View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21289_high_8 (Length: 272)

Name: NF21289_high_8
Description: NF21289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21289_high_8
NF21289_high_8
[»] chr1 (42 HSPs)
chr1 (5-150)||(18438427-18438572)
chr1 (5-150)||(18449285-18449430)
chr1 (5-150)||(18454378-18454523)
chr1 (166-261)||(5845503-5845599)
chr1 (152-262)||(11828201-11828310)
chr1 (155-261)||(41459215-41459322)
chr1 (155-261)||(13147457-13147565)
chr1 (168-261)||(23603455-23603549)
chr1 (152-261)||(26606760-26606870)
chr1 (203-261)||(36183858-36183916)
chr1 (152-221)||(3941151-3941221)
chr1 (152-193)||(45943727-45943768)
chr1 (169-261)||(50269122-50269215)
chr1 (204-261)||(50513930-50513987)
chr1 (171-254)||(23604252-23604336)
chr1 (229-261)||(38878535-38878567)
chr1 (152-191)||(13633902-13633941)
chr1 (152-263)||(16270026-16270137)
chr1 (154-189)||(23276111-23276146)
chr1 (155-221)||(41804037-41804104)
chr1 (154-189)||(42572762-42572797)
chr1 (156-221)||(1167564-1167630)
chr1 (143-189)||(3944009-3944055)
chr1 (143-189)||(3993835-3993881)
chr1 (152-202)||(6562868-6562918)
chr1 (152-189)||(3728770-3728807)
chr1 (152-189)||(8548670-8548707)
chr1 (152-189)||(13636123-13636160)
chr1 (152-189)||(15051349-15051386)
chr1 (152-189)||(22524161-22524198)
chr1 (152-189)||(23359350-23359387)
chr1 (152-189)||(24364726-24364763)
chr1 (152-189)||(26633562-26633599)
chr1 (152-189)||(29424415-29424452)
chr1 (152-189)||(29425337-29425374)
chr1 (152-189)||(29438021-29438058)
chr1 (152-189)||(36072404-36072441)
chr1 (152-189)||(44336284-44336321)
chr1 (152-189)||(46217319-46217356)
chr1 (152-189)||(52802165-52802202)
chr1 (229-261)||(5844638-5844670)
chr1 (153-189)||(26879297-26879333)
[»] chr2 (26 HSPs)
chr2 (1-121)||(31320110-31320230)
chr2 (168-262)||(40055338-40055433)
chr2 (203-261)||(37893423-37893481)
chr2 (152-189)||(41183225-41183262)
chr2 (143-191)||(5351724-5351772)
chr2 (171-258)||(19848140-19848228)
chr2 (156-261)||(25515813-25515920)
chr2 (150-189)||(2983435-2983474)
chr2 (203-261)||(37893148-37893206)
chr2 (152-185)||(435381-435414)
chr2 (232-261)||(7780416-7780445)
chr2 (152-189)||(12908430-12908467)
chr2 (152-189)||(17424167-17424204)
chr2 (152-189)||(22003402-22003439)
chr2 (152-189)||(23347329-23347366)
chr2 (152-201)||(24601662-24601711)
chr2 (152-201)||(24612403-24612452)
chr2 (152-189)||(25184831-25184868)
chr2 (152-189)||(26543990-26544027)
chr2 (152-189)||(28468676-28468713)
chr2 (152-189)||(40221131-40221168)
chr2 (152-189)||(41565353-41565390)
chr2 (152-189)||(43536137-43536174)
chr2 (152-189)||(43982234-43982271)
chr2 (154-261)||(17911135-17911243)
chr2 (153-189)||(28477069-28477105)
[»] chr8 (22 HSPs)
chr8 (152-262)||(40039685-40039796)
chr8 (152-262)||(40039087-40039198)
chr8 (203-261)||(5680469-5680527)
chr8 (152-193)||(26451511-26451552)
chr8 (152-189)||(32383206-32383243)
chr8 (152-189)||(32437161-32437198)
chr8 (216-261)||(33482725-33482770)
chr8 (229-261)||(27411633-27411665)
chr8 (152-195)||(40077251-40077294)
chr8 (143-189)||(8419439-8419485)
chr8 (152-221)||(21406269-21406339)
chr8 (152-221)||(21800761-21800831)
chr8 (143-189)||(32375686-32375732)
chr8 (152-194)||(41016444-41016486)
chr8 (152-189)||(184553-184590)
chr8 (152-189)||(22550866-22550903)
chr8 (152-189)||(26663034-26663071)
chr8 (152-189)||(34366946-34366983)
chr8 (152-189)||(42602495-42602532)
chr8 (231-259)||(21175745-21175773)
chr8 (153-189)||(36677931-36677967)
chr8 (152-184)||(38134405-38134437)
[»] chr7 (19 HSPs)
chr7 (152-261)||(20353931-20354040)
chr7 (143-189)||(30791000-30791046)
chr7 (152-185)||(17838689-17838722)
chr7 (197-262)||(20353330-20353395)
chr7 (152-193)||(47060957-47060998)
chr7 (156-200)||(31324811-31324855)
chr7 (152-195)||(17840891-17840934)
chr7 (166-260)||(36805500-36805595)
chr7 (152-195)||(42499438-42499481)
chr7 (143-189)||(45767853-45767899)
chr7 (155-200)||(8522140-8522185)
chr7 (152-189)||(9367725-9367762)
chr7 (152-189)||(15070390-15070427)
chr7 (152-189)||(18105408-18105445)
chr7 (152-189)||(30355240-30355277)
chr7 (152-189)||(35606824-35606861)
chr7 (229-261)||(7953836-7953868)
chr7 (152-200)||(36781450-36781498)
chr7 (152-192)||(41047809-41047849)
[»] chr5 (23 HSPs)
chr5 (152-258)||(27532618-27532725)
chr5 (1-57)||(31609957-31610013)
chr5 (47-149)||(31609846-31609936)
chr5 (170-261)||(30966053-30966144)
chr5 (152-193)||(18307285-18307326)
chr5 (152-189)||(38968130-38968167)
chr5 (153-189)||(35926397-35926433)
chr5 (152-199)||(3603149-3603196)
chr5 (152-195)||(25890023-25890066)
chr5 (156-206)||(42099087-42099137)
chr5 (152-189)||(1035219-1035256)
chr5 (152-189)||(7757360-7757397)
chr5 (152-189)||(13837759-13837796)
chr5 (152-189)||(13838425-13838462)
chr5 (154-195)||(17966889-17966930)
chr5 (152-189)||(19037471-19037508)
chr5 (152-189)||(28238174-28238211)
chr5 (152-189)||(28388520-28388557)
chr5 (152-189)||(30708874-30708911)
chr5 (152-188)||(27659976-27660012)
chr5 (151-191)||(30705167-30705207)
chr5 (153-189)||(38855713-38855749)
chr5 (166-221)||(42098305-42098361)
[»] chr4 (37 HSPs)
chr4 (152-262)||(26791609-26791721)
chr4 (170-261)||(40335155-40335247)
chr4 (152-261)||(41933623-41933733)
chr4 (167-258)||(48578172-48578264)
chr4 (171-261)||(35075927-35076018)
chr4 (167-263)||(14297106-14297202)
chr4 (167-263)||(14315355-14315451)
chr4 (152-254)||(11084008-11084111)
chr4 (175-263)||(72529-72618)
chr4 (152-189)||(16984162-16984199)
chr4 (229-262)||(31242830-31242863)
chr4 (154-189)||(9013874-9013909)
chr4 (152-211)||(11494556-11494615)
chr4 (152-191)||(26932617-26932656)
chr4 (203-261)||(36003608-36003666)
chr4 (154-188)||(49422171-49422205)
chr4 (152-189)||(958595-958632)
chr4 (152-189)||(6178111-6178148)
chr4 (152-189)||(9890029-9890066)
chr4 (152-189)||(15995757-15995794)
chr4 (152-189)||(19069222-19069259)
chr4 (152-189)||(21022889-21022926)
chr4 (152-201)||(21470926-21470975)
chr4 (152-189)||(30726742-30726779)
chr4 (152-189)||(31425319-31425356)
chr4 (152-201)||(33383828-33383877)
chr4 (152-189)||(37022062-37022099)
chr4 (152-189)||(37563281-37563318)
chr4 (152-189)||(39590569-39590606)
chr4 (152-189)||(39773439-39773476)
chr4 (152-189)||(40358281-40358318)
chr4 (152-189)||(41795357-41795394)
chr4 (152-189)||(44561331-44561368)
chr4 (152-189)||(49094119-49094156)
chr4 (152-189)||(54634016-54634053)
chr4 (198-261)||(30836652-30836716)
chr4 (152-184)||(31242786-31242818)
[»] chr6 (18 HSPs)
chr6 (156-261)||(31496196-31496302)
chr6 (156-261)||(31501582-31501688)
chr6 (156-256)||(32555593-32555693)
chr6 (156-218)||(3380775-3380838)
chr6 (204-258)||(32555064-32555118)
chr6 (155-261)||(33052499-33052605)
chr6 (154-189)||(28362734-28362769)
chr6 (156-257)||(31480328-31480430)
chr6 (203-261)||(31516943-31517001)
chr6 (152-189)||(6204862-6204899)
chr6 (152-189)||(9048110-9048147)
chr6 (152-189)||(9049085-9049122)
chr6 (152-189)||(11691829-11691866)
chr6 (152-189)||(13382664-13382701)
chr6 (152-189)||(18351644-18351681)
chr6 (152-189)||(22305143-22305180)
chr6 (152-189)||(26712083-26712120)
chr6 (152-189)||(28249920-28249957)
[»] chr3 (44 HSPs)
chr3 (156-261)||(45507402-45507508)
chr3 (203-261)||(45506605-45506663)
chr3 (152-261)||(2830990-2831100)
chr3 (152-254)||(31890243-31890345)
chr3 (151-193)||(42760209-42760251)
chr3 (154-222)||(30256006-30256075)
chr3 (152-201)||(52570567-52570616)
chr3 (156-259)||(51325944-51326048)
chr3 (152-187)||(29929463-29929498)
chr3 (152-187)||(29978617-29978652)
chr3 (152-191)||(48566375-48566414)
chr3 (156-190)||(16861190-16861224)
chr3 (143-189)||(30943224-30943270)
chr3 (86-128)||(38992365-38992407)
chr3 (155-189)||(49196453-49196487)
chr3 (152-261)||(50604421-50604531)
chr3 (152-189)||(2647700-2647737)
chr3 (152-189)||(9429850-9429887)
chr3 (152-189)||(19341079-19341116)
chr3 (152-189)||(19440291-19440328)
chr3 (152-189)||(20918012-20918049)
chr3 (152-189)||(20926974-20927011)
chr3 (152-189)||(29918342-29918379)
chr3 (152-189)||(29967495-29967532)
chr3 (152-189)||(32593113-32593150)
chr3 (152-189)||(34049115-34049152)
chr3 (152-189)||(35743583-35743620)
chr3 (152-189)||(36812872-36812909)
chr3 (152-189)||(41579725-41579762)
chr3 (152-189)||(41803033-41803070)
chr3 (152-189)||(41844365-41844402)
chr3 (152-189)||(42756194-42756231)
chr3 (152-189)||(43476227-43476264)
chr3 (152-189)||(44227147-44227184)
chr3 (152-189)||(46697746-46697783)
chr3 (154-191)||(48566401-48566438)
chr3 (152-189)||(50477215-50477252)
chr3 (232-261)||(51326726-51326755)
chr3 (152-189)||(54389830-54389867)
chr3 (152-200)||(1294078-1294126)
chr3 (153-189)||(3501897-3501933)
chr3 (154-190)||(16861162-16861198)
chr3 (229-257)||(40872040-40872068)
chr3 (152-192)||(51402399-51402439)
[»] scaffold0794 (1 HSPs)
scaffold0794 (152-189)||(5306-5343)
[»] scaffold0494 (3 HSPs)
scaffold0494 (152-193)||(862-903)
scaffold0494 (152-191)||(890-929)
scaffold0494 (152-189)||(5366-5403)
