View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21291_high_3 (Length: 339)

Name: NF21291_high_3
Description: NF21291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21291_high_3
NF21291_high_3
[»] chr2 (34 HSPs)
chr2 (17-321)||(19072286-19072591)
chr2 (35-112)||(769506-769583)
chr2 (35-112)||(3092720-3092797)
chr2 (35-112)||(33188787-33188864)
chr2 (35-113)||(1583329-1583407)
chr2 (35-112)||(7309434-7309511)
chr2 (35-111)||(44256108-44256184)
chr2 (35-110)||(8735965-8736040)
chr2 (35-114)||(39630700-39630779)
chr2 (35-108)||(11141779-11141852)
chr2 (35-112)||(19231015-19231091)
chr2 (34-113)||(2925124-2925203)
chr2 (35-110)||(13018219-13018294)
chr2 (35-110)||(35047201-35047276)
chr2 (34-110)||(14306364-14306440)
chr2 (35-115)||(32839183-32839263)
chr2 (34-110)||(28021706-28021782)
chr2 (35-114)||(17906116-17906195)
chr2 (35-118)||(21504924-21505007)
chr2 (35-108)||(7167190-7167263)
chr2 (35-108)||(7611421-7611494)
chr2 (35-112)||(41585192-41585269)
chr2 (35-84)||(11595279-11595328)
chr2 (35-84)||(11607181-11607230)
chr2 (35-112)||(30698755-30698832)
chr2 (35-110)||(31941430-31941505)
chr2 (35-112)||(31703921-31703998)
chr2 (38-110)||(32839715-32839787)
chr2 (35-89)||(30265805-30265859)
chr2 (35-108)||(2274312-2274384)
chr2 (44-113)||(44205190-44205259)
chr2 (52-104)||(6749566-6749618)
chr2 (50-112)||(10480269-10480331)
chr2 (67-112)||(7684611-7684656)
[»] chr3 (38 HSPs)
chr3 (35-114)||(43863482-43863561)
chr3 (35-110)||(53469951-53470026)
chr3 (35-110)||(24241711-24241786)
chr3 (35-113)||(34089050-34089128)
chr3 (35-115)||(36397506-36397586)
chr3 (35-114)||(28181794-28181873)
chr3 (38-112)||(7977028-7977102)
chr3 (35-112)||(35279468-35279545)
chr3 (35-110)||(48948056-48948131)
chr3 (35-112)||(2105204-2105281)
chr3 (34-111)||(21307110-21307187)
chr3 (35-114)||(42005469-42005548)
chr3 (35-113)||(671185-671263)
chr3 (35-110)||(37054870-37054945)
chr3 (35-112)||(21731393-21731470)
chr3 (35-116)||(48824628-48824709)
chr3 (35-112)||(52527484-52527561)
chr3 (35-106)||(34396148-34396219)
chr3 (34-113)||(38506481-38506560)
chr3 (35-110)||(50168191-50168266)
chr3 (35-88)||(30767027-30767080)
chr3 (35-110)||(47767900-47767975)
chr3 (35-113)||(7302867-7302945)
chr3 (35-104)||(645741-645810)
chr3 (50-115)||(47714426-47714491)
chr3 (50-110)||(19475966-19476026)
chr3 (35-106)||(13339095-13339166)
chr3 (50-112)||(33871762-33871824)
chr3 (35-104)||(28092138-28092206)
chr3 (35-91)||(2733028-2733084)
chr3 (50-110)||(8762276-8762336)
chr3 (38-110)||(26547455-26547526)
chr3 (35-106)||(13176195-13176266)
chr3 (35-110)||(44288024-44288099)
chr3 (35-102)||(53129434-53129501)
chr3 (34-80)||(6836590-6836636)
chr3 (35-89)||(31188940-31188994)
chr3 (35-87)||(47283823-47283875)
[»] chr8 (35 HSPs)
chr8 (35-117)||(33376822-33376904)
chr8 (35-110)||(29256913-29256988)
chr8 (35-110)||(44346221-44346296)
chr8 (35-113)||(14712-14790)
chr8 (35-109)||(31980047-31980121)
chr8 (35-113)||(43185454-43185532)
chr8 (35-110)||(29482341-29482416)
chr8 (35-114)||(33986471-33986550)
chr8 (35-109)||(31976666-31976740)
chr8 (35-113)||(1087843-1087921)
chr8 (35-104)||(40733641-40733710)
chr8 (35-110)||(35978592-35978667)
chr8 (35-109)||(10593547-10593620)
chr8 (36-110)||(34009164-34009238)
chr8 (35-110)||(24051746-24051821)
chr8 (35-110)||(28324223-28324298)
chr8 (35-110)||(29611797-29611872)
chr8 (35-108)||(24045438-24045511)
chr8 (35-108)||(26519984-26520057)
chr8 (38-110)||(9983125-9983197)
chr8 (35-110)||(44890072-44890147)
chr8 (34-108)||(8049650-8049724)
chr8 (35-108)||(13145058-13145131)
chr8 (35-112)||(31976116-31976193)
chr8 (47-95)||(8469885-8469933)
chr8 (38-112)||(36624808-36624882)
chr8 (64-113)||(7669139-7669188)
chr8 (50-115)||(30444801-30444866)
chr8 (52-95)||(7079780-7079823)
chr8 (50-108)||(36103250-36103308)
chr8 (52-112)||(23011885-23011946)
chr8 (71-115)||(13823458-13823502)
chr8 (38-108)||(15719406-15719476)
chr8 (52-109)||(26520509-26520565)
chr8 (35-112)||(28190229-28190306)
[»] chr7 (31 HSPs)
chr7 (35-113)||(39342157-39342235)
chr7 (35-110)||(23548119-23548194)
chr7 (35-112)||(2411786-2411863)
chr7 (35-110)||(28538677-28538752)
chr7 (35-110)||(36328328-36328403)
chr7 (35-113)||(14602768-14602846)
chr7 (38-110)||(42817000-42817072)
chr7 (35-114)||(40496193-40496272)
chr7 (35-110)||(45984808-45984883)
chr7 (35-110)||(45989168-45989243)
chr7 (35-110)||(35456279-35456354)
chr7 (35-110)||(41442603-41442678)
chr7 (35-110)||(43791496-43791571)
chr7 (38-111)||(40495677-40495750)
chr7 (47-110)||(14790554-14790617)
chr7 (35-106)||(30080312-30080383)
chr7 (35-104)||(30587436-30587505)
chr7 (35-110)||(26416395-26416469)
chr7 (35-110)||(32650998-32651073)
chr7 (35-108)||(9784455-9784529)
chr7 (38-93)||(13814519-13814574)
chr7 (36-110)||(45181757-45181830)
chr7 (35-108)||(38320753-38320825)
chr7 (52-110)||(26161987-26162045)
chr7 (36-110)||(35488688-35488761)
chr7 (74-115)||(40667834-40667875)
chr7 (35-112)||(46699745-46699822)
chr7 (34-110)||(37460470-37460546)
chr7 (65-95)||(3905264-3905294)
chr7 (68-114)||(29639059-29639105)
chr7 (35-91)||(5976138-5976193)
[»] chr6 (16 HSPs)
chr6 (35-110)||(1368950-1369025)
chr6 (35-111)||(8475603-8475679)
chr6 (35-118)||(6357817-6357900)
chr6 (34-114)||(724807-724887)
chr6 (34-110)||(10105479-10105555)
chr6 (35-114)||(15615916-15615995)
chr6 (35-112)||(1195778-1195855)
chr6 (47-113)||(9697874-9697940)
chr6 (38-108)||(31413337-31413407)
chr6 (35-112)||(28918631-28918708)
chr6 (35-108)||(15833081-15833154)
chr6 (50-110)||(34244843-34244903)
chr6 (50-113)||(34364894-34364957)
chr6 (58-110)||(13487433-13487485)
chr6 (64-113)||(26855475-26855524)
chr6 (176-217)||(29284120-29284161)
[»] chr5 (32 HSPs)
chr5 (35-110)||(17541884-17541959)
chr5 (35-114)||(41761740-41761819)
chr5 (35-113)||(22304731-22304809)
chr5 (35-107)||(22304657-22304729)
chr5 (35-113)||(32249646-32249724)
chr5 (35-112)||(927775-927852)
chr5 (34-114)||(15270413-15270493)
chr5 (35-110)||(12480374-12480449)
chr5 (36-110)||(33146556-33146630)
chr5 (35-108)||(28489936-28490009)
chr5 (35-110)||(6771823-6771898)
chr5 (35-110)||(22303388-22303463)
chr5 (34-113)||(33995441-33995520)
chr5 (47-114)||(40089408-40089475)
chr5 (34-108)||(14835264-14835338)
chr5 (35-109)||(37091061-37091135)
chr5 (47-110)||(13390962-13391025)
chr5 (35-106)||(37241163-37241234)
chr5 (38-108)||(10315126-10315196)
chr5 (52-114)||(25935147-25935209)
chr5 (52-110)||(35111702-35111760)
chr5 (38-111)||(8255434-8255507)
chr5 (50-114)||(12064314-12064378)
chr5 (35-114)||(28490380-28490460)
chr5 (35-112)||(1209140-1209215)
chr5 (37-102)||(38178813-38178878)
chr5 (37-102)||(38206037-38206102)
chr5 (35-110)||(15579998-15580074)
chr5 (50-110)||(20320529-20320589)
chr5 (50-113)||(19533764-19533827)
chr5 (50-117)||(37722747-37722814)
chr5 (69-112)||(41789591-41789633)
[»] chr4 (30 HSPs)
chr4 (35-110)||(42775780-42775855)
chr4 (35-110)||(2126311-2126386)
chr4 (35-110)||(35470597-35470672)
chr4 (35-110)||(40547768-40547843)
chr4 (35-114)||(28751740-28751819)
chr4 (35-113)||(41139945-41140023)
chr4 (38-110)||(16516644-16516716)
chr4 (35-107)||(47108693-47108765)
chr4 (35-110)||(30303593-30303668)
chr4 (38-107)||(42776561-42776630)
chr4 (35-112)||(46242620-46242697)
chr4 (34-110)||(21782445-21782521)
chr4 (35-88)||(26534961-26535014)
chr4 (38-113)||(24705806-24705881)
chr4 (35-114)||(31948046-31948125)
chr4 (38-113)||(54566650-54566725)
chr4 (35-114)||(56118165-56118244)
chr4 (35-108)||(46242169-46242241)
chr4 (50-112)||(10633181-10633243)
chr4 (35-109)||(13318216-13318289)
chr4 (35-109)||(27284221-27284295)
chr4 (35-106)||(16299781-16299852)
chr4 (58-112)||(21012437-21012491)
chr4 (43-92)||(56339549-56339598)
chr4 (58-110)||(31474007-31474059)
chr4 (43-110)||(29091606-29091673)
chr4 (63-110)||(41983369-41983416)
chr4 (67-113)||(3803731-3803777)
chr4 (35-80)||(17727519-17727564)
chr4 (35-110)||(19461266-19461341)
[»] chr1 (32 HSPs)
chr1 (35-110)||(946854-946929)
chr1 (35-115)||(15467481-15467561)
chr1 (35-116)||(28632120-28632201)
chr1 (35-112)||(37447424-37447501)
chr1 (35-115)||(37036499-37036579)
chr1 (35-110)||(32128558-32128633)
chr1 (35-108)||(44571665-44571738)
chr1 (34-110)||(220626-220702)
chr1 (35-110)||(6470228-6470304)
chr1 (35-113)||(39887540-39887618)
chr1 (35-112)||(37446881-37446958)
chr1 (35-95)||(32647767-32647827)
chr1 (35-110)||(21267346-21267421)
chr1 (35-110)||(35499523-35499598)
chr1 (35-110)||(8225247-8225322)
chr1 (34-105)||(41822078-41822149)
chr1 (43-113)||(37447968-37448038)
chr1 (50-112)||(47541849-47541911)
chr1 (34-94)||(10166968-10167028)
chr1 (35-107)||(44571152-44571224)
chr1 (35-91)||(50472190-50472246)
chr1 (46-112)||(31166697-31166763)
chr1 (52-113)||(12293019-12293080)
chr1 (35-111)||(41822751-41822827)
chr1 (63-110)||(31196904-31196951)
chr1 (35-110)||(48954019-48954094)
chr1 (35-108)||(23955981-23956054)
chr1 (67-110)||(24273084-24273127)
chr1 (50-105)||(26500947-26501002)
chr1 (35-106)||(32202226-32202297)
chr1 (50-108)||(47165077-47165135)
chr1 (34-110)||(4663784-4663859)
[»] scaffold0318 (1 HSPs)
scaffold0318 (35-110)||(3331-3406)
[»] scaffold0301 (1 HSPs)
scaffold0301 (35-95)||(7626-7686)
[»] scaffold0169 (1 HSPs)
scaffold0169 (34-113)||(4492-4571)
[»] scaffold0337 (2 HSPs)
scaffold0337 (35-88)||(15959-16012)
scaffold0337 (39-95)||(15501-15557)
[»] scaffold0065 (2 HSPs)
scaffold0065 (35-88)||(3001-3054)
scaffold0065 (39-95)||(2543-2599)
[»] scaffold0417 (1 HSPs)
scaffold0417 (35-107)||(11499-11571)
[»] scaffold0129 (1 HSPs)
scaffold0129 (35-84)||(19333-19382)
[»] scaffold0047 (1 HSPs)
scaffold0047 (35-108)||(49838-49911)
[»] scaffold0400 (1 HSPs)
scaffold0400 (35-110)||(4020-4095)
[»] scaffold0365 (1 HSPs)
scaffold0365 (35-110)||(4664-4739)
[»] scaffold0002 (1 HSPs)
scaffold0002 (35-106)||(130722-130793)


Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 17 - 321
Target Start/End: Original strand, 19072286 - 19072591
