View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21293_low_29 (Length: 253)

Name: NF21293_low_29
Description: NF21293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21293_low_29
NF21293_low_29
[»] chr3 (33 HSPs)
chr3 (116-253)||(34897803-34897940)
chr3 (1-138)||(1995436-1995573)
chr3 (1-121)||(27033643-27033763)
chr3 (53-127)||(52859272-52859346)
chr3 (1-82)||(2229975-2230056)
chr3 (5-121)||(19830394-19830510)
chr3 (1-121)||(43719910-43720030)
chr3 (1-120)||(44637934-44638052)
chr3 (1-123)||(10474400-10474521)
chr3 (1-86)||(31523666-31523751)
chr3 (1-82)||(34373823-34373904)
chr3 (1-121)||(29586328-29586447)
chr3 (1-128)||(48084811-48084939)
chr3 (1-76)||(34373593-34373668)
chr3 (4-87)||(54911649-54911732)
chr3 (1-86)||(33632815-33632899)
chr3 (1-86)||(42613072-42613157)
chr3 (1-86)||(49679268-49679353)
chr3 (1-82)||(46167385-46167466)
chr3 (4-121)||(51982549-51982665)
chr3 (25-121)||(24754673-24754769)
chr3 (25-121)||(24763670-24763766)
chr3 (1-47)||(34897937-34897983)
chr3 (1-86)||(550814-550899)
chr3 (1-78)||(25285843-25285920)
chr3 (9-116)||(47750274-47750380)
chr3 (1-86)||(40810353-40810439)
chr3 (54-123)||(30235416-30235484)
chr3 (16-121)||(40851781-40851886)
chr3 (1-35)||(27959099-27959133)
chr3 (1-34)||(3009231-3009264)
chr3 (1-82)||(12402958-12403039)
chr3 (5-85)||(47914166-47914246)
[»] chr1 (31 HSPs)
chr1 (1-129)||(39426202-39426330)
chr1 (9-130)||(32887735-32887855)
chr1 (1-125)||(26860010-26860133)
chr1 (1-121)||(26372244-26372362)
chr1 (41-127)||(35534741-35534825)
chr1 (1-82)||(12151759-12151840)
chr1 (1-121)||(50294026-50294146)
chr1 (9-86)||(5047379-5047456)
chr1 (1-86)||(30077642-30077727)
chr1 (1-121)||(32618793-32618911)
chr1 (1-121)||(50484378-50484498)
chr1 (8-128)||(18976260-18976381)
chr1 (1-86)||(52280037-52280122)
chr1 (1-87)||(24977232-24977318)
chr1 (25-82)||(7840681-7840738)
chr1 (9-132)||(5854799-5854921)
chr1 (9-75)||(24413291-24413357)
chr1 (1-51)||(46608410-46608460)
chr1 (1-70)||(12380924-12380993)
chr1 (1-70)||(12384991-12385060)
chr1 (1-82)||(48327156-48327236)
chr1 (1-121)||(40328270-40328387)
chr1 (1-51)||(26768887-26768937)
chr1 (1-51)||(44483759-44483809)
chr1 (66-120)||(49384627-49384680)
chr1 (1-50)||(39425970-39426019)
chr1 (64-128)||(1228496-1228560)
chr1 (54-130)||(12380831-12380907)
chr1 (54-130)||(12384898-12384974)
chr1 (29-129)||(27982072-27982171)
chr1 (45-121)||(45978041-45978117)
[»] chr6 (23 HSPs)
chr6 (1-129)||(2800566-2800694)
chr6 (1-129)||(7215807-7215935)
chr6 (1-130)||(4804440-4804569)
chr6 (1-121)||(7162076-7162196)
chr6 (1-121)||(21159332-21159452)
chr6 (1-86)||(24484871-24484956)
chr6 (1-121)||(17944154-17944274)
chr6 (1-79)||(27826530-27826608)
chr6 (1-82)||(12412629-12412710)
chr6 (1-121)||(17828532-17828651)
chr6 (8-119)||(23936252-23936365)
chr6 (5-121)||(227526-227643)
chr6 (1-86)||(2142291-2142376)
chr6 (1-82)||(13089751-13089832)
chr6 (4-86)||(13888520-13888603)
chr6 (1-84)||(32254031-32254114)
chr6 (1-82)||(1249150-1249229)
chr6 (1-62)||(29698155-29698216)
chr6 (86-128)||(9952993-9953035)
chr6 (9-47)||(2720373-2720411)
chr6 (17-86)||(7545645-7545715)
chr6 (40-78)||(9954332-9954370)
chr6 (64-120)||(29229149-29229204)
[»] chr2 (35 HSPs)
chr2 (1-127)||(30709102-30709228)
chr2 (1-128)||(4446852-4446979)
chr2 (6-130)||(19908777-19908899)
chr2 (1-129)||(31618724-31618850)
chr2 (1-121)||(35316817-35316937)
chr2 (53-128)||(30217517-30217592)
chr2 (1-78)||(28564884-28564961)
chr2 (1-121)||(13238673-13238793)
chr2 (1-85)||(21454494-21454577)
chr2 (1-104)||(36929708-36929810)
chr2 (6-104)||(15709765-15709862)
chr2 (1-87)||(34512022-34512108)
chr2 (1-86)||(374985-375070)
chr2 (1-86)||(8988847-8988932)
chr2 (9-125)||(30857638-30857753)
chr2 (1-82)||(23259489-23259570)
chr2 (1-86)||(23459844-23459929)
chr2 (1-86)||(35315286-35315371)
chr2 (1-86)||(38397073-38397158)
chr2 (1-128)||(2063345-2063472)
chr2 (59-129)||(30721564-30721632)
chr2 (1-121)||(36758825-36758944)
chr2 (1-104)||(15722226-15722328)
chr2 (1-128)||(35315494-35315620)
chr2 (55-121)||(22061433-22061498)
chr2 (1-86)||(29188645-29188731)
chr2 (6-79)||(4603114-4603187)
chr2 (17-86)||(19905889-19905958)
chr2 (1-84)||(30803312-30803395)
chr2 (9-87)||(38260294-38260370)
chr2 (1-35)||(3354812-3354846)
chr2 (1-31)||(30217482-30217512)
chr2 (78-127)||(6946335-6946384)
chr2 (6-74)||(26800321-26800389)
chr2 (8-72)||(41072961-41073025)
[»] chr8 (31 HSPs)
chr8 (1-127)||(42761705-42761831)
chr8 (1-86)||(26749546-26749631)
chr8 (1-82)||(30426671-30426752)
chr8 (1-130)||(21360268-21360400)
chr8 (1-104)||(24557162-24557264)
chr8 (1-121)||(28069711-28069831)
chr8 (1-121)||(36991348-36991468)
chr8 (6-104)||(18689488-18689585)
chr8 (1-121)||(6014186-6014307)
chr8 (6-123)||(42338008-42338124)
chr8 (9-84)||(36748492-36748566)
chr8 (1-82)||(40695249-40695330)
chr8 (5-77)||(10672519-10672591)
chr8 (1-128)||(45113262-45113390)
chr8 (1-86)||(1937152-1937238)
chr8 (1-47)||(6148997-6149043)
chr8 (1-130)||(10652571-10652701)
chr8 (8-86)||(17520381-17520459)
chr8 (7-85)||(34612562-34612640)
chr8 (1-62)||(28318924-28318985)
chr8 (1-82)||(41511254-41511335)
chr8 (1-76)||(6399916-6399991)
chr8 (1-131)||(37966397-37966525)
chr8 (1-86)||(3763520-3763605)
chr8 (1-38)||(30796270-30796307)
chr8 (1-62)||(44859189-44859250)
chr8 (66-132)||(20169125-20169190)
chr8 (12-78)||(24102019-24102085)
chr8 (1-42)||(24241567-24241608)
chr8 (11-79)||(21486925-21486993)
chr8 (1-33)||(24241673-24241705)
[»] chr5 (34 HSPs)
chr5 (13-121)||(29340999-29341106)
chr5 (1-121)||(35660572-35660692)
chr5 (1-120)||(4895699-4895818)
chr5 (1-121)||(11775785-11775905)
chr5 (1-121)||(32129580-32129700)
chr5 (1-82)||(14349795-14349876)
chr5 (1-121)||(18625384-18625504)
chr5 (1-121)||(37266723-37266843)
chr5 (1-86)||(10362012-10362097)
chr5 (1-86)||(36290594-36290679)
chr5 (1-82)||(40753164-40753245)
chr5 (9-121)||(43309108-43309220)
chr5 (1-104)||(34827184-34827287)
chr5 (1-119)||(39902407-39902525)
chr5 (1-85)||(2984389-2984473)
chr5 (1-121)||(13032110-13032230)
chr5 (6-86)||(31653032-31653112)
chr5 (1-86)||(3057152-3057237)
chr5 (1-86)||(18653353-18653438)
chr5 (3-86)||(41660100-41660183)
chr5 (1-67)||(4592792-4592858)
chr5 (1-78)||(14688566-14688643)
chr5 (9-85)||(31279914-31279990)
chr5 (1-128)||(3057408-3057534)
chr5 (9-76)||(43222126-43222193)
chr5 (57-123)||(9460597-9460662)
chr5 (16-86)||(27428879-27428949)
chr5 (1-47)||(28142812-28142858)
chr5 (1-86)||(31546478-31546563)
chr5 (1-85)||(17247398-17247482)
chr5 (8-87)||(38283776-38283855)
chr5 (1-51)||(3041341-3041391)
chr5 (94-128)||(21213953-21213987)
chr5 (1-74)||(8440981-8441054)
[»] chr4 (47 HSPs)
chr4 (1-121)||(19901881-19902001)
chr4 (1-126)||(36532618-36532741)
chr4 (1-121)||(5416429-5416548)
chr4 (1-121)||(23610634-23610754)
chr4 (1-128)||(56453777-56453903)
chr4 (1-130)||(56558271-56558400)
chr4 (1-124)||(42844148-42844270)
chr4 (1-87)||(5763159-5763245)
chr4 (9-125)||(1871277-1871392)
chr4 (1-121)||(3952133-3952253)
chr4 (1-121)||(34778413-34778533)
chr4 (7-86)||(56269074-56269153)
chr4 (1-86)||(5524439-5524524)
chr4 (1-120)||(5815267-5815383)
chr4 (6-86)||(48914516-48914596)
chr4 (8-129)||(15178628-15178738)
chr4 (1-126)||(47922324-47922450)
chr4 (1-86)||(23474103-23474188)
chr4 (1-78)||(30567893-30567970)
chr4 (5-121)||(18207003-18207119)
chr4 (1-121)||(39862509-39862629)
chr4 (12-82)||(24073619-24073689)
chr4 (1-79)||(33262557-33262635)
chr4 (8-86)||(36688186-36688264)
chr4 (1-86)||(37002249-37002334)
chr4 (1-86)||(42010109-42010194)
chr4 (2-121)||(12312438-12312558)
chr4 (1-121)||(33247093-33247213)
chr4 (1-49)||(46804623-46804671)
chr4 (7-86)||(1015852-1015931)
chr4 (11-86)||(50483554-50483629)
chr4 (1-51)||(12241441-12241491)
chr4 (1-47)||(31862257-31862303)
chr4 (1-79)||(38079725-38079803)
chr4 (13-123)||(13493276-13493387)
chr4 (58-123)||(33841766-33841830)
chr4 (1-84)||(37337091-37337174)
chr4 (1-51)||(48084558-48084608)
chr4 (1-127)||(4404282-4404409)
chr4 (1-52)||(3326509-3326560)
chr4 (8-78)||(34927484-34927555)
chr4 (1-35)||(5361435-5361469)
chr4 (1-35)||(47834573-47834607)
chr4 (50-87)||(5817976-5818013)
chr4 (30-115)||(36003216-36003300)
chr4 (7-51)||(17080811-17080855)
chr4 (7-39)||(52552772-52552804)
[»] chr7 (37 HSPs)
chr7 (6-121)||(4888464-4888579)
chr7 (1-86)||(47799898-47799983)
chr7 (7-126)||(40023215-40023333)
chr7 (1-82)||(12139318-12139400)
chr7 (1-82)||(25084730-25084811)
chr7 (1-129)||(33450498-33450627)
chr7 (39-128)||(47270580-47270668)
chr7 (1-121)||(9559017-9559137)
chr7 (1-128)||(39855770-39855896)
chr7 (1-117)||(7362560-7362676)
chr7 (1-121)||(7712331-7712450)
chr7 (1-121)||(16366510-16366630)
chr7 (1-121)||(21151144-21151264)
chr7 (9-120)||(989129-989239)
chr7 (7-86)||(32915954-32916033)
chr7 (1-130)||(47500236-47500366)
chr7 (5-86)||(8149605-8149686)
chr7 (1-86)||(30588527-30588612)
chr7 (1-82)||(45260429-45260510)
chr7 (1-120)||(29631040-29631156)
chr7 (34-90)||(29844316-29844372)
chr7 (9-128)||(7373867-7373985)
chr7 (1-84)||(24193585-24193668)
chr7 (1-116)||(38365647-38365761)
chr7 (5-121)||(44647958-44648076)
chr7 (1-130)||(18198248-18198377)
chr7 (1-86)||(19889032-19889117)
chr7 (1-121)||(47226039-47226157)
chr7 (1-48)||(11828945-11828992)
chr7 (9-84)||(46802331-46802406)
chr7 (1-86)||(34985943-34986029)
chr7 (53-121)||(5463867-5463934)
chr7 (17-87)||(19027680-19027751)
chr7 (17-87)||(20726885-20726956)
chr7 (9-123)||(30153144-30153257)
chr7 (66-132)||(44390835-44390900)
chr7 (42-99)||(18064588-18064643)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-121)||(208055-208175)
[»] scaffold0062 (2 HSPs)
scaffold0062 (6-104)||(58677-58774)
scaffold0062 (1-104)||(70783-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-82)||(7139-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-86)||(29567-29652)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-79)||(17311-17389)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-82)||(16399-16480)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-76)||(22450-22525)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-82)||(9203-9273)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-82)||(6437-6518)


Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 116 - 253
Target Start/End: Complemental strand, 34897940 - 34897803
Alignment:
Q  116 aggatcctaacccctctcacccacctctattacatgttgacttggattccaacaaattctccaaaaacaaaacagtttttacaatgatattttctatttg 215  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897940 aggatcctaacccctctcacccacctcaattacatgttgacttggattccgacaaattctccaaaaacaaaacagtttttacaatgatattttctatttg 34897841  T
Q  216 tatcaaaattatagttctaccgaacaaaacggtattga 253  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34897840 tatcaaaattatagttctaccgaacaaaacggtattga 34897803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1995436 - 1995573
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  1995436 aaaagtaaaaaataattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctctcttcaaattgtgtacttccattta 1995535  T
Q  101 ttttatcaaatgaagaggatcctaacccctctcaccca 138  Q
    ||| || ||||||||||||||||||||| | |||||||    
T  1995536 tttgataaaatgaagaggatcctaacccatgtcaccca 1995573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27033643 - 27033763
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||| ||||||| ||||||||||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||    
T  27033643 aaaagtaaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccattta 27033742  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||||||||||| ||| ||||    
T  27033743 ttttatcaaatggagatgatc 27033763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 52859272 - 52859346
Alignment:
Q  53 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 127  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |||||||| |||||    
T  52859272 tatctattttatgtgtctatctctctctaaattgtgtattttcatttattttatcaaatggagaggatcataacc 52859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2229975 - 2230056
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||| | ||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  2229975 aaaagtaaaatataattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaa 2230056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 19830510 - 19830394