[»] scaffold0143 (1 HSPs)
scaffold0143 (216-261)||(3906-3951)
[»] scaffold0050 (1 HSPs)
scaffold0050 (81-128)||(67649-67696)
[»] scaffold0341 (1 HSPs)
scaffold0341 (152-202)||(18058-18108)
[»] scaffold0744 (1 HSPs)
scaffold0744 (152-189)||(424-461)
[»] scaffold0634 (1 HSPs)
scaffold0634 (152-189)||(7453-7490)
[»] scaffold0038 (1 HSPs)
scaffold0038 (152-189)||(50082-50119)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 18438572 - 18438427
Alignment:
Q  5 tttactcttctttgcagtttcatgtggtgaaactagatagttagatgcatctggaaaatgagagttgttatgagcttcagagtcagtttcagggcccaat 104  Q
    ||||||||||||  |||||||||||||||||||||||| |||| ||| |||| | ||||||||||||| ||||||||||||||||||||||||| |||||    
T  18438572 tttactcttcttcacagtttcatgtggtgaaactagatggttaaatgtatctaggaaatgagagttgtgatgagcttcagagtcagtttcagggtccaat 18438473  T
Q  105 gtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 150  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  18438472 gtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18438427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 18449430 - 18449285
Alignment:
Q  5 tttactcttctttgcagtttcatgtggtgaaactagatagttagatgcatctggaaaatgagagttgttatgagcttcagagtcagtttcagggcccaat 104  Q
    ||||||||||||  |||||||||||||||||||||||| |||| ||| |||| | ||||||||||||| ||||||||||||||||||||||||| |||||    
T  18449430 tttactcttcttcacagtttcatgtggtgaaactagatggttaaatgtatctaggaaatgagagttgtgatgagcttcagagtcagtttcagggtccaat 18449331  T
Q  105 gtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 150  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  18449330 gtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18449285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 18454523 - 18454378
Alignment:
Q  5 tttactcttctttgcagtttcatgtggtgaaactagatagttagatgcatctggaaaatgagagttgttatgagcttcagagtcagtttcagggcccaat 104  Q
    ||||||||||||  |||||||||||||||||||||||| |||| ||| |||| | ||||||||||||| ||||||||||||||||||||||||| |||||    
T  18454523 tttactcttcttcacagtttcatgtggtgaaactagatggttaaatgtatctaggaaatgagagttgtgatgagcttcagagtcagtttcagggtccaat 18454424  T
Q  105 gtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 150  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  18454423 gtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18454378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 5845503 - 5845599
Alignment:
Q  166 cgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||||||||||||||| ||| | ||||| |||| |||||||| ||||||||| |  |||||||||||||||||||||||||||| ||||    
T  5845503 cgaggttttcctcggtagttaactgcagccggttttatttttcctcggcagttaactatcgagaggtattttcgtcttttacatgtgtttcttagcc 5845599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 11828201 - 11828310
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 251  Q
    ||||||||||||  ||| ||||| ||||||||||||||||| || ||| | |||| ||||||| ||||||||| || |||||||| |||||||| |||||    
T  11828201 cggcagttaactgccgaagtttttctcggtagttaactaca-tcggttctatttttctcggcagttaactatcgaagggtatttttgtcttttatatgtg 11828299  T
Q  252 tttctcagcct 262  Q
    ||| |||||||    
T  11828300 tttttcagcct 11828310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 41459215 - 41459322
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtt 253  Q
    |||||||||  |||||||||||||||||||||||| |||   ||||| |||| |||||||| |||||| || |  |||||||| || |||||||||||||    
T  41459215 cagttaactgccgaggttttcctcggtagttaactgcagctggttttatttttcctcggcagttaactgtcgaggggtattttggtattttacatgtgtt 41459314  T
Q  254 tctcagcc 261  Q
    ||||||||    
T  41459315 tctcagcc 41459322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 13147565 - 13147457
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaactacagtcagt--tttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgt 252  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||  | | |||||||| ||| ||||||| | | || ||||| |||||||||| |||||    
T  13147565 cagttaactgtcgaggttttcctcggtagttaactgcagtcggttctattttttcctcagcagttaactaccgagtgatatttccgtcttttacttgtgt 13147466  T
Q  253 ttctcagcc 261  Q
    || ||||||    
T  13147465 ttttcagcc 13147457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 23603549 - 23603455
Alignment:
Q  168 aggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||| ||||||||| ||||| ||||| |||| || ||||| |||||||   |  ||||||||||||||||| |||||||||||||||    
T  23603549 aggttttcctcgatagttaactgcagtctgttttatttttccccggcagttaactactgaggggtattttcgtcttttatatgtgtttctcagcc 23603455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 26606870 - 26606760
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgt-tttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||  ||| ||||||||||||||||||||  ||||||||| || ||||||||||| |||| || | |  |||||||| || ||||||  ||    
T  26606870 cggcagttaactgccgaagttttcctcggtagttaactgtagtcagtttcgtatttcctcggcagttaattaccgaggggtattttggtattttactcgt 26606771  T
Q  251 gtttctcagcc 261  Q
    |||||||||||    
T  26606770 gtttctcagcc 26606760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 36183916 - 36183858
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||| ||||||||| | || ||||||||||| |||||||||||||||||||||    
T  36183916 ttttcctcggtacttaactaccgaaaggtattttcgttttttacatgtgtttctcagcc 36183858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 3941151 - 3941221
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 221  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| |||||| ||  |||||||||| ||||||    
T  3941151 cggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaact 3941221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 45943727 - 45943768
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  45943727 cggcagttaactaccgaagttttcctcggtagttaactacag 45943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 50269122 - 50269215
Alignment:
Q  169 ggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||| ||||| |||||||| ||||| ||||| |||| ||||| |||||||||| | |  ||||||||| ||||||||  |||||||||||||    
T  50269122 ggtttttctcggcagttaactgcagtcggttttctttttcctcgacacttaactaccgaggggtattttcatcttttactcgtgtttctcagcc 50269215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 50513987 - 50513930
Alignment:
Q  204 tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||| || ||||||| | |||||||||||||||||||| |||||||| ||||||    
T  50513987 tttcctcgccagttaactaccgaatggtattttcgtcttttatatgtgtttgtcagcc 50513930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 23604252 - 23604336
Alignment:
Q  171 ttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||||||||||||| ||  | ||||| |||| |||||||| ||||||||  |   |||||||||||||||||||||||||    
T  23604252 ttttcctcggtagttaactgcaaccggttttatttttcctcggcagttaactattgaggagtattttcgtcttttacatgtgttt 23604336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 38878567 - 38878535
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||||||||||||||||||||||||    
T  38878567 ggtattttcgtcttttacatgtgtttctcagcc 38878535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 13633941 - 13633902
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  13633941 cggcagttaactaccgaggttttcctcggcagttaactac 13633902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 16270026 - 16270137
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 251  Q
    ||||||||||||  |||||||||| |||| |||||||| ||| |  || | |||||||||| | ||||| ||| || |||||||| || |||||| | ||    
T  16270026 cggcagttaactgccgaggttttcttcggcagttaactgcagccgtttctattttcctcggtagttaaccatcgaagggtattttggtattttacttatg 16270125  T
Q  252 tttctcagccta 263  Q
    ||| ||||||||    
T  16270126 tttttcagccta 16270137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 23276111 - 23276146
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaact 23276146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 41804037 - 41804104
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaactacagtcag-ttttgttttcctcggcacttaact 221  Q
    |||||||||| ||||||||||||||| |||||||| ||||| | |||||  |||||||||| ||||||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaact 41804104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 42572797 - 42572762
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||| |||||||||||||||||||||||||    
T  42572797 gcagttaactgtcgaggttttcctcggtagttaact 42572762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 1167630 - 1167564
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaact 221  Q
    ||||||||  |||||||||||||| ||||||||| ||||| |||||  |||||||||||| ||||||    
T  1167630 agttaactgccgaggttttcctcgatagttaactgcagtcggttttacttttcctcggcagttaact 1167564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 3944055 - 3944009
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  3944055 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 3944009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 3993835 - 3993881
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  3993835 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 3993881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 6562868 - 6562918