Alignment:
Q  17 aatatgacaataaaattttttaa-ttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |    
T  19072286 aatatgacaatgaaatttttttacttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattatctcatccaaacacactctaagaa 19072385  T
Q  116 attctgataatcttgagttttgttaattaagtgacgtgttcaaggtttaaactctaacctctacatataacaatacattattcttaccaactgagttatg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  19072386 attctgataatcttgagttttgttaattaagtgacgtgttcaaagttcaaactctaacctctacatataataatgcattattcttaccaactgagttatg 19072485  T
Q  216 cttatcgggagaaatgacatttttaatttaatgaactatctcttaaattattggataagaaaaaccaatgattagatttttaacgtgattttattatgct 315  Q
    ||| |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19072486 cttttcgggacaaaggacatttttaatttaatgaactatctcttaaagtattggataagaaaaacaaatgattagatttttaacgtgattttattatgct 19072585  T
Q  316 gtctat 321  Q
    ||||||    
T  19072586 gtctat 19072591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 769506 - 769583
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  769506 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 3092720 - 3092797
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3092720 tttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 3092797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 33188864 - 33188787
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33188864 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 33188787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 1583407 - 1583329
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1583407 tttaatggaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 1583329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 7309511 - 7309434
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7309511 tttaattgaatcatttaaattgcttagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 7309434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 44256108 - 44256184
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  44256108 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacatactcta 44256184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 8736040 - 8735965
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8736040 tttaattgaatcatttaaattgcttaggattctaaattctttaaaatttcccaattacctcatccaaacacactct 8735965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 39630700 - 39630779
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  39630700 tttaattgaatcatttaaattgcctagaattttaaattttttaaaatttctcaattacctcatccaaacacactctaagg 39630779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 11141779 - 11141852
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11141779 tttaatggaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 19231091 - 19231015
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19231091 tttaattgaatcatttaaattgcctagaattctaa-ttctttaaaatttctcaattacctcatccaaacacactctaa 19231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 2925124 - 2925203
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  2925124 ttttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattacttcatccaaacacactctaag 2925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 13018219 - 13018294
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  13018219 tttaattgaattatttaaattacctagaattttaaattctttataatttctcaattacctcatccaaacacactct 13018294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 35047276 - 35047201
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  35047276 tttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattaccccatccaaacacactct 35047201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 14306440 - 14306364
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||| ||||| ||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14306440 ttttaattgaaccattttaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 14306364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 32839263 - 32839183
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  32839263 tttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattacctcatctaaacacactcttagga 32839183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 28021782 - 28021706
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||| ||||  | || ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  28021782 ttttaattgaatcatttgaattgtcaagaattctaaattctttaaaatttctcaattagctcatccaaacacactct 28021706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 17906116 - 17906195
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||| |||||||||| |||  ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  17906116 tttaattgaattatttaaattatctataattttaaattctttataatttttcaattacctcatccaaacacactctaagg 17906195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 21504924 - 21505007
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaatt 118  Q
    ||||||| || |||||||||| | ||| |||||||||||||||||||||| |||||||||| |||||||||||| | |||||||    
T  21504924 tttaattaaaacatttaaattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacacttttaggaatt 21505007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 7167263 - 7167190
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||    
T  7167263 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacact 7167190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 7611494 - 7611421
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||  | ||||||||||||    
T  7611494 tttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaattactccatccaaacacact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 41585269 - 41585192
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||| |||||||||||||||  | || ||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  41585269 tttaaatgaatcatttaaattgtcaagaattctaaattctttaaaatttatcaattacctcatccaaagacactctaa 41585192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 11595279 - 11595328
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttc 84  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11595279 tttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 11607181 - 11607230
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttc 84  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11607181 tttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 30698755 - 30698832
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||| |||||||| |||||||||  ||||||||||||| |||||||||||| |||  | ||||||||||||||||    
T  30698755 tttaattaaatcatttgaattacctaaaattctaaattcttcaaaatttctcaaatactccatccaaacacactctaa 30698832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 31941430 - 31941505
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||| |||| ||||  |||  ||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  31941430 tttaattgaataatttgaattgtctataattctaaattcttgaaaatttatcaattacctcgtcaaaacacactct 31941505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 31703998 - 31703921
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||| ||||  |||| |||||||||| | ||||||||  |||||||||| | ||||||||||||||    
T  31703998 tttaattgaatcatttgaattgactagaattctaaattatctaaaattttccaattacctcattcaaacacactctaa 31703921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 32839787 - 32839715
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||| ||||  |||| ||||||||||||| ||||||||||||||||| |  ||||||| |||||    
T  32839787 aattgaatcatttgaattctctagaattctaaattcttcaaaatttctcaattaccccacccaaacaaactct 32839715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 30265805 - 30265859
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaat 89  Q
    ||||||| |||||||| |||| | ||| |||||||||||||||||||||||||||    
T  30265805 tttaatttaatcatttgaattgcttagaattctaaattctttaaaatttctcaat 30265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 2274384 - 2274312
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||||||||  |||  ||| |||||| ||||||||||| ||||||||| ||||||| |||||    
T  2274384 tttaattgaatcatttaaattgtctaaaattataaattatttaaaatttc-caattacctagtccaaatacact 2274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 44205259 - 44205190
Alignment:
Q  44 atcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||| ||  |||| ||||||||||||| |||| ||||||||||  || |||||||||||||||||    
T  44205259 atcatttaagttgtctagaattctaaattcttaaaaaattctcaattatatcatccaaacacactctaag 44205190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 6749566 - 6749618
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaaca 104  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| | ||||||||    
T  6749566 aattccctagaattctaaattcttcaaaatttctcaattaccccatccaaaca 6749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 10480269 - 10480331
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||| ||||| ||| |||||||||||||||||   ||||||||| ||||| ||||||||||    
T  10480269 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaagcacactctaa 10480331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 7684611 - 7684656
Alignment:
Q  67 taaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||| | ||||||||  ||||||||||||||||    
T  7684611 taaattctttaaaatttttaaattaccttatccaaacacactctaa 7684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 43863561 - 43863482
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43863561 tttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 43863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 53470026 - 53469951
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53470026 tttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 53469951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 24241786 - 24241711
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24241786 tttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactct 24241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 34089050 - 34089128