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 104  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||| |||| |||| |||   |  ||||||||||||    
T  19830510 gtaaaatataattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttatttt 19830411  T
Q  105 atcaaatgaagaggatc 121  Q
      |||||| ||||||||    
T  19830410 gccaaatggagaggatc 19830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43720030 - 43719910
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||||||||||| |||   |  ||||||||    
T  43720030 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccattta 43719931  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||| | ||||| ||||||||    
T  43719930 ttttgttaaatggagaggatc 43719910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44637934 - 44638052
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||||||| |||||| ||| ||||| ||||||| |||||  ||| |||||||||||||||| |||||||||| ||||||  ||| ||||||||    
T  44637934 aaaaataaaaaataactaatgacagtaggacctacttaatagtagggtccactatctattttatgtgtttatctctctcaaaattgcatac-tccattta 44638032  T
Q  101 ttttatcaaatgaagaggat 120  Q
    |||| |||||||| ||||||    
T  44638033 ttttgtcaaatgatgaggat 44638052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 10474521 - 10474400
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||| ||||||||| | |||| || |||||||| |||||| |||||||||||||||||||||||| |||||| ||||||  ||| ||||||||    
T  10474521 aaaactaaaaagtaattaatgttggtggaactcacttaatagtaggatccattatctattttatgtgtctatatctctcaaaattgcatac-tccattta 10474423  T
Q  101 ttttatcaaatgaagaggatcct 123  Q
    || | ||||||  ||||||||||    
T  10474422 ttatgtcaaatagagaggatcct 10474400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31523751 - 31523666
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||||    
T  31523751 aaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattg 31523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34373823 - 34373904
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||| | ||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  34373823 aaaagtaaaatataattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaa 34373904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29586328 - 29586447
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||| ||||||||||| ||| |||||||||||| ||| |||  | ||||||||||||||||||||||||||||||| ||  ||| ||||||||    
T  29586328 aaaactaaaaagtaattaatgatggtgagacccacttaatagtaagacttactatctattttatgtgtctatctctctccaaactgcatac-tccattta 29586426  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    || |   ||||||||||||||    
T  29586427 ttatgctaaatgaagaggatc 29586447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 48084811 - 48084939
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    |||| ||||||||||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||| ||||||||   |  || ||||    
T  48084811 aaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaattt 48084910  T
Q  100 attttatcaaatgaagaggatcctaaccc 128  Q
    |||||| |||||| |||||||| ||||||    
T  48084911 attttagcaaatggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34373668 - 34373593
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 76  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||||||||    
T  34373668 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctatttttagtgtctatctct 34373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 54911649 - 54911732
Alignment:
Q  4 agtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||| ||||||||||| |||| || || |||||||||||||||| || ||||||||||| ||||||||||| ||||||||    
T  54911649 agtaaaaattaattaatgatggtggaactcatttaatggtaggacccactacctattttatgtctctatctctcttcaaattgt 54911732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33632815 - 33632899
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| ||||||||||| |||| | ||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  33632815 aaaactaaaaagtaattaatgat-gtggaatccatttaatagtaggatccactatctattttatgtgtctatctctctccaaattg 33632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42613072 - 42613157
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||  |  |||||| | ||||||||||||| |||||||    
T  42613072 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattg 42613157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49679353 - 49679268
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||||    
T  49679353 aaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattg 49679268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46167385 - 46167466
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| ||||||||| || || ||| ||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  46167385 aaaagtaaaatataattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaa 46167466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 51982665 - 51982549
Alignment:
Q  4 agtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattt 103  Q
    |||||||| |||||||||||  | | || ||||||||| ||| ||||| || ||||||||||| |||||||||||||||||||  | |||||||||||||    
T  51982665 agtaaaaagtaattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaattgcat-cttccatttattt 51982567  T
Q  104 tatcaaatgaagaggatc 121  Q
    |   ||||| ||||||||    
T  51982566 ttataaatggagaggatc 51982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 24754673 - 24754769
Alignment:
Q  25 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 121  Q
    |||||||||||||| |||||||||  |  ||||||||| ||||||||||||||||||| ||||  |  ||||||||||||  |||||| ||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 24763670 - 24763766
Alignment:
Q  25 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 121  Q
    |||||||||||||| |||||||||  |  ||||||||| ||||||||||||||||||| ||||  |  ||||||||||||  |||||| ||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34897983 - 34897937
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtagga 47  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  34897983 aaaagtaaaaaataattaatgatagtggaacccatttaatggtagga 34897937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 550899 - 550814
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||| |||| |||| || ||||||||||||||||| ||||| |||  ||||||||| ||| | ||||| |||||||||||    
T  550899 aaaagtaaaatataaataataatggtgggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattg 550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25285920 - 25285843
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||||| ||||| |||| ||||| ||||| | || |||||| ||||| ||| ||||||||||||||||||||||||||    
T  25285920 aaaagtcaaaaaaaattgatgatggtgggtctcatttaatgataggatccactatctattttatgtgtctatctctct 25285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 47750380 - 47750274
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||||| ||||| || || |||| ||||||||| || ||| | ||||||||||| ||||| ||| ||||| |||||||| ||| | |||||||||| |||    
T  47750380 aaaatatttaataatggtaggactcacttaatgataagactctttatctattttttgtgtttatgtctcttcaaattgtatacct-catttattttgtca 47750282  T
Q  109 aatgaaga 116  Q
    ||||||||    
T  47750281 aatgaaga 47750274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40810439 - 40810353
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattg 86  Q
    |||| ||||||||||||||||||  ||||||||||||| ||||  ||||||  ||||||| || | ||| |||||||||||||||||    
T  40810439 aaaaataaaaaataattaatgatgatgggacccacttagtggttagacccaccatctattcttttttgtttatctctctccaaattg 40810353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 30235484 - 30235416
Alignment:
Q  54 atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 123  Q
    ||||||||| | ||||||||||||| |||||||  |||| |||||||||||| |||||||||| ||||||    
T  30235484 atctattttttatgtctatctctcttcaaattgcatact-ccatttattttaacaaatgaagatgatcct 30235416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 40851781 - 40851886
Alignment:
Q  16 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaag 115  Q
    |||||||| || ||||||||||| |||| | |||||  ||||||||| ||||||||||| ||||||| |||   |  |||||||||||| ||||||  ||    
T  40851781 ttaatgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgag 40851880  T
Q  116 aggatc 121  Q
    ||||||    
T  40851881 aggatc 40851886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27959099 - 27959133
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  27959099 aaaagtaaaaaataattaatgatggtgggacccac 27959133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3009231 - 3009264
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggaccca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  3009231 aaaagtaaaaaataattaatgatggtgggaccca 3009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12402958 - 12403039
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| ||||||||| || ||||||| |||||| |||||| | |||  ||||| ||| | | |||||||||||||||    
T  12402958 aaaagtaaaatataattaataatggtgggactcacttagtggtagaatccaccatctaatttttatatctatctctctccaa 12403039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 47914246 - 47914166
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    ||||||| ||||||||||| ||||||| ||||||||  ||||| | | || ||||||||||| | |||| ||||| |||||    
T  47914246 gtaaaaagtaattaatgatggtgggactcacttaataataggatctactacctattttatgtctatatcactctctaaatt 47914166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39426202 - 39426330
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39426202 aaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccattta 39426301  T
Q  101 ttttatcaaatgaagaggatcctaacccc 129  Q
    |||||||||||| ||| ||| ||||||||    
T  39426302 ttttatcaaatggagatgatactaacccc 39426330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 32887855 - 32887735
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    ||||||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  32887855 aaaataattaatgatggtgggacccatttaatggtaggatccactatttattttatgtgtctatctttctctaaactgtgtac-tccatttattttatca 32887757  T
Q  109 aatgaagaggatcctaacccct 130  Q
    ||||||||||||||||| ||||    
T  32887756 aatgaagaggatcctaatccct 32887735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26860133 - 26860010
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||||| |||||| ||||||| || ||||||| | |||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  26860133 aaaagtaaaaaataattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctcttcaaattatgtac-tccattta 26860035  T
Q  101 ttttatcaaatgaagaggatcctaa 125  Q
    |||||||||||  ||| ||||||||    
T  26860034 ttttatcaaatagagatgatcctaa 26860010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26372244 - 26372362
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||  ||||| | ||||||||||||    
T  26372244 aaaagtaaaaaataattaatggtggtgggacccacttaatggtaggatctattgtctattttacgtgtctatctctct--aaattatctacttccattta 26372341  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||||||||||  ||||||||    
T  26372342 ttttatcaaattgagaggatc 26372362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 35534825 - 35534741
Alignment:
Q  41 ggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 127  Q
    ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  35534825 ggtaggatccactatctattttatgtgtctatctctct--aaattgtgtacttccatttattttatcaaatggagaggatactaacc 35534741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12151759 - 12151840
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  12151759 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaa 12151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 50294146 - 50294026
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| || ||| ||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  50294146 aaaaataaaatataattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccattta 50294047  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||||||||||||    
T  50294046 ttttgccaaatgaagaggatc 50294026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 5047456 - 5047379
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||  || ||||||||||||||||    
T  5047456 aaaataattaatgatggtgggacccacatagtggtaggatccattatctattttatgcatcaatctctctccaaattg 5047379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30077727 - 30077642
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||||||||||| |||||| || ||| |||||  |  |||||| |||||||||||||||||||||||    
