View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21293_high_33 (Length: 227)
Name: NF21293_high_33
Description: NF21293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21293_high_33 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 53175384 - 53175557
Alignment:
| Q |
13 |
tcatcacaatgaatatcaaacagagtactctgtttcatgcaaaacagaggacaatgaaatagataactctgtgtccgtgtctgtgtttgtgtttgagtct |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
53175384 |
tcatcacaatgaatatcaaacagagtactctgtttcatgcaaaacagaggacaatgaaatagataactctgtgt------ctgtgtttgtgtttgagtct |
53175477 |
T |
|
| Q |
113 |
acaaacatagagacaaagccaagactgtgtttggtttcaaggtgtagcttgaagaagagctgtgtatatttgtaggggtc |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
53175478 |
acaaacatagagacaaagccaagactgtgtttggtttcaaggtgtagcttgaagaagagctgtgtatatgtgtaggggtc |
53175557 |
T |
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