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  34089050 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactctaag 34089128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 36397586 - 36397506
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  36397586 tttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagga 36397506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 28181873 - 28181794
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  28181873 tttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacctcgtccaaacacactataagg 28181794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 7977028 - 7977102
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  7977028 aattgaatcatttaaattgcctaggattcgaaattctttaaaatttcccaattacctcatccaaacacactctaa 7977102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 35279545 - 35279468
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  35279545 tttaattgaatcatttaaattacttagaattctaaattctttaaaatttcccaattgcctcatccaaacacactctaa 35279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 48948056 - 48948131
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  48948056 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacatactct 48948131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 2105204 - 2105281
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||  | ||||||||||||||||    
T  2105204 tttaattgaatcatttaaattacctagaattataaattcttcaaaatttctcaattactccatccaaacacactctaa 2105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 21307187 - 21307110
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  21307187 ttttaattgaatcatttcaattatctaaaattctaaattctttaaaatttcccaattacctcatccaaacacactcta 21307110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 42005548 - 42005469
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||||||||    
T  42005548 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactctaagg 42005469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 671263 - 671185
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||||||||||||  |||  ||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  671263 tttaattgaatcatttaaattgtctataattttatattctttaaaatttctcaattacctcatccaaacacactctaag 671185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 37054870 - 37054945
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||||    
T  37054870 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 37054945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 21731393 - 21731470
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||| ||||||||| ||||| ||| |||||||| | |||||| ||||||||||| ||||||||||||||||    
T  21731393 tttaattgaattatttaaattgcctagaattttaaattctcttaaatttatcaattacctcatccaaacacactctaa 21731470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 48824709 - 48824628
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaa 116  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||  |||||||||  ||||||||||| | ||||||    
T  48824709 tttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccttatccaaacacacgccaaggaa 48824628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 52527484 - 52527561
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||||||||   ||| |||||||||| ||||||||||  |||||||||| ||||||||||||||||    
T  52527484 tttaattgaatcatttaaattttttagaattctaaattttttaaaattttccaattacctcatccaaacacactctaa 52527561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 34396219 - 34396148
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    ||||||||||||||||||||| ||||| ||| |||| ||||||||||||  |||||||||| ||||||||||    
T  34396219 tttaattgaatcatttaaattgcctagaattttaaactctttaaaattttccaattacctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 38506560 - 38506481
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| ||||||||||||||| ||||  |||||||||||||||||||||  ||||||| || | |||||||||||||||    
T  38506560 ttttaaatgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattacttcattcaaacacactctaag 38506481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 50168266 - 50168191
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||  ||||||||| || || |||||  |||||||||||||||||||||||||| ||||||||||||||    
T  50168266 tttaattgaagtatttaaattgccaagaattctcgattctttaaaatttctcaattacctcatccaaacacactct 50168191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 30767027 - 30767080
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaa 88  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  30767027 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaa 30767080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 47767900 - 47767975
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| ||||| || | ||||||||||||| |||||||||||| |||  | ||||||||||||||    
T  47767900 tttaattgaatcatttgaattatcttgaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 47767975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 7302867 - 7302945
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||||| | ||||| |||| ||||||||||||| |||||||||||| |||    |||||||||||||||||    
T  7302867 tttaattgaatcatatgaattatctagaattctaaattcttcaaaatttctcaaatactcaatccaaacacactctaag 7302945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 645810 - 645741
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaaca 104  Q
    |||||| ||||||||| |||||| | | |||||||||||||||||||||  |||||||||| ||||||||    
T  645810 tttaatcgaatcatttgaattacttggaattctaaattctttaaaattttccaattacctcatccaaaca 645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 47714426 - 47714491
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||| ||||| |||  |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  47714426 taaattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactctaagga 47714491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 19475966 - 19476026
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  19475966 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 19476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 13339166 - 13339095
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||  |  ||||||||| ||||||||    
T  13339166 tttaattgaatcatttaaattgcctaaaattctaaattcttcaaaattttccgtttacctcgtacaaacaca 13339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 33871824 - 33871762
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| |||| |||||||||||    
T  33871824 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccacacacactctaa 33871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 28092138 - 28092206
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaaca 104  Q
    |||||||||||||| |||||| ||||| ||| |||||||||||||||||  |||||| ||| ||||||||    
T  28092138 tttaattgaatcatataaattgcctagaatt-taaattctttaaaattttccaattagctcatccaaaca 28092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 2733028 - 2733084
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaatta 91  Q
    |||||||||||  ||| |||| ||||| ||||||||||| |||||||||||||||||    
T  2733028 tttaattgaatttttttaattgcctagtattctaaattccttaaaatttctcaatta 2733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 8762276 - 8762336
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||| ||||| ||| |||||||||||||||||   ||||||||| ||||||||||||||    
T  8762276 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 8762336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 26547455 - 26547526
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||| |||| ||||  ||||||||||| | |||| |||||||||||| | ||||||||||||||    
T  26547455 aattgaatcatttgaattccctaaaattctaaattcatcaaaa-ttctcaattaccccatccaaacacactct 26547526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 13176266 - 13176195
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||  || ||||||| | ||||||||    
T  13176266 tttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacctcatacaaacaca 13176195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 44288099 - 44288024
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||| ||| ||||  |||  ||| |||||| || ||||||||  ||||||||||||||||||||||||    
T  44288099 tttaattgaatcttttgaattgtctaaaattataaatttttcaaaatttcctaattacctcgtccaaacacactct 44288024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 53129501 - 53129434
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaa 102  Q
    ||||||||||||||||||||| |||   ||||||||||| ||||||    ||||||||||||||||||    
T  53129501 tttaattgaatcatttaaattgccttaaattctaaattccttaaaaaaattcaattacctcgtccaaa 53129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 6836636 - 6836590
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaa 80  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  6836636 ttttaattgaatcatttgaattgcctaaaattctaaattctttaaaa 6836590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 31188994 - 31188940
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaat 89  Q
    |||||||||||||||| ||||   ||| ||||||| |||||||||||||||||||    
T  31188994 tttaattgaatcatttgaattgtttagaattctaatttctttaaaatttctcaat 31188940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 47283875 - 47283823
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctca 87  Q
    ||||| ||||||||||||||||| ||  ||| ||||||||| |||||||||||    
T  47283875 tttaaatgaatcatttaaattacttaaaattttaaattcttcaaaatttctca 47283823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 33376904 - 33376822
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaat 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  33376904 tttaattgaatcatttaaattacctagaattctaaattctttaaaatttatcaattacctcatccaaacacactctaaggaat 33376822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 29256988 - 29256913
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29256988 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactct 29256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 44346296 - 44346221
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44346296 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 44346221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 14712 - 14790