T  30077727 aaaagtaaaaaataattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattg 30077642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32618793 - 32618911
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||| ||||||||||| |||||||| ||||||| |||||| ||| |||||| ||||| |||| ||||||||||||||||  ||| ||||||||    
T  32618793 aaaactaaaaagtaattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaattggatac-tccattta 32618890  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    || |  |||||||||||||||    
T  32618891 ttatgccaaatgaagaggatc 32618911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50484378 - 50484498
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||  |||||||||||||| |||| | |||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  50484378 aaaagtaaaatataattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 50484477  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  50484478 ttttgccaaatggagaggatc 50484498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 18976381 - 18976260
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattttat 106  Q
    ||||||||||||||||  ||||||| |||||||||| ||| |||  ||||||| || |||||||||||||||||||||||   |  || ||||||||||     
T  18976381 aaaaataattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttag 18976282  T
Q  107 caaatgaagaggatcctaaccc 128  Q
    |||||| |||||||| ||||||    
T  18976281 caaatggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52280122 - 52280037
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||| ||||||| || |||||||||  |  |||||| | |||||||||||||||||||||    
T  52280122 aaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattg 52280037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24977232 - 24977318
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||| ||||| |||| ||||||| |||| ||||||||| |||||||| |||  ||||||||| |||||||||||||||| |||||||    
T  24977232 aaaaataaaatataactaatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctatctctctctaaattgt 24977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 7840738 - 7840681
Alignment:
Q  25 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  7840738 gtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaa 7840681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 5854921 - 5854799
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||||||||||||||  ||||| ||| || ||||||||| ||| | || | ||| | ||||||||||| | |||||||| ||| |||||||||| | |||    
T  5854921 aaaataattaatgatgatgggatccattttatggtaggatccactctcaaatttttatgtctatctcttttcaaattgtatac-tccatttattctttca 5854823  T
Q  109 aatgaagaggatcctaacccctct 132  Q
    |||| |||||||| ||||||||||    
T  5854822 aatgtagaggatcataacccctct 5854799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 24413357 - 24413291
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctc 75  Q
    ||||||||||||||| |||||||||| |||||| |||||||||  ||| ||||| ||||||||||||    
T  24413357 aaaataattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46608460 - 46608410
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  46608460 aaaagtaaaaaataattaatgatggtgggtcccacttagtggtaggaccca 46608410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12380993 - 12380924
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 70  Q
    |||||||||| |||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12380993 aaaagtaaaatataattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12385060 - 12384991
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 70  Q
    |||||||||| |||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12385060 aaaagtaaaatataattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48327236 - 48327156
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||| ||||| |||||||||||| |||| ||||||||| ||||||||| ||  ||||||||| | |||||||||||||||||    
T  48327236 aaaaataaaatataattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaa 48327156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 40328270 - 40328387
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||| |||||||  ||||||||| ||||||||||||||  ||| |||   |  ||||||||    
T  40328270 aaaagtaaaatataactaatgatggtggaacccacttagtggtgggacccaccatctatttt-tgtgtctatctctc--caatttgcaaaactccattta 40328366  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  40328367 ttttgccaaatggagaggatc 40328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26768887 - 26768937
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    ||||||||||||||||||||||| ||| ||| ||||||||| ||| |||||    
T  26768887 aaaagtaaaaaataattaatgatggtgagactcacttaatgatagaaccca 26768937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44483759 - 44483809
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    |||| |||||||||||||||||| |||| | ||| ||||||||||||||||    
T  44483759 aaaaataaaaaataattaatgatggtggaatccatttaatggtaggaccca 44483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 49384680 - 49384627
Alignment:
Q  66 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggat 120  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||| |||||||    
T  49384680 tgtctatctctctctaaattgtata-ttccatttattttaacaaatggagaggat 49384627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39425970 - 39426019
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccc 50  Q
    ||||| |||||| |||||||||||| | |||||||| |||||||||||||    
T  39425970 aaaagaaaaaaaaaattaatgatagcgagacccactcaatggtaggaccc 39426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 1228560 - 1228496
Alignment:
Q  64 tgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 128  Q
    ||||||| |||||||||||||||   |  |||||||||||||  |||||||||||||| ||||||    
T  1228560 tgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatcttaaccc 1228496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 12380907 - 12380831
Alignment:
Q  54 atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccct 130  Q
    ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  |||||| |||||||| | ||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccct 12380831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 12384974 - 12384898
Alignment:
Q  54 atctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccct 130  Q
    ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  |||||| |||||||| | ||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccct 12384898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 27982072 - 27982171
Alignment:
Q  29 gacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 128  Q
    |||||| |||||| | |||||||  || |||||| | ||||||| |||||||||||||  | ||||||||||||||   ||||| |||||||| ||||||    
T  27982072 gacccatttaatgatgggacccaacatatattttttatgtctatatctctccaaattgcat-cttccatttatttttataaatggagaggatcttaaccc 27982170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 45978041 - 45978117
Alignment:
Q  45 ggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 121  Q
    |||||||  ||||||||| ||| ||||||||||||||| |||   |  |||||||||||||||||||  ||||||||    
T  45978041 ggacccaccatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatc 45978117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 9e-48; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2800694 - 2800566
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||||||| |    
T  2800694 aaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattgtgtatttccattaa 2800595  T
Q  101 ttttatcaaatgaagaggatcctaacccc 129  Q
    |||||||||||| ||||||||||||||||    
T  2800594 ttttatcaaatggagaggatcctaacccc 2800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7215935 - 7215807
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||  |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  7215935 aaaagtaaaacgtaattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccattta 7215836  T
Q  101 ttttatcaaatgaagaggatcctaacccc 129  Q
    |||||||||||| ||||||| ||||||||    
T  7215835 ttttatcaaatggagaggatactaacccc 7215807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4804440 - 4804569
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||||  |  ||||||||    
T  4804440 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccattta 4804539  T
Q  101 ttttatcaaatgaagaggatcctaacccct 130  Q
    ||||  |||||| |||||||| | ||||||    
T  4804540 ttttgccaaatggagaggatcttcacccct 4804569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7162076 - 7162196
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| | ||||||||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||    
T  7162076 aaaagtaaaatataattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccattta 7162175  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||||||||||| ||| ||||    
T  7162176 ttttatcaaatggagatgatc 7162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21159452 - 21159332
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||| ||||||||| |||   |  | ||||||    
T  21159452 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcattta 21159353  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||| |||||| ||||||||    
T  21159352 ttttaacaaatggagaggatc 21159332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24484871 - 24484956
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||  |  |||||| |||||||||||||||||||||||    
T  24484871 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattg 24484956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17944154 - 17944274
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||| ||| |||||||||| |  ||||||||| ||||||||||||||||||| ||    |  ||||||||    
T  17944154 aaaagtaaaatataattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaacttacaaaactccattta 17944253  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||||||||||||    
T  17944254 ttttgccaaatgaagaggatc 17944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27826530 - 27826608
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||    
T  27826530 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctc 27826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12412629 - 12412710
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||| ||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  12412629 aaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaa 12412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17828651 - 17828532
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||| |||||| ||||  ||||| ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||  ||| |||| |||    
T  17828651 aaaactaaaaattaattattgatgatgggatccacttaatagtagaatccactatctattttatgtgtctatctctctccaaattgcatac-tccaatta 17828553  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    || || |||||| ||||||||    
T  17828552 ttataccaaatgtagaggatc 17828532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 23936252 - 23936365
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtcta--tctctctccaaattgtgtacttccatttatttta 105  Q
    ||||||||| || ||| ||||||||||||||||||||| | ||  |||| || |||||||||||  ||||||||| |||||||||||| |||| | ||||    
T  23936252 aaaaataatcaaggatggtgggacccacttaatggtagaatccgctatccatcttatgtgtctatctctctctccgaattgtgtactttcattcaattta 23936351  T
Q  106 tcaaatgaagagga 119  Q
    ||||||| ||||||    
T  23936352 tcaaatggagagga 23936365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 227643 - 227526
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccatttattt 103  Q
    |||||||||||| ||||||  ||||| ||||||| ||||||||||||  ||||||| || |||||||||||||||||||| ||   |  |||||||||||    
T  227643 gtaaaaaataatcaatgatgatgggatccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattt 227544  T
Q  104 tatcaaatgaagaggatc 121  Q
    || |||||| ||||||||    
T  227543 tagcaaatggagaggatc 227526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2142376 - 2142291
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||| |||||| ||||| | |||||||  |  |||||| |||||||||||||||||||||||    
T  2142376 aaaagtaaaaaataattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattg 2142291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13089832 - 13089751
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||| ||||| |||||||||||| ||||| |||||||| ||||||||||||  |||||| || |||||||||||||||||||    
T  13089832 aaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaa 13089751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 13888603 - 13888520