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg 202  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| | ||||||    
T  6562868 cggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttg 6562918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 3728807 - 3728770
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  3728807 cggcagttaactaccgaggttttcctcggcagttaact 3728770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 8548670 - 8548707
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  8548670 cggcagttaactaccgaggttttcctcggcagttaact 8548707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 13636123 - 13636160
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13636123 cggcagttaactaccgaggttttcctcggcagttaact 13636160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 15051349 - 15051386
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15051349 cggcagttaactaccgaggttttcctcggcagttaact 15051386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 22524198 - 22524161
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22524198 cggcagttaactaccgaggttttcctcgggagttaact 22524161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 23359350 - 23359387
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  23359350 cggcagtttactaccgaggttttcctcggtagttaact 23359387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 24364726 - 24364763
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  24364726 cggcagttaactgtcgaggttttcctcagtagttaact 24364763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 26633599 - 26633562
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26633599 cggcagttaactaccgaggttttcctcggcagttaact 26633562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 29424452 - 29424415
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  29424452 cggcagttaactaccgaagttttcctcggtagttaact 29424415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 29425337 - 29425374
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  29425337 cggcagttaactaccgaagttttcctcggtagttaact 29425374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 29438021 - 29438058
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||| || ||||||||||||||||||||||||    
T  29438021 cggcagttaattaccgaggttttcctcggtagttaact 29438058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 36072441 - 36072404
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  36072441 cggcagttaactaccgaggttttcctcggcagttaact 36072404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 44336321 - 44336284
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  44336321 cggcagttaactaccgaggttttcctcggcagttaact 44336284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 46217319 - 46217356
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  46217319 cggcagttaactaccgaagttttcctcggtagttaact 46217356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 52802202 - 52802165
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  52802202 cggcagttaactaccgaggttttcctcggcagttaact 52802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 5844670 - 5844638
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||| ||||||||||||||||||||||    
T  5844670 ggtattttcgacttttacatgtgtttctcagcc 5844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 26879297 - 26879333
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  26879297 ggcagttaactaccgaggttttcctcggcagttaact 26879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31320230 - 31320110
Alignment:
Q  1 ctcttttactcttctttgcagtttcatgtggtgaaactagatagttagatgcatctggaaaatgagagttgttatgagcttcagagtcagtttcagggcc 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||  |||||||||||||| |    
T  31320230 ctcttttactcttcttcacagtttcatgtggtgaaactagatgtttagatgcatctggggaatgagagttgttatgagcttcgaagtcagtttcagggtc 31320131  T
Q  101 caatgtgctatcagtagcatc 121  Q
    |||| ||||||||||||||||    
T  31320130 caatatgctatcagtagcatc 31320110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 40055433 - 40055338
Alignment:
Q  168 aggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcct 262  Q
    |||||||||||||||||||||| ||| | ||||| ||||||||||  | |||||| || |  |||| ||||||||||||||||||||| |||||||    
T  40055433 aggttttcctcggtagttaactgcagccggttttagttttcctcgatagttaactgtcgaggggtaatttcgtcttttacatgtgtttatcagcct 40055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 37893423 - 37893481
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||| ||||||| | | |||||||||| |||||||||||||||||| ||||    
T  37893423 ttttcctcggcagttaactaccgagtggtattttcatcttttacatgtgtttcttagcc 37893481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 41183225 - 41183262
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  41183225 cggcagttaactaccgaggttttcctcggtagttaact 41183262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 5351724 - 5351772
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||||    
T  5351724 aaatttcctcggcagttaactaccgaggttttcctcggcagttaactac 5351772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 19848140 - 19848228
Alignment:
Q  171 ttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 258  Q
    |||| |||||||||||||| ||  | ||||| |||| |||||||| ||||||||| ||   |||||| |||||||||||||||||||||    
T  19848140 tttttctcggtagttaactgcaaccggttttatttttcctcggcagttaactatcgaagaatatttttgtcttttacatgtgtttctca 19848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 25515813 - 25515920
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttg--ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtt 253  Q
    ||||||||| ||| || ||||||||||||||||| ||||| ||| ||  ||||||| | |||||||||| | |  |||||| |||||||||||   ||||    
T  25515813 agttaactaccgaagtcttcctcggtagttaactgcagtcggttctgttttttccttgtcacttaactaccgaggggtattgtcgtcttttactcatgtt 25515912  T
Q  254 tctcagcc 261  Q
    ||||||||    
T  25515913 tctcagcc 25515920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 2983474 - 2983435
Alignment:
Q  150 cgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  2983474 cgcggcagttaactgccgaggttttcctcggtagttaact 2983435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 37893206 - 37893148
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||| ||||||| | |  |||||||||||| ||||||||||||||| ||||    
T  37893206 ttttcctcggcagttaactaccgaggggtattttcgtcatttacatgtgtttcttagcc 37893148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 435414 - 435381
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagtt 185  Q
    ||||||| ||||||||||||||||||||||||||    
T  435414 cggcagtcaactatcgaggttttcctcggtagtt 435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 261
Target Start/End: Original strand, 7780416 - 7780445
Alignment:
Q  232 attttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||||||||||||||||||||||||    
T  7780416 attttcgtcttttacatgtgtttctcagcc 7780445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 12908430 - 12908467
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  12908430 cggcagttaactatcaaggttttcctcggcagttaact 12908467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 17424204 - 17424167
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  17424204 cggcagttaactaccgaggttttcctcggcagttaact 17424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 22003402 - 22003439
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22003402 cggcagttaactaccgaggttttcctcggcagttaact 22003439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 23347329 - 23347366
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  23347329 cggcagttagctaccgaggttttcctcggtagttaact 23347366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 24601711 - 24601662
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 201  Q
    ||||||||||||| ||| | |||||||||||||||||| ||| |||||||    
T  24601711 cggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24601662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 24612403 - 24612452
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 201  Q
    ||||||||||||| ||| | |||||||||||||||||| ||| |||||||    
T  24612403 cggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24612452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 25184831 - 25184868
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  25184831 cggcagttaactaccgaggttttcctcggcagttaact 25184868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 26543990 - 26544027
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  26543990 cggcagttaactaccgaggttttcctcagtagttaact 26544027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 28468713 - 28468676
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28468713 cggcagttaactaccgaggttttcctcggcagttaact 28468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 40221131 - 40221168
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  40221131 cggcagttaactgccgaggttttcctcggtagttaact 40221168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 41565390 - 41565353
