||(10310311-10310427)
chr6 (348-399)||(17501003-17501054)
chr6 (432-489)||(7412971-7413028)
[»] scaffold0027 (1 HSPs)
scaffold0027 (169-491)||(141843-142161)
[»] scaffold0137 (1 HSPs)
scaffold0137 (172-487)||(9380-9693)
[»] scaffold0508 (1 HSPs)
scaffold0508 (169-491)||(3273-3596)
[»] scaffold0010 (2 HSPs)
scaffold0010 (346-491)||(140620-140765)
scaffold0010 (169-213)||(140568-140612)
[»] scaffold0182 (2 HSPs)
scaffold0182 (179-291)||(23092-23205)
scaffold0182 (337-410)||(23228-23301)
[»] scaffold0006 (2 HSPs)
scaffold0006 (312-475)||(59865-60028)
scaffold0006 (331-402)||(59480-59551)
[»] scaffold0202 (1 HSPs)
scaffold0202 (1-78)||(4910-4978)
[»] scaffold0564 (1 HSPs)
scaffold0564 (311-479)||(4471-4639)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-117; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 31520088 - 31519771
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||| |    
T  31520088 agggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccggattacataatccgga 31519989  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  31519988 aaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagc 31519892  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  31519891 cattttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 31519792  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||| ||||||||||    
T  31519791 ggattgctctgaaacttcccc 31519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 8885652 - 8885344
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8885652 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 8885553  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||    
T  8885552 ggaaaccccctaaacacccattttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggat 8885456  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||||||| |||||| | |||||||| ||| |||| |||||||||| ||||||||| ||||||| |||||||    
T  8885455 agtcattttagggacaatattaatcttcctaactctcatccttctgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttg 8885356  T
Q  468 atcggattgctc 479  Q
    ||||||||||||    
T  8885355 atcggattgctc 8885344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 27928140 - 27927820
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  27928140 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatca 27928041  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  27928040 ggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 27927944  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || |||||||| |||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||| || ||||||| |||||||    
T  27927943 agtcattttagagacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttg 27927844  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||| ||||||||  ||||||||||    
T  27927843 atcagattgctccgaaacttcccc 27927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 44106183 - 44106503
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44106183 taaagggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 44106282  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||    
T  44106283 ggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggat 44106379  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||  | ||||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||||||||||||| |||||| ||||||||    
T  44106380 agtcattccatggacaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttg 44106479  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||| ||||||||| ||||||||||    
T  44106480 atctgattgctctgaaacttcccc 44106503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 172 - 488
Target Start/End: Original strand, 21004353 - 21004661
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||| ||||||||||||||||    
T  21004353 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaa 21004451  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||| ||| ||||||| |||||||||||       |||||||||||||||||||||     |||||| |||||||||||||||||||||||||||||||||    
T  21004452 aactccctaaacaccattttttaaggtaaaa---tagttcggattatataatccg-----tatcagtacaaatcctaaacatatttgtaacatgtatagc 21004543  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||    
T  21004544 cattttagggacaatattaatcttcataactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatc 21004643  T
Q  471 ggattgctctaaaacttc 488  Q
     ||||||||| |||||||    
T  21004644 agattgctctgaaacttc 21004661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 169 - 475
Target Start/End: Complemental strand, 42281093 - 42280786
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat---gatgtttcccgattacataa 265  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||   ||||||||| ||||||||||    
T  42281093 taaagggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataa 42280994  T
Q  266 tccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatg 364  Q
    |||| |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| |||||||||||||||  ||||||| |||||||||||    
T  42280993 tccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatg 42280897  T
Q  365 tatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctac 464  Q
     |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||||||||||||||||| || ||||    
T  42280896 catagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactac 42280797  T
Q  465 ttgatcggatt 475  Q
    |||||||||||    
T  42280796 ttgatcggatt 42280786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 172 - 479
Target Start/End: Original strand, 3094644 - 3094953
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |    
T  3094644 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccggattacataatccgga 3094743  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnnt-agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    ||||||| ||||||| ||||| |||||         ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||     
T  3094744 aaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataa 3094843  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
     ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||  ||||||| |||||||||    
T  3094844 tcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgat 3094943  T
Q  470 cggattgctc 479  Q
    ||||||||||    
T  3094944 cggattgctc 3094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 34853290 - 34853608
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||     
T  34853290 taaagggtaagaaaatgagta-cgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatct 34853387  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||| | ||||||||||||| |||||        ||| ||||||||||||||| || ||||||||||||||| ||||| || ||||||||||| ||    
T  34853388 ggaaaccctctaaacaccctttttcaaggtaaaac---agtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggat 34853484  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||| || ||||||  |||||||  ||||||    
T  34853485 agtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttg 34853584  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  34853585 atcggattgctccgaaacttcccc 34853608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 28916743 - 28917055
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||| ||    
T  28916743 taaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaacc 28916842  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||| |||||||            | |||||||||||||||| ||||||||||||||| |||||||| ||||| ||||| ||    
T  28916843 ggaaaccccctaaacaccctttcttaaggta-----------cagattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggat 28916931  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctactt 466  Q
    || |||||||||||||||||||||||| |||||||| |||||| | |||||||||||| |||| ||||||| ||  ||||||||| ||||| | ||||||    
T  28916932 agtcattttagggacaatattaatctttctaactctcatccttctgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttc-gactactt 28917030  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  28917031 gatcggattgctccgaaacttcccc 28917055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 169 - 489
Target Start/End: Original strand, 9073464 - 9073782
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||| ||||||||||||||||  |||| |||||||  ||||||| ||||||||||||||| |   ||||||||||||||||| |||||||||||||    
T  9073464 taaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatcc 9073563  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
      |||||||| ||||||| ||||| || ||       ||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| ||    
T  9073564 agaaaccccctaaacaccttttttcaaagtgaaa---tagttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggat 9073660  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||| |||||||||||||||||||| |||| || |||||||    
T  9073661 agtcattttagggacaatattaatcttcctaagtctcatccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttg 9073760  T
Q  468 atcggattgctctaaaacttcc 489  Q
    || |||||||||  ||||||||    
T  9073761 attggattgctccgaaacttcc 9073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 172 - 403
Target Start/End: Original strand, 37248521 - 37248750
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-ga 270  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||    
T  37248521 agggtgaaaaatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccaga 37248620  T
Q  271 aaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    || |||| ||||||| ||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| ||||| ||||| ||||     
T  37248621 aaccccctaaacaccatttttcaaggtaaaac---agtttgaattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagt 37248717  T
Q  371 cattttagggacaatattaatcttcctaactct 403  Q
    |||||||||||||||||||||||||||||||||    
T  37248718 cattttagggacaatattaatcttcctaactct 37248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 222 - 402
Target Start/End: Original strand, 40994805 - 40994983
Alignment:
Q  222 ttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatata 320  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||        |||||||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaac---agttcggattatata 40994901  T
Q  321 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40994902 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 173 - 403
Target Start/End: Original strand, 16310563 - 16310791
Alignment:
Q  173 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 272  Q
    ||||||||||  |||| || |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||| ||||||| |||||  ||    
T  16310563 gggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaa 16310662  T
Q  273 accccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    || ||| ||||||||||||| |||||        |||||  ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| |||| |    
T  16310663 actccctaaacaccctttttcaaggtaaaac---agttcaaattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtc 16310759  T
Q  372 attttagggacaatattaatcttcctaactct 403  Q
    ||||||||||||||||||||||||||||||||    
T  16310760 attttagggacaatattaatcttcctaactct 16310791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 306 - 491
Target Start/End: Complemental strand, 36165902 - 36165716
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||  ||||||| |||||||||||||||| ||||||| |    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||| | |||||||||||| |||| |||||||||| ||||| | || |||| ||||||||||||||||||||||  ||||||||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttcccc 36165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 306 - 491
Target Start/End: Complemental strand, 11698380 - 11698195
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||||||||||||||| |||| |||||||||| |||| |||| ||| ||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |    
T  11698380 agttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctca 11698281  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||   |||| ||||||| |||  |||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  11698280 tccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttcccc 11698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 306 - 479
Target Start/End: Complemental strand, 14164121 - 14163948
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| |    
T  14164121 agttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctca 14164022  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| | |||| ||||||| |||| ||||||||||||||||  |  |||||||| ||||||||||| ||||||    
T  14164021 tccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctc 14163948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 306 - 491
Target Start/End: Complemental strand, 17119943 - 17119758
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| || ||||||||||| || | ||||||| ||||||||||||||||||||||||| |    
T  17119943 agttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctca 17119844  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||| | |||||| ||||| |||| |||||||||||||||| ||| ||||||| ||||||||| ||||| |||  ||||||||||    
T  17119843 tccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttcccc 17119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 306 - 490
Target Start/End: Original strand, 40392631 - 40392815
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  40392631 agttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctta 40392730  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    || || |  ||||||||||| ||| |||||||||||||||||||   |||||  |||||||||||||||| |||  |||||||||    
T  40392731 tctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 329 - 490
Target Start/End: Original strand, 40328015 - 40328176
Alignment:
Q  329 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 428  Q
    |||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| ||| || | |||||||| ||| ||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  429 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 331 - 489
Target Start/End: Original strand, 36980689 - 36980847
Alignment:
Q  331 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 430  Q
    |||||||||||||  | ||||| ||||||||||| |||  ||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| |||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  431 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
     | |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttcc 36980847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 314 - 478
Target Start/End: Original strand, 1076659 - 1076822
Alignment:
Q  314 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 413  Q
    |||||||||||||| ||||| |||||||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| ||| ||||     
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatcattttg 1076757  T
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 478  Q
    |||||  ||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  1076758 ttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgct 1076822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 479
Target Start/End: Complemental strand, 4259697 - 4259528
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    |||||||||||||||| ||| ||||||||||||||| |||| ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | |||    
T  4259697 ttcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatc 4259598  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |  || |||| | ||||| ||| |||||||||||||||| || | ||||||||||||| |||||| ||||||    
T  4259597 c--ttcttttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 306 - 487
Target Start/End: Original strand, 36317887 - 36318072
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacat----atttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
    |||||||||||||||||| ||| ||||| |||||||||  | |||||    |||||||||||| |||  ||||||| |||||||||||||||| ||||||    
T  36317887 agttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaact 36317986  T
Q  402 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    |||||| ||  ||||||||||||| |||  |||||||||||| ||||  |||||||||||||||||||||||| | || |||||||    
T  36317987 cttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactt 36318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 36404353 - 36404231
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||  ||||||||||||||| |||||||||| ||| | ||||| |||||||    
T  36404353 taaagggtgaaaaaatgagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatcc 36404255  T
Q  269 gaaaacccccaaacaccctttttt 292  Q
    |||||| || ||||||||||||||    
T  36404254 gaaaactcctaaacaccctttttt 36404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 313 - 475
Target Start/End: Original strand, 28423523 - 28423684
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||| ||| || ||||  |||||| |||||||| ||||||||||| ||   |||||||  |||||||||||||||||||||||| |||||| |    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    |||||| ||||||  || ||||||||||||||||||  | |||||||||||||||||||||||    
T  28423623 attttgcgtcatt-gtagttgttcttagtcaaaaattagtttttcgggctacttgatcggatt 28423684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 491
Target Start/End: Original strand, 6395186 - 6395364
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    |||||||||||  || ||||||||||| ||| |  ||| | |||||| |||| |||  ||||||| |||||||||||| |||||||||||| || ||| |    
T  6395186 attatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttct 6395285  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
     |||| ||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  6395286 gttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 169 - 292
Target Start/End: Original strand, 41530629 - 41530754
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga-tgtttcccgattacataatc 267  Q
    ||||||||| |||||||||| |||| |||||||| ||||||||||||| |||  ||||||||||||||||||||||||| | ||| | ||||||||||||    
T  41530629 taaagggtggaaaaatgagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatc 41530728  T
Q  268 cgaaaaccccc-aaacaccctttttt 292  Q
     ||| |||||| ||| ||||||||||    
T  41530729 tgaacaccccctaaaaaccctttttt 41530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 35676711 - 35676628
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 278  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||    
T  35676711 tttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccc 35676628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 479
Target Start/End: Complemental strand, 8621697 - 8621528
Alignment:
Q  311 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||||||| ||||| |||||||||||||||  | ||  | || |||||||| |||  ||||||| ||| |||||||||||| |||||||||||   |    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggat 8621599  T
Q  411 --ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
      | ||||| ||||||| ||| |||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  8621598 aatcattttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctc 8621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 479
Target Start/End: Original strand, 34645520 - 34645645
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 453  Q
    ||||||||||  |||| ||||||| ||| ||| ||||| || |||||||| |||||| | |||||| ||||| |||| |||||||||||||| ||| | |    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  454 tttcgggctacttgatcggattgctc 479  Q
    |||||||||||||||||  |||||||    
T  34645620 tttcgggctacttgatcacattgctc 34645645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 11698451 - 11698385
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg 269  Q
    |||||||||||||| ||||||||||||||| | || |||||||||||||||| ||||||||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccg 11698385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 463
Target Start/End: Original strand, 39093602 - 39093760
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    ||||||||||||||||||| ||| ||||||| || ||||  ||| ||| ||||||||||  ||| ||| ||||  ||| ||||||||||| | || |||     
T  39093602 tagttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctc 39093701  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggcta 463  Q
    ||| || | |||| ||||||| ||| ||||||||||| ||||||  |||||||||||||    
T  39093702 atctttatgttttaggtcattgttaattgttcttagtaaaaaatatgattttcgggcta 39093760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 403
Target Start/End: Original strand, 7982478 - 7982570
Alignment:
Q  311 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 403  Q
    ||||||||||||| ||| |||||| ||||||||  | ||||| ||||||||||  |||| ||||||| |||||||||||||||||| ||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactct 7982570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 31234554 - 31234486
Alignment:
Q  334 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
    |||||| ||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactc 31234486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 33472166 - 33472270
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||| |||| ||||||| || || |  ||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |    
T  33472166 agttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctca 33472265  T
Q  406 tcctt 410  Q
    |||||    
T  33472266 tcctt 33472270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 33472373 - 33472477
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||| ||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  33472373 agttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatca 33472472  T
Q  406 tcctt 410  Q
    |||||    
T  33472473 tcctt 33472477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 417
Target Start/End: Complemental strand, 10833551 - 10833468
Alignment:
Q  334 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 417  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||| ||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 7971193 - 7971072
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatg-tttcccgattacataatccga 270  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | |||||||| |||||||| |||| ||| ||||| ||||  ||||||||||||| |    
T  7971193 agggtgaaaaacggagttacggatttttccggattttgtaatctggaaacttca-aaaataggacgcgctacgtgatgttttctggattacataatccaa 7971095  T
Q  271 aaacccc-caaacaccctttttt 292  Q
    | |||||  ||||||||||||||    
T  7971094 acaccccataaacaccctttttt 7971072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 9845323 - 9845392
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 417  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttt 9845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 315 - 478
Target Start/End: Original strand, 7981618 - 7981781
Alignment:
Q  315 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 414  Q
    |||| |||| ||| |||| || |||||||  | ||||| ||||||||||| |||   |||||| ||||||| ||||  |||||||| || |||||| | |    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  415 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 478  Q
    ||||||| ||| ||| ||||| ||| | ||||||   |||||| ||||||||||||||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgct 7981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 410
Target Start/End: Complemental strand, 10840817 - 10840717
Alignment:
Q  310 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 409  Q
    ||||||||||| | |||| ||||| ||||||||| || |   | ||||||||||| ||| ||| | || ||||||||||||||||||||||||| |||||    
T  10840817 cggattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatcct 10840718  T
Q  410 t 410  Q
    |    
T  10840717 t 10840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 9845488 - 9845573
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 391  Q
    ||||||||||| ||||||| || ||  ||||||| ||| |||||||| ||||||||||| |||  ||||||| || ||||||||||    
T  9845488 agttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 24627717 - 24627761
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  24627717 tttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 10840923 - 10840881
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttac 243  Q
    |||||||| |||||||||||| |||||||||||||||| ||||    
T  10840923 cggattttataatccgaaaacctcaaaaaatagggcgcattac 10840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 41530812 - 41530862
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttccta 41530862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 33611606 - 33611289
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| ||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||||| | |    
T  33611606 agggtgaaaaatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 33611507  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33611506 aaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagc 33611410  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||| |||||||||| |||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  33611409 cattttaaggacaatatttatcttcctaaatcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatc 33611310  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||| ||||||||||    
T  33611309 ggattgctctgaaacttcccc 33611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 18583740 - 18583423
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||   ||| ||||  ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| | |||||||||||||| |    
T  18583740 agggtgaaaaatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 18583641  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| |||||||||||       ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  18583640 aaccccctaaacacctttttttaaggt---aaaatagttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagc 18583544  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  18583543 cattttagggacaatattaatctgcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatc 18583444  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||| ||||||||||    
T  18583443 ggattgctctgaaacttcccc 18583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 174 - 491
Target Start/End: Original strand, 23442703 - 23443018
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 273  Q
    |||||||||  |||| |||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||    
T  23442703 ggtgaaaaatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaa 23442802  T
Q  274 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 372  Q
    ||||| ||||| | |||||||||||       |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  23442803 ccccccaaacatctttttttaaggtaaaa---tagttcggattatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagcca 23442899  T
Q  373 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgg 472  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||    
T  23442900 ttttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcgg 23442999  T
Q  473 attgctctaaaacttcccc 491  Q
    |||||||| ||||||||||    
T  23443000 attgctctgaaacttcccc 23443018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 49786232 - 49786548
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| | || ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |    
T  49786232 agggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccggattacataatccgga 49786331  T
Q  272 aacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    |||||||||||||||||||||||| |       |||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  49786332 aacccccaaacacccttttttaagataaaa---tagttcggattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagcc 49786428  T
Q  372 attttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcg 471  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||| |||| |||||||||||||   ||||||| |||||||||||    
T  49786429 attttatggacaatattaatcttcctaactcttatccttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttttcggcctacttgatcg 49786528  T
Q  472 gattgctctaaaacttcccc 491  Q
    ||||||||| ||||||||||    
T  49786529 gattgctctgaaacttcccc 49786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 32817810 - 32817557
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  32817810 taaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatcc 32817711  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    |||||||||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||    
T  32817710 gaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggat 32817614  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 424  Q
    || ||||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  32817613 agtcattttagggacaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 195 - 491
Target Start/End: Complemental strand, 34162894 - 34162600
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 293  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||||||| ||||||||||||| |    
T  34162894 tttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttca 34162795  T
Q  294 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatct 393  Q
    ||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  34162794 aggtaaac----agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatct 34162699  T
