View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2128_high_1 (Length: 565)
Name: NF2128_high_1
Description: NF2128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2128_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 523; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 1 - 551
Target Start/End: Original strand, 32672687 - 32673237
Alignment:
| Q |
1 |
gaaccaaccaataaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaacatcacacaaaatcaccctccagcaagaaggcgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32672687 |
gaaccaaccaataaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaatatcacacaaaatcaccctccagcaagaaggcgg |
32672786 |
T |
|
| Q |
101 |
tacaaaactccacagttgtaaaatccaatgagactcaatcagcaaccaaacctttgatcaaagaactaagtttgccacacaactatgagcacatattgaa |
200 |
Q |
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|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32672787 |
tacaaaactccacagttgtaaaatgcgatgagactcaatcagcaaccaaacctttgatcaaagaactaagtttgtcacacaactatgagcacatattgaa |
32672886 |
T |
|
| Q |
201 |
ggatgcagattcaccggttgataaatcttcaagggaaaagatgtgtgatcagctatatgctggagtgttcttacatcataagactaaggcaagttcaata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32672887 |
ggatgcagattcaccggttgataaatcttcaagggaaaagatgtgtgatcagctatatgctggagtgttcttacatcataagactaaggcaagttcaata |
32672986 |
T |
|
| Q |
301 |
tcattcagtttcttatgaacgagaaattgaatttagttatttgcaagtttaagctaattctaattgaagatttgtttttatatattgaacaaattttaat |
400 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32672987 |
tcattcagtttcttatgaacgagcaattgaatttagttatttgcaagtttaagctaattctaattgaagatttttttttatatattgaacaaattttaat |
32673086 |
T |
|
| Q |
401 |
gattatcgttgtttgtagaaatattgggtagagaagaactccaaagccaactgtttcatgttgtatgcaagagcactctcaatcacctgggcagaagatc |
500 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32673087 |
gattatcgttgtttttagaaatattgggtagagaagaactccaaagccaactgtttcatgttgtatgcaagagcactctcaatcacctgggcagaagatc |
32673186 |
T |
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| Q |
501 |
caaattattggaaatggatacagcaaaaagatgttaggtacatatccttat |
551 |
Q |
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| T |
32673187 |
caaattattggaaatggatacagcaaaaagatgttaggtacatatccttat |
32673237 |
T |
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