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  41565390 cggcagttaactgccgaggttttcctcggtagttaact 41565353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 43536174 - 43536137
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43536174 cggcagttaactaccgaggttttcctcggcagttaact 43536137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 43982271 - 43982234
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43982271 cggcagttaactaccgaggttttcctcggcagttaact 43982234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 17911243 - 17911135
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaactacagtcagttttgtt-ttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgt 252  Q
    ||||||||||   |||||||||||||||| |||||| ||| | ||||||   |||||||||| |||||| || || |  ||||| || ||||||||||||    
T  17911243 gcagttaactgctgaggttttcctcggtaattaactgcagccggttttggacttcctcggcagttaactgtcgaaggacattttagtattttacatgtgt 17911144  T
Q  253 ttctcagcc 261  Q
    || ||||||    
T  17911143 ttttcagcc 17911135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 28477069 - 28477105
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaact 28477105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 40039685 - 40039796
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtc-agttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||| |  ||||||| || ||||||||| || |||||||| |||||||||||||    
T  40039685 cggcagttaactatcgaggttttcctcggtagttaactgcagtcgattttggacttcctcgacagttaactatcgaagggtatttttgtcttttacatgt 40039784  T
Q  251 gtttctcagcct 262  Q
    |||| |||||||    
T  40039785 gtttatcagcct 40039796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 40039198 - 40039087
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag-tcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | | ||| |  |||||||| | ||||||||  |  ||||||||||||||||||||||    
T  40039198 cggcagttaacttccgaggttttcctcggtagttaactgcagctgattttggacttcctcggtaattaactattgaggggtattttcgtcttttacatgt 40039099  T
Q  251 gtttctcagcct 262  Q
    |||| |||||||    
T  40039098 gtttttcagcct 40039087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 5680469 - 5680527
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||    
T  5680469 ttttcctcgacacttaactatcgaagggtatttttgtcttttacatgtgtttctcagcc 5680527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 26451552 - 26451511
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  26451552 cggcagttaactaccgaggttttcctcggcagttaactacag 26451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 32383206 - 32383243
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32383206 cggcagttaactaccgaggttttcctcggtagttaact 32383243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 32437161 - 32437198
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32437161 cggcagttaactaccgaggttttcctcggtagttaact 32437198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 33482770 - 33482725
Alignment:
Q  216 ttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||| | || |||||||||||||||||||||||||||||||||    
T  33482770 ttaactaccgaaaggtattttcgtcttttacatgtgtttctcagcc 33482725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 27411665 - 27411633
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||||||||||||||||||||||||    
T  27411665 ggtattttcgtcttttacatgtgtttctcagcc 27411633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 40077251 - 40077294
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtc 195  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  40077251 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 40077294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 8419485 - 8419439
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  8419485 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 8419439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 21406339 - 21406269
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 221  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| | |||| ||  |||||||||| ||||||    
T  21406339 cggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 21800831 - 21800761
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 221  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| | |||| ||  |||||||||| ||||||    
T  21800831 cggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21800761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 32375732 - 32375686
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  32375732 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 32375686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 41016486 - 41016444
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagt 194  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||    
T  41016486 cggcagttaactaccgaggttttcctcggcagttaactgcagt 41016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 184553 - 184590
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  184553 cggcagttaactaccgaggttttcctcggcagttaact 184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 22550866 - 22550903
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22550866 cggcagttaactaccgaggttttcctcggcagttaact 22550903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 26663034 - 26663071
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26663034 cggcagttaactaccgaggttttcctcggcagttaact 26663071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 34366983 - 34366946
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34366983 cggcagttaactaccgaggttttcctcggaagttaact 34366946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 42602532 - 42602495
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  42602532 cggcagttaactaccgaggttttcctcggcagttaact 42602495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 21175773 - 21175745
Alignment:
Q  231 tattttcgtcttttacatgtgtttctcag 259  Q
    |||||||||||||||||||||||||||||    
T  21175773 tattttcgtcttttacatgtgtttctcag 21175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 36677931 - 36677967
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  36677931 ggcagttaactaccgaggttttcctcggcagttaact 36677967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 38134437 - 38134405
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagt 184  Q
    ||||||||||||||||| |||||||||||||||    
T  38134437 cggcagttaactatcgaagttttcctcggtagt 38134405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 20353931 - 20354040
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 251  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||   ||||||||||||| |||||||||||   || | |||||||||||||||||||||    
T  20353931 cggcagttaactactgaggttttcctcgatagttaactgcagttgattttgttttcctcagcacttaactacggaaggatattttcgtcttttacatgtg 20354030  T
Q  252 tttctcagcc 261  Q
    ||||||||||    
T  20354031 tttctcagcc 20354040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 30791000 - 30791046
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  30791000 aaatttcctcggcagttaactaccgaggttttcctcggtagttaact 30791046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 17838722 - 17838689
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagtt 185  Q
    ||||||||||||||||||||||||||||||||||    
T  17838722 cggcagttaactatcgaggttttcctcggtagtt 17838689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 20353395 - 20353330
Alignment:
Q  197 gttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcct 262  Q
    |||||||||| |||||||||||| ||   ||  |||||||||||||||||| ||||||||||||||    
T  20353395 gttttgtttttctcggcacttaattactgaagagtattttcgtcttttacaagtgtttctcagcct 20353330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 47060998 - 47060957
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  47060998 cggcagttaactaccgaggttttcctcggcagttaactacag 47060957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 31324811 - 31324855
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttt 200  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||    
T  31324811 agttaactgccgaggttttcctcggtagttaactacagtcggttt 31324855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 17840891 - 17840934
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtc 195  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  17840891 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 17840934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 36805595 - 36805500
Alignment:
Q  166 cgaggttttcctcggtagttaactacagtcagttttgttttc-ctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagc 260  Q
    |||| ||||||||||||| ||||| ||  | ||||| ||||  |||| || |||||||||||  | |||||||||||||||||| |||||||||||    
T  36805595 cgagattttcctcggtagctaactgcaagcggttttattttttctcgacagttaactatcaagggatattttcgtcttttacatatgtttctcagc 36805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 42499481 - 42499438