Q  394 tcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||| |||||||    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| || ||||||  ||||||||||    
T  34162698 tcctaactcctatccttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttcccc 34162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 177 - 479
Target Start/End: Complemental strand, 45047041 - 45046741
Alignment:
Q  177 gaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccc 276  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||||| ||||||    
T  45047041 gaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccc 45046943  T
Q  277 cc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatt 374  Q
    || ||||||||  |||| || ||       ||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  45046942 cctaaacacccccttttcaatgtaaaa---tagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatt 45046846  T
Q  375 ttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggat 474  Q
    | ||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||||||||    
T  45046845 tcagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggat 45046746  T
Q  475 tgctc 479  Q
    |||||    
T  45046745 tgctc 45046741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 42545928 - 42546248
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||| ||||    
T  42545928 taaagggtgaaaaa-tgaataacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatcc 42546026  T
Q  269 gaaaacccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    |||||||||| || |||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  42546027 gaaaaccccctaagcaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 42546123  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctactt 466  Q
    || |||||||| || |||||||||| | |||||||| |||||| | |||||||||||| |||  |||||||||| ||||| | || ||||||||||||||    
T  42546124 agtcattttagagataatattaatcattctaactctcatccttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctactt 42546223  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  42546224 gatcggattgctccgaaacttcccc 42546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 15070041 - 15069732
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||| ||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||| |||||||    
T  15070041 taaagggagaacaaatgagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatcc 15069942  T
Q  269 gaaaaccccc--aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    | ||||||||  ||||||| ||||| ||| |        ||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |    
T  15069941 ggaaacccccctaaacaccatttttcaagataaaac---agttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatgga 15069845  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| |||||||| ||||||||||||||| |||||| | |||||| | |||||| ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  15069844 tagtcattttagagacaatattaatcttactaactttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctactt 15069745  T
Q  467 gatcggattgctc 479  Q
    |||||||||||||    
T  15069744 gatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 172 - 479
Target Start/End: Complemental strand, 41584866 - 41584556
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||   ||| ||||||||||| ||||||||||||||| ||| |||||||| ||||||  |||||||||||||| | |||||||||||||| |    
T  41584866 agggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcggattacataatccgga 41584767  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatcc-----gaagtgtatcagcacaaatcctaaacatatttgtaacatgt 365  Q
    ||||||| ||||| ||||||| |||||        |||||||||||||||||||     ||| ||||||||||||||| |||||||| |||||||||||     
T  41584766 aaccccctaaacatcctttttcaaggtaaatc---agttcggattatataatccaatccgaactgtatcagcacaaattctaaacatgtttgtaacatgg 41584670  T
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  41584669 atagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctact 41584570  T
Q  466 tgatcggattgctc 479  Q
    ||||||||||||||    
T  41584569 tgatcggattgctc 41584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 178 - 489
Target Start/End: Complemental strand, 40650865 - 40650556
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    |||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||    
T  40650865 aaaaaatgagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaacccc 40650766  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
      ||||||| ||||| |||||        |||||||||||||| ||| ||| |||||||||||||||  ||| ||| ||||||||||| |||  ||||||    
T  40650765 ttaaacaccatttttcaaggtaaaac---agttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcatttt 40650669  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 476  Q
    ||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| |||||||||| ||||| ||  ||||||||||||||||||||||||    
T  40650668 agggacaatattaatcttcctaactctcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattg 40650569  T
Q  477 ctctaaaacttcc 489  Q
    |||  ||||||||    
T  40650568 ctccgaaacttcc 40650556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 204 - 491
Target Start/End: Original strand, 49677478 - 49677763
Alignment:
Q  204 attttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnn 302  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||||| |||| |||||         
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaac 49677577  T
Q  303 nntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
       |||||||||||||||||||||| |||||||||| |||| |||| ||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  49677578 ---agttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactc 49677674  T
Q  403 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | || ||| | |||||||||||| |||| |||||||||| ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  49677675 tcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttcccc 49677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 169 - 479
Target Start/End: Original strand, 7011169 - 7011478
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttcc-ggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttcccgattacataat 266  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||  || |  ||||    
T  7011169 taaagggtgaaaaa-tgagtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaat 7011267  T
Q  267 ccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgt 365  Q
    |||||||||||| ||||| | ||||| |||||       ||||||||||||||||||||||| |||||||||| |||| |||||||| ||| |||||||     
T  7011268 ccgaaaaccccctaaacatcatttttcaaggtaaaa---tagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatgg 7011364  T
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||| | |||| ||||||| | || |||| ||||||||||||||| |||||||||||||    
T  7011365 atagtcattttagggacaatattaatcttcttaactctcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctact 7011464  T
Q  466 tgatcggattgctc 479  Q
    ||||||||||||||    
T  7011465 tgatcggattgctc 7011478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 40908133 - 40907813
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| |||||  | |||||| |||||| |||||||||||||| ||||| | |||||||||||| | |||||||||||||    
T  40908133 taaagggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatcc 40908034  T
Q  269 gaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    |||||||||| |||||||||||||| |||||        ||||||||||||||| || ||| ||||||||||||||| |||||||| ||||||||||| |    
T  40908033 gaaaaccccctaaacaccctttttttaaggtaaaac---agttcggattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatgga 40907938  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||  |||||||| |||||||||||||||||||||||  ||| || |  ||||||||||| |||| |||| ||||| ||||||||| ||||||| ||||||    
T  40907937 taatcattttagagacaatattaatcttcctaactcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactactt 40907838  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  40907837 gatcggattgctccgaaacttcccc 40907813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 17000342 - 17000659
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| ||||||||||||||||||| || |||| ||||| |||||||| ||||| ||||||||||  |||||||||||||| |    
T  17000342 agggtgaaaaatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccgga 17000440  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||||| |||||        |||| | ||||||||||| ||  ||||||||||||||| |||||||| ||||||||||| ||||     
T  17000441 aaccccctaaacaccatttttcaaggtaaaac---agtttgaattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagt 17000537  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  17000538 cattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgat 17000637  T
Q  470 cggattgctctaaaacttcccc 491  Q
     |||||||||  ||||||||||    
T  17000638 tggattgctccgaaacttcccc 17000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 169 - 446
Target Start/End: Complemental strand, 44573295 - 44573021
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  44573295 taaagggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 44573196  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | ||| |||  |||| || ||||| |||||       ||||||||||||||||||| ||| ||||| |||||||||  ||||||| ||||||||||| ||    
T  44573195 ggaaatcccttaaactccttttttcaaggtaaaa---tagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaat 44573100  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaa 446  Q
    || |||||||||||||||||||||||| |||||||| |||||| | |||||| ||||| ||||||||||||||||||||    
T  44573099 agtcattttagggacaatattaatctttctaactctcatccttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 45568076 - 45567769
Alignment:
Q  169 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||| |||||||| |||   |||||||| |||    
T  45568076 taaagggtgaaaaaaatgagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatc 45567977  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    ||||||||||| ||||||||||||| |||||                  | | |||||||| ||||||||||||||| |||||||| ||||||| ||| |    
T  45567976 cgaaaaccccctaaacaccctttttaaaggta-----------------aaacaatccgaactgtatcagcacaaattctaaacatgtttgtaatatgga 45567894  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||| |||||||||| ||||||||| ||||||| ||||||    
T  45567893 tagtcattttagggacaatattaatctttctaactctcatccatttgttttgggtcattgttacctgttcttagtaaaaaatcgggttttcggactactt 45567794  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  45567793 gatcggattgctccgaaacttcccc 45567769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 195 - 491
Target Start/End: Complemental strand, 28866803 - 28866509
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 293  Q
    |||||||||||||||||||||| || ||  ||||||||||||||| |||||||| ||||| |||||||||||| ||| |||| | ||||||||||||| |    
T  28866803 tttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaa 28866705  T
Q  294 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatct 393  Q
    |||         |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| |||||||||||| ||||| | |||||||    
T  28866704 agggaaaaac--agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatct 28866607  T
Q  394 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    || ||||||| |||||| | ||||||| |||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||    
T  28866606 tcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttcccc 28866509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 196 - 491
Target Start/End: Original strand, 34006246 - 34006541
Alignment:
Q  196 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 294  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| | |||||||| ||||| |||||||||||  ||| |||||  ||||||||||||| ||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  295 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 393  Q
    ||         ||||| ||||||||||||| || ||||| |||||||||  |||| || ||||||||||| |||| ||||||||||| ||||||||||||    
T  34006346 gggaaaaac--agttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatct 34006443  T
Q  394 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||||||| |||||| ||||||| ||||||  ||| |||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||    
T  34006444 tcctaactctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttcccc 34006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 52744905 - 52744722
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    ||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||| |||| |||||||||||||||||| |||    
T  52744905 ttcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatc 52744806  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||| | |||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||  ||||||||||    
T  52744805 cttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttcccc 52744722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 202 - 491
Target Start/End: Complemental strand, 26723649 - 26723367
Alignment:
Q  202 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnn 300  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| |||||      ||||||||||| |||||| ||||||||||||||||||        
T  26723649 ggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttttttaagggaaa 26723556  T
Q  301 nnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaa 399  Q
          ||||||||||||||||||||| | |||||||||||||   |||||| ||||||||||| |||| ||||||||||| |||||||||||||||| |    
T  26723555 aacg--gttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatattaatcttcctta 26723459  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||| ||| || ||||||| |||||| |||  |||||||||| ||||||||| |||| || |||||||||||||||||||  ||||||||||    
T  26723458 ctctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttcccc 26723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 381
Target Start/End: Original strand, 32542388 - 32542563
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 299  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||| | |||||||||||||  |||||||| |||||||||||   |||||      
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacccttt---aaggtaa 32542484  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga 381  Q
         ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  32542485 aa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattctaggga 32542563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 169 - 479
Target Start/End: Original strand, 38885199 - 38885481
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||| | ||||||||||||           | |||| |||||| |||||| |||||||||||||||  |||||||||||||    
T  38885199 taaagggtgaaaaaatgagtaacagatttttccggatt-----------acacttaaaaaaagagggcgtgttacatgatgtttca-gattacataatcc 38885286  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||  ||||||||||||| |||||        | |||||||||||||||||||| ||||||||||||||| |||||||| | |               
T  38885287 ggaaaccccttaaacaccctttttcaaggtaaaac---atttcggattatataatccgaactgtatcagcacaaattctaaacatgtgt----------- 38885372  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
       ||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||| || |||||||||||||||    
T  38885373 ---cattttaaggacaatattaattttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttg 38885469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 305 - 489
Target Start/End: Original strand, 27794925 - 27795108
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    ||||||| ||||||||||| ||| ||||||||| |||||  ||||||| ||| ||||||  |||| ||||||| ||||||||||||||||||||||| |     
T  27794925 tagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatc 27795024  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    || ||| | |||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||    
T  27795025 at-cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttcc 27795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 172 - 487
Target Start/End: Complemental strand, 6223934 - 6223634
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccga 270  Q
    ||||||||||||||||| |||| ||||| || |||||  |||||||||||||||||||| ||| |||| ||||||||| |||   |||||||||||||||    
T  6223934 agggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccga 6223835  T
Q  271 aaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    | |||||  ||||| ||||||| |||||        ||||||||||||||||||| |          |||||||  |||| || ||||||||||| ||||    
T  6223834 acaccccataaacatcctttttcaaggtaaaaac--agttcggattatataatccaa----------cacaaattttaaatatgtttgtaacatggatag 6223747  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
     |||||||||||||||| |     |||||||| | || ||| | |||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  6223746 tcattttagggacaataat-----tcctaactatcattcttctgttttaggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgat 6223652  T
Q  470 cggattgctctaaaactt 487  Q
    ||||||||||| ||||||    
T  6223651 cggattgctctgaaactt 6223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 24472889 - 24472706
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    |||||||||||||||||||| | ||| |||||||||  ||||||| ||||||||||| |||| ||||||| ||| |||||||| |||||||||| | ||     
T  24472889 ttcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcatt 24472790  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||| | |||| ||||||| |||  ||||||||||||||||||| ||||  |||| ||||||| |||||||||  ||||||||||    
T  24472789 cttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttcccc 24472706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 307 - 479
Target Start/End: Complemental strand, 3561398 - 3561226
Alignment:
Q  307 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 406  Q
    ||||| ||||||||||||||| |||||||||||||||  | ||||| ||||||||||  ||||  |||||| ||||| |||||||||| |||||||| ||    
T  3561398 gttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcat 3561299  T
Q  407 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    | || | |||| ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||||| ||||||||    
T  3561298 cattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctc 3561226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 43319395 - 43319271
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  | |||||||| ||||||||||||||| ||| | |||||||||||||    
T  43319395 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatcc 43319296  T
Q  269 gaaaaccccc-aaacaccctttttt 292  Q
    |||||||||| |||||| |||||||    
T  43319295 gaaaaccccctaaacactctttttt 43319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 307 - 479
Target Start/End: Original strand, 42928980 - 42929152
Alignment:
Q  307 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 406  Q
    ||||||||||||||||||| | |||||||| ||||||| | | ||| ||| |||||||||| ||||||||| |||| |||||||| ||| ||||||| ||    
T  42928980 gttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcat 42929079  T
Q  407 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     ||| | |||| | ||||| ||| ||||||| ||||||||||| | |||||| ||||||||||| ||||||||    
T  42929080 tcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctc 42929152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 348 - 490
Target Start/End: Complemental strand, 25563436 - 25563294
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 447  Q
    ||||| ||||||| ||| |||| ||||||| |||||||||||| |||| |||| || |||||||| |||| ||||||| ||| ||||| |||||||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaa 25563337  T
Q  448 tcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    || ||| |||| ||||||||||||||||||||  |||||||||    
T  25563336 tccgatattcgagctacttgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 30829632 - 30829541
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 292  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttt 30829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 24471481 - 24471389
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc--aaacaccctttttt 292  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacaccctttttt 24471389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 52745016 - 52744937
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  52745016 taaagtgtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 890609 - 890704
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||   | ||||||||||| ||| ||| |||| ||||||||||||||||| |||||    
T  890609 agttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcataact 890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 9446159 - 9446048
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||  |||||||||  ||| |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||||||| || || | |    
T  9446159 agttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttca 9446060  T
Q  406 tccttttatttt 417  Q
    ||||| ||||||    
T  9446059 tccttgtatttt 9446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 38950286 - 38950353
Alignment:
Q  226 aaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac-ccccaaacaccctttttt 292  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||| |||||||    
T  38950286 aaaaatagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacactctttttt 38950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 800969 - 800877
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 292  Q
    ||||||||||||||||||||  |||||||||||||||| |||  |||| ||| | ||||| | |||||||| |||||| ||||||| ||||||    
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacaccatttttt 800877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 9445922 - 9445846
Alignment:
Q  334 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    |||||| ||| |||||||| |||||| |||| |||| ||||||| ||| ||| ||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatcctt 9445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 27794818 - 27794893
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    ||||||||||||||||| | || ||||| | ||||||||||||||||||  || ||||||||||||| |||||||||    
T  27794818 agggtgaaaaaatgagttatggattttttcagattttgtaatccgaaaatctc-aaaaatagggcgctttacatgat 27794893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 26230145 - 26230256
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    |||| |||||||||||| ||||| ||||||| ||||| | |||| | |  |||||||||| ||||||| |||| |||  |||||||||||| || ||||     
T  26230145 tagtgcggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctc 26230244  T
Q  405 atccttttattt 416  Q
    |||||| |||||    
T  26230245 atccttctattt 26230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 434 - 487
Target Start/End: Original strand, 890748 - 890801
Alignment:
Q  434 ttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    |||||||||||||||| | |||||||| ||||||||| |||||||| |||||||    
T  890748 ttcttagtcaaaaatctggttttcgggttacttgatcagattgctccaaaactt 890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 43319016 - 43318940
Alignment:
Q  334 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    |||||| ||| || ||||| ||||||||||  |||| ||||||| | ||||||||||||||||||||| | ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatcctt 43318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 800615 - 800552
Alignment:
Q  347 aaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    |||||| |||||| |||| |||| ||||||  ||||||||||||| ||||||||||| ||||||    
T  800615 aaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatcctt 800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 479
Target Start/End: Complemental strand, 45880095 - 45880000
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||||||||||||||||| | |||||| | |||| ||||||| ||| || || |||||||||||||   |||| ||| |||||||||  |||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctc 45880000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 9446221 - 9446183
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcg 239  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9446221 cggattttgtaatccgaaaatctcaaaaaatagggcgcg 9446183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 24472995 - 24472950
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||    
T  24472995 gattttataatccgaaaacttcaaaaaatagggtgcgctacttgat 24472950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 205; Significance: 1e-111; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 47202457 - 47202767
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  47202457 agggtgaaaaatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 47202556  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47202557 aaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagc 47202653  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||       | ||||||||||||||||||| |||||||||||||||||     
T  47202654 cgttttagggacaatattaatcttcctaactcttatccttttgttttgggtca-------tcgttcttagtcaaaaatcgggttttcgggctacttgatt 47202746  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||| ||||||||||    
T  47202747 ggattgctcttaaacttcccc 47202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 190 - 490
Target Start/End: Original strand, 8154880 - 8155178
Alignment:
Q  190 acgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 288  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8154880 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctt 8154979  T
Q  289 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 388  Q
    |||||||||       |||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8154980 ttttaaggtaaaa---tagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatc 8155076  T
Q  389 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 488  Q
    |||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||||| ||||||| ||||||||||| |||| ||| |||||||    
T  8155077 aatcttcctagctcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttc 8155176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 172 - 490
Target Start/End: Complemental strand, 3304955 - 3304638
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccga 270  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  ||||||||||||| ||||| | |||||||||| ||||| ||||||||||||| |    
T  3304955 agggtgaaaaatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaa 3304856  T
Q  271 aaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    |||||||| |||||||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  3304855 aaaccccccaaacacccttttctaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataa 3304759  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||| || ||||||||||||||    
T  3304758 ccattttagggacaatattaatcttcctaactcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgat 3304659  T
Q  470 cggattgctctaaaacttccc 490  Q
    ||||||||||| |||||||||    
T  3304658 cggattgctctgaaacttccc 3304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 3936068 - 3936388
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3936068 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 3936167  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
     ||||||||| ||||||||||||| |||||        ||| || ||||||||||||||| ||||| |||||||||  ||||||| ||||||||||| ||    
T  3936168 aaaaaccccctaaacaccctttttcaaggtaaaac---agtccgaattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggat 3936264  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    |  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| | |||||||||||||||||||||||||| || ||||    
T  3936265 aatcattttagggacaatattaatcttcctaactctcatccttctattttgggtcattgttacctattcttagtcaaaaatcggattttcggactgcttg 3936364  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  3936365 atcggattgctccgaaacttcccc 3936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 172 - 489
Target Start/End: Original strand, 31643004 - 31643318
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||| |||| |||||||  | |||||||||||||||||| | |||||||||||||||| |||||||||||||| |    
T  31643004 agggtgaaaaatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccgga 31643103  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| |||||||||||||||||||       ||||||||||||||||||| ||| || ||||||| ||||||||||||||||| |||||||||||||    
T  31643104 aaccccccaaacacccttttttaaggtaaaa---tagttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagc 31643200  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||  |||||| ||||||||||    
T  31643201 tattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgg-gtttcggactacttgatc 31643299  T
Q  471 ggattgctctaaaacttcc 489  Q
    |||||||||| ||||||||    
T  31643300 ggattgctctgaaacttcc 31643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 174 - 491
Target Start/End: Complemental strand, 36468730 - 36468416
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 273  Q
    |||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||| |||||||||||||||  |||||||||||||| |||    
T  36468730 ggtgaaaaaatgagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgtttca-gattacataatccggaaa 36468632  T
Q  274 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 372  Q
    ||||| ||||||||||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||    
T  36468631 ccccctaaacaccctttttcaaggtaaaac---agtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtca 36468535  T
