View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21289_low_4 (Length: 403)
Name: NF21289_low_4
Description: NF21289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21289_low_4 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 371; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 14 - 392
Target Start/End: Complemental strand, 37165083 - 37164705
Alignment:
| Q |
14 |
tcatcacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaattt |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37165083 |
tcataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaattt |
37164984 |
T |
|
| Q |
114 |
gagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164983 |
gagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgt |
37164884 |
T |
|
| Q |
214 |
caaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164883 |
caaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
37164784 |
T |
|
| Q |
314 |
ctcaaaatgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
392 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164783 |
ctcaaaatgagcttattattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
37164705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 26 - 392
Target Start/End: Original strand, 35142799 - 35143165
Alignment:
| Q |
26 |
gcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagttagagaat |
125 |
Q |
| |
|
|||||||||||||| ||||| || | |||||||||| |||| || |||||||||| ||||| ||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
35142799 |
gcatcgaaactctgcaactgcgtactaattggaatttttccagataggttgttatcggacacattcaacatggaaaggcgataaatttgagctagagaag |
35142898 |
T |
|
| Q |
126 |
gaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgct |
225 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
35142899 |
gaggaattaaaccagagaaattgtttcttgacaagtcaagaaattcaagtgatgttaaccttccaatctctgaagtaatttccccagtcaaattgttgct |
35142998 |
T |
|
| Q |
226 |
tgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaaaatgagc |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
35142999 |
tgataaattcaatgacaccaatgctatcaagtttcctatttcttccggaatgtctcctgtcaatagattgcttgatagatcaatactcctcaaaatgagt |
35143098 |
T |
|
| Q |
326 |
ttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
392 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||| | ||||||| ||||| || ||||||| |
|
|
| T |
35143099 |
ttattattcttgaatagtcgtgctgcacctttccacattaataatgcaaccaaatcatagccttcat |
35143165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 37139710 - 37139337
Alignment:
| Q |
19 |
acttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagtt |
118 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||||| || ||||| |||| ||| |||||||||||||||| | |
|
|
| T |
37139710 |
acttgaagcatcgaaactctgtaactgcgtgccaattggaattcttccagagagattgttatcagatagattcaacacggacaggcgatcaatttgagct |
37139611 |
T |
|
| Q |
119 |
agagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaat |
218 |
Q |
| |
|
|||| | |||||||| ||||| ||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| |||||| |||||||| | |
|
|
| T |
37139610 |
agagtaggaggaattggaccagagaaatggtttcttgacaagtcaagagaatcaagtgatattaaccttccaatcttcgaaggaatttctcctgtcaact |
37139511 |
T |
|
| Q |
219 |
tgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaa |
318 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| || ||||| |
|
|
| T |
37139510 |
tgttgcatgataaattcaatgacaccaactctatcaagttttctatttcttctggaatgtctcctatcaattgattgcttgatagatcaatactcctcaa |
37139411 |
T |
|
| Q |
319 |
aatgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
392 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
37139410 |
aatgagcttattattcttgaatagccgttctgtccctttccacatcaacaatgcaatcaaatcgtagccttcat |
37139337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 392
Target Start/End: Complemental strand, 38749292 - 38748921
Alignment:
| Q |
21 |
ttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagttag |
120 |
Q |
| |
|
||||||||| ||||||||| ||||| || ||||||||||||||||| ||| | || |||| ||||||| |||| ||| || | |||||||| || ||| |
|
|
| T |
38749292 |
ttgaggcattgaaactctgcaactgcgtgccaattggaattcttccagaccgattattatccaacagattcaacaaggacagacaatcaattttagctag |
38749193 |
T |
|
| Q |
121 |
agaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattg |
220 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||| |
|
|
| T |
38749192 |
agaaggaggaatcaaaccagagaaatggtttcgtgacaagtcaagaaattcaagtgatgttaaccttccaatctttgaagtaatttctccattcaaattg |
38749093 |
T |
|
| Q |
221 |
ttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaaaa |
320 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
38749092 |
ttgtttgataaattcaacgacaccaactctatcaagtttcctatttcttctggaatatttcctatcaattgattgtttgatagatcaatacttctcaaaa |
38748993 |
T |
|
| Q |
321 |
tgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
392 |
Q |
| |
|
||||||||| |||||||||| |||||||| |||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
38748992 |
tgagcttattattcttgaattatcgttctgcacctttccacatcaataatgcaaagaaatcatagccttcat |
38748921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 19 - 365
Target Start/End: Complemental strand, 37132624 - 37132278
Alignment:
| Q |
19 |
acttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagtt |
118 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||||| | ||||| |||||||| | |||||||||||||| | |
|
|
| T |
37132624 |
acttgaagcatcgaaactctgtaactgcgtgccaattggaattcttccagagagattgttatccgctagattcaacatggacacgcgatcaatttgagct |
37132525 |
T |
|
| Q |
119 |
agagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaat |
218 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||| | |||| |||||| |||||||| | |
|
|
| T |
37132524 |
agagaaggaggaattggaccagataaatggtttcttgacaagtcaagagaatcaagtgatgttaaccttccaatcttcgaagaaatttctcctgtcaact |
37132425 |
T |
|
| Q |
219 |
tgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaa |
318 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
37132424 |
tgttgcttgataaattcaatgacaccaactctatcaagtttcctatttcttctggaatgtctcctatcaattgatttcttgatagatcaatactcctcaa |
37132325 |
T |
|
| Q |
319 |
aatgagcttatcattcttgaatagtcgttctgtacctttccacatca |
365 |
Q |
| |
|
||||||||||| |||||||||| | ||||| |||||||| ||||| |
|
|
| T |
37132324 |
aatgagcttattattcttgaattgccgttccacacctttcctcatca |
37132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 392
Target Start/End: Original strand, 3022506 - 3022877
Alignment:
| Q |
21 |
ttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagttag |
120 |
Q |
| |
|
||||||||| ||||||||| | ||| || ||||||||||||||||| || || | |||| |||||||| |||| ||| | |||||| ||||||| ||| |
|
|
| T |
3022506 |
ttgaggcattgaaactctgcagctgcgtgccaattggaattcttccagagagataattatccgacagattcaacaaggacaagcgatctatttgagctag |
3022605 |
T |
|
| Q |
121 |
agaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattg |
220 |
Q |
| |
|
|||| | ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||||| |
|
|
| T |
3022606 |
agaaggtggaatcaaaccagagaaatggtttcttgacaagtcaagaaattcaagtgatgttaaccttccaatctttgaagtaatttttccattcaaattg |
3022705 |
T |
|
| Q |
221 |
ttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaaaa |
320 |
Q |
| |
|
||| ||||||||||||| |||||||| | ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3022706 |
ttgtttgataaattcaacgacaccaactccatcaagtttcctatttcttctggaatatttcctatcaattgattgcttgatagatcaatacttctcaaaa |
3022805 |
T |
|
| Q |
321 |
tgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
392 |
Q |
| |
|
||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
3022806 |
tgagcttattattcttgaattgtcgttctgcacctttccacatcaacaatgcaatcaaatcatagccttcat |
3022877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 11242613 - 11242701
Alignment:
| Q |
83 |
gacagatttaacatggaaaggcgatcaatttgagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaag |
174 |
Q |
| |
|
|||||||| |||| ||| ||||||||||||||| |||| ||||||||| | || ||||| |||||||||||||||||||||||||||| |
|
|
| T |
11242613 |
gacagattcaacaaggacaggcgatcaatttgacctaga---tgaggaattcgatcaatgaaacggtttcttgacaagtcaagaaattcaag |
11242701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 313
Target Start/End: Original strand, 14014674 - 14014838
Alignment:
| Q |
149 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatg |
248 |
Q |
| |
|
|||||||| || |||||||| ||||||||||||| ||||||||| |||||| ||||| ||| ||||| ||||| |||||||| ||||| || |||||| |
|
|
| T |
14014674 |
tttcttgagaaatcaagaaagtcaagtgatgttagctttccaatatttgaaggaattttccccgtcaagttgtttcttgataagttcaacgagaccaatt |
14014773 |
T |
|
| Q |
249 |
ctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
313 |
Q |
| |
|
||||| ||| |||||||| ||||| ||| ||| || |||||||| |||||||| |||||| |
|
|
| T |
14014774 |
gaatcaaatttgctatttctggtggaatctcttctgagaagtgattgctggatagatctatgctt |
14014838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 313
Target Start/End: Complemental strand, 13863366 - 13863207
Alignment:
| Q |
154 |
tgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatc |
253 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| || |||||| ||||| ||||||||| ||||| ||||||||||| | ||| |||||| ||| |
|
|
| T |
13863366 |