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtc 195  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  42499481 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 42499438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 45767853 - 45767899
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  45767853 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 45767899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 8522140 - 8522185
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaactacagtcagttt 200  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||    
T  8522140 cagttaactgccgaggttttcctcgggagttaactacagccagttt 8522185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 9367725 - 9367762
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  9367725 cggcagttaactaccgaggttttcctcggcagttaact 9367762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 15070427 - 15070390
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15070427 cggcagttaactaccgaggttttcctcggcagttaact 15070390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 18105445 - 18105408
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  18105445 cggcagttaactaccgaggttttcctcggcagttaact 18105408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 30355240 - 30355277
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  30355240 cggcagttaactaccgaggttttcctcggcagttaact 30355277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 35606861 - 35606824
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  35606861 cggcagttaactaccgaggttttcctcggcagttaact 35606824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 7953836 - 7953868
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||||||||||||||||| ||||||    
T  7953836 ggtattttcgtcttttacatgtgtttatcagcc 7953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 36781450 - 36781498
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt 200  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| ||||    
T  36781450 cggcagttaactgccgaggttttcctcgggagttaactgcagtctgttt 36781498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 41047849 - 41047809
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactaca 192  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  41047849 cggcagttaactaccgaagttttcctcggcagttaactaca 41047809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 27532618 - 27532725
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||| || |  |||||||| || ||||||||||    
T  27532618 cggcagttaactgccgaggttttcctcgatagttaactgcagtcagttttatttttcctcggcagttaactgtcgaggggtattttggtattttacatgt 27532717  T
Q  251 gtttctca 258  Q
    ||||||||    
T  27532718 gtttctca 27532725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31610013 - 31609957
Alignment:
Q  1 ctcttttactcttctttgcagtttcatgtggtgaaactagatagttagatgcatctg 57  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  31610013 ctcttttactcttcttcatagtttcatgtggtgaaactagatagttagatgcatctg 31609957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 31609936 - 31609846
Alignment:
Q  47 agatgcatctggaaaatgagagttgttatgagcttcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtccatctcatctccccaaaat 146  Q
    |||||||||||||||||||||||||||||||||||||  |||            |||||||||||||||||||||||||| |||||||||| | ||||||    
T  31609936 agatgcatctggaaaatgagagttgttatgagcttcaaggtc------------caatgtgctatcagtagcatcagtgttcatctcatcttctcaaaat 31609849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 30966144 - 30966053
Alignment:
Q  170 gttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatc-aaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||||| |||||||||||| | ||| | |||||||||||| ||||||| | ||| |||||||| ||||||||| ||||||||||||||    
T  30966144 gttttcctcgggagttaactacagccggttatattttcctcggcagttaactaccgaaagggtattttggtcttttac-tgtgtttctcagcc 30966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 18307326 - 18307285
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  18307326 cggcagttaactaccgaggttttcctcggcagttaactacag 18307285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 38968167 - 38968130
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  38968167 cggcagttaactatcgaggttttcctcggcagttaact 38968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 35926433 - 35926397
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35926433 ggcagttaactaccgaggttttcctcggtagttaact 35926397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 3603149 - 3603196
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtt 199  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| |||||    
T  3603149 cggcagttaactaccgaggttttcctcggaagttaactgcagccagtt 3603196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 25890066 - 25890023
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtc 195  Q
    |||||||| |||| |||||||||||||||||||||||| |||||    
T  25890066 cggcagtttactaccgaggttttcctcggtagttaactgcagtc 25890023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 42099087 - 42099137
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt 206  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  42099087 agttaactgccgaggttttcctcgatagttaactacagccagttttatttt 42099137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 1035256 - 1035219
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  1035256 cggcagttaactatcgaggatttcctcggtaattaact 1035219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 7757397 - 7757360
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  7757397 cggcagttaactagcgaggttttcctcggcagttaact 7757360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 13837796 - 13837759
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13837796 cggcagttaactaccgaggttttcctcggcagttaact 13837759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 13838425 - 13838462
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13838425 cggcagttaactgccgaggttttcctcggtagttaact 13838462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 17966889 - 17966930
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaactacagtc 195  Q
    ||||||||||| |||| ||||||||||||||||||| |||||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtc 17966930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 19037471 - 19037508
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19037471 cggcagttaactaccgaggttttcctcggcagttaact 19037508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 28238211 - 28238174
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28238211 cggcagttaactaccgaggttttcctcggcagttaact 28238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 28388520 - 28388557
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28388520 cggcagttaactaccgaggttttcctcggcagttaact 28388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 30708874 - 30708911
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  30708874 cggcagttaactatcgaggttttcttcggcagttaact 30708911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 27660012 - 27659976
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaac 188  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  27660012 cggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 30705167 - 30705207
Alignment:
Q  151 gcggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    |||||||||||||| ||||| ||||||||| ||||||||||    
T  30705167 gcggcagttaactaccgaggatttcctcggcagttaactac 30705207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 38855713 - 38855749
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  38855713 ggcagttaactaccgaggttttcctcggcagttaact 38855749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 42098361 - 42098305
Alignment:
Q  166 cgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaact 221  Q
    ||||||||||||||| |||||||| ||| |||||||  |||||||||||| ||||||    
T  42098361 cgaggttttcctcggcagttaactgcagccagttttatttttcctcggcagttaact 42098305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 26791721 - 26791609
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg--ttttcctcggcacttaactatcaaatggtattttcgtcttttacatg 249  Q
    ||||||||||||  ||||||||| |||||||||||||| ||| | ||||    ||||| |||||| ||||||| | || |||||||||||||||||||||    
T  26791721 cggcagttaactgccgaggtttttctcggtagttaactgcagccggtttccctttttcttcggcagttaactaccgaagggtattttcgtcttttacatg 26791622  T
Q  250 tgtttctcagcct 262  Q
    |||||||||||||    
T  26791621 tgtttctcagcct 26791609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 40335155 - 40335247
Alignment:
Q  170 gttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||||| |||||||||||| | ||||| |||| |||| ||| ||||||||  || |||||||||||||||||||||||||||||||||    
T  40335155 gttttcctcggcagttaactacagccggttttatttttcctcagcagttaactattgaagggtattttcgtcttttacatgtgtttctcagcc 40335247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 41933623 - 41933733
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||| ||||||||| |||||||||||||| ||| | ||||  |||| |||||||||||||||||| |  |||||| |||| ||||||  ||    
