View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2128_low_14 (Length: 252)
Name: NF2128_low_14
Description: NF2128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2128_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 49253221 - 49252997
Alignment:
| Q |
13 |
aaaattacattctcgaaatttgttttatgcgaataagagtcgctgaaaaataaaatttgttattaatgacaatattttacttgatacaatactaatacga |
112 |
Q |
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| T |
49253221 |
aaaagtacattctcgaaatttgttttatgcgaataagagtcattgaaaaataaaatttgttattaatgacaatattttacttgatacaatactaatacga |
49253122 |
T |
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| Q |
113 |
caatattaaatagagtaaaaatgttaagttttacttaactttgaaatcatcaaatatgaaaattatgtttttaatattcgaataaatccagaatttcact |
212 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
49253121 |
caatattaaatagagtaaaaatgttaacttttacttaactttgaaatcatcaaatatgaaaattatgtttttaatattcgaataaattcagaatttcact |
49253022 |
T |
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| Q |
213 |
taactatcaagctcacgtaattagt |
237 |
Q |
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||||||||||||||||||||||||| |
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| T |
49253021 |
taactatcaagctcacgtaattagt |
49252997 |
T |
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