View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21293_high_19 (Length: 281)
Name: NF21293_high_19
Description: NF21293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21293_high_19 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 39 - 281
Target Start/End: Original strand, 53175165 - 53175407
Alignment:
| Q |
39 |
caaacaagtcttaatcacctgagttgaagccattggtagcatcaaacaactcttcataagagaaacatttccaagttggtctttgacaagtttcttcttc |
138 |
Q |
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| T |
53175165 |
caaacaagtcttaatcacctgagttgaagccattggtagcatcaaacaactcttcataagagaaacatttccatgttggtttttgacaagtttcttcttc |
53175264 |
T |
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| Q |
139 |
atatggaagaatcttcaagctcttttcattttcttcacctttgggactcagaactggttcccctaaaccacgtttggtaaatgagaagagcctcttgaag |
238 |
Q |
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| T |
53175265 |
atatggaagaatcttcaagctcttttcattttcttcacctttgggactcagaactggttcccctaaaccacgtttggtaaatgagaagagcctcttgaag |
53175364 |
T |
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| Q |
239 |
ctgcctgttcttatatacctcatcacaatgaatatcaaacaga |
281 |
Q |
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| T |
53175365 |
ctgcctgttcttatatacctcatcacaatgaatatcaaacaga |
53175407 |
T |
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