tgacaaatcaagaaattcaagtgatgttaaccttccgatatttgaaggaattttccctgtcaagttgtttcttgataaatttagtgagaccaattgaatc |
13863267 |
T |
|
| Q |
254 |
aagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
313 |
Q |
| |
|
|| ||| ||||||| ||||| ||| | | || ||||||||||||||||| |||||| |
|
|
| T |
13863266 |
aaatttgctatttcaggtggaatctcttccgaaaagtgattgcttgatagatctatgctt |
13863207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 14024805 - 14024903
Alignment:
| Q |
149 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
247 |
Q |
| |
|
|||| |||||| |||||||| ||||||||| ||||||||||||| |||||| ||||| |||||| || ||||| |||||||| |||||||| |||||| |
|
|
| T |
14024805 |
tttcgtgacaaatcaagaaagtcaagtgatattaactttccaattcttgaaggaattttccctgtgaagttgtttcttgataagttcaatgagaccaat |
14024903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 13875841 - 13875743
Alignment:
| Q |
149 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
247 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||||| ||||||||| |||||| ||||| |||||| || || || |||||||| |||||||| |||||| |
|
|
| T |
13875841 |
tttctagacaaatcaagaaagtcaagtgatgttagctttccaattcttgaaggaattttccctgtgaagttatttcttgataagttcaatgagaccaat |
13875743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 14110000 - 14110098
Alignment:
| Q |
149 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
247 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||| ||||| |||||||| ||||| || |||||| |
|
|
| T |
14110000 |
tttcgtgacaaatcaagaaagtcaagtgatgttagatttccaatatttgaaggaattttccctgtcaagttgtttcttgataagttcaacgagaccaat |
14110098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 13893540 - 13893460
Alignment:
| Q |
154 |
tgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaatt |
234 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||||| || |||||| ||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
13893540 |
tgacaaatcaagaaagtcaagtgatgttaattttccgatatttgaaggaattttccctgtcaagttgtttcttgataaatt |
13893460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 313
Target Start/End: Original strand, 14022254 - 14022406
Alignment:
| Q |
161 |
tcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatcaagtttc |
260 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| |||||| ||||| ||||| || ||||| |||||||| |||||||| |||||| ||||| || |
|
|
| T |
14022254 |
tcaagaaagtcaagtgatgttagctttccaatatttgaaggaatttttcctgtgaagttgtttcttgataagttcaatgagaccaattgaatcaaattcg |
14022353 |
T |
|
| Q |
261 |
ctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
313 |
Q |
| |
|
||||||| ||||| ||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
14022354 |
ctatttcaggtggaatctctcctgaaaagtgattgcttgagagatctatgctt |
14022406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 313
Target Start/End: Original strand, 14084206 - 14084358
Alignment:
| Q |
161 |
tcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatcaagtttc |
260 |
Q |
| |
|
|||||||| |||||||||| || |||||||| |||||| ||||| |||||| || ||||| |||||||||||||| || |||||| ||||| ||| |
|
|
| T |
14084206 |
tcaagaaagtcaagtgatgctagatttccaatatttgaaggaattttccctgtgaagttgtttcttgataaattcaaagagaccaattgaatcaaatttg |
14084305 |
T |
|
| Q |
261 |
ctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
313 |
Q |
| |
|
||||||| | ||||| ||||||| || ||||||||||| || || |||||| |
|
|
| T |
14084306 |
ctatttcatgtggaatctctcctgaaaagtgattgcttgagaggtctatgctt |
14084358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 13473521 - 13473431
Alignment:
| Q |
157 |
caagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
247 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||||||| |||||| ||||| |||||| |||||||| |||||||| ||||| || |||||| |
|
|
| T |
13473521 |
caagtcaagaaagtcaagtgatcttagttttccaatatttgaaggaattttccctgtaaaattgtttcttgataagttcaaagagaccaat |
13473431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 13931893 - 13931985
Alignment:
| Q |
155 |
gacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
247 |
Q |
| |
|
||||| |||||| | |||||||| |||| |||||||| |||| | ||||| |||||| || ||||| ||||||||||||||||| |||||| |
|
|
| T |
13931893 |
gacaaatcaagagagtcaagtgaagttagatttccaatatttgatggaattttccctgtgaagttgtttcttgataaattcaatgagaccaat |
13931985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 13911386 - 13911426
Alignment:
| Q |
149 |
tttcttgacaagtcaagaaattcaagtgatgttaactttcc |
189 |
Q |
| |
|
|||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
13911386 |
tttcgtgacaaatcaagaaagtcaagtgatgttaactttcc |
13911426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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