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  14712 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatttcctcatccaaacacactctaag 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 31980121 - 31980047
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31980121 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 43185454 - 43185532
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43185454 tttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 43185532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 29482416 - 29482341
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29482416 tttaattgaatcatttaaatttcctataattctaaattctttaaaatttctcaattacctcatccaaacacactct 29482341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 33986471 - 33986550
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  33986471 tttaattgaatcatttaaattgcctagaattccgaattctttaaaatttctcaattacctcatccaaacacactctaagg 33986550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 31976740 - 31976666
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  31976740 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 1087921 - 1087843
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  1087921 tttaattgaatcatttaaatttcctaaaattctaaattctttaaaatttctcaattacctcattcaaacatactctaag 1087843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 40733710 - 40733641
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaaca 104  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  40733710 tttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 35978667 - 35978592
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||  |||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  35978667 tttaattgaatcatttaaattgactagaattttaaattctttaaaatttctcaattgcctcatccaaacacactct 35978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 10593547 - 10593620
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||| |||||||||||||    
T  10593547 tttaattgaatcatttaaattgcctagaattttaaatt-tttaaaatttctcaattacctcatccaaacacactc 10593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 34009164 - 34009238
Alignment:
Q  36 ttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||| ||||||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  34009164 ttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactct 34009238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 24051746 - 24051821
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||||    
T  24051746 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 24051821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 28324298 - 28324223
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||||    
T  28324298 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 28324223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 29611797 - 29611872
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||  |||||||| | ||||||||||||||    
T  29611797 tttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccacatccaaacacactct 29611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 24045438 - 24045511
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||    
T  24045438 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacact 24045511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 26520057 - 26519984
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||| |  ||||||||||||    
T  26520057 tttaattgaatcatttaaattgcctagaattttaaattctttaaaatttatcaattactttatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 9983125 - 9983197
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||| ||||   ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9983125 aattgaatcatttgaattgattagaattctaaattcttcaaaatttctcaattacctcatccaaacacactct 9983197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 44890072 - 44890147
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||| ||| |||| |||||||||| |||||||||| || ||||||||||||||||||  ||||||||||||||    
T  44890072 tttaatttaataatttgaattacctagaattctaaatttttcaaaatttctcaattaccttatccaaacacactct 44890147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 8049650 - 8049724
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||||||||||||| |||||| ||| | ||||||||||||||||  | ||||||||||| ||||||||||||    
T  8049650 ttttaattgaatcatttgaattacatagaactctaaattctttaaaaaatttcaattacctcatccaaacacact 8049724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 13145058 - 13145131
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||| ||||||||||||| ||||| ||| ||||||||||||| |||| ||||||||||  |||||||||||    
T  13145058 tttaattaaatcatttaaattgcctagaattttaaattctttaaattttcccaattacctcacccaaacacact 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 31976193 - 31976116
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||| |||||||||| ||||||||||||| |   ||| ||||||||||| |||||||||| |||||    
T  31976193 tttaattgaatcatttgaattacctagaattctaaattcttaattttttttcaattacctcatccaaacacattctaa 31976116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 8469885 - 8469933
Alignment:
Q  47 atttaaattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8469885 atttgaattacctagaattctaaattctttaaaatttctcaattacctc 8469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 36624882 - 36624808
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||| |||| | ||| ||||||||||||| ||||||||||||||| | | || |||||||||||||    
T  36624882 aattgaatcatttgaattccttagaattctaaattcttcaaaatttctcaattatcccatctaaacacactctaa 36624808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 7669139 - 7669188
Alignment:
Q  64 ttctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  7669139 ttctaaattctttgaaatttctcaattaccccatccaaacacactctaag 7669188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 30444866 - 30444801
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||| ||||| ||| ||||||||||||||||||  |||||| || |||||||||||||||||||    
T  30444866 taaattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactctaagga 30444801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 7079780 - 7079823
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  7079780 aattacctagaattttaaattctttaaaatttctcaattacctc 7079823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 36103250 - 36103308
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||    
T  36103250 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 23011885 - 23011946
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtcc-aaacacactctaa 112  Q
    |||| ||||| ||| ||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  23011885 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaaacacactctaa 23011946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 13823458 - 13823502
Alignment:
Q  71 ttctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    ||||| |||||||||||||||| || |||||||||||||||||||    
T  13823458 ttcttcaaaatttctcaattacttcatccaaacacactctaagga 13823502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 15719406 - 15719476
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||||  ||| |||| ||||  ||| |||||| ||||||||||||||||||||| || ||||||||||    
T  15719406 aattgaatagtttgaattgcctaaaattttaaattttttaaaatttctcaattaccttgttcaaacacact 15719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 26520565 - 26520509
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    |||| ||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||    
T  26520565 aattccctagaattctaaat-cttcaaaatttctcaattaccccatccaaacacactc 26520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 28190306 - 28190229
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| | ||| ||||||| |||||| ||||||   ||||| ||| | |||| |||||||||    
T  28190306 tttaattgaatcatttaaattgcgtagaattctaagttctttcaaattttcgaattatctcattcaaatacactctaa 28190229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 39342235 - 39342157
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39342235 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 39342157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 23548194 - 23548119
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23548194 tttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 23548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 2411786 - 2411863
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2411786 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacactctctaa 2411863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 28538752 - 28538677
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28538752 tttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactct 28538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 36328403 - 36328328
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  36328403 tttaattgaatcatttaaattgcctagaattctaaattttttaaaatttctcaattacctcatccaaacacactct 36328328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 14602846 - 14602768
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  14602846 tttaattgaattatttaaattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacacactctaag 14602768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 42817000 - 42817072
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  42817000 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatcctaacacactct 42817072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 40496193 - 40496272
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  40496193 tttaattgaatcatttaaattgcctagaattataaattctttaaaatttcttaattacctcatccaaacatactctaagg 40496272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 45984808 - 45984883
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| | ||||||||||||||    
T  45984808 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactct 45984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 45989168 - 45989243
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| | ||||||||||||||    