Alignment:
Q  4 agtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||  ||||||||| |||||||||||| |||  ||||||| || ||||| |||||||||||||||||    
T  13888603 agtaaaaaataattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattg 13888520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32254114 - 32254031
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||||||||  | || |||| | |||||||||| ||||||||    
T  32254114 aaaaataaaaaataattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaaat 32254031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1249229 - 1249150
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||  | ||||| |||||||||||    
T  1249229 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattt--tttgtctgtctctctccaa 1249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29698155 - 29698216
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatttt 62  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| |||  |||||||||    
T  29698155 aaaagtaaaatataattaatgatggtgggacccacttaatggtaggatccaccatctatttt 29698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 9953035 - 9952993
Alignment:
Q  86 gtgtacttccatttattttatcaaatgaagaggatcctaaccc 128  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  9953035 gtgtacttccatttattttatcaaatggagaggatcttaaccc 9952993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 2720373 - 2720411
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtagga 47  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  2720373 aaaataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 7545645 - 7545715
Alignment:
Q  17 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattg 86  Q
    |||||||||||||| ||||||| || |||||||||  |  |||||| | ||||||||||||||||||||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattg 7545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 9954370 - 9954332
Alignment:
Q  40 tggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  9954370 tggtgggacccactatctattttatgtgtctatctctct 9954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 29229149 - 29229204
Alignment:
Q  64 tgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggat 120  Q
    |||||||||||||||||||||||  ||| |||||||||| || |||||| |||||||    
T  29229149 tgtgtctatctctctccaaattgcatac-tccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30709102 - 30709228
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |    
T  30709102 aaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaaattgtgtactttcattga 30709201  T
Q  101 ttttatcaaatgaagaggatcctaacc 127  Q
    |||||| | ||| ||||||||||||||    
T  30709202 ttttataagatggagaggatcctaacc 30709228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4446979 - 4446852
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||||||||||||||||  ||||| ||| |||||||| ||| |||||||||||||||||||||||||| ||||||||  |||||||||||    
T  4446979 aaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccattta 4446880  T
Q  101 ttttatcaaatgaagaggatcctaaccc 128  Q
    |||||||||||| ||||||| |||||||    
T  4446879 ttttatcaaatggagaggatactaaccc 4446852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 19908777 - 19908899
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttta 105  Q
    |||||||||||||||||| |||||||||||||||  ||||||| || ||||||||||||||||||||||| ||||||||||  ||| |||||||||| ||    
T  19908777 taaaaaataattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcatac-tccatttattata 19908874  T
Q  106 tcaaatgaagaggatcctaacccct 130  Q
    |||||||||||||||| | ||||||    
T  19908875 tcaaatgaagaggatctttacccct 19908899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31618850 - 31618724
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||| || ||| || |||||||||||| | ||||||| |||||||||||| ||| |||||||     
T  31618850 aaaagtaaaaaataattaatgattgtgggactcacttaatgatatgactcactatctattttatatatctatctttctccaaattgtatac-tccattt- 31618753  T
Q  101 ttttatcaaatgaagaggatcctaacccc 129  Q
     ||||||||||| ||||||||||||||||    
T  31618752 ctttatcaaatggagaggatcctaacccc 31618724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 35316817 - 35316937
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  35316817 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 35316916  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  35316917 ttttgccaaatggagaggatc 35316937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 30217517 - 30217592
Alignment:
Q  53 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 128  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||  |||||||||||||||    
T  30217517 tatctattttatgtgtctatctcactctaaattgtgtgcttccatttattttatcaaatagagaggatcctaaccc 30217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28564884 - 28564961
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  28564884 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctct 28564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13238673 - 13238793
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||  ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  13238673 aaaaataaaatataattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccattta 13238772  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  13238773 ttttgccaaatggagaggatc 13238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21454577 - 21454494
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||||||  ||||||||| |||||||||||||||| |||||    
T  21454577 aaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatctatttt-tgtgtctatctctctctaaatt 21454494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36929708 - 36929810
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||| ||||||||||| | || | ||| ||||||||||||| || || |||||||||||||||||||||||||||||||  ||| ||||||||    
T  36929708 aaaagtaaaaagtaattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaattgcatac-tccattta 36929806  T
Q  101 tttt 104  Q
    ||||    
T  36929807 tttt 36929810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 15709765 - 15709862
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 104  Q
    |||||| |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  15709765 taaaaagtaattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 15709862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34512108 - 34512022
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||||||| |||||||||| ||| |||| ||||||| |||  ||||| |||||||||||||||||||||| ||||||||||||    
T  34512108 aaaagtaaaaaacaattaatgattgtgagacctacttaatagtataacccactatctattttatgtgtctatctttctccaaattgt 34512022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 374985 - 375070
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||||    
T  374985 aaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattg 375070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8988847 - 8988932
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||||||||||||||| |||||||||||||| || ||||||| || |  |||||| |||||||||||||||||||||||    
T  8988847 aaaaataaaaaataattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattg 8988932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 30857753 - 30857638
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    ||||||||||||||| ||| || ||| ||||| |||||| |||||||||||||| |||||||| |||||| ||||||   ||| |||||||||||| | |    
T  30857753 aaaataattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaattacatac-tccatttattttgtga 30857655  T
Q  109 aatgaagaggatcctaa 125  Q
    |||| ||||||||||||    
T  30857654 aatggagaggatcctaa 30857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23259570 - 23259489
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||| ||||||| | ||||||||||  | ||||||| |||||||||||||||||||    
T  23259570 aaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaa 23259489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23459929 - 23459844
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||||    
T  23459929 aaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattg 23459844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35315371 - 35315286
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| |||||||| || ||||||| || ||||| ||| || |||||||||||||||||||||||||||||| |||||||    
T  35315371 aaaattaaaaagtaattaataatggtgggactcaattaatagtaagatccattatctattttatgtgtctatctctcttcaaattg 35315286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38397073 - 38397158
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| |||||| |||| ||||||| |||||||| |||| ||||| |||||||||||| ||||||||||||| |||||||    
T  38397073 aaaactaaaaagtaattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattg 38397158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2063345 - 2063472
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccatt-atctattttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    ||||||| || || ||||||||| |||| ||||||||  |||||||||| |   ||||||||| |||||||||||||||||||||||   || || ||||    
T  2063345 aaaagtataatattattaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaac-tctattt 2063443  T
Q  100 attttatcaaatgaagaggatcctaaccc 128  Q
    ||||| |||||||||||||||| ||||||    
T  2063444 attttgtcaaatgaagaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 30721632 - 30721564
Alignment:
Q  59 ttttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccc 129  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||| || ||||| |||||||    
T  30721632 ttttatgtgtctatctctc--caaattgtgtacttctatttattttatcaaatggagcggatcttaacccc 30721564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 36758944 - 36758825
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||||| |||| |||||| ||| | ||||| |||  |  || ||| |||||||||||||||||||||||   |||||||||||    
T  36758944 aaaagtaaaaaataattaatgattgtggaacccacctaaagataggatccaccacttactttttgtgtctatctctctccaaattg-caacttccattta 36758846  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||   ||||| ||||||||    
T  36758845 tttttataaatggagaggatc 36758825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15722226 - 15722328
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||  |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||||  || |||||||||    
T  15722226 aaaagtaaaaaggaattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcata-ttccattta 15722324  T
Q  101 tttt 104  Q
    ||||    
T  15722325 tttt 15722328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35315494 - 35315620
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||| |||| ||| |  |||| ||||||||| |||||||||  | ||||| | ||||| |||||||||||||||||  | ||||||||||    
T  35315494 aaaagtaaaaaatagttaacgatggaaggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcat-cttccattta 35315592  T
Q  101 ttttatcaaatgaagaggatcctaaccc 128  Q
    ||||   ||||| |||||||| ||||||    
T  35315593 tttttataaatggagaggatcttaaccc 35315620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 22061498 - 22061433
Alignment:
Q  55 tctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 121  Q
    |||||||||||||||||||||||| |||||||  ||||| |||||||||| ||||||  ||||||||    
T  22061498 tctattttatgtgtctatctctcttcaaattgcatactt-catttattttgtcaaattgagaggatc 22061433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29188645 - 29188731
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccatta-tctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| ||||||||| |||| || |||||| ||  | |   |||| |||||||||||||||||||||||    
T  29188645 aaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacgcaccacttgtttttttgtgtctatctctctccaaattg 29188731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 4603187 - 4603114
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    ||||| |||||||||||| ||||||||||  ||||||||| || |||||| |||| | | ||||||||||||||    
T  4603187 taaaatataattaatgatggtgggacccatctaatggtagaactcattatatattgtctatgtctatctctctc 4603114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 19905889 - 19905958
Alignment:
Q  17 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||| ||||||| ||||||||  || | ||||  |||||||||||||||||||||||||| ||||||    
T  19905889 taatgatggtgggactcacttaataatatgtcccaccatctattttatgtgtctatctctctcaaaattg 19905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30803312 - 30803395