T  41933623 cggcagttaactaccgaggtttttctcggtagttaactgcagccggtttcatttttcctcggcacttaactatcgaggggtattgtcgttttttactcgt 41933722  T
Q  251 gtttctcagcc 261  Q
    |||||||||||    
T  41933723 gtttctcagcc 41933733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 48578172 - 48578264
Alignment:
Q  167 gaggttttcctcggtagttaactacagtcagttttgttttc-ctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 258  Q
    ||||||||| ||||||||||||| ||| | ||||| ||||  ||||||||||||||| | |  ||||||||||||||||||||||||||||||    
T  48578172 gaggttttcttcggtagttaactgcagccggttttattttttctcggcacttaactaccgagaggtattttcgtcttttacatgtgtttctca 48578264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 35076018 - 35075927
Alignment:
Q  171 ttttcctcggtagttaactacagtcagttttgttttcct-cggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||||||||||||| |||   ||||| |||| || || |||||||||||| |  |||||||||||||||||||||||||||||||||    
T  35076018 ttttcctcggtagttaactgcagctggttttatttttcttcgacacttaactatcgaggggtattttcgtcttttacatgtgtttctcagcc 35075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 14297202 - 14297106
Alignment:
Q  167 gaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 263  Q
    ||||||||||||||||||||||| ||| ||||||  |||| ||||||||||||||| | |   | |||| |||||||||| ||||||||| ||||||    
T  14297202 gaggttttcctcggtagttaactgcagccagtttcatttttctcggcacttaactaccgaggagcatttacgtcttttacttgtgtttctaagccta 14297106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 14315451 - 14315355
Alignment:
Q  167 gaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 263  Q
    ||||||||||||||||||||||| ||| ||||||  |||| ||||||||||||||| | |   | |||| |||||||||| ||||||||| ||||||    
T  14315451 gaggttttcctcggtagttaactgcagccagtttcatttttctcggcacttaactaccgaggagcatttacgtcttttacttgtgtttctaagccta 14315355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 11084008 - 11084111
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagt-cagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||  ||||||||||||||| |||||||| | ||  | |||  |||||||||||||||| ||| | |  ||||||||||||||||| ||||    
T  11084008 cggcagttaactgccgaggttttcctcgggagttaactgccgtggattttatttttcctcggcacttacctaccgaggggtattttcgtcttttaaatgt 11084107  T
Q  251 gttt 254  Q
    ||||    
T  11084108 gttt 11084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 72529 - 72618
Alignment:
Q  175 cctcggtagttaactacagtcagttttgt-tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 263  Q
    ||||||||||||||| ||| | ||||  | ||||||||||| ||||||| | ||||||||||| || ||||||  |||||||||||||||    
T  72529 cctcggtagttaactgcagacggtttcatatttcctcggcagttaactaccgaatggtattttggtattttactcgtgtttctcagccta 72618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 16984162 - 16984199
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  16984162 cggcagttaactatcgaggttttcctcggcagttaact 16984199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 31242830 - 31242863
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctcagcct 262  Q
    ||||||||||||||||||||||||||||||||||    
T  31242830 ggtattttcgtcttttacatgtgtttctcagcct 31242863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 9013909 - 9013874
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9013909 gcagttaactatcgaggttttcctcggcagttaact 9013874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 11494615 - 11494556
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcg 211  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| | ||||||  |||||||    
T  11494615 cggcagttaactaccgaggttttcctcggcagttaactgcagccggttttgaattcctcg 11494556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 26932656 - 26932617
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  26932656 cggcagttaactaccgaggttttcctcggcagttaactac 26932617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 36003666 - 36003608
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||| |||| |||||||||||| |   ||||||||||||||||||||||||| ||||||    
T  36003666 tttttctcgacacttaactatcgaggagtattttcgtcttttacatgtgtttttcagcc 36003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 49422171 - 49422205
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaac 188  Q
    |||||||||| ||||||||||||||||||||||||    
T  49422171 gcagttaactgtcgaggttttcctcggtagttaac 49422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 958595 - 958632
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  958595 cggcagttaactaccgaggttttcctcggcagttaact 958632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 6178111 - 6178148
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  6178111 cggcagttaactaccgaggttttcctcggcagttaact 6178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 9890066 - 9890029
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  9890066 cggcagttaactaccgaggttttcctcggcagttaact 9890029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 15995794 - 15995757
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15995794 cggcagttaactaccgaggttttcctcggcagttaact 15995757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 19069259 - 19069222
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19069259 cggcagttaactaccgaggttttcctcggcagttaact 19069222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 21022889 - 21022926
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  21022889 cggcagttaactaccgaggttttcctcggcagttaact 21022926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 21470975 - 21470926
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 201  Q
    ||||||||||||| ||||||||||||| |  ||||||| |||||||||||    
T  21470975 cggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttt 21470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 30726742 - 30726779
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  30726742 cggcagttaactaccgaggttttcctcggcagttaact 30726779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 31425319 - 31425356
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  31425319 cggcagttaactaccgaggttttcctcggcagttaact 31425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 33383877 - 33383828
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 201  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| |||||    
T  33383877 cggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttt 33383828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 37022062 - 37022099
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  37022062 cggcagttaactgccgaggttttcctcggtagttaact 37022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 37563281 - 37563318
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  37563281 cggcagttaactaccgaggttttcctcggcagttaact 37563318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 39590569 - 39590606
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  39590569 cggcagttaactaccgaggttttcctcggcagttaact 39590606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 39773476 - 39773439
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  39773476 cggcagttaactaccgaggttttcctcggcagttaact 39773439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 40358281 - 40358318
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  40358281 cggcagttaactaccgaggttttcctcggcagttaact 40358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 41795357 - 41795394
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41795357 cggcagttaactaacgaggttttcctcggcagttaact 41795394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 44561331 - 44561368
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  44561331 cggcagttaactaccgagattttcctcggtagttaact 44561368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 49094156 - 49094119
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  49094156 cggcagttaactaccgaggttttcctcggcagttaact 49094119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 54634016 - 54634053
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  54634016 cggcagttaactaccgaggttttcctcggcagttaact 54634053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 30836716 - 30836652
Alignment:
Q  198 ttttgttttcctcggcacttaactatc-aaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||| ||||| |||||| |||||| || |||||  ||||||||||||||||||||||| ||||||    
T  30836716 tttttttttcgtcggcagttaactgtcgaaatgacattttcgtcttttacatgtgtttttcagcc 30836652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 31242786 - 31242818
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagt 184  Q
    ||||||||||||| |||||||||||||||||||    
T  31242786 cggcagttaactaccgaggttttcctcggtagt 31242818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 31496302 - 31496196
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||  |||||||||||||||||| ||||| ||| | ||||| |||| ||||| || ||||||| | || |||||||| |||||||||||||||||    
T  31496302 agttaactgccgaggttttcctcggtagataactgcagccggttttatttttcctcgacagttaactaccgaagggtatttttgtcttttacatgtgttt 31496203  T