T  45989168 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactct 45989243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 35456279 - 35456354
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||| ||||||||||||||    
T  35456279 tttaattgaattatttaaattgcctagaattctaaattctttaaaaattttcaattacctcatccaaacacactct 35456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 41442678 - 41442603
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||   ||||||||||||||    
T  41442678 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaattacccaatccaaacacactct 41442603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 43791496 - 43791571
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  43791496 tttaattgaatcatttaaattgccaagaattctaaattctttaaaattttccaattacctcatccaaacacactct 43791571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 40495677 - 40495750
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  40495677 aattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattacctcatccaaacacactcta 40495750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 14790554 - 14790617
Alignment:
Q  47 atttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  14790554 atttaaattgcctaggattctaaattctttaaaattttccaattacctcatccaaacacactct 14790617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 30080383 - 30080312
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    ||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||| || |||||||    
T  30080383 tttaattgaatcatttaaattgcttagaattctaaattcttcaaaatttctcaattacctcatcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 30587505 - 30587436
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaaca 104  Q
    |||||||||||| |||||||| ||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  30587505 tttaattgaatcttttaaattgcctagaattctaaattctctaaaattttccaattacctcgtccaaaca 30587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 26416395 - 26416469
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  26416395 tttaattgaattatttagattgcctagaattctaaattcttcaaaatttctcaattacctcat-caaacacactct 26416469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 32650998 - 32651073
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||  |||||||||||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| ||||||    
T  32650998 tttaattacatcatttaaattgcctaggattctgaattctttaagatttcccaattacctcatccaaactcactct 32651073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 9784529 - 9784455
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattcttt-aaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||| |||||| ||||  ||| |||||||||| |||||||||||||||| |||||||||||||||    
T  9784529 tttaattgaatcatctaaattgcctaaaattttaaattcttttaaaatttctcaattacttcgtccaaacacact 9784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 13814574 - 13814519
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacc 93  Q
    ||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||    
T  13814574 aattgaatcatttgaattccctagaattctaaattcttcaaaatttctcaattacc 13814519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 45181830 - 45181757
Alignment:
Q  36 ttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||| |||| |||| ||||| |||||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  45181830 ttaattgaataatttcaattgcctagaattctaaactctctaaaattt-tcaattacctcatccaaacacactct 45181757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 38320753 - 38320825
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||| ||||||| |||| ||||| ||| ||||||||||||||||| ||||||||| | ||||||||||||    
T  38320753 tttaattgtatcatttgaattgcctagaattttaaattctttaaaattt-tcaattaccacatccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 26162045 - 26161987
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  26162045 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 35488688 - 35488761
Alignment:
Q  36 ttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||   |||  ||| ||||||||||||||||| |||||||| || ||||||||||||||    
T  35488688 ttaattgaatcatttaaataggctaaaattttaaattctttaaaattt-tcaattacatcatccaaacacactct 35488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 40667834 - 40667875
Alignment:
Q  74 tttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  40667834 tttaaaatttctcaattacctcatccaaacacactcttagga 40667875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 46699822 - 46699745
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||| |||| |||| | ||  ||||||||||||| |||||||||||| || | |||| |||||||||||||    
T  46699822 tttaattgaataatttgaattgcataaaattctaaattcttcaaaatttctcaactatcccgtctaaacacactctaa 46699745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 37460546 - 37460470
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||| ||||||| |||| ||||  |||| ||| |||||||||||||| || ||||||||||| |||||| |||||||    
T  37460546 tttttattgaattatttgaattgtctagaattttaaattctttaaaaattttcaattacctcatccaaatacactct 37460470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 95
Target Start/End: Complemental strand, 3905294 - 3905264
Alignment:
Q  65 tctaaattctttaaaatttctcaattacctc 95  Q
    |||||||||||||||||||||||||||||||    
T  3905294 tctaaattctttaaaatttctcaattacctc 3905264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 29639105 - 29639059
Alignment:
Q  68 aaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||   ||||||||| ||||||||||||||||||    
T  29639105 aaattctttaaaattttcaaattacctcatccaaacacactctaagg 29639059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 5976193 - 5976138
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaatta 91  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||| | |||||||    
T  5976193 tttaattgaatcatttaaattatcta-gatccaaaattctttaaaatgtatcaatta 5976138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 1368950 - 1369025
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  1368950 tttaattgaatcatttaaattacctagaattttaaattctttataatttctcaattacctcgtccaaacacactct 1369025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 8475603 - 8475679
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  8475603 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatctaaacacactcta 8475679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 6357900 - 6357817
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaatt 118  Q
    ||||||||||||||||||||||| ||  ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  6357900 tttaattgaatcatttaaattacttaaaattctaaattcttcaaaatttcccaattacctcgtccaaacacactctaaagaatt 6357817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 724887 - 724807
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    |||| ||| |||||||| |||||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  724887 ttttcatttaatcatttgaattacctagaattctaaattcttaaaaaattctcaattacctcatccaaacacactctaagg 724807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 10105479 - 10105555
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||  |||| ||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  10105479 ttttaattgaatcattggaattgcctacaagtctaaattctttaaaatttctcaattacctcatccaaacacactct 10105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 15615995 - 15615916
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||| |||||| |||| ||||  ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15615995 tttaattgattcatttgaattgcctaatattttaaattctttaaaatttatcaattacctcatccaaacacactctaagg 15615916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 1195778 - 1195855
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||| ||||||||| ||||| |||  ||||||| |||||||||||||||||||| | ||||||||||||||    
T  1195778 tttaattgaattatttaaattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactctaa 1195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 9697874 - 9697940
Alignment:
Q  47 atttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  9697874 atttaaattatctaaaattctaaattctttaaaatttctcaattactccatccaaacacactctaag 9697940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 31413337 - 31413407
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||| |||||||| |||| ||||| ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  31413337 aatttaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacacact 31413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 28918631 - 28918708
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||| | ||| ||| |||||| |||| |||||||||||||| | ||| |||||||||||||    
T  28918631 tttaattgaatcatttaaattgcatagaattttaaattatttataatttctcaattactttgtctaaacacactctaa 28918708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 15833081 - 15833154
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||| |||||||| |||||||||  ||||| ||||||| ||||||||||||||||  | ||||||||||||    
T  15833081 tttaattaaatcatttgaattacctaaaattctgaattcttcaaaatttctcaattactccatccaaacacact 15833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 34244903 - 34244843
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  34244903 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 34244843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 34364894 - 34364957
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| ||||| ||| |||||||||||||||||   ||||||||| |||||||||||||||||    
T  34364894 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctaag 34364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 13487433 - 13487485
Alignment:
Q  58 ctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  13487433 ctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 13487485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 26855524 - 26855475
Alignment:
Q  64 ttctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||| ||||||||||||||| ||| | |||||||||| ||||    
T  26855524 ttctaaattcttcaaaatttctcaattatctcattcaaacacactataag 26855475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 29284161 - 29284120
Alignment:
Q  176 ctacatataacaatacattattcttaccaactgagttatgct 217  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  29284161 ctacatataataatacattgttcctaccaactgagttatgct 29284120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 17541959 - 17541884
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17541959 tttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactct 17541884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 41761819 - 41761740
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41761819 tttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactctaagg 41761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 22304809 - 22304731
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||    
T  22304809 tttaattgaatcatttaaattgcctaggattctaaattctttaaaatttcccaattacctcatcaaaatacactctaag 22304731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 22304657 - 22304729
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacac 107  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22304657 tttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 22304729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 32249724 - 32249646
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  32249724 tttaattgaatcatttaaattgcctagaattctaaattctttaaaattttcaaattacctcatccaaacacactctaag 32249646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 927775 - 927852
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  927775 tttaattaaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcattcaaacacactctaa 927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 15270493 - 15270413
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||  |||||||||| | |||||||| |||||||    
T  15270493 ttttaattgaatcatttcaattacctagaattctaaattctttaaaattttccaattacctcattcaaacacattctaagg 15270413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 12480374 - 12480449
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  12480374 tttaattgaatcatttaaattgcttagaattctaaattctttaaaattttccaattacctcatccaaacacactct 12480449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 33146556 - 33146630
Alignment:
Q  36 ttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||| ||||||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  33146556 ttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactct 33146630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 28489936 - 28490009
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||   ||||||||| ||||||||||||    
T  28489936 tttaattgaatcatttaaattgcctaggattctaaattccttaaaattttctaattacctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 6771898 - 6771823
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  6771898 tttaattgaatcatttgaattgcatagaattctaaattctttaaaatttcccaattaactcatccaaacacactct 6771823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 22303463 - 22303388
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||  | ||||||||||||||    
T  22303463 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 22303388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 33995520 - 33995441
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||| |||| ||||  ||||||| ||||||||||||| |||||||| || |||||||||||||||||    
T  33995520 ttttaattgaatcatttgaattgcctaaaattctaatttctttaaaatttgtcaattacatcatccaaacacactctaag 33995441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 40089475 - 40089408
Alignment:
Q  47 atttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||| ||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  40089475 atttaaattgcctaggaatctaaattctttaaaatttcctaattacctcatccaaacacactctaagg 40089408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 14835264 - 14835338
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||| |  ||||||||||||    
T  14835264 ttttaattgaatcatttaaattacctaaacttctaaattctttaaaatttcccaattactttatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 37091061 - 37091135
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    |||||||||||||||| ||||||||||  ||||||||||||||| ||||  |||||||||| |||||||||||||    
T  37091061 tttaattgaatcattttaattacctagagttctaaattctttaagatttaccaattacctcatccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 13391025 - 13390962
Alignment:
Q  47 atttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13391025 atttaaattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacactct 13390962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 37241234 - 37241163
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    ||||||||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||| | ||||||||||    
T  37241234 tttaattgaataatttgaattaactagaattctaaattcttcaaaatttctcaattaccccatccaaacaca 37241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 10315126 - 10315196
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  10315126 aattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattaccccatccaaacacact 10315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 25935209 - 25935147
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    |||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  25935209 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaagg 25935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 35111702 - 35111760
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  35111702 aattccctagaattctaaattctttaaaatttctcaattaccccatccaaacacactct 35111760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 8255434 - 8255507
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    |||||||||||||||||| ||||  ||| ||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  8255434 aattgaatcatttaaattgcctaaaattataaattcttcaaaatttctcaattatctcatccaaacatactcta 8255507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 12064378 - 12064314
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  12064378 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 12064314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 28490380 - 28490460
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattcttt-aaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||| | ||| |||||||||| ||||  | ||||||||||| ||||||||||||||||||    
T  28490380 tttaattgaatcatttaaattgccttgaattttaaattctttaaaaaaatttcaattacctcatccaaacacactctaagg 28490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 1209140 - 1209215
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||||||||  |||   ||||||||||||||||||||||||||   ||| ||||||||||||||||    
T  1209140 tttaattgaatcatttaaattgtctaaatttctaaattctttaaaatttctcaat--gctcatccaaacacactctaa 1209215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 38178878 - 38178813
Alignment:
Q  37 taattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaa 102  Q
    ||||||| ||||||||||| ||||  |||||||||||||||||||||  |||||||||| ||||||    
T  38178878 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 38206102 - 38206037
Alignment:
Q  37 taattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaa 102  Q
    ||||||| ||||||||||| ||||  |||||||||||||||||||||  |||||||||| ||||||    
T  38206102 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38206037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 15580074 - 15579998
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaatta-cctcgtccaaacacactct 110  Q
    |||||||||||||||||||||  |||| ||| |||||| |||||||||||  ||||| |||| ||||||||||||||    
T  15580074 tttaattgaatcatttaaattgtctagaattttaaattttttaaaatttcctaattaccctcatccaaacacactct 15579998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 20320589 - 20320529
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||| ||||| ||| |||||||||||||||||   ||||||||| ||||||||||||||    
T  20320589 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 20320529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 19533827 - 19533764
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| | |||||||||| ||||    
T  19533827 taaattgcctagaattttaaattctttaaaatttccaaattacctcattcaaacacactataag 19533764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 37722814 - 37722747
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaat 117  Q
    |||||||||||| ||| ||||||||||||||||||  ||||||    |||||||||||||| ||||||    
T  37722814 taaattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactcttaggaat 37722747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 41789591 - 41789633
Alignment:
Q  69 aattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  41789591 aattctttaaaattt-tcatttacctcgtccaaacacactctaa 41789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 42775855 - 42775780
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42775855 tttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 42775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 2126311 - 2126386
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  2126311 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattaccccatccaaacacactct 2126386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 35470597 - 35470672
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  35470597 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactct 35470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 40547843 - 40547768
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  40547843 tttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaacacactct 40547768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 28751819 - 28751740
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  28751819 tttaattgaatcatttaaattgcctataattctaaattttttaaaatttctcaattatctcatccaaacacactctaagg 28751740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 41139945 - 41140023
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||||||||||| | ||| ||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  41139945 tttaattgaatcatttaaattgcttagaattttaaattctttaaaatttctcaattacttcttccaaacacactctaag 41140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 16516644 - 16516716