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    |||||| ||||| |||||||||| |||||| ||||||| || |||||  | || ||||||||| | |||||||||||| |||||    
T  30803312 aaaagtgaaaaacaattaatgatggtgggatccacttactgataggattcgttgtctattttaggcgtctatctctctacaaat 30803395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 38260294 - 38260370
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||||||||||  |||||  |||||||||||| ||||||   |||||||| | || |||||||||||||||||||    
T  38260294 aaaataattaatgattatgggattcacttaatggtaagaccca--ctctattttttttggctatctctctccaaattgt 38260370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 3354846 - 3354812
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  3354846 aaaagtaaaaaataattaatgatggtgggacccac 3354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 30217482 - 30217512
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggac 31  Q
    |||||||||||||||||||||||||||||||    
T  30217482 aaaagtaaaaaataattaatgatagtgggac 30217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 6946335 - 6946384
Alignment:
Q  78 tccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacc 127  Q
    ||||||||||| | || ||||||||||||||||||  |||||||||||||    
T  6946335 tccaaattgtgcattttcatttattttatcaaatggggaggatcctaacc 6946384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 26800321 - 26800389
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatct 74  Q
    ||||||||||||||||||   | ||| || ||||| | |||||| |||||||||||||||||| |||||    
T  26800321 taaaaaataattaatgatgacgtgactcatttaatagcaggacctattatctattttatgtgtttatct 26800389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 41073025 - 41072961
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctat 72  Q
    |||||||||||||||| ||| || ||| |||||| |||||||||  | ||||||||| |||||||    
T  41073025 aaaaataattaatgattgtgagatccatttaatgataggacccaccaactattttatatgtctat 41072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42761705 - 42761831
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||||||||||||||||  ||| ||||||| | |||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42761705 aaaattaaaaaataattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaattgcgtacttccattta 42761804  T
Q  101 ttttatcaaatgaagaggatcctaacc 127  Q
    |||||| || |||||||||||||||||    
T  42761805 ttttattaagtgaagaggatcctaacc 42761831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26749631 - 26749546
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||||    
T  26749631 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattg 26749546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30426752 - 30426671
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  30426752 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 30426671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21360268 - 21360400
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgta----cttcca 96  Q
    |||| |||||| |||||||| || |||||  ||||||||||||| || | ||||||||| |||||||| |||||||||||||||| ||||    |||| |    
T  21360268 aaaaataaaaagtaattaataatggtggggtccacttaatggtatgatctattatctatattatgtgtttatctctctccaaattatgtatgtacttc-a 21360366  T
Q  97 tttattttatcaaatgaagaggatcctaacccct 130  Q
    |||||||||||||||| |||||||||||||||||    
T  21360367 tttattttatcaaatggagaggatcctaacccct 21360400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24557264 - 24557162
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||||||| ||||||||||| | ||||||| |||||||||  | ||||||||||    
T  24557264 aaaagtaaaaagtaattaatgatgatgggactcacttaatggtaggacccattacctattttatgtctatatctctttccaaattgcat-cttccattta 24557166  T
Q  101 tttt 104  Q
    ||||    
T  24557165 tttt 24557162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28069711 - 28069831
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||||||| |||   |  ||||||||    
T  28069711 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccattta 28069810  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  28069811 ttttgccaaatggagaggatc 28069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36991348 - 36991468
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||| ||| |||||||||||| |||||||||||||| ||||||||||||| ||||||||  | ||||||||||||||||| |||   |  ||||||||    
T  36991348 aaaagtcaaatataattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccattta 36991447  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  36991448 ttttgccaaatggagaggatc 36991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 18689488 - 18689585
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 104  Q
    |||||| |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  18689488 taaaaagtaattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 18689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6014186 - 6014307
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||| || ||||||| || ||||||||||| |||||||||||   |  || ||||    
T  6014186 aaaagtaaaacataattaatgataataggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctattt 6014285  T
Q  100 attttatcaaatgaagaggatc 121  Q
    |||||| |||||| ||||||||    
T  6014286 attttagcaaatggagaggatc 6014307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 42338124 - 42338008
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttta 105  Q
    |||||| ||||||||||| | ||||| |||||||| |||  | ||| |||||||||||  ||| ||| |||||||||||| | |||||  ||||||||||    
T  42338124 taaaaagtaattaatgatggagggacacacttaatagtacaatccactatctattttacatgtatatatctctccaaattatatactta-atttatttta 42338026  T
Q  106 tcaaatgaagaggatcct 123  Q
    ||||||||||||||||||    
T  42338025 tcaaatgaagaggatcct 42338008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 36748566 - 36748492
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    ||||||||||||||| |||||| |||||||||||||||||||  | |||||||| ||||||||||| |||||||||    
T  36748566 aaaataattaatgatggtgggatccacttaatggtaggacccgctgtctatttt-tgtgtctatctatctccaaat 36748492  T

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Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40695330 - 40695249
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||| ||||||| |||| || |||||| |||||||||| |  ||||||||| |||||||||||||||||||    
T  40695330 aaaagtaaaatataactaatgatggtggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaa 40695249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 10672591 - 10672519
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctc 77  Q
    |||||| |||||||||||| ||||||| |||||| |||||||| |||  ||||||||| ||||||||||||||    
T  10672591 gtaaaatataattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctatctctc 10672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 45113262 - 45113390
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    |||| ||||||||||||||||||  |||||| |||||| |||| |||||||  ||||||| || ||||||||| |||||||||||||   |   | ||||    
T  45113262 aaaaataaaaaataattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaattt 45113361  T
Q  100 attttatcaaatgaagaggatcctaaccc 128  Q
    |||||| |||||| |||||||| ||||||    
T  45113362 attttagcaaatggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1937238 - 1937152
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccatta-tctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| ||||||||| |||| || |||||||||  | |   |||| |||||||||||||||||||||||    
T  1937238 aaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtgtctatctctctccaaattg 1937152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6149043 - 6148997
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtagga 47  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||    
T  6149043 aaaagtaaaaaataattaatgatagtgggatccacttaatgatagga 6148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10652701 - 10652571
Alignment:
Q  1 aaaagtaaaaa-ataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    ||||||||||| |||||||||||| |||||||||| ||| | ||| ||||||  ||| ||||| ||| ||||||||||||||| |||   |   ||||||    
T  10652701 aaaagtaaaaatataattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccattt 10652602  T
Q  100 attttatcaaatgaagaggatcctaacccct 130  Q
    |||||| |||||| |||||||| | ||||||    
T  10652601 attttaccaaatggagaggatcttcacccct 10652571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 17520381 - 17520459
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||| ||||||| || || | ||||||||||| ||||||| |  |||||||||||||||||||| |||||||||||||    
T  17520381 aaaaaaaattaataatggtagaacccacttaatagtaggactcgctatctattttatgtgtctatatctctccaaattg 17520459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 34612562 - 34612640
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    ||||||||||||||||| ||| |||||||||| || |||||||||  |  |||||| |||||||||||||||| |||||    
T  34612562 aaaaaataattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctctaaatt 34612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28318985 - 28318924
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatttt 62  Q
    |||||||||| |||||||||||| || ||||||||||| |||||||||||| ||||| ||||    
T  28318985 aaaagtaaaatataattaatgatggttggacccacttagtggtaggacccactatctttttt 28318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41511254 - 41511335
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||| | ||||||| || ||||||||| |||||||||| | | ||||||||| |||||    
T  41511254 aaaagtaaaatataattaatgatggtggaaaccacttagtgataggacccactatctattttttatatctatctctttccaa 41511335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6399916 - 6399991
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 76  Q
    |||||||||||||||||||||||| ||||| ||||||  |  || ||||||  ||||||||| |||||||||||||    
T  6399916 aaaagtaaaaaataattaatgataatgggatccacttggtaataagacccaccatctattttttgtgtctatctct 6399991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 37966525 - 37966397
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||| || ||||  | | ||| |||||||||| |  ||||||||| ||||| ||||||||| |||||||   | |||||||||    
T  37966525 aaaagtaaaatataattaatggtattgggttcaa-ttagtggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaa-ttccattta 37966428  T
Q  101 ttttatcaaatgaagaggatcctaacccctc 131  Q
    ||||  |||||| |||||||| |||||||||    
T  37966427 ttttgccaaatggagaggatcttaacccctc 37966397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3763605 - 3763520
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||||  |||||||||  |||| ||||||||||||||||||||||  | || |||| | |||||| | ||||||||||||    
T  3763605 aaaagtaaaaagcaattaatgacggtggaacccacttaatggtaggacccaccaccttttttttttgtctaccactctccaaattg 3763520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30796270 - 30796307
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccactta 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  30796270 aaaagtaaaaaataattaatgatggtgggacccactta 30796307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44859250 - 44859189
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatttt 62  Q
    |||| ||||| |||||||||||| |||||||||||||| |||||| |||||  |||||||||    
T  44859250 aaaaataaaatataattaatgatggtgggacccacttagtggtagaacccaccatctatttt 44859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 20169125 - 20169190
Alignment:
Q  66 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccctct 132  Q
    |||||||||||||||||||||  | ||||||||||||||   ||||| |||||||| ||||||||||    
T  20169125 tgtctatctctctccaaattgcat-cttccatttatttttataaatggagaggatcttaacccctct 20169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 24102019 - 24102085
Alignment:
Q  12 ataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||||||||||| |||| || |||||| |||||||| |||  ||||||||| | |||||||||||||    
T  24102019 ataattaatgatggtggaactcacttagtggtaggatccaccatctattttttatgtctatctctct 24102085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24241567 - 24241608
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatgg 42  Q
    ||||||||||||||||||||||| |||  |||||||||||||    
T  24241567 aaaagtaaaaaataattaatgatggtgaaacccacttaatgg 24241608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 21486925 - 21486993
Alignment:
Q  11 aataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    ||||||||||||| ||||||| |||||||| |||| ||||| ||| |||||| | | || |||||||||    
T  21486925 aataattaatgatggtgggactcacttaatagtagaacccactatatattttttatatccatctctctc 21486993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24241673 - 24241705
