View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21291_low_4 (Length: 350)
Name: NF21291_low_4
Description: NF21291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21291_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 16 - 334
Target Start/End: Original strand, 35292092 - 35292410
Alignment:
| Q |
16 |
atctaagcatcaaaacaaacatgatcaaaactcaaacacttattattatgtattatttcttagtaactataagcacattaatgcaacattggtgcatata |
115 |
Q |
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| T |
35292092 |
atctaagcatcaaaacaaacatgatcaaaactcaaacacttattattatgtattatttcttagtaactataagcacattaatgcaacattggtgcatata |
35292191 |
T |
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| Q |
116 |
tatgaaaaatagcttatgaattatatatctcatattaaacagtgttgagacttgagatcgtcagggacttctttaaaagtcaaagctgtaatgaccaaaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |
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| T |
35292192 |
tatgaaaaatagcttatgaattatatatctcatattaaacagtgttgagacttgagatcatcagggacttctttgaaagtcaaagctgtaatgaccaaaa |
35292291 |
T |
|
| Q |
216 |
acagcattataatgagagggacgaacataaatatcatcggcggtggttgcaaaggtggaagcaccatcggtagaaccaagagtaatgtggttatcaccac |
315 |
Q |
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||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35292292 |
acaacattataacgagagggacgaacataaatatcatcggcggtggttgcaaaggtggaagcaccatcggtagaaccaagagtaatgtggttatcaccac |
35292391 |
T |
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| Q |
316 |
cataaacaatactgattta |
334 |
Q |
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||||||||||||||||||| |
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| T |
35292392 |
cataaacaatactgattta |
35292410 |
T |
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