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16516644 aattgaatcatttgaattaccaagaattctaaattcttcaaaatttctcaattacctcatccaaacacactct 16516716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 47108693 - 47108765
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacac 107  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  47108693 tttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacctcatccaaacacac 47108765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 30303593 - 30303668
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  30303593 tttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattatctcatccaaacacactct 30303668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 42776561 - 42776630
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacac 107  Q
    |||||||||||||||||| | |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  42776561 aattgaatcatttaaattgcttaggattctaaattctttaaaattttccaattacctcatccaaacacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 46242697 - 46242620
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||| ||||||||||||| | ||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  46242697 tttaattcaatcatttaaattgcttagaattataaattctttaaaatttcccaattacctcatccaaacacactctaa 46242620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 21782445 - 21782521
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||| ||||||||| ||||  |||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21782445 ttttaatggaatcatttgaattgtctagaattctaaattctttaaaatttcacaattacctcatccaaacacactct 21782521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 26534961 - 26535014
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaa 88  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26534961 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 26535014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 24705806 - 24705881
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||||| ||||||||| | |||||||||||||||||    
T  24705806 aattgaatcatttgaattccctaaaattctaaattcttcaaaatttttcaattaccccatccaaacacactctaag 24705881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 31948046 - 31948125
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||| ||  |||||||||||||||||| |||| |||||    
T  31948046 tttaattgaatcatttaaattgcctaaaattttaaattctttaaaagtttccaattacctcgtccaaacgcactgtaagg 31948125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 54566650 - 54566725
Alignment:
Q  38 aattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    ||||||||||||| |||| ||| | ||| ||||||| ||||||||||||||||||| | |||||||||||||||||    
T  54566650 aattgaatcatttgaattcccttgaattttaaattcattaaaatttctcaattaccccatccaaacacactctaag 54566725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 56118244 - 56118165
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 114  Q
    ||||||| ||||||||||||| ||||| ||||| | |||| |||||||| ||||||||||| ||||||||||||| ||||    
T  56118244 tttaattaaatcatttaaattgcctagaattctgagttctctaaaatttgtcaattacctcatccaaacacactcgaagg 56118165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 46242241 - 46242169
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||| || |||||| || ||||||||||||    
T  46242241 tttaattgaatcatttaaattatctagaattctaaattcttcaaaattcct-aattacttcatccaaacacact 46242169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 10633181 - 10633243
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||| ||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||||    
T  10633181 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 10633243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 13318289 - 13318216
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    ||||||||||||||||||||| | ||  || ||||||||||||||||||||||| ||| || |||||||||||||    
T  13318289 tttaattgaatcatttaaattccataaaat-ctaaattctttaaaatttctcaaatacatcatccaaacacactc 13318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 27284295 - 27284221
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactc 109  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||   |||||  || |||||||||||||    
T  27284295 tttaattgaaccatttaaattgcctagaattctaaattctttaaaattttcaaattatatcatccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 16299852 - 16299781
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    |||||||||||||||||||||| |||| ||| |||||||| ||| ||||  |||||||||| | ||||||||    
T  16299852 tttaattgaatcatttaaattaactagaattttaaattctctaatattttccaattacctcattcaaacaca 16299781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 21012491 - 21012437
Alignment:
Q  58 ctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||| ||| ||||||||||||||||| | ||||||||| ||||||||||||||||    
T  21012491 ctagaattttaaattctttaaaatttttaaattacctcatccaaacacactctaa 21012437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 56339549 - 56339598
Alignment:
Q  43 aatcatttaaattacctaggattctaaattctttaaaatttctcaattac 92  Q
    |||||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  56339549 aatcatttgaattacctataattctaaattcttcaaaatttctcaattac 56339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 31474007 - 31474059
Alignment:
Q  58 ctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  31474007 ctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 31474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 29091606 - 29091673
Alignment:
Q  43 aatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||| |||| ||||| |||||||||| || |||||||||||| ||||   ||||||||||||||    
T  29091606 aatcatttgaattccctagaattctaaatttttcaaaatttctcaaataccctatccaaacacactct 29091673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 41983369 - 41983416
Alignment:
Q  63 attctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||||||||||| | | | ||||||||||||    
T  41983369 attctaaattctttaaaatttctcaattatcccattcaaacacactct 41983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 3803731 - 3803777
Alignment:
Q  67 taaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||||||||   ||||||||| |||||||||||||||||    
T  3803731 taaattctttaaaattttcaaattacctcatccaaacacactctaag 3803777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 17727519 - 17727564
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaa 80  Q
    ||||||||||||||||||||||||    ||||||||||||||||||    
T  17727519 tttaattgaatcatttaaattaccctaaattctaaattctttaaaa 17727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 19461341 - 19461266
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattcttt-aaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||| |||||| ||||  ||| |||||||||| |||| |||| ||||||||| | ||||||||||||    
T  19461341 tttaattgaatcatctaaattgcctaaaattttaaattctttaaaaaattct-aattacctcattcaaacacactct 19461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 946854 - 946929
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  946854 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 15467561 - 15467481
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  15467561 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttcttaattacctcatccaaacacactcttagga 15467481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 28632201 - 28632120
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaaggaa 116  Q
    ||||||||||||||||||||| ||||| |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||    
T  28632201 tttaattgaatcatttaaattgcctagaattctaaattttttataatttctcaattatctcatccaaacacactctaaggaa 28632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 37447501 - 37447424
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| || ||||||||||||||||    
T  37447501 tttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaaatacttcatccaaacacactctaa 37447424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 37036579 - 37036499
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagga 115  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  37036579 tttaattgaatcatttgaattacctagaattctaaattcttcaaaatttcttaattaccccatccaaacacactctaagga 37036499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 32128558 - 32128633
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  32128558 tttaattgaatcattaaaattacctaaaattttaaattctttaaaatttctcaattacctcgttcaaacacactct 32128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 44571665 - 44571738
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||    
T  44571665 tttaattgaatcgtttaaattacctaggattctaaattctttataatttcccaattacctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 220626 - 220702
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||| ||||| |||||||||||| || ||||| ||||||||||| ||||||||||||||    
T  220626 ttttaattgaatcatttaaattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactct 220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 6470304 - 6470228
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattcttt-aaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  6470304 tttaattaaatcatttaaattacctagaattctaaattctttaaaaatttctcaattgcctcatccaaacacactct 6470228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 39887540 - 39887618
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  39887540 tttaattgaatcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacacactctaag 39887618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 37446958 - 37446881
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||||||||||||| |||||||||| ||| ||||||||| ||||||||| ||||||| | ||||||||||||||||    
T  37446958 tttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 37446881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 32647767 - 32647827
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  32647767 tttaattgaatcatttaaattttctagaattctaaattctttaaaatttctcaattacctc 32647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 21267421 - 21267346
