View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21292_high_2 (Length: 284)
Name: NF21292_high_2
Description: NF21292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21292_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 42210767 - 42211021
Alignment:
| Q |
13 |
tgagatgaaaataactataaacaatatttttgttatcttataagtattataaagagaaataaataatttgannnnnnncccaaagttttctcccattttt |
112 |
Q |
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| T |
42210767 |
tgagatgaaaataactataaacaatatttttgttatcttagaagtattataaagagaaataaataatttgatttttt-cccaaagttttctcccattttt |
42210865 |
T |
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| Q |
113 |
tgagttctccatatttgagtcttaatccaataaagaaaaataagatctcatgtgaagtgaggatcacacactcttaacttttttagttaatacttccttc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
42210866 |
tgagttctccatatttgagtcttaatccaataaagaaaaataagatctcatgtgaagtgaggatcacacactcttaac-tttttagttaatacttccttc |
42210964 |
T |
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| Q |
213 |
ctatactctcaaaagtattctctctacacactctaaacaaaaactagcaaatatttt |
269 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |
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| T |
42210965 |
ctatactctcaaaagtattctctctacccactctaaacaaaaaatagcaaatatttt |
42211021 |
T |
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