Q  373 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgg 472  Q
    ||||||| ||||||||||||||| ||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  36468534 ttttaggaacaatattaatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcgg 36468435  T
Q  473 attgctctaaaacttcccc 491  Q
    |||||||  ||||||||||    
T  36468434 attgctccgaaacttcccc 36468416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 169 - 459
Target Start/End: Complemental strand, 28230666 - 28230379
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  28230666 taaagggt-aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatcc 28230568  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  28230567 ggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 28230471  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 459  Q
    || ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| || | ||||||||||||||| |||| |||||||    
T  28230470 agtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggttttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 172 - 479
Target Start/End: Complemental strand, 42925837 - 42925531
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||| |    
T  42925837 agggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccgga 42925738  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||||| |||||        ||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  42925737 aaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 42925641  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||||||    |||||| ||||| |||||||||||||||||||||| || |||||||||||||||||    
T  42925640 cattttagggacaatattaatcttcctaactctcatccttccgtttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgat 42925541  T
Q  470 cggattgctc 479  Q
    ||||||||||    
T  42925540 cggattgctc 42925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 36629168 - 36629483
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||| |||||||||||| | |    
T  36629168 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 36629267  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||| | ||||||| |||||||||||        |||||||||||||||||||||| ||||||||| |||||  ||||||| ||||| ||||||   |     
T  36629268 aaccctctaaacaccattttttaaggtaaaac---agttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatgtc--gt 36629362  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||||||| ||||||||||||||||||||| |||||| | |||||| ||| | |||| || ||||||||||||||||| ||||||||||||||||||    
T  36629363 cattttagggagaatattaatcttcctaactctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatc 36629462  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||  ||||||||||    
T  36629463 ggattgctccgaaacttcccc 36629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 164 - 488
Target Start/End: Original strand, 36408325 - 36408648
Alignment:
Q  164 cttggtaaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattaca 262  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||| |||||||    
T  36408325 cttgttaaagggtgaaaaaaatgagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattaca 36408424  T
Q  263 taatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaac 361  Q
    ||||||| ||||| |  ||||||| | ||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  36408425 taatccggaaacctcataaacaccatctttcaaggtaaaac---agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac 36408521  T
Q  362 atgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggc 461  Q
    ||| ||||  |||||||||||||||||||||||| |||||||  | ||| | |||||||||||| |||| |||||||||||||||||  | ||||||| |    
T  36408522 atggatagtaattttagggacaatattaatcttcttaactctctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggac 36408621  T
Q  462 tacttgatcggattgctctaaaacttc 488  Q
    ||||||||||||||||||  |||||||    
T  36408622 tacttgatcggattgctccgaaacttc 36408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 19225798 - 19225477
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  19225798 taaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatc 19225699  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    || ||| |||| ||||||| ||||| ||| |        | |||||||||||||||| |||  |||||||||||||| |||||||| ||||||||||| |    
T  19225698 cggaaatcccctaaacaccatttttcaagataaaac---aattcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatgga 19225602  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||  ||||||| |||  |||| ||||||||||||||| |||||| | |||||||||||| ||||   |||||||||||||||| | ||||||| ||| ||    
T  19225601 tattcattttatggatgatataaatcttcctaactctcatccttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactattt 19225502  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  19225501 gatcggattgctccgaaacttcccc 19225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 168 - 489
Target Start/End: Original strand, 9151773 - 9152074
Alignment:
Q  168 gtaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||                  |||||||||||    
T  9151773 gtaaagggtgaaaaaatgagtaacaggtttttccggattttgtaatccggaaacttcaaaaaatagggcgc------------------attacataatc 9151854  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    || |||||||| ||||| ||||||| |||||        ||| | |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |    
T  9151855 cggaaaccccctaaacatcctttttcaaggtaaaac---agtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgga 9151951  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| |||| || ||||||    
T  9151952 tagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactactt 9152051  T
Q  467 gatcggattgctctaaaacttcc 489  Q
    |||||||||||||  ||||||||    
T  9152052 gatcggattgctccgaaacttcc 9152074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 172 - 410
Target Start/End: Complemental strand, 24042384 - 24042148
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |    
T  24042384 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccgga 24042285  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||  ||||     
T  24042284 aaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagt 24042188  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  24042187 cattttagggacaatatcaatcttcctaactctcatcctt 24042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 202 - 491
Target Start/End: Complemental strand, 33574200 - 33573922
Alignment:
Q  202 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnn 301  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||         |||||||||||        
T  33574200 ggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccca--------ttttttaaggtaaaa 33574109  T
Q  302 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
       ||||||| ||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  33574108 ---tagttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaact 33574012  T
Q  402 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||| ||||| |||||| |||| |||| ||| |||||||| || ||||||  |||||||||||||||||||| ||||||||||    
T  33574011 cttatccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttcccc 33573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 169 - 432
Target Start/End: Complemental strand, 37518494 - 37518233
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  37518494 taaagggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatcc 37518395  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||   ||    
T  37518394 ggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagat 37518298  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 432  Q
    || ||||||||| ||| ||||||||||||||||||| |||||| | |||| ||||||| ||||||    
T  37518297 agtcattttaggaacactattaatcttcctaactctcatccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 310 - 491
Target Start/End: Complemental strand, 42865162 - 42864981
Alignment:
Q  310 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 409  Q
    |||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  42865162 cggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 42865063  T
Q  410 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | | |||||||||||| | || ||||||| |||||||||| | ||||||| |||||||||||||||||||| |||| |||||    
T  42865062 tctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatcccc 42864981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 169 - 475
Target Start/End: Original strand, 33151167 - 33151467
Alignment:
Q  169 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataat 266  Q
    ||||||||||||||| |||| ||||| |||||   ||||||||||| || |||||| |||||| |||||||| ||| ||||||| | | |||||||||||    
T  33151167 taaagggtgaaaaaaatgaggaacggattttta--gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataat 33151264  T
Q  267 ccgaaaaccccc-aaacaccc-ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatg 364  Q
    ||| ||| |||| |||||| | |||||||||||        ||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||    
T  33151265 ccggaaatcccctaaacactcattttttaaggtaaaac---agttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatg 33151361  T
Q  365 tatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctac 464  Q
     ||||     ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||  ||||||||||||||||| || ||||| | ||||    
T  33151362 aatag-----ttagggacaatattaatcttcctaactctcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactac 33151456  T
Q  465 ttgatcggatt 475  Q
    |||||||||||    
T  33151457 ttgatcggatt 33151467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 203 - 487
Target Start/End: Complemental strand, 31985685 - 31985400
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaa--tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 299  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| ||| | ||||||||||| |||| |||||  ||||||| ||||| ||||       
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaaggggg 31985586  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
          ||||||||||||||||| |||| ||||||| |||||||  ||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||    
T  31985585 aaac--agttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaa 31985488  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    |||| ||| || | |||||||||||| |||   ||||||||||||||||| | |||| ||||||||||||| ||||| || |||||||    
T  31985487 ctctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactt 31985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 43737084 - 43737207
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  43737084 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 43737183  T
Q  269 gaaaaccccc-aaacacccttttt 291  Q
    | |||||||| |||||||||||||    
T  43737184 ggaaaccccctaaacacccttttt 43737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 306 - 479
Target Start/End: Original strand, 1518802 - 1518975
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||  |||  ||||||| ||||||||||||||||| ||||||| |    
T  1518802 agttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctca 1518901  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| |||||||||| ||| |||  |||||||||| |||||| || ||||||| |||||||||||||||||||    
T  1518902 tccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctc 1518975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 311 - 488
Target Start/End: Complemental strand, 24690393 - 24690215
Alignment:
Q  311 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||||||||| ||| |||||||||| ||||  ||| ||| ||||||||||| || | ||||||| ||||||||||||||| ||||||||| ||||||    
T  24690393 ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcatcctt 24690294  T
Q  411 ttattttgggtcattcttacttgttcttagtcaaaaatcgga-ttttcgggctacttgatcggattgctctaaaacttc 488  Q
    || |||||||||||| ||||  |||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  24690293 ttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttc 24690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 547 - 716
Target Start/End: Complemental strand, 18658162 - 18657990
Alignment:
Q  547 gagaagcttcaaagcaacgaaaaa--tattgagtgatgaatgatgc-gaattagattgctccgtctcttgattttgagagaacatacgagaatttattaa 643  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||  || ||||||| || |||||||||||||||||||||| |||||  ||| |||||    
T  18658162 gagaagcttcaaagcaatgaaagagtttttgagtgatgaatgatgttgagttagattacttcgtctcttgattttgagagaacgtacgatgattgattaa 18658063  T
Q  644 ccttcattatttatctttgcaaataatcttatatttgatcaataaacttgggtgaaagttgatttagaattga 716  Q
    ||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  18658062 cctacattctttatctttgcaaataatcttatatctgatcaataaacttaggtgaaagttgatgtagaattga 18657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 19818500 - 19818648
Alignment:
Q  331 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 430  Q
    ||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  19818500 tatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 19818599  T
Q  431 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     ||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  19818600 ctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctc 19818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 36946353 - 36946171
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    |||||||||||||| ||||| ||||||||||||||| || || || ||||||||||| |||  ||||||| | |||||||||| |||||||||||| |||    
T  36946353 ttcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaatattaagcttcctaactctcatc 36946255  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||| |||||||||||| ||| ||||| |||||||||| || | |||||||| |||||||||| ||||||   ||||||||||    
T  36946254 cttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttcccc 36946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 43737237 - 43737350
Alignment:
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  466 tgatcggattgctc 479  Q
    ||||||||||||||    
T  43737337 tgatcggattgctc 43737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 195 - 489
Target Start/End: Complemental strand, 7115444 - 7115151
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 293  Q
    ||||| |||||| | ||||||||| || ||||||||||||| ||||||| |||| ||| |  |||| |||||| |||||||||| ||||||| ||||| |    
T  7115444 ttttttcggattatataatccgaagacctcaaaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacaccatttttaa 7115345  T
Q  294 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatct 393  Q
     ||         | ||||||||||||||| || |  |||||| |||||||  | |   | ||| ||||||| ||| ||| |||| |||||||||||||||    
T  7115344 ggggaaaaac--aattcggattatataattcggaccgtatcaacacaaattttgagtttgtttctaacatggataaccaatttatggacaatattaatct 7115247  T
Q  394 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    |  ||||||| |||||| |||||| ||||||| ||| ||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  7115246 tgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctctgaaacttcc 7115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 5278358 - 5278501
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    ||||||||||||||||||| ||| ||||| |||| ||||  | ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  5278358 tagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactctt 5278457  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaat 448  Q
    |||||| | |||||||||||| |||   ||||||||||| ||||    
T  5278458 atccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 42877244 - 42877149
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacata 264  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  42877244 taaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgtttccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 312 - 490
Target Start/End: Complemental strand, 6467198 - 6467020
Alignment:
Q  312 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 411  Q
    |||||||||||||||| | ||||| ||||| | |||||||| ||||||| ||| ||||  |||||| || |||||||||| |||||||||||  |||||     
T  6467198 gattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttc 6467099  T
Q  412 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    |||||| ||||||| |||  |||||||||| ||||||  | | ||| |||||||||||||||||| ||| ||| |||||    
T  6467098 tattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccc 6467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 399 - 487
Target Start/End: Complemental strand, 26555128 - 26555040
Alignment:
Q  399 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    ||||| |||||| |||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactt 26555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 306 - 439
Target Start/End: Complemental strand, 16983806 - 16983673
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||| ||| |||||||||||||||  |     | ||||||||||| ||| ||| ||||  |||||||||||||||||||||||| |    
T  16983806 agttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctca 16983707  T
Q  406 tccttttattttgggtcattcttacttgttctta 439  Q
    ||||| |||||| ||||||| |||  ||||||||    
T  16983706 tccttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 479
Target Start/End: Complemental strand, 48776268 - 48776100
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 410  Q
    |||||||||||| || | ||| |||||||||  | ||||| ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| || | |      
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcatag 48776169  T
Q  411 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    | ||||| |||||||  || ||||||||||||||||||  |||||||| ||||||| ||| ||||||||    
T  48776168 tcattttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctc 48776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 352
Target Start/End: Original strand, 6467665 - 6467839
Alignment:
Q  179 aaaaatgagtaacgggtttttccggattttgtaa--tccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccc 276  Q
    |||||||||| |||| |||||||| ||| |||||  |||  |||  ||||||||||||| | |||||||||| | | | |||||||||||||||| ||||    
T  6467665 aaaaatgagttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccc 6467764  T
Q  277 cc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacat 352  Q
    || ||||||||||||| ||||         |||||||||||||||||||||| |||||||||| ||||  |||||||    
T  6467765 cctaaacaccctttttcaagg--gaaaaacagttcggattatataatccgaactgtatcagcataaattttaaacat 6467839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 48775705 - 48775798
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
    |||| ||||||||||||||||| |||||  ||||||||  |||||||  |||||||||| |||| || |||| |||||||||||||||||||||||    
T  48775705 agttaggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaact 48775798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 384 - 490
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 483  Q
    |||||||||||||||||||| ||| || | |||| ||||||| ||| ||||||||||| ||||||  | ||||  |||||||||||| ||||||||  ||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  484 acttccc 490  Q
    |||||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 308 - 470
Target Start/End: Complemental strand, 48706061 - 48705899
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    ||||| |||||||||| ||| |||||||||||| || |||| | ||||| ||||| | ||| | | |||| | || |||||||||||||||||||  |||    
T  48706061 ttcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactcggatc 48705962  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
     || | |||| ||||||| ||  ||||||| ||| ||||||   |||||||||||||||||||    
T  48705961 tttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatc 48705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 425
Target Start/End: Original strand, 43185887 - 43185996
Alignment:
Q  316 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 415  Q
    ||||||||| || |||||||||||||||  ||||||| ||| ||||||| |||  ||||||  ||||||||||||  ||||||||||| || ||| ||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatatt 43185986  T
Q  416 ttgggtcatt 425  Q
    || |||||||    
T  43185987 ttaggtcatt 43185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 26555214 - 26555131
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 278  Q
    ||||| |||||||||||||||||| |   ||||||||||||||||||||||||| |||   |||||| ||||||||| ||||||    
T  26555214 ttttttcggattttgtaatccgaatatcacaaaaaatagggcgcgttacatgatttttttggattacctaatccgaacaccccc 26555131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 491
Target Start/End: Original strand, 39581840 - 39582019
Alignment:
Q  312 gattatataatccgaagtgtatcagcaca--aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 409  Q
    |||||||||||||||| ||||||||||||  |||  |||   | ||||||||||| ||| ||| ||||  |||  ||||||||||| ||||||| || ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaatttaaagac--tattaatcttcataactctcattct 39581937  T
Q  410 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | | |||| ||||||| ||| || ||||| |||||||||| | |||| |||||||||||||  ||||||  |||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatcatattgcttaaaaaattcccc 39582019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 403
Target Start/End: Complemental strand, 8214354 - 8214257
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 403  Q
    |||||||||||  |||| | || || |||| ||| ||| || ||||| |||| |||||| |||| |||| || |||||||||||||||||||||||||    
T  8214354 agttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactct 8214257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 8214523 - 8214462
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 409  Q
    ||||| ||||||||||  || | ||||||| ||||||||||||||||||||||||| |||||    
T  8214523 aacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 491
Target Start/End: Complemental strand, 37518215 - 37518142
Alignment:
Q  418 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||||| |||| |||||||||| |||||| || |||| || ||| |||||||||||||||  ||||||||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttcccc 37518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 28349283 - 28349227
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttca 225  Q
    |||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  28349283 taaatggtgaaaaaatgagttacgaatttttctgaattttgtaatccgaaaacttca 28349227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 37218272 - 37218237
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggc 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  37218272 cggattttataatccgaaaacttcaaaaaatagggc 37218237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 28349226 - 28349192
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaa 229  Q
    ||||||||||||||||||| |||||||||||||||    
T  28349226 tttttccggattttgtaattcgaaaacttcaaaaa 28349192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 730 - 759
Target Start/End: Complemental strand, 21123110 - 21123081
Alignment:
Q  730 taagttcccttttctctttatctttgtgtt 759  Q
    ||||||||||||||||||||||||||||||    
T  21123110 taagttcccttttctctttatctttgtgtt 21123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 24690494 - 24690405
Alignment:
Q  208 tgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacacccttttttaagg 296  Q
    ||||||||| ||||||||||||||||||| |  ||  |||| ||| | ||||| | |||||||| ||||| |||||||||||||| ||||    
T  24690494 tgtaatccggaaacttcaaaaaatagggctcactatttgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagg 24690405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 28346116 - 28346173
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaataggg 235  Q
    ||||||||||| |||| | |||||| ||||||||||||  |||||||||||| |||||    
T  28346116 aaaaaatgagttacggatgtttccgaattttgtaatccagaaacttcaaaaagtaggg 28346173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 2358819 - 2358501
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccga 270  Q
    |||||||||||  |||| |||| |||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| | ||||||||||||     
T  2358819 agggtgaaaaatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccgg 2358720  T
Q  271 aaaccc-ccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    |||||| |||||||||||||||||||||       ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  2358719 aaaccctccaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatag 2358623  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||||| |||| ||||||||||||    
T  2358622 ccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgat 2358523  T
Q  470 cggattgctctaaaacttcccc 491  Q
    || |||||||| ||||||||||    
T  2358522 cgaattgctctgaaacttcccc 2358501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 172 - 487
Target Start/End: Original strand, 47301982 - 47302294
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| | || |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  47301982 agggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaa 47302081  T
Q  272 aaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    |||| || |||||||||||||| |||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47302082 aacctcctaaacaccctttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatag 47302178  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    |||||||| ||||||||||||| || ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |||||||||||||||||    
T  47302179 ccatttta-ggacaatattaatatt-ctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgat 47302276  T
Q  470 cggattgctctaaaactt 487  Q
    ||||||| ||| ||||||    
T  47302277 cggattgttctgaaactt 47302294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 50716215 - 50716533
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  50716215 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50716314  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  50716315 aaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt 50716411  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  50716412 cattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgat 50716511  T
Q  470 cggattgctctaaaacttcccc 491  Q
    ||||||||||  ||||||||||    
T  50716512 cggattgctccgaaacttcccc 50716533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 50796632 - 50796314
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  50796632 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50796533  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  50796532 aaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt 50796436  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  50796435 cattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgat 50796336  T
Q  470 cggattgctctaaaacttcccc 491  Q
    ||||||||||  ||||||||||    
T  50796335 cggattgctccgaaacttcccc 50796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 219 - 491
Target Start/End: Complemental strand, 43473118 - 43472848
Alignment:
Q  219 aacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattat 317  Q
    |||||||||||||| || || ||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||       ||||||| |||||    
T  43473118 aacttcaaaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaa---tagttcgaattat 43473022  T
Q  318 ataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 417  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  43473021 ataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgtttt 43472922  T
Q  418 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  43472921 gggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttcccc 43472848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 169 - 490
Target Start/End: Original strand, 35142037 - 35142353
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||   ||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  35142037 taaagggtgaaaaaa---gtaacggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatcc 35142133  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||| |||||||||||        |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| ||    
T  35142134 ggaaaccccctaaacaccattttttaaggtaaaac---agttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggat 35142230  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || |||||||  |||||||||||||||||||||||| |||||| |  ||||||||||| |||  ||||||||||||||||  || |||||||||||||||    
T  35142231 agtcattttaaagacaatattaatcttcctaactctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttg 35142330  T
Q  468 atcggattgctctaaaacttccc 490  Q
    ||||||||||||  |||||||||    
T  35142331 atcggattgctccgaaacttccc 35142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 201 - 491
Target Start/End: Original strand, 52777223 - 52777511
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtn 298  Q
    |||||||||||||||| |||||||||||| ||| || | ||||||||||||||| |||||||||||  | |||||||| |||||||||||||| |||||     
T  52777223 cggattttgtaatccggaaacttcaaaaa-tagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggta 52777321  T
Q  299 nnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
           |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  52777322 aaac---agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttctta 52777418  T
Q  399 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52777419 actcttatccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 52777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 38977947 - 38977627