Q  255 ctcagcc 261  Q
    |||||||    
T  31496202 ctcagcc 31496196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 31501688 - 31501582
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttg-ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||  |||||||||||||||||| ||||| ||| | |||||  ||||||||| || ||||||| | || |||||||| |||||||||||||||||    
T  31501688 agttaactgccgaggttttcctcggtagataactgcagccggttttaattttcctcgacagttaactaccgaagggtatttttgtcttttacatgtgttt 31501589  T
Q  255 ctcagcc 261  Q
    |||||||    
T  31501588 ctcagcc 31501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 32555593 - 32555693
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttc 255  Q
    ||||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||  |||||||||| | |    ||||||| ||||||||| |||||||    
T  32555593 agttaactaccgaggttttccttagtaattaactacagtcggttttgttttcctcaacacttaactaccgaggaatattttcttcttttacaagtgtttc 32555692  T
Q  256 t 256  Q
    |    
T  32555693 t 32555693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 3380838 - 3380775
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcactta 218  Q
    |||||||| ||||||||||||||||||||||||| | |||| ||||  ||||||||||||||||    
T  3380838 agttaactgtcgaggttttcctcggtagttaactgccgtcaattttatttttcctcggcactta 3380775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 32555118 - 32555064
Alignment:
Q  204 tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 258  Q
    |||| |||||| ||||||| | |||| ||||||||||||||||||||||||||||    
T  32555118 tttcatcggcagttaactaccgaatgatattttcgtcttttacatgtgtttctca 32555064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 33052605 - 33052499
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||||| || ||||||  | |     |||||||| ||||||||||||||    
T  33052605 cagttaactgtcgagatttttctcggtagttaactgcagacggttttattttcctcgacagttaactgccgagaaacattttcgttttttacatgtgttt 33052506  T
Q  255 ctcagcc 261  Q
    |||||||    
T  33052505 ctcagcc 33052499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 28362734 - 28362769
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaact 28362769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 31480430 - 31480328
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||  |||||||||||| ||||| ||||| |||   ||||| |||| ||||| || ||||||| | || |||||||| | |||||||||||||||    
T  31480430 agttaactcccgaggttttcctgggtagataactgcagctggttttatttttcctcgacagttaactaccgaagggtatttttgacttttacatgtgttt 31480331  T
Q  255 ctc 257  Q
    |||    
T  31480330 ctc 31480328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 31516943 - 31517001
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||| ||||||| | |  ||||||||| |||||||||||||||||| ||||    
T  31516943 ttttcctcggcagttaactaccgaggggtattttcatcttttacatgtgtttcttagcc 31517001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 6204899 - 6204862
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  6204899 cggcagttaactaccgaggttttcctcggcagttaact 6204862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 9048147 - 9048110
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  9048147 cggcagttaactaccgaagttttcctcggtagttaact 9048110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 9049085 - 9049122
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  9049085 cggcagttaactaccgaagttttcctcggtagttaact 9049122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 11691866 - 11691829
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  11691866 cggcagttaactaccgaggttttcctcggcagttaact 11691829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 13382701 - 13382664
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13382701 cggcagttaactaccgaggttttcctcggcagttaact 13382664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 18351644 - 18351681
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  18351644 cggcagttaactaccgaggttttcctcggcagttaact 18351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 22305180 - 22305143
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22305180 cggcagttaactaccgaggttttcctcggcagttaact 22305143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 26712120 - 26712083
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26712120 cggcagttaactaccgaggttttcctcggcagttaact 26712083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 28249957 - 28249920
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28249957 cggcagttaactaccgaggttttcctcggcagttaact 28249920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 45507402 - 45507508
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    ||||||||  |||||||||||||||||||||||| ||| |  |||| |||| |||||||| ||||||||| |  | ||||||||||||||| ||||||||    
T  45507402 agttaactgccgaggttttcctcggtagttaactgcagccgattttatttttcctcggcagttaactatcgagggatattttcgtcttttatatgtgttt 45507501  T
Q  255 ctcagcc 261  Q
    |||||||    
T  45507502 ctcagcc 45507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 45506663 - 45506605
Alignment:
Q  203 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||    
T  45506663 ttttcctcggcagttaactatcaagaggtatttttgtcttttacatgtgtttctcagcc 45506605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 2830990 - 2831100
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    |||||||||||| |||||||||| ||| ||||||||||  |||| |||||  ||||| |||||| |||| |||  |  | |||||||||||||||||| |    
T  2830990 cggcagttaactgtcgaggtttttctcagtagttaactgtagtcggttttatttttcatcggcagttaattattgagggatattttcgtcttttacatat 2831089  T
Q  251 gtttctcagcc 261  Q
    |||||||||||    
T  2831090 gtttctcagcc 2831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 31890243 - 31890345
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 251  Q
    ||||||||||||  ||| ||||||||| |||  ||||| ||| | ||| | ||||| |||||| ||||||| ||| || ||||||||||||||| |||||    
T  31890243 cggcagttaactgccgaagttttcctctgtaactaactgcagccggttcttttttcatcggcagttaactaccaagtgatattttcgtcttttatatgtg 31890342  T
Q  252 ttt 254  Q
    |||    
T  31890343 ttt 31890345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 42760209 - 42760251
Alignment:
Q  151 gcggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  42760209 gcggcagttaactaccgaggttttcctcggcagttaactacag 42760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 30256006 - 30256075
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaactacagtcagttttgt-tttcctcggcacttaacta 222  Q
    ||||||||||||||||||||||||||| |||||||| ||| | ||||| |  |||||||||| |||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaacta 30256075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 52570567 - 52570616
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 201  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| |||||    
T  52570567 cggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttt 52570616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 51326048 - 51325944
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 254  Q
    |||||||| |||||||||| || ||||||||||| ||| | |||||  ||||||||| || ||||||||  |  | ||||||| |||||||||||| |||    
T  51326048 agttaactgtcgaggtttttcttggtagttaactgcagccggttttatttttcctcgacagttaactattgagggatattttcatcttttacatgtcttt 51325949  T
Q  255 ctcag 259  Q
    |||||    
T  51325948 ctcag 51325944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 29929498 - 29929463
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaa 187  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29929498 cggcagttaactatcgaggttttcctcggcagttaa 29929463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 29978652 - 29978617
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaa 187  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29978652 cggcagttaactatcgaggttttcctcggcagttaa 29978617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 48566414 - 48566375
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  48566414 cggcagttaactaccgaagttttcctcggtagttaactac 48566375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 16861190 - 16861224
Alignment:
Q  156 agttaactatcgaggttttcctcggtagttaacta 190  Q
    ||||||||||||||| |||||||||||||||||||    
T  16861190 agttaactatcgaggatttcctcggtagttaacta 16861224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 30943270 - 30943224
Alignment:
Q  143 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  30943270 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 30943224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 38992407 - 38992365
Alignment:
Q  86 gtcagtttcagggcccaatgtgctatcagtagcatcagtgtcc 128  Q
    |||||| |||||  |||||||||||||||||||||||||||||    
T  38992407 gtcagtatcaggttccaatgtgctatcagtagcatcagtgtcc 38992365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 49196453 - 49196487
Alignment:
Q  155 cagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| |||||||||||||||||||||    
T  49196453 cagttaactatcgcggttttcctcggtagttaact 49196487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 50604421 - 50604531