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||| |||||| ||||  |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  21267421 tttaattgaatcatctaaattgcctataattcgaaattctttaaaatttctcaattatctcatccaaacacactct 21267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 35499523 - 35499598
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||   |||||| || ||||||||||||||    
T  35499523 tttaattgaatcatttaaattatctagaattctaaattctttaaaattttcaaattacttcatccaaacacactct 35499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 8225247 - 8225322
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||| |||||| |||||||||  ||||||||||||| ||||||||||||||||  | ||||||||||||||    
T  8225247 tttaattgattcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacacactct 8225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 41822149 - 41822078
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacac 105  Q
    |||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||| || |||||||||    
T  41822149 ttttaaatgaattatttaaattgcctagaattctaaattctgtaaaatttctcaattacttcatccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 37448038 - 37447968
Alignment:
Q  43 aatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||||| |||| ||||| ||||||||||| | ||||||||||||||||| | |||||||||||||||||    
T  37448038 aatcatttgaattccctagaattctaaattcatcaaaatttctcaattaccccatccaaacacactctaag 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 47541911 - 47541849
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    |||||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  47541911 taaattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaa 47541849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 10166968 - 10167028
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacct 94  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||| ||||||||||    
T  10166968 ttttaattgaatcatttgaattgcctagaattttaaattctttaaaatttatcaattacct 10167028  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 44571152 - 44571224
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacac 107  Q
    |||||||||||||||| |||||||||| ||| ||||||||| |||||||||||| |||  | |||||||||||    
T  44571152 tttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaaatactccatccaaacacac 44571224  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 50472190 - 50472246
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaatta 91  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||    
T  50472190 tttaattgaataatttaaattgcctaaaattctaaattctttaaaatttctcaatta 50472246  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 31166697 - 31166763
Alignment:
Q  46 catttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaa 112  Q
    ||||||||||  ||||  |||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  31166697 catttaaattgactagatttctaaattctttacaatttctcaattacctgatccaaacacactctaa 31166763  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 12293080 - 12293019
Alignment:
Q  52 aattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||| ||||| |||||||||||||| | ||||| |||||||||| |||||||||||||||||    
T  12293080 aattgcctagaattctaaattctttgagatttcccaattacctcatccaaacacactctaag 12293019  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 41822827 - 41822751
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactcta 111  Q
    |||||||||||||||| |||||||||  ||||||||||||| ||||||||| || |||  |  ||||||||||||||    
T  41822827 tttaattgaatcatttgaattacctataattctaaattcttcaaaatttcttaaatactccacccaaacacactcta 41822751  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 31196904 - 31196951
Alignment:
Q  63 attctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  31196904 attctaaattctttaaaatttctcaattatctcatcctaacacactct 31196951  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 48954019 - 48954094
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||| ||  ||||  | ||||||||||| ||||||||||||||| ||| |||||||| |||||    
T  48954019 tttaattgaatcatttagatagcctaaaactctaaattcttcaaaatttctcaattagctcatccaaacatactct 48954094  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 23956054 - 23955981
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||||||||  |||  |||||||||| |||||||||||  |||| |||| |||||| |||||    
T  23956054 tttaattgaatcatttaaattgactaaaattctaaattttttaaaatttcctaattgcctcttccaaatacact 23955981  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 24273127 - 24273084
Alignment:
Q  67 taaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||    
T  24273127 taaattctttaaaatttccaaattacctcatccaaacacactct 24273084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 26501002 - 26500947
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacac 105  Q
    |||||||||||| ||| |||||||||||||||||   ||||||||| |||||||||    
T  26501002 taaattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 32202226 - 32202297
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    ||||||||||||||||||||||| ||  ||||||||   ||| |||||||  ||||| ||||||||||||||    
T  32202226 tttaattgaatcatttaaattacttaaaattctaaaaaatttcaaatttccaaattatctcgtccaaacaca 32202297  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 47165135 - 47165077
Alignment:
Q  50 taaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||  ||| |||||||||||||||||   ||||||||| ||||||||||||    
T  47165135 taaattacctaaaattttaaattctttaaaattttcaaattacctcatccaaacacact 47165077  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 4663784 - 4663859
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||| |||| |||  | ||| ||| ||||||| ||||||||| ||||||||||| |||||||| |||||    
T  4663784 ttttaattgaataatttgaatg-cttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactct 4663859  T

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Target: scaffold0318 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 3331 - 3406
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  3331 tttaattgaatcatttaaattaactaaaattctaaattctttaaaatttctcaattacctcatccaaagacactct 3406  T

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Target: scaffold0301 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 7626 - 7686
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7626 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctc 7686  T

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Target: scaffold0169 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 4492 - 4571
Alignment:
Q  34 ttttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactctaag 113  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  4492 ttttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattagttcatccaaacacactctaag 4571  T

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Target: scaffold0337 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 16012 - 15959
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaa 88  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16012 tttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 15959  T

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Target: scaffold0337; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 15557 - 15501
Alignment:
Q  39 attgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    ||||||||||||||||   |||| ||| |||||||||||||||||| ||||||||||    
T  15557 attgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacctc 15501  T

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Target: scaffold0065 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 3054 - 3001
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaa 88  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  3054 tttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 2599 - 2543
Alignment:
Q  39 attgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctc 95  Q
    ||||||||||||||||   |||| ||| |||||||||||||||||| ||||||||||    
T  2599 attgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacctc 2543  T

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Target: scaffold0417 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 11571 - 11499
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacac 107  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||  ||| |||||| |||||||||||    
T  11571 tttaattaaatcatttaaattacttagaattctaaattctttaaaattttccaaatacctcatccaaacacac 11499  T

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Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 19382 - 19333
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttc 84  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  19382 tttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttc 19333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 49911 - 49838
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacact 108  Q
    |||||||||||||||| | ||||||   ||||||||||||| ||||||||||||||||  | ||||||||||||    
T  49911 tttaattgaatcatttgagttaccttaaattctaaattcttcaaaatttctcaattactccatccaaacacact 49838  T

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Target: scaffold0400 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 4095 - 4020
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| ||| |||||| ||||||||||||| ||||  | |||| |||  | ||||||||||||||    
T  4095 tttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactct 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 4739 - 4664
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacacactct 110  Q
    |||||||||||||||| ||| |||||| ||||||||||||| ||||  | |||| |||  | ||||||||||||||    
T  4739 tttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactct 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 130722 - 130793
Alignment:
Q  35 tttaattgaatcatttaaattacctaggattctaaattctttaaaatttctcaattacctcgtccaaacaca 106  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||  || ||||||| | ||||||||    
T  130722 tttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacctcatacaaacaca 130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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