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||| |||||||| ||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||   |||||||||||||    
T  38977947 taaagggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatcc 38977848  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    |||||||||| ||||||| ||||| |||||        |||||  ||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||    
T  38977847 gaaaaccccctaaacaccttttttcaaggtaaaac---agttcaaattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggat 38977751  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||| |||||| ||||| ||  |||||| ||||||||    
T  38977750 agtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttg 38977651  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    |||||||||||| |||||||||||    
T  38977650 atcggattgctccaaaacttcccc 38977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 47740131 - 47739812
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47740131 taaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 47740032  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||       | |||  |||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  ||    
T  47740031 ggaaaccccctaaacaccctttttcaaggtaaaa---ttgttttgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagat 47739935  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||| ||||||||||||||||||| ||||||| |||||| | |||| ||||||| |||| || | ||||| |||||| || |||||||||||||||    
T  47739934 agtcatttaagggacaatattaatcttcataactctcatccttctgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttg 47739836  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    |||||||||||| |||||||||||    
T  47739835 atcggattgctccaaaacttcccc 47739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 172 - 479
Target Start/End: Complemental strand, 3903002 - 3902697
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    ||||||||||   |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||| |    
T  3903002 agggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccgga 3902903  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||       
T  3902902 aaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgat 3902806  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||| ||||||||||||||||| ||||||| |||||| |  ||||||||||| |||| |||||||||||||||||||| ||||| |  |||||||||    
T  3902805 cattttatggacaatattaatcttcataactctcatccttctgctttgggtcattgttacatgttcttagtcaaaaatcgggttttcagattacttgatc 3902706  T
Q  471 ggattgctc 479  Q
    |||||||||    
T  3902705 ggattgctc 3902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 169 - 490
Target Start/End: Complemental strand, 3352266 - 3351946
Alignment:
Q  169 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||||| |||||||||  |||||||  ||||||||||| | |||||| ||||||||||| |||||||||||||||||| |||||||||||     
T  3352266 taaagggtgaaaaaaatgagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataatt 3352167  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    || |||||||| ||||||||||| | |||||        |||||| ||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |    
T  3352166 cggaaaccccctaaacaccctttatcaaggtaaaac---agttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgga 3352070  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||||||||||||||||||||||||||||| || ||| | |||||||||||| ||||  ||||||||| |||||| || ||||| ||||||||    
T  3352069 tagtcattttagggacaatattaatcttcctaactctcattcttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctactt 3351970  T
Q  467 gatcggattgctctaaaacttccc 490  Q
    |||||||||||||  |||||||||    
T  3351969 gatcggattgctccgaaacttccc 3351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 197 - 491
Target Start/End: Complemental strand, 34821514 - 34821222
Alignment:
Q  197 tttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaag 295  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||| ||||||| ||||| |||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  296 gtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 395  Q
    ||       ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||| |||||||||||||||||    
T  34821414 gtaaaa---tagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttc 34821318  T
Q  396 ctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||| | | |||||| | |||||||||||| |||| |||||||||| ||||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  34821317 ctaaatttcatccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttcccc 34821222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 28872966 - 28873286
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||   ||| ||| ||||||| ||||||| ||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||| |     
T  28872966 agggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaac 28873065  T
Q  272 aaccccc-aaacaccctttttt--aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtata 368  Q
    ||||||| ||||||||||||||  |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||    
T  28873066 aaccccctaaacacccttttttttaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagata 28873162  T
Q  369 gccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    | ||||||||||||||||||||||||| ||||||| || |||    |||||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  28873163 gtcattttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaatcgggttttcgggctacttg 28873262  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  28873263 atcggattgctccgaaacttcccc 28873286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 178 - 459
Target Start/End: Complemental strand, 51540804 - 51540525
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  51540804 aaaaaatgagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaacccc 51540705  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
      ||||||| ||||| |||||        |||||||||||||||||| |||  |||||||||||||| |||||||| |||||||| || |||| ||||||    
T  51540704 ttaaacaccgtttttcaaggtaaaac---agttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcatttt 51540608  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 459  Q
    ||||||||||||||||||||||||||| |||||| |  ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  51540607 agggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggttttcgg 51540525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 194 - 479
Target Start/End: Complemental strand, 501315 - 501032
Alignment:
Q  194 gtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg-aaaaccccc-aaacacccttttt 291  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| |||||    
T  501315 gtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattgcataatccggaaaaccccctaaacacctttttt 501216  T
Q  292 taaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 391  Q
     |||||        |||||| ||||||||||||||| ||||| ||||||||| |||||||| ||||||| ||| |||| ||||||| |||||||||||||    
T  501215 caaggtaaaac---agttcg-attatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaat 501120  T
Q  392 cttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||||| |||| |||||| | |||||||||||| |||| |||| ||| |||||||||   |||||||||||||||||||||||||||    
T  501119 cttcctagctctcatccttctgttttgggtcattgttacatgtttttattcaaaaatcatgttttcgggctacttgatcggattgctc 501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 39149770 - 39150089
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||| |||||||||||||    
T  39149770 taaagggtgaaaaaattagcaacggatttttccggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatcc 39149868  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||| ||||| |||||        ||||||| |||||||||||||| | |||||||||||||  ||||||| ||||||||||   |    
T  39149869 ggaaaccccctaaacaccatttttcaaggtaaaac---agttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggt 39149965  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || |||||||| |||||||||||| ||||||||||| |||||| | |||||||||| | |||| |||||||||| ||||| ||| |||||||||||||||    
T  39149966 agtcattttagagacaatattaattttcctaactctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttg 39150065  T
Q  468 atcggattgctctaaaacttcccc 491  Q
     ||| |||||||  ||||||||||    
T  39150066 gtcgaattgctccgaaacttcccc 39150089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 176 - 479
Target Start/End: Complemental strand, 46622977 - 46622686
Alignment:
Q  176 tgaaaaaatgagtaacgggtttttccggattttgtaat-ccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 274  Q
    |||||||||||||||||| |||||||||||||| |||  ||| ||||||||||||||||| | ||||||||||||||||| |||||||||||| | ||||    
T  46622977 tgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaac 46622878  T
Q  275 cccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 373  Q
    |||| ||||||| ||||| || ||        |||||||||||||||||||||| ||||||||||||||| ||||||||           | |||| |||    
T  46622877 cccctaaacaccatttttcaaagtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacat-----------ggatagtcat 46622792  T
Q  374 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 473  Q
    |||||||||||||||||||||||| ||||| || ||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46622791 tttagggacaatattaatcttccttactctcattcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcgga 46622692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 169 - 479
Target Start/End: Original strand, 51258363 - 51258672
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||  ||| |||||||||||||||||||||||| || ||| | |||||||||||||    
T  51258363 taaagggtgaaaaa-tgagttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatcc 51258461  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    ||| |||||| ||||||| ||||| ||||         | || | ||||||||||||||| |||||||||||||||  ||||||| ||| ||||||| ||    
T  51258462 gaacaccccctaaacaccatttttcaagggaaaaac--aatttgaattatataatccgaactgtatcagcacaaattttaaacatgtttataacatggat 51258559  T
Q  368 agccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    || ||||||||||| |||||||||||||| ||||||| |||||||| ||||| |||||| |||| |||||||||||||||||||  ||||||| | ||||    
T  51258560 agtcattttagggaacaatattaatcttcataactctcatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgagttttcggacaactt 51258659  T
Q  467 gatcggattgctc 479  Q
    |||||||||||||    
T  51258660 gatcggattgctc 51258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 176 - 395
Target Start/End: Original strand, 3937355 - 3937563
Alignment:
Q  176 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc 275  Q
    |||||||  |||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||     
T  3937355 tgaaaaatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcgaaaac- 3937453  T
Q  276 cccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattt 375  Q
           |||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3937454 -------acccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattt 3937543  T
Q  376 tagggacaatattaatcttc 395  Q
    || |||||||||||||||||    
T  3937544 tatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 173 - 421
Target Start/End: Original strand, 33438486 - 33438731
Alignment:
Q  173 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 272  Q
    |||||||||||| |||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||  | ||    
T  33438486 gggtgaaaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtt-ccggattacataatgtggaa 33438584  T
Q  273 acccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    |||| |||| |||| ||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| |||| |    
T  33438585 accctcaaaacaccatttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtc 33438681  T
Q  372 attttagggacaatattaatcttcctaactcttatccttttattttgggt 421  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  33438682 attttagggacaatattaatcttcctaactctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 49096425 - 49096105
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||||| |||  |||||||||| |||  |||||||||| ||| |  ||||||||||||    
T  49096425 taaagggtgaaaaa-taagttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatcc 49096327  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
     || |||||| ||||| ||||||| ||||         |||| | ||||||||||| ||| |||||||||||||||  ||||||| ||||||||||  ||    
T  49096326 aaacaccccctaaacagcctttttcaaggaaaaac---agtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagat 49096230  T
Q  368 agccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    || ||||||||||| |||||| ||||||||||||||| |||||| | ||||| |||||| |||| ||||||| |||||||||||  ||||||||||||||    
T  49096229 agtcattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctactt 49096130  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    ||||||||||||| |||||||||||    
T  49096129 gatcggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 203 - 490
Target Start/End: Complemental strand, 30721974 - 30721690
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcg---ttacatgatgtttcccgattacataatccgaaaaccccc--aaacacccttttttaaggt 297  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||| ||| | |||||||||||||||| || |||  ||||||| ||||| ||||     
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagg- 30721876  T
Q  298 nnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcct 397  Q
           |||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||   | |   |||||||||||||||||||||||||||    
T  30721875 -gaaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac---tct---cattttagggacaatattaatcttcct 30721783  T
Q  398 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    ||||||||||||| | ||||||||||||  |||  ||| |||||||||||| || |||||| ||||||||||||||||||||  |||||||||    
T  30721782 aactcttatccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttccc 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 321 - 479
Target Start/End: Original strand, 47123136 - 47123294
Alignment:
Q  321 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 420  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  421 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 321 - 479
Target Start/End: Original strand, 47130502 - 47130660
Alignment:
Q  321 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 420  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| | |  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  421 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 386 - 491
Target Start/End: Original strand, 3938357 - 3938462
Alignment:
Q  386 attaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaac 485  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  486 ttcccc 491  Q
    ||||||    
T  3938457 ttcccc 3938462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 314 - 487
Target Start/End: Complemental strand, 5127955 - 5127782
Alignment:
Q  314 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 413  Q
    |||||||||| ||| |||||||||| ||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| |||| |||     
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttg 5127856  T
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    ||||| |||||| ||| |||||||| |||||||||| | ||||||| ||||||||| | |||||| | ||||||    
T  5127855 ttttgcgtcattgttagttgttcttggtcaaaaatctggttttcggactacttgattgaattgctttgaaactt 5127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 305 - 477
Target Start/End: Original strand, 40062473 - 40062645
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    ||||||||||||||||||||||| | |||||||||||||  | |   | ||||||||||| ||| | | ||||  ||| ||||||||||||||||||||     
T  40062473 tagttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctg 40062572  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgc 477  Q
     ||||||| |||| ||||||| ||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40062573 gtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgc 40062645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 35345931 - 35345788
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 447  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||| || |||||||| |||||||| ||||  |||||| ||| |||||||||||||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  448 tcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | || |||||||| || |||||||||||||||  ||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttcccc 35345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 306 - 491
Target Start/End: Original strand, 51492894 - 51493080
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||| ||||||||||| ||||  ||||||||| |||| ||| ||||||| ||| ||||  |||||| ||||||||||||||||||||||||| |    
T  51492894 agttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctca 51492993  T
Q  406 tccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||| | |||| ||||||| |||  ||||||||||  |||||| || |||| || |||||||||| ||||||||  ||||||||||    
T  51492994 tccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttcccc 51493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 34821595 - 34821510
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcc 254  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  34821595 taaagggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttcc 34821510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 354 - 479
Target Start/End: Original strand, 46624863 - 46624988
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 453  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||| ||| ||||| |||||||||||||  ||    
T  46624863 tttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatctaat 46624962  T
Q  454 tttcgggctacttgatcggattgctc 479  Q
    ||| || ||||||||||| |||||||    
T  46624963 ttttggactacttgatcgaattgctc 46624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 48303951 - 48304060
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||| | |||||||||| ||| | |||||||||||||    
T  48303951 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatcc 48304050  T
Q  269 gaaaaccccc 278  Q
    ||||||||||    
T  48304051 gaaaaccccc 48304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 45244356 - 45244469
Alignment:
Q  176 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc 275  Q
    ||||||||||||| | || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||| | |||||||||||| |||||      
T  45244356 tgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaa-- 45244453  T
Q  276 cccaaacaccctttttt 292  Q
     ||||||||||||||||    
T  45244454 -ccaaacaccctttttt 45244469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 47123066 - 47123135
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47123066 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 47130432 - 47130501
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47130432 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 312 - 478
Target Start/End: Original strand, 29048444 - 29048610
Alignment:
Q  312 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 411  Q
    |||||||||||| ||| | ||||| ||||||| || || || ||||||||||| | ||  |||||| ||| ||||||||||||| ||||||||||||||     
T  29048444 gattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatg-acagttattttaaggataatattaatcttcataactcttatcctta 29048542  T
Q  412 tattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgct 478  Q
    | |||| ||||||| |||  ||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  29048543 tgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgct 29048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 479
Target Start/End: Complemental strand, 47980063 - 47979895
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 410  Q
    ||||||||||||||| |||||||||||||||  | ||||||||| ||||||  |||| ||||||| |||||||||||||||| |||||||| ||   |      
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcatggatag 47979964  T
Q  411 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    | ||||| ||||||| ||| ||||| ||| |||||||    |||| |||||||||||||| ||||||||    
T  47979963 tcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggctacttgatcagattgctc 47979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 491
Target Start/End: Complemental strand, 54229961 - 54229776
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||||||||||||||| | || ||||||| ||||||| || |   | ||||||||||| ||| ||| |||| |||| |||||||||||||| ||||  |    
T  54229961 agttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgca 54229862  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    || || | || | ||||||| ||| ||||| ||||||||||||  | |||||  ||||||||||| ||||||||| ||||||||||    
T  54229861 tcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaacttcccc 54229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 306 - 479
Target Start/End: Complemental strand, 14828983 - 14828809
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||| ||||||||||||||||| | ||| | | ||||| ||||| || ||| ||||||| |||   |||||| ||| ||||||||||||| |||| || |    
T  14828983 agtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctca 14828884  T
Q  406 tccttttattttgggtcattcttacttgttcttagtca-aaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||| | | ||||||||| || ||| ||||||||||||| |||||| |||||||||  |||||||| |||||||||    
T  14828883 tccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctc 14828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 308 - 479
Target Start/End: Original strand, 47769359 - 47769530
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    ||||||||||| |||| ||| ||||||||| ||||| || ||||| ||||||||||| |||| ||||||| | |  |||||||||||  ||||| | |||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     || |||||| ||||||| ||| ||||||  |||| ||||   ||| |||||| || |||||||||||||||    
T  47769459 attctattttaggtcattgttagttgttcccagtcgaaaaaatgatattcgggttatttgatcggattgctc 47769530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 491
Target Start/End: Complemental strand, 4300276 - 4300159
Alignment:
Q  374 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 473  Q
    |||| ||||||||||||||||||||||| | |||||||| | || ||||||| |||  |||||||||| |||||||   |||| |||||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  474 ttgctctaaaacttcccc 491  Q
    ||||||||||||||||||    
T  4300176 ttgctctaaaacttcccc 4300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 414 - 479
Target Start/End: Original strand, 33439384 - 33439449
Alignment:
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  33439384 ttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctc 33439449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 45712148 - 45712053
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
    |||||||||||||||||| ||| |||||||||||||||  | | ||| ||||||||||| |||  |||||||  ||| ||||||||||||||||||    
T  45712148 agttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 27143473 - 27143351
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||| ||  ||||||||||||||| || ||||| ||||||||||| ||||  |||||| ||| ||||||||  ||||||||  | |||||| |    
T  27143473 attatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaagattcctaaccatcatccttct 27143374  T
Q  413 attttgggtcattcttacttgtt 435  Q
    ||||||| ||||| ||| |||||    
T  27143373 attttggatcattgttagttgtt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 42936686 - 42936736
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  42936686 tttttccggattttgtaatccgaaaacttcaaaaaatagggtgcgctacat 42936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 399
Target Start/End: Complemental strand, 26053584 - 26053491
Alignment:
Q  307 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggg-acaatattaatcttcctaa 399  Q
    |||| ||||||||||||| || ||||||| ||||||| |||||||| ||| |||| || |||| |||||||||| |||||| ||||||||||||    
T  26053584 gttctgattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaa 26053491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 425
Target Start/End: Original strand, 29035893 - 29036013
Alignment:
Q  306 agttcggattatataatccgaagtgt-atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    |||||| ||||||||||| ||| ||| |||| ||||||| |||| ||| ||||||||||| |||  ||||||| |||| |||||| |||||||||||||     
T  29035893 agttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctc 29035992  T
Q  405 atccttttattttgggtcatt 425  Q
    ||| || | |||| |||||||    
T  29035993 atcattatgttttaggtcatt 29036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 8735530 - 8735592
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 8735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 9087771 - 9087833
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 9087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 33842098 - 33842034
Alignment:
Q  346 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||| ||||||| ||| |||| ||||||| ||||||||||||| ||| ||||||| ||||||    
T  33842098 taaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatcctt 33842034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 29035809 - 29035880
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta 377  Q
    ||||||||||||||||| |||| ||||| |  |||||| || ||||| ||||||||||| |||| |||||||    
T  29035809 agttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 33700775 - 33700810
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaa 230  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33700775 tttttccagattttgtaatccgaaaacttcaaaaaa 33700810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  335 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    ||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 425
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  316 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 415  Q
    |||||||| ||| ||||| |||||||||  | |  || ||| ||||||  ||| |||||||| |||| |||||||||||| ||||||| |||||| | ||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  416 ttgggtcatt 425  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 32441782 - 32442098
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| | || |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| |    
T  32441782 agggtgaaaaatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccgga 32441881  T
Q  272 aacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    |||||| ||||||  |||||||||||       |||||||||||||||||||| || |||| ||||||| ||| ||||||||||||||||||||||| ||    
T  32441882 aacccctaaacacatttttttaaggtaaaa---tagttcggattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataacc 32441978  T
Q  372 attttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcg 471  Q
    ||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||    
T  32441979 attttaaagacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcg 32442078  T
Q  472 gattgctctaaaacttcccc 491  Q
    ||||||||| ||||||||||    
T  32442079 gattgctctgaaacttcccc 32442098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 201 - 490
Target Start/End: Original strand, 34972864 - 34973151
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 299  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||| |||||||||||      
T  34972864 cggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaa 34972963  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
         ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34972964 aa---tagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 34973060  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    ||||||||||||| |||| ||||||| |||  |||||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  34973061 ctcttatccttttgttttaggtcattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccc 34973151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 25491594 - 25491274
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25491594 taaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatcc 25491495  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||| ||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||    
T  25491494 ggaaaccccctaaacaccttttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaat 25491398  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| |||| || |||||||    
T  25491397 agtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttg 25491298  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    |||||||||||| |||| ||||||    
T  25491297 atcggattgctccaaaatttcccc 25491274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 172 - 490
Target Start/End: Complemental strand, 6229007 - 6228693
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||  |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||   ||| || |    
T  6229007 agggtgaaaaatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta---aattcgga 6228911  T
Q  272 aacccccaaacaccc--ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    |||||| ||||||||  |||||||||||       ||||||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||||    
T  6228910 aacccctaaacacccctttttttaaggtaaaa---tagttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatag 6228814  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| || ||||||||||| |||||    
T  6228813 ccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgat 6228714  T