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggaccc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24241673 aaaagtaaaaaataattaatgatggtgggaccc 24241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 29340999 - 29341106
Alignment:
Q  13 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 112  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||  ||| |||||||||| || ||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcatac-tccatttattataccaaatg 29341097  T
Q  113 aagaggatc 121  Q
     ||||||||    
T  29341098 gagaggatc 29341106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35660692 - 35660572
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  35660692 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 35660593  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  35660592 ttttgccaaatggagaggatc 35660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4895818 - 4895699
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  4895818 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 4895719  T
Q  101 ttttatcaaatgaagaggat 120  Q
    ||||  ||||| ||||||||    
T  4895718 ttttgccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11775785 - 11775905
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||  |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  11775785 aaaagtaaaatataattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 11775884  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||| |||||| ||||||||    
T  11775885 ttttaccaaatggagaggatc 11775905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 32129700 - 32129580
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  |||||||||  |||||||||||||||||| || |  |  ||||||||    
T  32129700 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccattta 32129601  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  32129600 ttttgccaaatggagaggatc 32129580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14349795 - 14349876
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  14349795 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaa 14349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18625504 - 18625384
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||||||| |||   |  ||||||||    
T  18625504 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccattta 18625405  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  18625404 ttttgccaaatggagaggatc 18625384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 37266723 - 37266843
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  37266723 aaaactaaaatataattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 37266822  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  37266823 ttttgccaaatggagaggatc 37266843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10362097 - 10362012
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||| ||| || | ||||||||| ||||||||||||| |||||    
T  10362097 aaaagtaaaaaataattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattg 10362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36290594 - 36290679
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||| ||||||| || |||||||||  |  |||||| |||||||||||||||||||||||    
T  36290594 aaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattg 36290679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40753245 - 40753164
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||||    
T  40753245 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaa 40753164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 43309108 - 43309220
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||| |||||||||| |||| ||||| ||||||||| || ||| |||||||||| | ||||||||||||||||| |||   |  ||||||||||||||||    
T  43309108 aaaaaaattaatgatggtggaacccatttaatggtaagatccactatctattttttatgtctatctctctccaacttgcaaaactccatttattttatca 43309207  T
Q  109 aatgaagaggatc 121  Q
    ||| |||||||||    
T  43309208 aataaagaggatc 43309220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34827184 - 34827287
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||| ||| |||||||||||||| |||||||| |||  ||||||||| | ||||||||||||||||| |||  ||  ||||||||    
T  34827184 aaaagtaaaatataattaaagatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccattta 34827283  T
Q  101 tttt 104  Q
    ||||    
T  34827284 tttt 34827287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39902407 - 39902525
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||| | ||| ||| ||||||||||||  ||||||||  ||||| ||||||||||||| ||||  |  ||||||||    
T  39902407 aaaagtaaaatataattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccattta 39902506  T
Q  101 ttttatcaaatgaagagga 119  Q
    |||| ||||||| ||||||    
T  39902507 ttttgtcaaatggagagga 39902525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2984473 - 2984389
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    |||| |||||||||||||||||| |||||||||| ||| || |||||  ||| |  |||||||||||||||||||||||||||||    
T  2984473 aaaaataaaaaataattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaaatt 2984389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13032110 - 13032230
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||| ||| ||||||||| ||  ||||||||  ||||||||||||||||||| |||   |  ||||||||    
T  13032110 aaaaataaaatataattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccattta 13032209  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  13032210 ttttgccaaatggagaggatc 13032230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 31653032 - 31653112
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||| ||||||||||| ||| ||| |||||||| ||||||| |  |||||||||||||||| |||||||||||||||||    
T  31653032 taaaaagtaattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattg 31653112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3057237 - 3057152
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||| ||||||||||||  || ||| ||||||||||||||| |||  ||||||||| ||||| ||||||| |||||||||    
T  3057237 aaaagtaaaatataattaatgattatgtgactcacttaatggtaggatccaccatctattttttgtgtttatctctatccaaattg 3057152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18653353 - 18653438
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||| |||||||||| | || ||| ||| ||||||||||||| || || |||||||||| ||||||||||||||| |||||||    
T  18653353 aaaagtataaaataattattaatggtgagactcacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattg 18653438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 41660100 - 41660183
Alignment:
Q  3 aagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||| ||||||||||| || || |  ||||||  |  |||||| |||||||||||||||||||||||    
T  41660100 aagtaaaaaataattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattg 41660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4592792 - 4592858
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtg 67  Q
    |||||||||| |||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||    
T  4592792 aaaagtaaaatataattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14688566 - 14688643
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||||| |||||||  ||||||| |||| | |||||||||||||| | ||| ||||||||||||||||| ||||||||    
T  14688566 aaaagtcaaaaatatctaatgatggtggaatccacttaatggtagaatccaatatctattttatgtgtcgatctctct 14688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 31279914 - 31279990
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    |||||||||||| || || |||||||| ||||| |||||||||  || ||||||||||||||| | |||||||||||    
T  31279914 aaaataattaattatggtaggacccacataatgataggacccacaatttattttatgtgtctagcactctccaaatt 31279990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3057408 - 3057534
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||| |||||||||||||||  ||| || |||||  |||||||| |||| |||| |||| | ||||||||||||||| |||||   || || |||||    
T  3057408 aaaagtataaaataattaatgatgatggaactcactttgtggtaggatccatcatcttttttttttgtctatctctctccgaattgaaaac-tctattta 3057506  T
Q  101 ttttatcaaatgaagaggatcctaaccc 128  Q
    |||||  ||||| |||||||| ||||||    
T  3057507 ttttacaaaatggagaggatcttaaccc 3057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 43222126 - 43222193
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 76  Q
    ||||||||||||||| |||||| ||| |||||| || ||||||  ||||||||| |||||||||||||    
T  43222126 aaaataattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 9460662 - 9460597
Alignment:
Q  57 tattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 123  Q
    |||| |||||||||||||||||||||||||  ||| || |||||||||| |||||| ||||||||||    
T  9460662 tattatatgtgtctatctctctccaaattgcatac-tctatttattttaccaaatggagaggatcct 9460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 27428949 - 27428879
Alignment:
Q  16 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||| |||| || |||||||||||||||  ||  ||||||||| ||||||||||||| |||||||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattg 27428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28142858 - 28142812
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtagga 47  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||    
T  28142858 aaaagtaaaatataattaatgatggtgggactcacttaatggtagga 28142812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31546478 - 31546563
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| |||||||| ||  ||||| ||||||||| ||||| ||||  ||||||||||| |||||| |||||| |||||||    
T  31546478 aaaactaaaaagtaattaattatgatgggatccacttaatagtagggcccaccatctattttatatgtctacctctcttcaaattg 31546563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17247398 - 17247482
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaatt 85  Q
    |||||||||||||||||||| ||  ||| || ||||||||| ||| |||||  | ||||||| || ||||||||||||| |||||    
T  17247398 aaaagtaaaaaataattaattatgatggaacgcacttaatgatagaacccaccacctattttttgcgtctatctctctctaaatt 17247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 38283776 - 38283855
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||||||||||||||  |||  | |||||| || ||||||  | ||| ||||||||||||| ||||||||||||||    
T  38283776 aaaaataattaatgatagtcagacttatttaatgatatgacccaccacctactttatgtgtctatatctctccaaattgt 38283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3041391 - 3041341
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    |||| |||||||||||||||||| ||||||||| |||| || |||||||||    
T  3041391 aaaaataaaaaataattaatgatggtgggacccgcttagtgataggaccca 3041341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 21213953 - 21213987
Alignment:
Q  94 ccatttattttatcaaatgaagaggatcctaaccc 128  Q
    ||||||||||||||||||| |||||||||||||||    
T  21213953 ccatttattttatcaaatggagaggatcctaaccc 21213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8441054 - 8440981
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatct 74  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||| | | ||  |||||||||  ||||||||||    
T  8441054 aaaagtaaaatataattaatgatggtgggacacacttagtggtatgtcgcaccatctatttttggtgtctatct 8440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19902001 - 19901881
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  19902001 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 19901902  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||| |||||| ||||||||    
T  19901901 ttttaccaaatggagaggatc 19901881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36532618 - 36532741
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||||||||| || |||| ||||||| |||| ||||| ||| ||| ||||||||||||||||||||||| |||||||| || ||||||||    
T  36532618 aaaagtaaaaaataattaat-atggtggaacccactgaatgataggatccactatttattttatgtgtctatctctctctaaattgtgaac-tccattta 36532715  T
Q  101 ttttatcaaatgaagaggatcctaac 126  Q
    |||||||| ||| |||||||| ||||    
T  36532716 ttttatcagatggagaggatcttaac 36532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5416548 - 5416429
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  5416548 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacaatctatttt-tgtgtctatctctctccaacttgcaaaactccattta 5416450  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||| ||||||| ||||||||    
T  5416449 ttttgtcaaatggagaggatc 5416429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23610634 - 23610754