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag-tcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 250  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | | ||| |  |||||| ||| ||||||    || |||||||| || ||||||||||    
T  50604421 cggcagttaactgccgaggttttcctcggtagttaactgcagctgattttggacttcctcagcaattaactgctgaagggtattttagtattttacatgt 50604520  T
Q  251 gtttctcagcc 261  Q
    |||| ||||||    
T  50604521 gtttttcagcc 50604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 2647700 - 2647737
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  2647700 cggcagttaactaccgaggttttcctcggcagttaact 2647737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 9429850 - 9429887
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  9429850 cggcagttaactaccgaggttttcctcggtacttaact 9429887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 19341116 - 19341079
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  19341116 cggcagttaactgtcgaagttttcctcggtagttaact 19341079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 19440328 - 19440291
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19440328 cggcagttaactaccgaggttttcctcggcagttaact 19440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 20918012 - 20918049
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  20918012 cggcagttaactaccgaggttttcctcggcagttaact 20918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 20926974 - 20927011
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  20926974 cggcagttaactaccgaggttttcctcggcagttaact 20927011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 29918342 - 29918379
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  29918342 cggcagttaactaacgaggttttcctcggcagttaact 29918379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 29967495 - 29967532
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  29967495 cggcagttaactaacgaggttttcctcggcagttaact 29967532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 32593113 - 32593150
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  32593113 cggcagttaactatcgaagttttcctcggaagttaact 32593150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 34049152 - 34049115
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34049152 cggcagttaactaccgaggttttcctcggcagttaact 34049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 35743583 - 35743620
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  35743583 cggcagttaactaccgaggttttcctcggcagttaact 35743620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 36812909 - 36812872
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  36812909 cggcagtttactaccgaggttttcctcggtagttaact 36812872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 41579725 - 41579762
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41579725 cggcagttaactaccgaggttttcctcggcagttaact 41579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 41803070 - 41803033
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41803070 cggcagttaactaccgaggttttcctcggcagttaact 41803033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 41844365 - 41844402
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41844365 cggcagttaactaccgaggttttcctcggcagttaact 41844402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 42756231 - 42756194
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  42756231 cggcagttaactctcgaggttttcctcggcagttaact 42756194  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 43476264 - 43476227
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43476264 cggcagttaactaccgaggttttcctcggcagttaact 43476227  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 44227184 - 44227147
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  44227184 cggcagttaactaccgaggttttcctcggcagttaact 44227147  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 46697783 - 46697746
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  46697783 cggcagttaactaccgaggttttcctcggcagttaact 46697746  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 48566438 - 48566401
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaactac 191  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  48566438 gcagttaactaccgaggttttcctcggcagttaactac 48566401  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 50477252 - 50477215
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  50477252 cggcagttaactaccgaggttttcctcggcagttaact 50477215  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 261
Target Start/End: Original strand, 51326726 - 51326755
Alignment:
Q  232 attttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||||||||||||||||||||||||||    
T  51326726 attttcgtcttttacatgtgtttctcagcc 51326755  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 54389867 - 54389830
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  54389867 cggcagttaactaccgaggttttcctcggcagttaact 54389830  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 1294078 - 1294126
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt 200  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| ||||    
T  1294078 cggcagttaactgccgaggttttcctcggaagttaactgcagtcggttt 1294126  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 3501897 - 3501933
Alignment:
Q  153 ggcagttaactatcgaggttttcctcggtagttaact 189  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaact 3501933  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 16861162 - 16861198
Alignment:
Q  154 gcagttaactatcgaggttttcctcggtagttaacta 190  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  16861162 gcagttaactaccgaggatttcctcggtagttaacta 16861198  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 40872068 - 40872040
Alignment:
Q  229 ggtattttcgtcttttacatgtgtttctc 257  Q
    |||||||||||||||||||||||||||||    
T  40872068 ggtattttcgtcttttacatgtgtttctc 40872040  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 51402399 - 51402439
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactaca 192  Q
    ||||||||||||| ||||||||||||||  |||||||||||    
T  51402399 cggcagttaactaccgaggttttcctcgacagttaactaca 51402439  T

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Target: scaffold0794 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 5343 - 5306
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5343 cggcagttaactaccgaggttttcctcggtagttaact 5306  T

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Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 903 - 862
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacag 193  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  903 cggcagttaactaccgaggttttcctcggcagttaactacag 862  T

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Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 929 - 890
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactac 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  929 cggcagttaactaccgaggttttcctcggcagttaactac 890  T

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Target: scaffold0494; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 5403 - 5366
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  5403 cggcagttaactaccgaggttttcctcggcagttaact 5366  T

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Target: scaffold0143 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 3906 - 3951
Alignment:
Q  216 ttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 261  Q
    ||||||| | || |||||||||||||||||||||||||||||||||    
T  3906 ttaactaccgaaaggtattttcgtcttttacatgtgtttctcagcc 3951  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 67696 - 67649
Alignment:
Q  81 tcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtcc 128  Q
    |||||||| ||||||||  ||| |||||||||||||||||||||||||    
T  67696 tcagagtcggtttcaggatccactgtgctatcagtagcatcagtgtcc 67649  T

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Target: scaffold0341 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 18058 - 18108
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg 202  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| | ||||||    
T  18058 cggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttg 18108  T

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Target: scaffold0744 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 424 - 461
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  424 cggcagttaactaccgaggttttcctcggcagttaact 461  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 7490 - 7453
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  7490 cggcagttaactaccgaggttttcctcggtagtcaact 7453  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 50119 - 50082
Alignment:
Q  152 cggcagttaactatcgaggttttcctcggtagttaact 189  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  50119 cggcagttaactaccgaggttttcctcggcagttaact 50082  T

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