Q  470 cggattgctctaaaacttccc 490  Q
    |||||||||||||||||||||    
T  6228713 cggattgctctaaaacttccc 6228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 169 - 479
Target Start/End: Original strand, 19835488 - 19835796
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||    
T  19835488 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatcc 19835587  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  19835588 ggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 19835684  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||| ||||||||||||||||||||||| ||| || | ||||| |||||| |||| |||| |||||||||| |||| ||||||| |||||||    
T  19835685 agtcattttaggaacaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggttttcggactacttg 19835784  T
Q  468 atcggattgctc 479  Q
    ||||||||||||    
T  19835785 atcggattgctc 19835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 40703631 - 40703952
Alignment:
Q  169 taaagggtgaaaa-aatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||| |||||||||| |    
T  40703631 taaagggtgaaaagaatgagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacc 40703730  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
     |||||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |    
T  40703731 tgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgga 40703827  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||  | |||||||||||||||||| |||| || ||||||    
T  40703828 tagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactactt 40703927  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    ||||||||||||   ||||||||||    
T  40703928 gatcggattgctaagaaacttcccc 40703952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 169 - 478
Target Start/End: Complemental strand, 48319263 - 48318956
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  48319263 taaagggtgaaaaaatgagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatcc 48319165  T
Q  269 gaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    |||||||||| ||||||| |||||| |||||        || ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||  |    
T  48319164 gaaaaccccctaaacacctttttttcaaggtaaaac---agctcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattga 48319068  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||  | |||||||| ||||||||||||||||| ||||||    
T  48319067 tagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactactt 48318968  T
Q  467 gatcggattgct 478  Q
    ||||||||||||    
T  48318967 gatcggattgct 48318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 172 - 490
Target Start/End: Original strand, 49396979 - 49397299
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||   ||||||||||||||||    
T  49396979 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgtttttggattacataatccgaa 49397078  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    || |||  ||||| | |||||||| ||       ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| |    
T  49397079 aatcccttaaacatcattttttaatgtaaaa---tagttcggattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatgtataac 49397175  T
Q  371 cat----tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    |||    ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||||||| |||||| |||||||    
T  49397176 catccattttagggacaatattaatcttcctaactcttatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctactt 49397275  T
Q  467 gatcggattgctctaaaacttccc 490  Q
    |||||||||||||| |||||||||    
T  49397276 gatcggattgctctgaaacttccc 49397299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 169 - 488
Target Start/End: Complemental strand, 17933336 - 17933019
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  17933336 taaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatct 17933237  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||  |||||||||||||||||||        ||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||| ||    
T  17933236 ggaaaccccttaaacacccttttttaaggtaaaac---agttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggat 17933140  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    |  ||||||||||||| ||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||||| ||||||| | | |||||    
T  17933139 aatcattttagggacattattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttg 17933040  T
Q  468 atcggattgctctaaaacttc 488  Q
    ||||||||||||  |||||||    
T  17933039 atcggattgctccgaaacttc 17933019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 2506232 - 2505922
Alignment:
Q  169 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttcccgattacataat 266  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| || |  |||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  2506232 taaagggtgaaaaaaatgagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataat 2506133  T
Q  267 ccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgt 365  Q
    ||| |||||||| ||||||||||||| |||||        |||| ||||||||||||||||| |||||||||||||||  ||||||| |||||||||||     
T  2506132 ccggaaaccccctaaacaccctttttcaaggtaaaac---agtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatgg 2506036  T
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||| ||||||||||||| |||||| |||||||||||||    
T  2506035 atagtcattttagggacaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctact 2505936  T
Q  466 tgatcggattgctc 479  Q
    ||||||||||||||    
T  2505935 tgatcggattgctc 2505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 172 - 490
Target Start/End: Complemental strand, 55052815 - 55052498
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||| ||||| |||||||| |    
T  55052815 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccgga 55052716  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||        |||||| ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| ||||     
T  55052715 aaccccctaaacaccctttttcaaggtaaaac---agttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagt 55052619  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||| ||||||||||||||| | ||||||  | |||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  55052618 cattttagggacaatgttaatcttcctaactatcatccttccattttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgat 55052519  T
Q  470 cggattgctctaaaacttccc 490  Q
     |||||||||  |||||||||    
T  55052518 tggattgctccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 172 - 487
Target Start/End: Complemental strand, 6003869 - 6003556
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaat--agggcgcgttacatgatgtttcccgattacataatccg 269  Q
    |||||||||||  |||| |||| ||||| || ||||| ||||||| |||||| ||||||   || | |||||||||||||||||| ||||||||||||||    
T  6003869 agggtgaaaaatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccg 6003770  T
Q  270 aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtata 368  Q
     |||||||| |||||||  ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||    
T  6003769 gaaaccccctaaacacc--tttttaaggtaaaa---tagttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtata 6003675  T
Q  369 gccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttga 468  Q
    | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  6003674 gtcattttagggataatattaatcttcctaactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttga 6003575  T
Q  469 tcggattgctctaaaactt 487  Q
    | |||||||||| ||||||    
T  6003574 ttggattgctctgaaactt 6003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 178 - 491
Target Start/End: Complemental strand, 25752634 - 25752322
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    ||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25752634 aaaaaatgagtaatggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaacccc 25752535  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
      ||||||||||||| |||||        |||||||||||||| ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| ||||||    
T  25752534 ataaacaccctttttcaaggtaaaac---agttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcatttt 25752438  T
Q  377 agggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    | ||||||||| |||||||||| |||| ||| || |  |||||||| ||| |||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  25752437 aaggacaatatcaatcttcctagctctcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagatt 25752338  T
Q  476 gctctaaaacttcccc 491  Q
    ||||  ||||||||||    
T  25752337 gctccgaaacttcccc 25752322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 218 - 491
Target Start/End: Complemental strand, 41413249 - 41412977
Alignment:
Q  218 aaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggatta 316  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||       ||||||||||||    
T  41413249 aaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaa---tagttcggatta 41413154  T
Q  317 tata--atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 414  Q
    ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |    
T  41413153 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgt 41413054  T
Q  415 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||| ||||||| |||| |||||||| ||||||||| | |||||||||||||||||| ||||| ||| ||||||||||    
T  41413053 tttaggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttcccc 41412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 178 - 491
Target Start/End: Complemental strand, 46440464 - 46440151
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  46440464 aaaaaatgaataacgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaacccc 46440365  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
    | ||||||||||||| |||||        |||||||||||||||||||||| | ||||||||||||| ||||||||  |||||||||| |||  ||||||    
T  46440364 ctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcatttt 46440268  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttac--ttgttcttagtcaaaaatcggattttcgggctacttgatcggat 474  Q
    |||||||||| |||||||| ||||||| |||||| | |||| | ||||| ||||   |||||||| ||||||||||||||||||| ||||||||||||||    
T  46440267 agggacaatactaatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggat 46440168  T
Q  475 tgctctaaaacttcccc 491  Q
    |||||  ||||||||||    
T  46440167 tgctccgaaacttcccc 46440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 169 - 478
Target Start/End: Original strand, 7931626 - 7931931
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  7931626 taaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatcc 7931725  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| |||||||| || | || ||        |||||||||||||||||| ||| | ||| ||||||||| |||||||| ||||||||||| ||    
T  7931726 ggaaaccccctaaacaccc-ttctcaatgtaaaac---agttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggat 7931821  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    ||  |||||||||||||||||||||||||||||||| |||| | | |||||||||||| |||| |||| || |||||||||||  ||||||| |||||||    
T  7931822 agttattttagggacaatattaatcttcctaactctcatcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttg 7931920  T
Q  468 atcggattgct 478  Q
     ||||||||||    
T  7931921 gtcggattgct 7931931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 172 - 487
Target Start/End: Original strand, 38536141 - 38536455
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||   ||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  38536141 agggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 38536240  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||| ||||     
T  38536241 aaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagt 38536337  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||| ||||||||||||||||||||||||| ||  || |  |||| ||||||| |||| ||||||||||||||||||   ||||| |||||||||||    
T  38536338 cattttatggacaatattaatcttcctaactctcattattctgtttttaggtcattgttacatgttcttagtcaaaaatcaagttttcaggctacttgat 38536437  T
Q  470 cggattgctctaaaactt 487  Q
    ||||||| || |||||||    
T  38536438 cggattgttccaaaactt 38536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 196 - 491
Target Start/End: Original strand, 8106387 - 8106682
Alignment:
Q  196 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 294  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||| |||||| ||||||| |||||  |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  295 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 393  Q
    ||        |||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| || |||| |||||||    
T  8106487 gg--gaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatct 8106584  T
Q  394 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | |||||||| |||||| | ||||| |||||| |||| |||||||| ||||||||| | |||| ||||||||||||| |||| |||  ||||||||||    
T  8106585 ttctaactctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttcccc 8106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 310 - 489
Target Start/End: Complemental strand, 53894085 - 53893906
Alignment:
Q  310 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 409  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  410 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    | | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttcc 53893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 230 - 479
Target Start/End: Complemental strand, 31582560 - 31582313
Alignment:
Q  230 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 328  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||| |||     
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaat 31582464  T
Q  329 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 428  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||| | ||||| ||||| ||||||||||| |||||| | |||||||||||| ||    
T  31582463 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgtt 31582364  T
Q  429 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    || ||||||||||||||||||   ||||||||||| |||||||||||||||    
T  31582363 acatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctc 31582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 172 - 464
Target Start/End: Complemental strand, 3703446 - 3703155
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||| ||| | ||||||||||| ||||    
T  3703446 agggtgaaaaaatgagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaa 3703347  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
     |||||| ||||||| ||||| ||||         ||||  | ||||||||| | || ||||||||||||||| |||||||| ||||||||||  ||||     
T  3703346 caccccctaaacaccatttttcaagg--gaaaaacagttatggttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagt 3703249  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctac 464  Q
    ||||||||| | ||||||||||||| ||||||| |||||| | |||| ||||| | |||| |  | ||||||||||||||||||||||||||||    
T  3703248 cattttaggaagaatattaatcttcataactctcatccttctgttttaggtcaatgttacctacttttagtcaaaaatcggattttcgggctac 3703155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 172 - 367
Target Start/End: Original strand, 23523877 - 23524071
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-ga 270  Q
    |||||||||||  |||| |||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||    
T  23523877 agggtgaaaaatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccaga 23523976  T
Q  271 aaacccccaaacaccc-ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    || |||| |||||||| |||||||||||       || |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  23523977 aaccccctaaacaccctttttttaaggt---aaaataattcggattatataatccacactgtatcagcacaaatcctaaacatatttgtaacatgtat 23524071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 54631662 - 54631489
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  54631662 taaagggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatcc 54631563  T
Q  269 gaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaat 343  Q
    | |||||||| ||||||  |||||| |||||        ||||||||||||| |||| ||| |||||||||||||||    
T  54631562 ggaaaccccctaaacacatttttttcaaggtaaaac---agttcggattatacaatctgaactgtatcagcacaaat 54631489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 172 - 357
Target Start/End: Original strand, 29822590 - 29822773
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| | |||||||||||||| |    
T  29822590 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccgga 29822689  T
Q  272 aacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttg 357  Q
    ||||||  ||||||||| ||| |||||        | |||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  29822690 aaccccataaacaccctctttcaaggtaaaac---aattcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 376 - 491
Target Start/End: Complemental strand, 54631486 - 54631371
Alignment:
Q  376 tagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggatt 54631387  T
Q  476 gctctaaaacttcccc 491  Q
    |||| |||||||||||    
T  54631386 gctccaaaacttcccc 54631371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 333 - 491
Target Start/End: Original strand, 52089315 - 52089473
Alignment:
Q  333 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 432  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| | || ||| |  ||||||||||| |||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  433 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttcccc 52089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 315 - 479
Target Start/End: Complemental strand, 27742169 - 27742004
Alignment:
Q  315 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatcctttta 413  Q
    ||||||||  ||| |||||||||||||||  ||||||| ||||||||||  ||||  |||||||||| |||||||||||||||||||||| |||||| |     
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| ||||||  ||| | |||||||||||||||||| |||||||||||||| ||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctc 27742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 330 - 479
Target Start/End: Complemental strand, 41323132 - 41322983
Alignment:
Q  330 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 429  Q
    |||||| ||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| |||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgtta 41323033  T
Q  430 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     ||||||||||| |||||| |  |||||||  ||||||||||||||||||    
T  41323032 attgttcttagttaaaaattgagttttcggcatacttgatcggattgctc 41322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 306 - 479
Target Start/End: Original strand, 7863544 - 7863717
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||| | |  ||||||| ||||||||||||| ||||||||| |||    
T  7863544 agttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaactttta 7863643  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| | |||| |||||||  ||  |||||||| | ||||||  | |||||||||||||| ||| ||||||||    
T  7863644 tccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctc 7863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 25539142 - 25539038
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 273  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||  |||||||||||||| |||    
T  25539142 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaa 25539043  T
Q  274 ccccc 278  Q
    |||||    
T  25539042 ccccc 25539038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 330 - 475
Target Start/End: Complemental strand, 25539019 - 25538873
Alignment:
Q  330 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctt 428  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||| ||||||    |||||||||||| ||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  429 acttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    || | |||||||||||||||  | ||||| ||||||||||| |||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatt 25538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 53894190 - 53894108
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtt 251  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  53894190 taaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 479
Target Start/End: Complemental strand, 14474268 - 14474103
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||| ||| ||||||| |||||||  | ||||| ||||||||||| |||| | ||| ||  |||||||||||||||||||| || |||||| |    
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaaga-acaatattaatcttcctaaccctcatccttct 14474170  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| ||||||| |||| |||||||  |||||||||   |||||  ||||||||||||||||||||    
T  14474169 attttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctc 14474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 29822775 - 29822864
Alignment:
Q  398 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    |||||| |||||| | |||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaactt 29822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 27879651 - 27879792
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||| |||||||||||| ||| ||||||||||||||| || |||||  |||||||||| || | ||||||| |||| |||||||| ||||||||||| |    
T  27879651 agttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctca 27879750  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaa 447  Q
    |  |||| |||| | ||||| ||| |||||| ||||||||||    
T  27879751 taattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 491
Target Start/End: Original strand, 47456751 - 47456888
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 453  Q
    ||||||||||| ||| | | |||| |||| |||||||||||||||| ||| |||||| | |||| ||||||| |||  | |||||||||||||||  | |    
T  47456751 tttgtaacatggataactagtttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggt 47456850  T
Q  454 tttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||||| ||||||||  ||||||||||    
T  47456851 tttcgggctacttgatcagattgctccgaaacttcccc 47456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 306 - 448
Target Start/End: Original strand, 37222064 - 37222206
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa-tcttcctaactctt 404  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||| ||||||||||| ||| ||| |||| |||| ||||||| ||||| ||| |||     
T  37222064 agttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaa-tctc 37222162  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaat 448  Q
    ||| || | |||||||||||| ||| ||||||||||| ||||||    
T  37222163 atcattctgttttgggtcattgttagttgttcttagtaaaaaat 37222206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 38416536 - 38416642
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||||||||  ||| ||||| |  ||||||||||||| |||| | |||||||||||| ||||||||||| ||| | ||||||||||||||||    
T  38416536 agggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcggattacataatccgaa 38416635  T
Q  272 aaccccc 278  Q
     ||||||    
T  38416636 caccccc 38416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 491
Target Start/End: Original strand, 38417020 - 38417080
Alignment:
Q  431 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttcccc 38417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 49001518 - 49001451
Alignment:
Q  412 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||||||||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  49001518 tattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctc 49001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 42497939 - 42497809
Alignment:
Q  307 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 406  Q
    ||||||||||||||||| ||| |||||||||||||||  | | | | |||||||| | |||||| | |||| |||| ||||||||||| |||||||| ||    
T  42497939 gttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T
Q  407 ccttttattttgggtcattcttacttgttct 437  Q
    | |||| |||| ||||||| ||| |||||||    
T  42497839 cattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 50392599 - 50392529
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    ||||||||||| |||| |||||||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  50392599 aaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 308 - 402
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
    |||| |||||||| ||| || | ||||||||||||| ||||| || ||||||||||  |||| ||||||| ||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 25140570 - 25140466
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||  |||| ||||  | |||| ||| ||| || ||||| |||||||||||||||  ||||||| | ||||||||||||||||||||||| |    
T  25140570 agttcggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctca 25140471  T
Q  406 tcctt 410  Q
    |||||    
T  25140470 tcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 25140779 - 25140687
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    |||||||||||  |||||||||  | |||||||| ||| || ||||| ||||||||||| |||| ||||||  ||||||||||||||||||||    
T  25140779 agttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttccta 25140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 403
Target Start/End: Original strand, 47784101 - 47784188
Alignment:
Q  316 atataatccgaagtgtatcagcacaaatcctaaaca-tatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 403  Q
    |||||||||||| | ||||||||||||| ||||||| | ||||||| ||| |||| ||||||| |||||||||||||| ||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactct 47784188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 346 - 430
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  346 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 430  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||| |||||| | |||||| ||||| ||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 384 - 487
Target Start/End: Complemental strand, 55838978 - 55838875
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 483  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | ||||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaa 55838879  T
Q  484 actt 487  Q
    ||||    
T  55838878 actt 55838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 25140944 - 25140894
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 25140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 484
Target Start/End: Complemental strand, 4936666 - 4936614
Alignment:
Q  432 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaa 484  Q
    |||||||||| ||||||| |||||| |||||| ||||||||||||||| ||||    
T  4936666 tgttcttagttaaaaatctgatttttgggctatttgatcggattgctccaaaa 4936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 480
Target Start/End: Complemental strand, 55774800 - 55774704
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctct 480  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | |||||||||    
T  55774800 atattaatctccctaactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctct 55774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 1788175 - 1788238
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 447  Q
    |||||||||||| ||||||| || ||| | |||| ||||||| ||||||||||||||| |||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaa 1788238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 38416937 - 38417004
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaaca-tgtatagccattttagg 379  Q
    ||||||||||| ||| |||||||||||||||  ||||||| ||||||||| || |||| |||||||||    
T  38416937 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcattttagg 38417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 39118308 - 39118367
Alignment:
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 425  Q
    ||||||| |||| |||| ||||||||||| ||||||||||||||| || ||| |||||||    
T  39118308 atagccagtttaaggaccatattaatcttactaactcttatccttctaatttaggtcatt 39118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 487
Target Start/End: Original strand, 20078719 - 20078832
Alignment:
Q  374 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 473  Q
    |||| |||| |||||||| |||||| |||  |||||| | |||| ||||||| ||| |  ||||||||  |||||| | |||| |||||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  474 ttgctctaaaactt 487  Q
    ||||||| ||||||    
T  20078819 ttgctctgaaactt 20078832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 46381180 - 46381079
Alignment:
Q  358 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 457  Q
    ||||||| ||| ||| |||| |||| |||||||||||| ||||||| || |||   |||| | ||||| ||| || |||||||||||||||| | |||||    
T  46381180 taacatggataaccagtttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T
Q  458 gg 459  Q
    ||    
T  46381080 gg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 2e-97; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 169 - 490
Target Start/End: Original strand, 39447122 - 39447441
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||     
T  39447122 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatct 39447221  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||  ||||||||||||| |||||       |||||||||||||||||| | || ||||||||||||||| |||||||| ||||||||||| ||    
T  39447222 ggaaaccccataaacaccctttttcaaggtaaaa---tagttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggat 39447318  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || |||||||  |||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||||| | ||| | || ||||    