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| ||| |||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  23610634 aaaagtaaaatatatttaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 23610733  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||||||||||| ||||||||    
T  23610734 ttttatcaaatggagaggatc 23610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 56453903 - 56453777
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||  | ||||||| |||||||||||||||||||||||  | ||||||||||    
T  56453903 aaaagtaaaaaataatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgcat-cttccattta 56453805  T
Q  101 ttt-tatcaaatgaagaggatcctaaccc 128  Q
    ||| ||| ||||| |||||||| ||||||    
T  56453804 tttctat-aaatggagaggatcttaaccc 56453777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 56558271 - 56558400
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| || |||||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  56558271 aaaagtaaaatataattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccattta 56558370  T
Q  101 ttttatcaaatgaagaggatcctaacccct 130  Q
    ||||  |||||| |||||||| | ||||||    
T  56558371 ttttgccaaatggagaggatcttcacccct 56558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42844270 - 42844148
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||||||||||||| | |||| ||| ||||| ||||||| || | |||||||||||||||||||| |||||||||||| ||  || |||||    
T  42844270 aaaagtaaaaaataattaatgatggagggatccatttaatagtaggacacactctctattttatgtgtctatctatctccaaattgt-taactctattta 42844172  T
Q  101 ttttatcaaatgaagaggatccta 124  Q
    |||||| | ||| |||||||||||    
T  42844171 ttttataatatggagaggatccta 42844148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5763245 - 5763159
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| ||||||||||||||| ||||    
T  5763245 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgt 5763159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 1871277 - 1871392
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||||||||||||||  ||||||||||||| | |||||| ||| ||||||| || | |||||||||||||||||||||  ||| |||||||||||| |||    
T  1871277 aaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgcatac-tccatttattttgtca 1871375  T
Q  109 aatgaagaggatcctaa 125  Q
    |||  ||||||||||||    
T  1871376 aattgagaggatcctaa 1871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3952253 - 3952133
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||||||||||  ||||||||| | ||||||||||||||||| |||   |  ||||||||    
T  3952253 aaaagtaaaatataattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccattta 3952154  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  3952153 ttttgccaaatggagaggatc 3952133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34778413 - 34778533
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||| |||  ||||||||| ||||||||||||||| ||| |||   |  ||||||||    
T  34778413 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccattta 34778512  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  34778513 ttttgccaaatggagaggatc 34778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 56269153 - 56269074
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||  |  |||||| |||||||||||||||||||||||    
T  56269153 aaaaaataattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattg 56269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5524439 - 5524524
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||  |  |||||| | |||||||||||||||||||||    
T  5524439 aaaagtaaaaaataattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattg 5524524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5815383 - 5815267
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||||| ||||| ||| ||  |||  ||||| ||||| |||||||||| ||||||  ||||||||||||||| ||||| |||||| |||||||    
T  5815383 aaaagtaaaaaattattaaagatggtccgacttacttagtggtatgacccattatatatttt--gtgtctatctctctcaaaattttgtact-ccattta 5815287  T
Q  101 ttttatcaaatgaagaggat 120  Q
    |||||||||||| |||||||    
T  5815286 ttttatcaaatggagaggat 5815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 48914596 - 48914516
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||||||||||||| || |||||||| ||| |||||||||  |||||||||||||||| ||||||||| ||||||    
T  48914596 taaaaaataattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattg 48914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 15178738 - 15178628
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatc 107  Q
    ||||||||||||||| ||||||||||||||||| ||||            ||||||||||| ||||||||| |||||| |||||||||||| ||||||||    
T  15178738 aaaaataattaatgaaagtgggacccacttaatagtag-----------aattttatgtgtttatctctcttcaaattatgtacttccattcattttatc 15178650  T
Q  108 aaatgaagaggatcctaacccc 129  Q
    ||||| |||| |||||||||||    
T  15178649 aaatggagagaatcctaacccc 15178628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 47922450 - 47922324
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    ||||||||||||||||||  |||  ||||||||||||| ||||||||||||  ||||||| || ||||||||| |||||||||||||   |  || ||||    
T  47922450 aaaagtaaaaaataattatagatgatgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaattt 47922351  T
Q  100 attttatcaaatgaagaggatcctaac 126  Q
    |||||| |||||| |||||||| ||||    
T  47922350 attttagcaaatggagaggatcttaac 47922324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23474103 - 23474188
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| ||||||||||| ||||||  |||| ||| ||||||||||  |||||||||||||||||||||||| ||||||||    
T  23474103 aaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaattg 23474188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30567893 - 30567970
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 78  Q
    |||||||||| ||||||||||||  ||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  30567893 aaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctct 30567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 18207119 - 18207003
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 104  Q
    |||||| ||||||||||||  ||||||||||||| ||||||||||||  ||||||||| | |||||||||||||| || |||   |  | ||||||||||    
T  18207119 gtaaaatataattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttatttt 18207020  T
Q  105 atcaaatgaagaggatc 121  Q
     ||||||| ||||||||    
T  18207019 gtcaaatggagaggatc 18207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39862509 - 39862629
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||| || || ||| || |||||| ||  ||||||||| |||||||||||||||| || |||   | ||| |||||    
T  39862509 aaaagtaaaatataattaatgatggtggaactcatttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctattta 39862608  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||||||||||| ||||||||    
T  39862609 ttttatcaaatggagaggatc 39862629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 24073619 - 24073689
Alignment:
Q  12 ataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||||| | |||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  24073619 ataattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaa 24073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33262635 - 33262557
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    |||||||||| |||||||||||| |||||||| | ||| |||||||| |||  ||||||||| ||||||||||||||||    
T  33262635 aaaagtaaaatataattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgtctatctctctc 33262557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 36688264 - 36688186
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||||||||| |||||||||||||| || |||||| ||  |  |||||| |||||||||||||||||||||||    
T  36688264 aaaaataattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattg 36688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37002334 - 37002249
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| |  ||||| |||  |  |||||| ||||||||||||| |||||||||    
T  37002334 aaaagtaaaaaataattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattg 37002249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42010109 - 42010194
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||||   |  |||||| ||| |||||||||||||||||||    
T  42010109 aaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattg 42010194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 12312558 - 12312438
Alignment:
Q  2 aaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatcta-ttttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||| ||||||||||||  ||||||||||||| |||||||| |||  ||||| |||| | ||||||||||||||||| |||   |  ||||||||    
T  12312558 aaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccattta 12312459  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  12312458 ttttgccaaatggagaggatc 12312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33247213 - 33247093
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||| ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||| |||   |  ||||||||    
T  33247213 aaaaataaaatataattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccattta 33247114  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  33247113 ttttgccaaatggagaggatc 33247093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46804623 - 46804671
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacc 49  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  46804623 aaaagtaaaaagtaattaatgatagttggacccacttaatggtaggacc 46804671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 1015931 - 1015852
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||| ||||||||||| ||||| | |||||||  |  |||||| |||||||||||||||| ||||||    
T  1015931 aaaaaataattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattg 1015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 50483629 - 50483554
Alignment:
Q  11 aataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||||||||||||| || ||| ||||||||||| ||| | | ||||||||||| |||||||||| |||||||||||    
T  50483629 aataattaatgataatgtgactcacttaatggtgggatcgaatatctattttacgtgtctatctgtctccaaattg 50483554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12241491 - 12241441
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  12241491 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 12241441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31862303 - 31862257
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtagga 47  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  31862303 aaaagtaaaaaataattaatgatggtgggacccacttagtggtagga 31862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38079803 - 38079725
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    |||||||||| |||||||||||| |||| | ||||||| | ||||||||||  ||||||||  ||||||||||||||||    
T  38079803 aaaagtaaaatataattaatgatggtggaatccacttagtagtaggacccaccatctatttcttgtgtctatctctctc 38079725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 13493276 - 13493387
Alignment:
Q  13 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtcta--tctctctccaaattgtgtacttccatttattttatcaaa 110  Q
    ||||||||||||  ||||| |||||| |||| ||| ||| ||||||||||| |||||||  |||||||| ||||||  ||| |||||||||||| |||||    
T  13493276 taattaatgataaagggactcacttagtggtgggatccactatctattttacgtgtctatctctctctctaaattgcatac-tccatttattttgtcaaa 13493374  T
Q  111 tgaagaggatcct 123  Q
    |  ||||||||||    
T  13493375 tagagaggatcct 13493387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 33841830 - 33841766
Alignment:
Q  58 attttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcct 123  Q
    ||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||| ||||||||||    
T  33841830 attttttgtgtctatctctctccaaattgtatac-tccatttactttaacaaatggagaggatcct 33841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37337174 - 37337091
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    ||||| ||||||||||||||||| ||||||||  |||||||| |  ||||| || ||||||||||| ||||||| |||| ||||    
T  37337174 aaaagcaaaaaataattaatgatggtgggacctccttaatggcataacccactacctattttatgtctctatctttctctaaat 37337091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48084608 - 48084558
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||    
T  48084608 aaaagtaaaaaataattaatgatggtgggacccacttagtgctagaaccca 48084558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4404282 - 4404409