T  39447319 agtcattttaaagacaatattaatcttcctaactctcatccttctattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttg 39447418  T
Q  468 atcggattgctctaaaacttccc 490  Q
    ||||||||||||| |||||||||    
T  39447419 atcggattgctctgaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 32188064 - 32187743
Alignment:
Q  169 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  32188064 taaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatc 32187965  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    || |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| |||||||||||||||  |||| || ||||||||||| |    
T  32187964 cggaaacccccgaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatgga 32187868  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||| |||||||||||| ||||||| ||||||    
T  32187867 tagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactactt 32187768  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  32187767 gatcggattgctccgaaacttcccc 32187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 172 - 459
Target Start/End: Complemental strand, 36949136 - 36948851
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  36949136 agggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 36949037  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||| |||||||       ||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  36949036 aaccccctaaacaccatttgttaaggtaaaa---tagtttggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagc 36948940  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 459  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||| || |||||||    
T  36948939 tattttagggacaatattaatcttcctaactcttatccttttgttttgggtaattgttacctgttcttagtcaaaaattgggttttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 15995308 - 15994987
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatc 267  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  15995308 taaagggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatc 15995209  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    ||||||||||| ||||||||||||| ||| |        ||||||||||||||||| |||| |||||||||| |||| |||||||| ||||||||||| |    
T  15995208 cgaaaaccccctaaacaccctttttcaagctaaaac---agttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatgga 15995112  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    ||| ||||||| |||||||||||||||| |||||||| ||| || | |||||||||||| |||| |||||||||| |||||| |||||||| | ||| ||    
T  15995111 tagtcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactattt 15995012  T
Q  467 gatcggattgctctaaaacttcccc 491  Q
    |||||||||||||  ||||||||||    
T  15995011 gatcggattgctccgaaacttcccc 15994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 33452637 - 33452329
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  33452637 taaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatcc 33452538  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||| ||| ||||||||||||| |||||        |||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||| ||    
T  33452537 ggaaactccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggat 33452441  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    |  ||||||||||||||||||||||||||||||||| || ||||| ||||||||| || |||  |||||||||||||||||||| |||  || |||||||    
T  33452440 aatcattttagggacaatattaatcttcctaactctcattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggtttctggactacttg 33452341  T
Q  468 atcggattgctc 479  Q
    ||||||||||||    
T  33452340 atcggattgctc 33452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 170 - 490
Target Start/End: Complemental strand, 41510622 - 41510304
Alignment:
Q  170 aaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| |||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  41510622 aaagggtgaaaaaaatgagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatct 41510523  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| |||||||| |||| |||||        ||| |||||||||||||| ||| ||||||||||||| | |||||||| ||||||||||| ||    
T  41510522 ggaaaccccctaaacaccccttttcaaggtaaaac---agtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-at 41510427  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||  || |||||||||||||||    
T  41510426 agtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttg 41510327  T
Q  468 atcggattgctctaaaacttccc 490  Q
    ||||||||||||  |||||||||    
T  41510326 atcggattgctccgaaacttccc 41510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 169 - 459
Target Start/End: Complemental strand, 44465922 - 44465633
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat-gtttcccgattacataatc 267  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||   ||||||||| ||    
T  44465922 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactc 44465823  T
Q  268 cgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    || |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||      
T  44465822 cggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggt 44465726  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 459  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | |||||||||||||||| | |||||||    
T  44465725 tagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctcttcttagtcaaaaatcaggttttcgg 44465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 169 - 448
Target Start/End: Complemental strand, 45153985 - 45153708
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45153985 taaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 45153886  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||        ||||  |||||||||||  ||| ||||||||||||| |  ||||||| ||||||||||| ||    
T  45153885 ggaaaccccctaaacaccctttttcaaggtaaaac---agtttagattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggat 45153789  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaat 448  Q
    || ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||| |||| ||||||||||| |||||    
T  45153788 agtcattttagggacaatattaatcttcttaactctcatccttctgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 169 - 457
Target Start/End: Complemental strand, 17474993 - 17474707
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  17474993 taaaaggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatcc 17474894  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||  ||||| |||||        |||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||    
T  17474893 ggaaaccccctaaacacaatttttcaaggtaaaac---agtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggat 17474797  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 457  Q
    || |||||||| |||||||||||||||||||||||| ||  || | || || | |||| |||| ||||||| |||||||||||| |||||    
T  17474796 agtcattttagagacaatattaatcttcctaactctcataattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttc 17474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 201 - 491
Target Start/End: Complemental strand, 41855061 - 41854778
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 299  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||| |||||      
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaa 41854962  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
          |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||     |||| ||||| |||||||||||||||||||||||    
T  41854961 aac---agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaa 41854870  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||| |||||| | ||||| |||||| |||  |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  41854869 ctctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttcccc 41854778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 201 - 491
Target Start/End: Original strand, 42894369 - 42894657
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 299  Q
    |||||| | ||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||      
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
          ||| ||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||||| |||  |||||||||||||||||||||||||||||    
T  42894469 aac---agtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaa 42894565  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||  ||||| | |||||||||||| |||| ||||||||| |||||||||  ||||||| ||||||||||||||| |||  ||||||||||    
T  42894566 ctctcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttcccc 42894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 25217984 - 25217660
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  25217984 taaagggtgaaaaaatgagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatcc 25217885  T
Q  269 gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataat----------------ccgaagtgtatcagcacaaatcctaaacat 352  Q
    | ||||||| |||||||| |||| |||||        |||||||||||||||||                | ||| ||||| ||||||||| ||||||||    
T  25217884 ggaaacccctaaacaccccttttcaaggtaaaac---agttcggattatataattgtagataatataatccggaactgtattagcacaaattctaaacat 25217788  T
Q  353 atttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcgg 451  Q
     |||||| |||| |||| |||||| |||||||| |||||||||||||||||  ||||| |  |||||||||||| |||| |||||||||| |||||||||    
T  25217787 gtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgtttttgggtcattgttacctgttcttagtaaaaaatcgg 25217688  T
Q  452 attttcgggctacttgatcggattgctc 479  Q
     |||||||||||||||||||||||||||    
T  25217687 gttttcgggctacttgatcggattgctc 25217660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 174 - 491
Target Start/End: Original strand, 5507381 - 5507699
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttc--ccgattacataatccgaa 271  Q
    ||||||||||||||| || | ||||| || |||||||||||| |||||||||||||||| | ||||||||||||| |||   | ||||| ||||||||||    
T  5507381 ggtgaaaaaatgagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaa 5507480  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
     |||||| ||||||| ||| ||||||        ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  5507481 caccccctaaacaccttttcttaagg--aaaaaatagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 5507578  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    |||||||   |||||||||||||||  |||||| || ||| | ||||||||||||  ||| |||||||||||||||||| | ||||||||| ||||||||    
T  5507579 cattttataaacaatattaatcttcacaactctcattcttctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatc 5507678  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||  ||||||||||    
T  5507679 ggattgctccgaaacttcccc 5507699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 201 - 479
Target Start/End: Original strand, 36874977 - 36875253
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccca-aacacccttttttaaggtnn 299  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |  |||||| ||||| |||||      
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  300 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
          ||| ||||||||||||||| || ||||| |||| |||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  36875077 aac---agtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaa 36875173  T
Q  400 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||| |||||| | |||||||||||| ||||  |||||||| |||||||||| ||||| | |||||| |||| |||||||    
T  36875174 ctctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctc 36875253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 195 - 491
Target Start/End: Complemental strand, 41203354 - 41203060
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 292  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||  ||||| || ||||  |||||||||||||||| |||||  |||||||||||||     
T  41203354 tttttccggattttgtaatccggaaactacaaaaaaatagggtgc--tacataatttttctggattacataatccgaacaccccgtaaacacccttttta 41203257  T
Q  293 aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatc 392  Q
    |||          ||||| |||||||||| ||||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||||||||||||||    
T  41203256 aag--agaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatc 41203159  T
Q  393 ttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||| | |||||| | |||||||||||| |||| |||||||||| |||||| |||||||||||| |||||||||||||||||  ||||||||||    
T  41203158 ttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttcccc 41203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 174 - 479
Target Start/End: Original strand, 34517066 - 34517369
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 273  Q
    ||||||||||||||| |||  ||||| ||||||||||||||  ||||  |||||||||||||||||||||||||| ||||  ||||||||||||| || |    
T  34517066 ggtgaaaaaatgagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgatttttcg-gattacataatccaaata 34517164  T
Q  274 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 372  Q
    ||||  ||||||| ||||| ||||         |||| ||||||||||||||||| ||||||||||||||| |||||||| |  |||||||| |||| ||    
T  34517165 ccccttaaacaccatttttcaagggaaaaac--agtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtca 34517262  T
Q  373 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgg 472  Q
    ||||| | |||||||||||| || ||||| | |||||||| |||||||||||| |||| ||||||||||||||||| || |||||||  |||||||||||    
T  34517263 ttttatgaacaatattaatcatcataactttcatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcgg 34517362  T
Q  473 attgctc 479  Q
    |||||||    
T  34517363 attgctc 34517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 19110068 - 19109892
Alignment:
Q  312 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 411  Q
    ||||||||||||| || | |||||||||||||  |||| || ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||||||    
T  19110068 gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttt 19109969  T
Q  412 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 488  Q
    |||||||||||||| |||  ||||||||||||||||||   |||| || |||||||||||||||||||  |||||||    
T  19109968 tattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttc 19109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 16750485 - 16750318
Alignment:
Q  307 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 406  Q
    |||||||||||||||| |||| |||||||||| |||| ||||  || ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||| ||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcat 16750388  T
Q  407 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 476  Q
    |||| | |||||||||||| |||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  16750387 ccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattg 16750318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 306 - 469
Target Start/End: Original strand, 8388746 - 8388909
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| || ||||||||||| || ||||| ||| ||||||||||||||||||||||||| |    
T  8388746 agttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctca 8388845  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    |||||   |||||||||||| ||   ||||||||||| |||||||| |||||| ||||||||||    
T  8388846 tccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 4268416 - 4268303
Alignment:
Q  185 gagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaaca 283  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  |||||    
T  4268416 gagtaatgggttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaaca 4268317  T
Q  284 cccttttttaaggt 297  Q
    |||||||| |||||    
T  4268316 ccctttttcaaggt 4268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 313 - 479
Target Start/End: Original strand, 35251032 - 35251198
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    |||||||||||| || ||||| ||||||||| || |   | ||||||| ||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |    
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| ||||||| ||| |||||||||||| |||||| | |||||||||||||||||| ||||||||    
T  35251132 attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctc 35251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 30763804 - 30763927
Alignment:
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| || | |||| ||||||| |||  |||||||||||||||||| |||||| |||| |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  466 tgatcggattgctctaaaacttcc 489  Q
    ||||||||||||||  ||||||||    
T  30763904 tgatcggattgctccgaaacttcc 30763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 491
Target Start/End: Original strand, 42478846 - 42479023
Alignment:
Q  314 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 413  Q
    |||||||||| ||| |||||||||||||||  | |   ||||||||| ||  ||| ||| |||| |||| |||||||||||||||||||| |||||| |     
T  42478846 ttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaactctcatccttatg 42478945  T
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||| ||||||| |||   ||||| ||||||||||    |||||||||||||||||| ||||||||| ||||||||||    
T  42478946 ttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaacttcccc 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 9847619 - 9847495
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||| |||||||||||||| || | ||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||| |  ||||||||||||    
T  9847619 taaagagtgaaaaaatgagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatcc 9847520  T
Q  269 gaaaacc-cccaaacaccctttttt 292  Q
    ||| |||  ||||||||| ||||||    
T  9847519 gaacaccatccaaacaccttttttt 9847495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 491
Target Start/End: Complemental strand, 38308840 - 38308706
Alignment:
Q  358 taacatgtatagccattttagggacaatattaatcttccta--actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 455  Q
    ||||||| || | ||||||| ||||||||||||||||| ||  ||| | |||||| | ||||||||| || |||| ||||||||||||||||||||  ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  456 tcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||| ||||||||| ||||||||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttcccc 38308706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 313 - 487
Target Start/End: Original strand, 45293743 - 45293916
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||| ||| ||||||||||||||| || | | || || ||||||| ||| ||  |||| ||   |||||||||||||||||||| ||| || |    
T  45293743 attatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcatctttct 45293841  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
     |||| |||||||  || ||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  45293842 gttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaaactt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 33366920 - 33366996
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 278  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||| ||||| |||||||||||||||||||||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaa-taagacgcgttacatgatatttccggattacataatccgaaaaccccc 33366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 395
Target Start/End: Complemental strand, 38066834 - 38066643
Alignment:
Q  202 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnn 301  Q
    ||||||| |||||||||||||||||||||||||| | |||| ||||| ||| | |||||||||| || || ||||  |||||||| |||| ||||         
T  38066834 ggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacccaaacacccataaacaccccttttcaagg--gaa 38066737  T
Q  302 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 395  Q
        |||||  ||||||||| |||||  |||| | ||||||| ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||    
T  38066736 aaacagttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttc 38066643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 475
Target Start/End: Original strand, 26228160 - 26228330
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    |||||||| ||||||||| |||| |||||||||| | ||  | ||  | ||||| ||||| ||| | | ||||  ||| ||||||||||| ||||||||     
T  26228160 tagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaactctc 26228259  T
Q  405 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    |||||||| |||| ||| ||| ||| |||||||||||||||||||   |||||| ||||||||||| ||||    
T  26228260 atccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagatt 26228330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 354 - 480
Target Start/End: Complemental strand, 37773827 - 37773700
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc--gg 451  Q
    ||||||||||| ||||||| |||| |||| || |||||||| |||||||| |||||| | |||| | ||||| ||| |||||||||||||||| ||  |     
T  37773827 tttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagt 37773728  T
Q  452 attttcgggctacttgatcggattgctct 480  Q
    ||||| ||||||||||||| |||||||||    
T  37773727 atttt-gggctacttgatcagattgctct 37773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 38308954 - 38308880
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    |||| |||||||||||||||||||||||||||||||| ||  |||| ||||| ||||| |||||||||| |||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacacccc 38308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 17766846 - 17766784
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  17766846 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatcctt 17766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 414 - 487
Target Start/End: Complemental strand, 13704763 - 13704690
Alignment:
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    |||| ||| ||| ||| ||||| | ||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  13704763 ttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 25715323 - 25715427
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataat 266  Q
    |||||||||||||||||||| ||   |||||   |||| |||||||||| ||||  |||||| |||||||||||||| |||| ||| | |||||||||||    
T  25715323 taaagggtgaaaaaatgagttacaaattttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataat 25715422  T
Q  267 ccgaa 271  Q
    |||||    
T  25715423 ccgaa 25715427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 9847440 - 9847386
Alignment:
Q  345 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
    ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  9847440 ctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaa 9847386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 34519554 - 34519492
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||| | ||||||    
T  34519554 aacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatcctt 34519492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 479
Target Start/End: Original strand, 27670723 - 27670764
Alignment:
Q  438 tagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctc 27670764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 479
Target Start/End: Complemental strand, 38065528 - 38065463
Alignment:
Q  414 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    |||||||| ||| |||| |||||||||| ||||||  ||||||| ||||| |||||||||||||||    
T  38065528 ttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctc 38065463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 9847229 - 9847167
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||| ||||| | ||||||    
T  9847229 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatcctt 9847167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 1e-95; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 178 - 491
Target Start/End: Original strand, 20891544 - 20891855
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||    
T  20891544 aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaacccc 20891643  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
    | ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||    
T  20891644 ctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttt 20891740  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 476  Q
    ||||| ||||||||||||||||||||| |||||| | |||||||| ||| |||| | |||||||||||||||||| ||||| ||||||||||||||||||    
T  20891741 agggataatattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattg 20891840  T
Q  477 ctctaaaacttcccc 491  Q
    |||  ||||||||||    
T  20891841 ctccgaaacttcccc 20891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 178 - 479
Target Start/End: Original strand, 38871602 - 38871901
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||     
T  38871602 aaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccct 38871701  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
    | ||||| | ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||    
T  38871702 ctaaacatcttttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttt 38871798  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 476  Q
    |||||||||| |||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||| |||||||||    
T  38871799 agggacaataataatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattg 38871898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 172 - 479
Target Start/End: Original strand, 15799150 - 15799455
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15799150 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaa 15799249  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| || ||        | ||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  15799250 aaccccctaaacaccctttttcaacgtaaaac---atttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 15799346  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||| ||||||||||| ||||||||| ||  |||||| | |||||||||||| |||| |||||||||||||||||||| ||| |||||||||||| |    
T  15799347 cattttatggacaatattattcttcctaattcgcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgacc 15799446  T
Q  471 ggattgctc 479  Q
    |||||||||    
T  15799447 ggattgctc 15799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 174 - 479
Target Start/End: Original strand, 6156658 - 6156961
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 273  Q
    |||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  6156658 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaa 6156757  T
Q  274 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 372  Q
    ||||| ||||||||| ||| |||||         |||||||||||||||| |||| |||||||||| |||| |||||||| ||||||||||| |||| ||    
T  6156758 ccccctaaacaccctctttcaaggtaaaacc---gttcggattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtca 6156854  T
Q  373 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgg 472  Q
    ||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||| |||||||||| ||||| ||| |||| |||||||||||||||    
T  6156855 ttttagggacaatattaatcttcctaactctcatccttctgtttttggtcattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcgg 6156954  T
Q  473 attgctc 479  Q
    |||||||    
T  6156955 attgctc 6156961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 38692982 - 38692662
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatc 267  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  38692982 taaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatc 38692883  T
Q  268 cgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    || ||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  38692882 cggaaacccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 38692786  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    |  ||||||| ||||||||||||| ||| ||||||| ||| || | |||||||||||| ||||   |||||||||||||||||| ||||||| |||||||    
T  38692785 aatcattttaaggacaatattaatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttg 38692686  T
Q  468 atcggattgctctaaaacttcccc 491  Q
     |||||||||||  ||||||||||    
T  38692685 gtcggattgctccgaaacttcccc 38692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 169 - 479
Target Start/End: Original strand, 39524698 - 39525006
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||| || || |||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| | ||||||||||| |    
T  39524698 taaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattc 39524797  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||||||    
T  39524798 ggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtat 39524894  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||| ||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| ||||| || ||||||  |||||||    
T  39524895 agtcattttaggaacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttg 39524994  T
Q  468 atcggattgctc 479  Q
    ||| ||||||||    
T  39524995 atcagattgctc 39525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 4064916 - 4064598
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||||| |    
T  4064916 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccgga 4064817  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||        |||||| ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| ||||     
T  4064816 aaccccctaaacaccctttttcaaggtaaaac---agttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagt 4064720  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||| ||||||||||||||| | |||||| || |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  4064719 cattttagggacaatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgat 4064620  T
Q  470 cggattgctctaaaacttcccc 491  Q
     |||||||||  ||||||||||    
T  4064619 tggattgctccgaaacttcccc 4064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 28083577 - 28083269
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  28083577 taaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatcc 28083478  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||| | ||||||||||||| || ||        ||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||    
T  28083477 ggaaaccctctaaacaccctttttcaacgtaaaac---agtccggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggat 28083381  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || |||||||||||||||||||||||| |||||| | |||||| | |||| ||||||| |||| |||||||||  ||||||||  ||||||| |||||||    
T  28083380 agtcattttagggacaatattaatctttctaactttcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttg 28083281  T
Q  468 atcggattgctc 479  Q
    ||||||||||||    
T  28083280 atcggattgctc 28083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 33487535 - 33487853
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||| |    
T  33487535 agggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccgga 33487634  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||| ||| |||||||| |||| |||||        |||||||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| ||||     
T  33487635 aactccctaaacaccccttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagt 33487731  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||| |||||||||||||||||||  |||||||||||||||||    
T  33487732 cattttagggacaatattaatcttcctaactctcatccttcagtttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgat 33487831  T
Q  470 cggattgctctaaaacttcccc 491  Q
    ||  ||||||  ||||||||||    
T  33487832 cgatttgctccgaaacttcccc 33487853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 203 - 491
Target Start/End: Complemental strand, 31221504 - 31221218
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnn 301  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||| | ||||||||||||| |||||        
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T
Q  302 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
        ||||||||||||||||||| || |||||||||||||||  ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  31221404 c---agttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaact 31221308  T
Q  402 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    || ||| || | |||||||||||| |||| |||||||||| |||||  || |||||||||||||||||||||||||||  ||||||||||    
T  31221307 ctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttcccc 31221218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 12465302 - 12464998
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||   |||||| |    
T  12465302 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccgga 12465206  T
Q  272 aacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    |||||| ||||||| |||||| ||||       |||||| || ||||||||||||         ||||||||||||||||||||||||| ||||||||      
T  12465205 aacccctaaacaccatttttttaggtaaaa---tagttctgagtatataatccga---------gcacaaatcctaaacatatttgtaatatgtatagtt 12465118  T
Q  372 attttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcg 471  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||| | |||||||||||    
T  12465117 attttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcg 12465018  T
Q  472 gattgctctaaaacttcccc 491  Q
    ||||||||| ||||| ||||    
T  12465017 gattgctctgaaactacccc 12464998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 15957672 - 15957991
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| ||||||| || ||||||||||||||||||| || ||||||| ||||||||||||  ||||||||||||||| ||||| |||||||    
T  15957672 taaagggtgaaaaa-tgagtaatggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatcc 15957770  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| |||||||| |||| |||||        |||| ||||||||||||| ||| |||||||| |||||| |||||||| ||||||||||  ||    
T  15957771 ggaaaccccctaaacacccattttcaaggtaaaac---agtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagat 15957867  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    ||  ||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||| |||||||||||||||||| | ||||||| |||||||    
T  15957868 agtaattttagggacaatattaatcttcctaactctggttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttg 15957967  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  15957968 atcggattgctccgaaacttcccc 15957991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 195 - 479
Target Start/End: Complemental strand, 32842145 - 32841861
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 293  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || || ||||  |||||||||||||||| |||||  ||||||||||||| |    
T  32842145 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacaccctttttca 32842046  T
Q  294 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatc 392  Q
    |||         ||||||||||||||||| |||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||| |||||||||||    
T  32842045 agggaaaaac--agttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatc 32841948  T
Q  393 ttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||||||||| |||||| ||||||| |||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32841947 ttcctaactctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctc 32841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 173 - 405
Target Start/End: Complemental strand, 26190493 - 26190263
Alignment:
Q  173 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 272  Q
    ||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |  ||    
T  26190493 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaa 26190394  T
Q  273 accccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 371  Q
    |||||| |||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26190393 accccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 26190297  T
Q  372 attttagggacaatattaatcttcctaactctta 405  Q
    |||||| ||| ||| ||||| |||||||||||||    
T  26190296 attttaaggataattttaatattcctaactctta 26190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 173 - 479
Target Start/End: Complemental strand, 37183977 - 37183672
Alignment:
Q  173 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 272  Q
    ||||||||||||||||||| | ||||||  ||||||||||||   ||||||||||||||||||| ||||||||||| ||| | |||||||||||||| ||    
T  37183977 gggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaa 37183878  T
Q  273 accccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    |||| | |||||||||||||| ||||         |||  ||||||||||||| ||| ||||||| ||||||| ||||| || ||||||||||| ||||     
T  37183877 accctctaaacacccttttttcaaggcaaaac---agtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagt 37183781  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||    
T  37183780 cattttatggacaatattaatcttcctaactctcatctttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatc 37183681  T
Q  471 ggattgctc 479  Q
    |||||||||    
T  37183680 ggattgctc 37183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 169 - 491
Target Start/End: Original strand, 38372231 - 38372543
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||| |    
T  38372231 taaagggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattc 38372330  T
Q  269 gaaaacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||  ||| ||||||||| |||||        ||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||| ||||| ||    
T  38372331 ggaaaccccttaaataccctttttcaaggtaaaac---agttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggat 38372427  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||||||| ||  ||         |||||| |||| |||||||||| |||||| || |||||||||||||||    
T  38372428 agtcattttagggacaatattaatcttcctaactctcataatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttg 38372519  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||| ||||  ||||||||||    
T  38372520 atcggatcgctccgaaacttcccc 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 171 - 490
Target Start/End: Complemental strand, 40620187 - 40619865
Alignment:
Q  171 aagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccga 270  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||||||||||||     
T  40620187 aagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccgg 40620088  T
Q  271 aaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    |||||||| ||||| | ||||| |||||       || ||| |||||||||||||||| |||||||| |||||| ||||||||  |||||||||| | |     
T  40620087 aaaccccctaaacatcatttttcaaggt---aaaatatttcagattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaa 40619991  T
Q  370 ccattttagggacaatattaatcttcctaactcttat-ccttttattttgggtcattcttacttgttc----ttagtcaaaaatcggattttcgggctac 464  Q
     ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||| |||||    ||||||||||||||| ||| ||| ||||    
T  40619990 tcattttagggacaatattaatcttcctaactctcatcccttctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactac 40619891  T
Q  465 ttgatcggattgctctaaaacttccc 490  Q
    ||| |||||||| ||  |||||||||    
T  40619890 ttggtcggattgttccgaaacttccc 40619865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 169 - 490
Target Start/End: Complemental strand, 24203879 - 24203564
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24203879 taaagggtggaaaaatgattaacagattttttcggattttgtaatcg----acttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 24203784  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||||| |||        ||||||| |||||||||||||| |||||||||| |||| |||||||| ||||||||  | ||    
T  24203783 ggaaaccccctaaacacccttttttagggtaaaac---agttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggat 24203687  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    |  ||||||| ||||||||||||| ||||||||||| | |||| | |||||| ||||| |||| |||||||||| |||||| |  ||||||||||| |||    
T  24203686 aatcattttaaggacaatattaatgttcctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttg 24203587  T
Q  468 atcggattgctctaaaacttccc 490  Q
    ||||||||||||  |||||||||    
T  24203586 atcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 217 - 490
Target Start/End: Original strand, 29862582 - 29862854
Alignment:
Q  217 aaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggatt 315  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||| |||    
T  29862582 aaaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcgaatt 29862678  T
Q  316 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttat 414  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||||    |    
T  29862679 atataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgtt 29862778  T
Q  415 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    ||||||||||| |||| ||||||||||||||||||   |||||||||||||||||  ||||||||  |||||||||    
T  29862779 tttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 175 - 392
Target Start/End: Original strand, 25746954 - 25747168
Alignment:
Q  175 gtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-gaaaa 273  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||     
T  25746954 gtgaaaaaatgagtaacggatttttccggattttctaatccggaaacttc-aaaaatagggcgcgttacatgatgttttcggattacataatccggaaat 25747052  T
Q  274 cccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 373  Q
    |||| ||||||| |||||||||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||    
T  25747053 cccctaaacaccattttttaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 25747149  T
Q  374 tttagggacaatattaatc 392  Q
    ||||||||||| |||||||    
T  25747150 tttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 306 - 491
Target Start/End: Original strand, 7884250 - 7884435
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||| ||||||||||| ||| ||||||| ||||||| ||||| || ||||||| |||||| | ||||||||||||||||||||||||||||||||| |    
T  7884250 agttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctca 7884349  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||| | |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  7884350 tccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccc 7884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 31929304 - 31929004
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||  ||| |||||||||||||||||                  ||||||||||||    
T  31929304 taaagggtgaaaaa-tgagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgc------------------attacataatcc 31929224  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| ||    
T  31929223 ggaaaccccctaaacaccccttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggat 31929127  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||| ||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||| ||||| | | |||||||||||||||    
T  31929126 agtcattttagg-acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcgggctacttg 31929028  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  31929027 atcggattgctccgaaacttcccc 31929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 172 - 479
Target Start/End: Original strand, 27212633 - 27212934
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||| ||| | |||||||||| | |||    
T  27212633 agggtgaaaaaatgagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaa 27212732  T
Q  272 aac-ccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
     || |||  |||||||||||| ||||         ||||||||||||||||| |||| | |||||| ||||||  ||||||| ||||||||||  ||||     
T  27212733 cacaccctgaacaccctttttgaagg--gaaaaacagttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagt 27212830  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    |||     | ||||||||||||||||||||||| |||||| |  |||| |||||| |||| |||||||||||||||||||| ||||||| ||| |||||     
T  27212831 cat-----gaacaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgatt 27212925  T
Q  471 ggattgctc 479  Q
    |||||||||    
T  27212926 ggattgctc 27212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 326 - 491
Target Start/End: Original strand, 14111944 - 14112107
Alignment:
Q  326 aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 425  Q
    ||||||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||  ||||||||||| |||    
T  14111944 aagtgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcc--ttattttgggttatt 14112041  T
Q  426 cttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
     ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||    
T  14112042 gttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttcccc 14112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 203 - 491
Target Start/End: Original strand, 26095047 - 26095334
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnn 301  Q
    ||||||||||||| |||||  |||||||||| |||||||||||  | ||| | |||||||||||||||| |||||  |||||| |||||| || |         
T  26095047 gattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactctttttcaaag--gaa 26095144  T
Q  302 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
       ||||||||||||||||||| ||| ||||||| || |||| |||||||| ||||||||||| |||| ||| ||| ||||||||||||||||| |||||    
T  26095145 aaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaact 26095244  T
Q  402 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    || || ||| ||||||| |||||| ||   |||| | ||| ||||||||| |||| |||||||||| || ||||||||  ||||||||||    
T  26095245 ctcattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttcccc 26095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 306 - 491
Target Start/End: Original strand, 12847500 - 12847685
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||||| ||| |||||||||| ||||||||||||||| || ||||| ||||||||||  |||  ||||||| |||||||||||||||||| ||||||      
T  12847500 agttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctcg 12847599  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |  || | |||||| ||||| |||  |||||||||||||||||||  ||||||||||||||||||  ||| |||| ||||||||||    
T  12847600 tatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttcccc 12847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 306 - 479
Target Start/End: Original strand, 13908605 - 13908778
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||||||| ||||||| || ||||  ||||||| ||||||||| | |||| ||||||| ||||||||||||||||| ||||  | |    
T  13908605 agttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttca 13908704  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||| | ||||| |||||| |||  ||||||| |||||||||| | ||||| | |||||||||||||||||||    
T  13908705 tccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctc 13908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 37095110 - 37094991
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||  ||||||||    
T  37095110 agggtgaaaaatggagttacggatttttccggattttgtaatccgaaaactt-aaaaaataaggcgcgttacatgatgtttccggattaccaaatccgaa 37095012  T
Q  272 aacccccaaacaccctttttt 292  Q
    |||||  ||||||||||||||    
T  37095011 aacccttaaacaccctttttt 37094991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 172 - 292
Target Start/End: Original strand, 26319043 - 26319163
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||| |||||||||||||||| ||||| ||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  26319043 agggtgaaaaatggagttacggatttttccggattttgttatccggaaacttccaaaa-tagggtgcgttacatgatgtttccggattacataatccgaa 26319141  T
Q  272 aaccccc-aaacaccctttttt 292  Q
    ||||||| ||||||||||||||    
T  26319142 aaccccctaaacaccctttttt 26319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 306 - 491
Target Start/End: Original strand, 23269391 - 23269579
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagca---caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
    ||||| |||||||||||||||| | ||||| ||   ||| | || ||||| ||||||||||| | |  ||||||| ||||||||||||||||||||||||    
T  23269391 agttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactc 23269490  T
Q  403 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    | || ||| |||| ||||| ||  |||  |||||||| ||||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  23269491 tcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaacttcccc 23269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 309 - 479
Target Start/End: Original strand, 27158144 - 27158314
Alignment:
Q  309 tcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 408  Q
    ||||||||||||||| ||| |||||||||||||||  | ||||| |||| |||||| |||| ||||||| |||||||||||| ||||||||  || ||||    
T  27158144 tcggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T
Q  409 ttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||   |||||||||||| ||| ||||| ||| | ||||||  | ||||| |||||||||||| ||||||||    
T  27158244 ttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctc 27158314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 26898790 - 26898694
Alignment:
Q  383 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||||||||||||||||||||| |||||| | ||||| |||||| |||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctc 26898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 34440688 - 34440779
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 292  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||    
T  34440688 cggattttgtaatccgaaaacttcaaaaa-taggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacaccctttttt 34440779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 14111851 - 14111942
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa-cccccaaacacccttttt 291  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||| |||||||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttttt 14111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 306 - 489
Target Start/End: Complemental strand, 40613739 - 40613556
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||||||| ||||| |||| ||||  | ||||| ||||||||||| |||   |||||| ||||| ||||||||||||||||| | |    
T  40613739 agttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttca 40613640  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    ||||| | | || |||||||  ||  |||||||||| |||||||   |||| | ||||||||||| ||||||||  ||||||||    
T  40613639 tccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcc 40613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 41639557 - 41639385
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||| ||||||||||||||||| ||||||||||||||| || |   | ||||||||||  ||| ||| ||||  |||||||||||| | ||||||||| |    
T  41639557 agtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctca 41639458  T
Q  406 tccttttattttgggtcattcttacttgttcttagt---caaaaatcggattttcgggctacttgatcggatt 475  Q
    || |||| |||| ||||||| ||| |||||||||||    ||||||| ||||||| |||||||||||| ||||    
T  41639457 tctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 8032219 - 8032321
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc-cccaaacaccctttttta 293  Q
    ||||| |||||||||||||| | ||| ||||||||||||||| | ||||||||| ||||| |||||||||||||||| ||| || ||||||||||||| |    
T  8032219 ttttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacaccctttttca 8032318  T
Q  294 agg 296  Q
    |||    
T  8032319 agg 8032321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 417
Target Start/End: Original strand, 21070429 - 21070534
Alignment:
Q  312 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 411  Q
    ||||||||||||| || || ||||| |||||| || ||||||||||||||||  |||| ||||||| ||||||||||||||||| |||| || |||| ||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatccatt 21070528  T
Q  412 tatttt 417  Q
    ||||||    
T  21070529 tatttt 21070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 8739050 - 8738938
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    |||||||||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||     
T  8739050 tagttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctc 8738951  T
Q  405 atccttttatttt 417  Q
    |||| | ||||||    
T  8738950 atccctgtatttt 8738938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 36359784 - 36359661
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| ||||| ||||  |||| |||||||||||||||  |||  |||||||||||| ||||| ||||||| ||| | ||||||||||||     
T  36359784 taaagggtgaaaaa-tgagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatct 36359686  T
Q  269 gaaaaccccc-aaacaccctttttt 292  Q
    |||||||||| ||||||| ||||||    
T  36359685 gaaaaccccctaaacaccttttttt 36359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 479
Target Start/End: Complemental strand, 6800984 - 6800818
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||  ||| |||||||||| ||||  | ||||| |||| |||||| | || ||||||| |||||||  |||||||||| | ||| |||||| |    
T  6800984 attatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttct 6800885  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     |||| ||||||| |||  |||||||||||||||||| | ||||||  ||||||||||  |||||||    
T  6800884 gttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctc 6800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 26190267 - 26190201
Alignment:
Q  425 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  26190267 tcttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttcccc 26190201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 27494217 - 27494123
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 400  Q
    |||||||||||  | |||| || || | |||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  27494217 agttcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  384 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 483  Q
    ||||||||||||||||||| ||||||| | |||| ||||||| ||| ||||| ||||||||||||  ||||||| | ||| |||||| ||||||||  ||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  484 acttccc 490  Q
    |||||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 16429339 - 16429443
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||  |||||| || |  |||||||| ||| || ||||| ||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  16429339 agttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactctta 16429438  T
Q  406 tcctt 410  Q
    |||||    
T  16429439 tcctt 16429443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 26093502 - 26093618
Alignment:
Q  305 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 404  Q
    |||||| ||||||||||||| || | |||||||| ||||  | ||||| ||| ||||||| |||| ||||||| |||||| |||||||||| |||||||     
T  26093502 tagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctc 26093601  T
Q  405 atccttttattttgggt 421  Q
    |||||| | ||||||||    
T  26093602 atccttctgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 489
Target Start/End: Original strand, 26622170 - 26622350
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||||||||||||||| |||| |||||||||||||||    ||  | ||||||||||   || |||  ||| |||| ||||||| |||||||||| | |    
T  26622170 agttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacatag-taaccagattaaggaccatattaaacttcctaactttca 26622268  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    ||||| |||||| ||| ||| ||| |||||  |||||||||||| | ||||||| |||||||||| ||||||||  ||||||||    
T  26622269 tccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcc 26622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 38640676 - 38640767
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 292  Q
    |||||||| ||||| | |||  |||||||||||||||||||| ||||| | | | |||||||||||||||| ||||| ||||||||||||||    
T  38640676 cggattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccctaaacaccctttttt 38640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 308 - 410
Target Start/End: Complemental strand, 8739250 - 8739148
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    |||||||||  |||||| || || | |||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||| |||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  408 ctt 410  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 1350374 - 1350290
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 390  Q
    ||||||||||||||||| | || | ||||| ||||||| |||||||| ||||||||||| ||| |||||||| ||| ||||||||    
T  1350374 agttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 308 - 479
Target Start/End: Original strand, 41253359 - 41253530
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    ||||||||||||||| |||| |||| |||||| |||  | ||| | ||||||||||| ||| | | |||| | || |||||||||||||||||| | |||    
T  41253359 ttcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatc 41253458  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    ||  | |||| ||||||| ||| |||||| || | |||||||  | || ||||| |||||||| ||||||||    
T  41253459 ctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctc 41253530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 28445231 - 28445169
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||    
T  28445231 aacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatcctt 28445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 7036677 - 7036758
Alignment:
Q  388 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||| ||| || ||||||| ||  ||||||  ||| ||||||| ||||||||||||| |||||    
T  7036677 taatcttcctaactcttatccttctatattaggtcattgttggttgttcacagttaaaaatctgattttcgggctatttgat 7036758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 34529976 - 34530029
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  34529976 ttttttcggattttgtaatccaaaaacctcaaaaaatagggcgtgttacatgat 34530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 34530300 - 34530367
Alignment:
Q  334 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 401  Q
    |||||| ||| || ||||| |||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaact 34530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 8973631 - 8973569
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||| ||||||||||| |||  ||||||| |||||||||||| |||||||||||| ||||||    
T  8973631 aacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatcctt 8973569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 28108308 - 28108350
Alignment:
Q  174 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccg 216  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  28108308 ggtgagaaaatgagtaacgggtttttccagattttgtaatccg 28108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 394
Target Start/End: Complemental strand, 28445578 - 28445381
Alignment:
Q  201 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc---aaacacccttttttaa-gg 296  Q
    ||||||||||||||||||||  ||||||||||||||||| || ||||  ||| | ||||| | |||||||| |||| |   ||||||| |||||| | ||    
T  28445578 cggattttgtaatccgaaaatctcaaaaaatagggcgcgctaaatgaatttttcagattataaaatccgaacaccctccctaaacaccattttttcatgg 28445479  T
Q  297 tnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctt 394  Q
    |        |||||||||||  ||||||| |    | |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  28445478 taccgatgcagttcggattacgtaatccggacatcaccagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctt 28445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 11186234 - 11186097
Alignment:
Q  311 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||||||||||||| |||||||||| |||| || |   ||||||||||||| ||| ||  ||||  ||| |||||||| ||| | ||||| ||||||    
T  11186234 ggattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatcctt 11186135  T
Q  411 ttattttgggtcattcttacttgttcttagtcaaaaat 448  Q
     | |||| ||| ||| |||  |||||||||| ||||||    
T  11186134 ctgttttaggtaattgttagatgttcttagtaaaaaat 11186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 16429168 - 16429240
Alignment:
Q  345 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 417  Q
    |||||||| ||||||||||| |||| |||||||  || |||| |||||||| ||||||| |||||| ||||||    
T  16429168 ctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatccttgtatttt 16429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 11186341 - 11186303
Alignment:
Q  203 gattttgtaatccgaaaacttcaaaaaatagggcgcgtt 241  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  11186341 gattttataatccgaaaacctcaaaaaatagggcgcgtt 11186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 38641033 - 38641083
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 398  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||    
T  38641033 aacatgtttgtaacatagatagtcattttaaggacaatattaatcttccta 38641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 43388259 - 43388189
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 248  Q
    ||||||||||| |||| || ||  ||||||||||||||| |||  | |||||||||||||| |||||||||    
T  43388259 aaaaaatgagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgat 43388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 2e-91; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 17264373 - 17264690
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  17264373 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 17264472  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||||||||| |||||       ||||||||||||||||||| ||| ||||||||||||||| |||||||| |||| ||||||  |||     
T  17264473 aaccccctaaacaccctttttcaaggt---aaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagt 17264569  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    |||||||||||||||||| |||||||||||||| |||||| | ||||| |||||| |||| |||||||||| |||||| |  |||| ||||||||||||     
T  17264570 cattttagggacaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagttaaaaattgagtttttgggctacttgatg 17264669  T
Q  471 ggattgctctaaaacttcccc 491  Q
    |||||||||  ||||||||||    
T  17264670 ggattgctccgaaacttcccc 17264690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 169 - 478
Target Start/End: Complemental strand, 14587759 - 14587452
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  14587759 taaagggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatcc 14587660  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
      |||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||| ||    
T  14587659 ataaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggat 14587563  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||  ||||||| ||||||||||    
T  14587562 agtcattttacggacaatattaatcttcctaactctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttg 14587463  T
Q  468 atcggattgct 478  Q
    || ||||||||    
T  14587462 attggattgct 14587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 172 - 489
Target Start/End: Complemental strand, 4508498 - 4508183
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||| ||||||| |||||||||||||||| ||||| |||||||| |    
T  4508498 agggtgaaaaaatgagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccgga 4508399  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    || |||| ||||| | ||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||||     
T  4508398 aatcccctaaacaacttttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagt 4508302  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||||||||||||||||||||||||||| | |||||| | |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||     
T  4508301 cattttagggacaatattaatcttcctaactttcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatt 4508202  T
Q  471 ggattgctctaaaacttcc 489  Q
    |||||||||  ||||||||    
T  4508201 ggattgctccgaaacttcc 4508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 23406759 - 23407077
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||| ||||||||| |||| |||||||| |||||||||||||||||||||||||  |||||||||  |||||||||||||| |    
T  23406759 agggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccgga 23406858  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    ||||||| ||||||| ||||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  23406859 aaccccctaaacaccatttttcaaggtaaaac---agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 23406955  T
Q  371 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
    ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||    
T  23406956 cattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattattacttgttcttagtcaaaaatcaagttttcgggctacttgat 23407055  T
Q  470 cggattgctctaaaacttcccc 491  Q
      ||||||||  ||||||||||    
T  23407056 ttgattgctccgaaacttcccc 23407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 3717482 - 3717173
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||     
T  3717482 taaagggtgaaaaaatgagtaatgggcttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatct 3717383  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | ||||| || ||||||  ||||| |||||        |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||| ||    
T  3717382 ggaaacctcctaaacacaatttttcaaggtaaaac---agttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggat 3717286  T
Q  368 agccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctactt 466  Q
    || ||||||||||||||||||||| || |||||||| |||||| |  |||||||||||| |||| |||||||||||||||||||| ||||| | ||||||    
T  3717285 agtcattttagggacaatattaatttttctaactctcatccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactactt 3717186  T
Q  467 gatcggattgctc 479  Q
    |||||||||||||    
T  3717185 gatcggattgctc 3717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 172 - 491
Target Start/End: Complemental strand, 2813422 - 2813103
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggat--tttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg 269  Q
    |||||||||||  |||| || | |||||||||||  ||||||||||| ||||||||||||||| || | |||||||||||||||| ||||||||||||||    
T  2813422 agggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccg 2813323  T
Q  270 aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtata 368  Q
     |||||||| ||||||||||||| |||||         |||||||| |||||||||||| ||||||| ||||||| |||||||||||| ||||||| |||    
T  2813322 gaaaccccctaaacaccctttttcaaggtaaaacg---gttcggat-atataatccgaactgtatcaccacaaattctaaacatatttttaacatgaata 2813227  T
Q  369 gccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    | ||||||| ||| ||||||||||||||||||||| ||||||    |||||||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  2813226 gtcattttatggataatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttg 2813127  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  2813126 atcggattgctccgaaacttcccc 2813103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 172 - 491
Target Start/End: Original strand, 5699521 - 5699846
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| |    
T  5699521 agggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 5699620  T
Q  272 aaccccc-aaacacccttttttaaggtnnnnnnnt----agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgta 366  Q
    ||||||| ||||||||||||| |||||       |    | ||| |||||||||||||||| ||||| | ||||||| ||||| || ||||||||||| |    
T  5699621 aaccccctaaacaccctttttcaaggtaatacagttcagatttcagattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatgga 5699720  T
Q  367 tagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    ||| ||||||| ||||||||||||||||| ||||||| |||||| |  |||||||||||| |||| | ||||||||||||||||||  |||||| |||||    
T  5699721 tagtcattttaaggacaatattaatcttcataactctcatccttctgtttttgggtcattgttacctattcttagtcaaaaatcgggatttcggactact 5699820  T
Q  466 tgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||  ||||||||||    
T  5699821 tgatcggattgctccgaaacttcccc 5699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 170 - 477
Target Start/End: Complemental strand, 1945727 - 1945423
Alignment:
Q  170 aaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg 269  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |  ||||| ||||| |||||| |    
T  1945727 aaagggtgaaaaaatgagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctg 1945628  T
Q  270 aaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    || ||||| |||| || ||||| |||          | ||| |||||||||||||||| |||||| |||||||| |||||||| ||||||||||| ||||    
T  1945627 aacacccctaaaccccatttttcaag---tgaaaacaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatag 1945531  T
Q  370 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 469  Q
     ||||||||||| ||||||||||||||||||||| |||||| | ||||||| |||| |||| |||| ||| |||||||||||||||||||| || |||||    
T  1945530 tcattttagggataatattaatcttcctaactctcatccttctgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgat 1945431  T
Q  470 cggattgc 477  Q
    ||||||||    
T  1945430 cggattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 226 - 487
Target Start/End: Original strand, 5638879 - 5639138
Alignment:
Q  226 aaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatcc 324  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||  ||| ||||||||||||| |||||        |||||||||||||||||||    
T  5638879 aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaac---agttcggattatataatcc 5638975  T
Q  325 gaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 424  Q
    ||| |||||||||||| ||| ||||||| | |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  5638976 gaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatccttttgttttgagtcat 5639075  T
Q  425 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    | |||| |||||||| ||||||||||| ||| ||||||||||| || ||||||||| ||||||    
T  5639076 tgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactt 5639138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 178 - 470
Target Start/End: Complemental strand, 24604552 - 24604261
Alignment:
Q  178 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 277  Q
    ||||||||||| | || |||||||| |||||||||||| |||||||||||||||||||||  ||||||||| | | | |||||||||||||||| |||||    
T  24604552 aaaaaatgagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacacccc 24604453  T
Q  278 c-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttt 376  Q
      ||||||| ||||| ||||         |||||  ||||||||||| ||| | ||||||||||||| ||||||||||||||||||   |||| ||||||    
T  24604452 ttaaacaccatttttcaagggaaaaac--agttcatattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcatttt 24604355  T
Q  377 agggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    || |||||||||||||||||||||| | |||||| | ||||| |||||| |||| |||||||||||||||||||| |||| |||||||||||||    
T  24604354 agagacaatattaatcttcctaactttcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggtttttgggctacttgatc 24604261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 176 - 369
Target Start/End: Original strand, 32035080 - 32035266
Alignment:
Q  176 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc 275  Q
    |||||||  |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  32035080 tgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacc 32035179  T
Q  276 ccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 369  Q
    ||| |||||||||||||||||||       |||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  32035180 ccctaaacacccttttttaaggt---aaaatagttcggattatataatc-----tgtatcagcacaaatcctaaacatatttgtaacatgtatag 32035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 7412788 - 7412916
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  7412788 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatcc 7412887  T
Q  269 gaaaacccccaaacacccttttttaaggt 297  Q
    ||||||||| ||||||||||||| |||||    
T  7412888 gaaaacccctaaacaccctttttcaaggt 7412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 256 - 479
Target Start/End: Original strand, 2539498 - 2539719
Alignment:
Q  256 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 354  Q
    |||||||||||| | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| | |||| |||||||| || ||||| |    
T  2539498 gattacataatctggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactctatccgcacaaattctgaacatgt 2539594  T
Q  355 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 454  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||| |||| ||||| ||  ||    
T  2539595 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagtt 2539694  T
Q  455 ttcgggctacttgatcggattgctc 479  Q
    ||||| |||||||||||||||||||    
T  2539695 ttcggactacttgatcggattgctc 2539719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 344 - 491
Target Start/End: Complemental strand, 21515057 - 21514910
Alignment:
Q  344 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtca 443  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| ||||||||||||    
T  21515057 cctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtca 21514958  T
Q  444 aaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  21514957 aaaatcggattttcggactacttgatcggattgctccgaaacttcccc 21514910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 306 - 489
Target Start/End: Original strand, 29519374 - 29519557
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||| | |    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    ||||| |||||||||||||| |||| ||||||| |||||||||||| |||||| |||||||||||  |||||||  ||||||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcc 29519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 195 - 488
Target Start/End: Original strand, 9905104 - 9905392
Alignment:
Q  195 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 293  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||| |||| ||||| |||||||||||||||| |||||| |||| || |  || |    
T  9905104 tttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatcattca 9905203  T
Q  294 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatc 392  Q
    |||        ||||| ||||||||||| ||      |||||||||||||  ||||||| ||||||||||| |||  ||||||||||| ||||||||||     
T  9905204 agg--gaaaaatagtttggattatataaccca-----tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaatt 9905296  T
Q  393 ttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 488  Q
    ||||| |||||||||||| | ||||| |||||| ||||   |||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  9905297 ttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 306 - 479
Target Start/End: Complemental strand, 13801091 - 13800918
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||||||||| |||||| ||| ||||| |||| |||| |||||||| ||||||||||  ||   ||||||| | ||||||||||||||||||||||| |    
T  13801091 agttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctca 13800992  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
    || || | |||||||||||| ||| |||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13800991 tcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctc 13800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 7734390 - 7734221
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    ||||| ||||||||||| |||| |||||||  |||||| |||||||| ||||||||| | || | ||||||| ||||||||||||||||||||||| | |    
T  7734390 agttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatca 7734291  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
    ||||||| |||||| ||||| |||  |||||||  ||||||||| | |||||||||||||||||| ||||    
T  7734290 tccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 465  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| | |||||||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  466 tg 467  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 34528558 - 34528718
Alignment:
Q  329 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 428  Q
    |||||||||||||||  | ||||| ||||||||||| |||  ||||| | ||| |||||||||||| |||||||| || ||| | |||||||||||| ||    
T  34528558 tgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattatt 34528657  T
Q  429 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    |  |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  34528658 agctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcc 34528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 29289687 - 29289504
Alignment:
Q  308 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 407  Q
    |||||||||||||||| ||| |||||||||||||||  | ||||| ||||||||||  |||   |||||| ||||||||||||| ||||||||||  |||    
T  29289687 ttcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatc 29289588  T
Q  408 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||| | |||| ||||||| |||  |||||||||||||||||| | |||||| |||||||||||  |||||||  ||||||||||    
T  29289587 cttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttcccc 29289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 33413542 - 33413417
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| |||  |||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| | |    
T  33413542 agggtgaaaaatggagttacgaatttttctgaattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccagattacataatctgga 33413444  T
Q  272 aaccccc-aaacacccttttttaaggt 297  Q
    ||||||| ||||| ||||||| |||||    
T  33413443 aaccccctaaacaacctttttcaaggt 33413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 313 - 488
Target Start/End: Complemental strand, 6704183 - 6704009
Alignment:
Q  313 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 412  Q
    ||||||||||||||| ||| | ||||||||| | |||  ||||||||||||| ||| | | |||| ||||||||||||||||||||||||| ||| ||      
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  413 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 488  Q
    ||||| ||||||| |||  ||||  | |||||||||| | ||||||| ||| |||||| ||||||||| |||||||    
T  6704083 attttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctctgaaacttc 6704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 306 - 490
Target Start/End: Complemental strand, 14038026 - 14037845
Alignment:
Q  306 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 405  Q
    |||||||||||||||| ||||| ||||||||||||||| || |   | ||||||||||| ||| ||  ||||  ||| |||||||||||| ||||    |    
T  14038026 agttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaacc---a 14037930  T
Q  406 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 490  Q
    ||||| | |||| ||||||| ||| |||||||||||||||||||   |||||| ||||||||||| |||||||| ||||| ||||    
T  14037929 tccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatccc 14037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 316 - 487
Target Start/End: Original strand, 236899 - 237069
Alignment:
Q  316 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 415  Q
    ||||||| |||| | |||||||||||||  | ||||| ||||||||||| | |  ||||||| |||| |||||||||||||||||||| ||| || ||||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatt 236998  T
Q  416 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 487  Q
    || ||||||| ||| ||||| | |||| |||| |  || ||| || || |||||||||||||||| ||||||    
T  236999 ttaggtcattgttagttgttttcagtcgaaaa-ccaatattcaggttatttgatcggattgctctgaaactt 237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 478
Target Start/End: Original strand, 16450355 - 16450481
Alignment:
Q  352 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 451  Q
    ||||||||||||| ||| ||| |||| |||  |||||||||||||||| ||| ||| || | |||| ||||||| |||  |||||||||||||||||  |    
T  16450355 tatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttg 16450454  T
Q  452 attttcgggctacttgatcggattgct 478  Q
     |||| ||||||||||||| |||||||    
T  16450455 gtttttgggctacttgatcagattgct 16450481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 448 - 491
Target Start/End: Complemental strand, 33413408 - 33413365
Alignment:
Q  448 tcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33413408 tcggattttcgggctacttgatcggattgctctgaaacttcccc 33413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 479
Target Start/End: Original strand, 3365808 - 3365933
Alignment:
Q  354 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 453  Q
    ||||||||||| ||| | | |||| |||  |||||||||||||||||| | |||||| | |||| ||||||| ||| ||||||  | ||||||||| | |    
T  3365808 tttgtaacatggataacaagtttaaggaacatattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggt 3365907  T
Q  454 tttcgggctacttgatcggattgctc 479  Q
    |||| || |||||||||  |||||||    
T  3365908 tttcaggttacttgatcatattgctc 3365933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 21517670 - 21517572
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||||||| |||||| ||||||||||||          | |||| |||||||||||||| | ||||| |||||||| ||||||||||| |    
T  21517670 taaagggtgaaaaaatgaataacggatttttccggatt----------acaactccaaaaaatagggcgtgctacataatgtttccggattacataattc 21517581  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 490
Target Start/End: Complemental strand, 10310427 - 10310311
Alignment:
Q  374 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 473  Q
    |||| |||| |||||||||||||||||| | || ||| |||||| ||| ||| | | ||||||| |||||||||||  |||||  ||||||||| || ||    
T  10310427 tttaaggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcaga 10310328  T
Q  474 ttgctctaaaacttccc 490  Q
    ||| ||  |||||||||    
T  10310327 ttgttccgaaacttccc 10310311  T

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Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 17501003 - 17501054
Alignment:
Q  348 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 399  Q
    ||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  17501003 aacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaa 17501054  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 489
Target Start/End: Original strand, 7412971 - 7413028
Alignment:
Q  432 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 489  Q
    ||||||||| |||||||| | ||||||| ||| |||||||||||||||  ||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttcc 7413028  T

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Target: scaffold0027 (Bit Score: 162; Significance: 5e-86; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 142161 - 141843
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc 268  Q
    |||||||||||||| || ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  142161 taaagggtgaaaaa-tgtgtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 142063  T
Q  269 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 367  Q
    | |||||||| ||||||||||||| |||||       | |||  |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||    
T  142062 ggaaaccccctaaacaccctttttcaaggtaaaa---ttgttgagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggat 141966  T
Q  368 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 467  Q
    || ||||||||||||||||||||||||||||||||  |||||| |  ||||||||||| || | |||||||||||||||||||| ||||| | |||||||    
T  141965 agtcattttagggacaatattaatcttcctaactcccatccttct-gtttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttg 141867  T
Q  468 atcggattgctctaaaacttcccc 491  Q
    ||||||||||||  ||||||||||    
T  141866 atcggattgctccgaaacttcccc 141843  T

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Target: scaffold0137 (Bit Score: 152; Significance: 4e-80; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 172 - 487
Target Start/End: Complemental strand, 9693 - 9380
Alignment:
Q  172 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 271  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9693 agggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaa 9594  T
Q  272 aaccccca-aacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 370  Q
    |||||||  |||||||||||| || ||        |||||||||||||||||||||| |||||||||| |||| ||| |||| ||||||||||| ||||     
T  9593 aaccccctgaacaccctttttcaaagtaaaac---agttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagt 9497  T
Q  371 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 470  Q
    ||||||| ||||||||||||| ||  ||||| | ||| || | |||||||||||| |||| |||||||||| |||||||||||||||||  |||||||||    
T  9496 cattttatggacaatattaatatttataactttcatcattctgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatc 9397  T
Q  471 ggattgctctaaaactt 487  Q
    |||||||||| ||||||    
T  9396 ggattgctctgaaactt 9380  T

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Target: scaffold0508 (Bit Score: 147; Significance: 4e-77; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 169 - 491
Target Start/End: Complemental strand, 3596 - 3273
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataat 266  Q
    ||||||||||||||||||||||||  |||||   || |||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3596 taaagggtgaaaaaatgagtaacgaattttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataat 3497  T
Q  267 ccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgt 365  Q
    ||| |||||||  ||||||||||||| |||||        |||||||||||||||||| ||| |||||| || ||||| |||||||| ||||||||||      
T  3496 ccggaaaccccataaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcg 3400  T
Q  366 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctac 464  Q
    |||  ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||| |||||||||||||||  ||||||| | ||||||||||||    
T  3399 ataatcattttagggacaatattaatcttcgtaactctcatccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctac 3300  T
Q  465 ttgatcggattgctctaaaacttcccc 491  Q
    |||||| ||||||||| ||||||||||    
T  3299 ttgatcagattgctctgaaacttcccc 3273  T

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Target: scaffold0010 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 346 - 491
Target Start/End: Original strand, 140620 - 140765
Alignment:
Q  346 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaa 445  Q
    ||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  446 aatcggattttcgggctacttgatcggattgctctaaaacttcccc 491  Q
    |||||| ||||| | |||||||||||||||||||  ||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttcccc 140765  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 140568 - 140612
Alignment:
Q  169 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaat 213  Q
    |||| ||||||||||||||||| || |||||||||||||||||||    
T  140568 taaaaggtgaaaaaatgagtaaaggatttttccggattttgtaat 140612  T

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Target: scaffold0182 (Bit Score: 66; Significance: 9e-29; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 23092 - 23205
Alignment:
Q  179 aaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 278  Q
    ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||||||| ||||| |||||||| ||||||||    
T  23092 aaaaatgagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccc 23191  T
Q  279 -aaacacccttttt 291  Q
     ||||||| |||||    
T  23192 taaacacctttttt 23205  T

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Target: scaffold0182; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 23228 - 23301
Alignment:
Q  337 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||| | |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

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Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 475
Target Start/End: Complemental strand, 60028 - 59865
Alignment:
Q  312 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 411  Q
    |||||||||||  ||| |||| ||||||||||  | ||||| ||||||||||  |||| |||||||  ||||||||||||||||||||||| |      |    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactcatggatagt 59929  T
Q  412 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 475  Q
     ||||| ||||||| |||   ||||||||||||||||  |||||||||| ||||||||| ||||    
T  59928 cattttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatt 59865  T

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Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 59480 - 59551
Alignment:
Q  331 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 402  Q
    |||||| ||||||  ||||||| ||||| ||||| |||| ||||||| |||||||||||||||| |||||||    
T  59480 tatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4978 - 4910
Alignment:
Q  1 aactcatagttggggaccaatctattacttttgttgaggttgttgctgggaattacaagcgattgcatttttaaataa 78  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||| ||| ||||||||||||||||||    
T  4978 aactcatagttggggaccaatctattactttt---------gttgctgggaattataagtgattgcatttttaaataa 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 479
Target Start/End: Original strand, 4471 - 4639
Alignment:
Q  311 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 410  Q
    ||||||||||||| ||| |||||| ||||||||  | ||| | ||||||| ||  |||| |||||||  ||| |||||||||||| ||||  | ||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  411 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 479  Q
     | |||  ||||||| ||| |||||| ||||| |||||  | |||| | |||| |||||||||||||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctc 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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