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatc--tattttatgtgtctatctctctccaaattgtgtacttccatt 98  Q
    ||||||||||| ||||||||||| ||| ||| ||||||||| ||||||||| || |  | |||| | ||||||||| ||||||||||   | ||||||||    
T  4404282 aaaagtaaaaattaattaatgatggtgagacacacttaatgataggacccactaacctttttttttttgtctatctttctccaaattacat-cttccatt 4404380  T
Q  99 tattttatcaaatgaagaggatcctaacc 127  Q
    ||||||   ||||| |||||||| |||||    
T  4404381 tatttttataaatggagaggatcttaacc 4404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3326509 - 3326560
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccat 52  Q
    |||||||||||||||||||| || |||| ||||| ||||||||| |||||||    
T  3326509 aaaagtaaaaaataattaataatggtggaacccatttaatggtatgacccat 3326560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34927484 - 34927555
Alignment:
Q  8 aaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctct 78  Q
    ||||||||||||||||  || |||  ||||||||||||||||||  ||||||| || |||||||||||||||    
T  34927484 aaaaataattaatgatgatgagacatacttaatggtaggacccaccatctattcttttgtgtctatctctct 34927555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5361435 - 5361469
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  5361435 aaaagtaaaaaataattaatgatggtgggacccac 5361469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 47834573 - 47834607
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  47834573 aaaagtaaaaaataattaatgatggtgggacccac 47834607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 5817976 - 5818013
Alignment:
Q  50 cattatctattttatgtgtctatctctctccaaattgt 87  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  5817976 cattatctcttttttgtgtctatctctctccaaattgt 5818013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 36003300 - 36003216
Alignment:
Q  30 acccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaag 115  Q
    ||||||||||||  | |||||| ||| |||||| ||| | |||||||||||||||||  ||||| ||||||||||  |||||||||    
T  36003300 acccacttaatgacatgacccaatatttattttttgtatttatctctctccaaattgcatactt-catttattttgacaaatgaag 36003216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 17080811 - 17080855
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggaccca 51  Q
    ||||||||||||||||| ||| ||| |||| ||||||||||||||    
T  17080811 aaaaaataattaatgatggtgagactcactcaatggtaggaccca 17080855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 52552772 - 52552804
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaa 39  Q
    |||||||||||||||||||||||| ||||||||    
T  52552772 aaaaaataattaatgatagtgggatccacttaa 52552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 4888464 - 4888579
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttta 105  Q
    ||||| |||||||||||| |||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||| |||   |  ||||||||||||     
T  4888464 taaaatataattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttg 4888563  T
Q  106 tcaaatgaagaggatc 121  Q
    ||||||| ||||||||    
T  4888564 tcaaatggagaggatc 4888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 47799983 - 47799898
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||||    
T  47799983 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattg 47799898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 40023333 - 40023215
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttat 106  Q
    ||||||||||||||| | |||||||||||||||||||| || |||||| ||||||||| ||||||||| |||||||||||| ||| ||  |||||||| |    
T  40023333 aaaaaataattaatggtggtgggacccacttaatggtaagatccattaactattttatatgtctatctttctccaaattgtatac-tcgttttatttttt 40023235  T
Q  107 caaatgaagaggatcctaac 126  Q
    |||||  ||||||| |||||    
T  40023234 caaatagagaggattctaac 40023215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12139318 - 12139400
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggaccc-acttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  12139318 aaaagtaaaatataattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaa 12139400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25084811 - 25084730
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  25084811 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 25084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 33450498 - 33450627
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    |||| ||||||||||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||||||||||||   |  || ||||    
T  33450498 aaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaattt 33450597  T
Q  100 attttatcaaatgaagaggatcctaacccc 129  Q
    |||||| |||||| |||||||| |||||||    
T  33450598 attttagcaaatggagaggatcttaacccc 33450627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 47270580 - 47270668
Alignment:
Q  39 atggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaaccc 128  Q
    |||||||| || ||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||||||||||||    
T  47270580 atggtagggcctattatctattt-atgtgtctatctatctctaaattgtgtaattccatttattttatcaaatagagaggatcctaaccc 47270668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9559137 - 9559017
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| ||||||||||||||| |||   |  ||||||||    
T  9559137 aaaaataaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccattta 9559038  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  9559037 ttttgccaaatggagaggatc 9559017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39855896 - 39855770
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||||  |||||||||||  ||||||||||||| |||||||||| |  |||| |||||||||||||||||||||||||||    || ||||||||    
T  39855896 aaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaattacaaac-tccattta 39855798  T
Q  101 ttttatcaaatgaagaggatcctaaccc 128  Q
     ||| |||||||||||| ||| ||||||    
T  39855797 atttgtcaaatgaagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7362560 - 7362676
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||| ||||| ||| ||||| ||||||  ||||||||| ||||||||||||||||||| |||   |  ||||||||    
T  7362560 aaaagtaaaatataattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccattta 7362659  T
Q  101 ttttatcaaatgaagag 117  Q
    |||| ||||||| ||||    
T  7362660 ttttgtcaaatggagag 7362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7712450 - 7712331
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| |||||| ||||||| ||| |||| ||||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||  | ||||||||||    
T  7712450 aaaaataaaaagtaattaaagatggtggcacccacttaatggtaggactcactatctatcttatgtctctatctctctctaaattgcat-cttccattta 7712352  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||   ||||| ||||||||    
T  7712351 tttttataaatggagaggatc 7712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16366510 - 16366630
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| ||||||| |||||| |||||||| |||  ||||||||  | ||||||||||||||||| |||   |  ||||||||    
T  16366510 aaaagtaaaatataattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccattta 16366609  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    |||| ||||||| ||||||||    
T  16366610 ttttgtcaaatggagaggatc 16366630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21151144 - 21151264
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||| ||   ||||||||  ||||||||||||||||||| |||   |  ||||||||    
T  21151144 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccattta 21151243  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  21151244 ttttgccaaatggagaggatc 21151264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 989129 - 989239
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||||||||||| || || ||||| ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||   || |||||||| ||| |||    
T  989129 aaaataattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgcaaac-tccatttaatttgtca 989227  T
Q  109 aatgaagaggat 120  Q
    |||| |||||||    
T  989228 aatggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 32915954 - 32916033
Alignment:
Q  7 aaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    |||| |||||| ||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||    
T  32915954 aaaatataattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattg 32916033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47500366 - 47500236
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    |||| ||||||||||||||||||  ||||||||||||| |||| |||||||  ||||||| || ||||||||||||||||||||||    |  || ||||    
T  47500366 aaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaattt 47500267  T
Q  100 attttatcaaatgaagaggatcctaacccct 130  Q
    ||||||  ||||| |||||||| ||||||||    
T  47500266 attttagtaaatggagaggatcttaacccct 47500236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 8149605 - 8149686
Alignment:
Q  5 gtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||| ||  ||||||| || ||||||||||| |||||||    
T  8149605 gtaaaaaataattaatgatggtgggacccacttaatgatatgacccactacttattttacgtctctatctctcttcaaattg 8149686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30588527 - 30588612
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||| | |  |||||| |||||||||||||  ||||||||    
T  30588527 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctcttcccaaattg 30588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45260510 - 45260429
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| ||||||||||||  ||||| ||||||| |||||||| |||  ||||||||| |||||||||||||||||||    
T  45260510 aaaagtaaaatataattaatgatgatgggatccacttagtggtaggatccacaatctattttttgtgtctatctctctccaa 45260429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29631040 - 29631156
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||||| |||||||||||||||||||||| || || |||| ||||||| ||||||| || |||||||||||||   |||||||   ||| |||||||    
T  29631040 aaaagtaaagaataattaatgatagtgggacctacatagtggttggacccactatctatgttttgtgtctatctctt--caaattgcaaact-ccattta 29631136  T
Q  101 ttttatcaaatgaagaggat 120  Q
    ||||| |||||| |||||||    
T  29631137 ttttaccaaatggagaggat 29631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 29844316 - 29844372
Alignment:
Q  34 acttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgta 90  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaaattgtgta 29844372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 7373867 - 7373985
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    |||| ||||||||||||||||| | ||||||| ||| |||||| | |||||||| |||  ||||||||||||||||||  || | |||||||||||| |     
T  7373867 aaaaaaattaatgatagtgggatctacttaatagtaagacccactgtctattttttgtacctatctctctccaaattgcata-tcccatttattttaacc 7373965  T
Q  109 aatgaagaggatcctaaccc 128  Q
    || |||||||||| ||||||    
T  7373966 aacgaagaggatcttaaccc 7373985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24193585 - 24193668
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    |||| |||||| |||||| ||||  ||||| ||| ||||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  24193585 aaaattaaaaagtaattactgatgatgggatccatttaatggtaagactcattgtctattttatgtgtctatctctcttcaaat 24193668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38365647 - 38365761
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    ||||||| |||||||||||||||||| | | ||| ||||| ||| ||||||||||| ||||| ||| |||||||| || ||||||  ||| || ||||||    
T  38365647 aaaagtataaaataattaatgatagtagaatccatttaatagtaagacccattatcaattttttgtatctatctcacttcaaattacgta-ttacattta 38365745  T
Q  101 ttttatcaaatgaaga 116  Q
    |||||  |||||||||    
T  38365746 ttttaaaaaatgaaga 38365761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 44647958 - 44648076
Alignment:
Q  5 gtaaaaaataattaatgatagtggga--cccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatt 102  Q
    |||||| |||||||||||| | ||||  |||||||| |||| ||| |||  ||||||||| ||||||||||||||||||| |||   |  ||||||||||    
T  44647958 gtaaaatataattaatgatggagggagacccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatt 44648057  T
Q  103 ttatcaaatgaagaggatc 121  Q
    || ||||||| ||||||||    
T  44648058 ttgtcaaatggagaggatc 44648076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 18198248 - 18198377
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||| ||||| |||||||||||| ||||||| |||||| ||| || |||||  ||||||||| ||||||||| | ||||||| |||   |  ||||||||    
T  18198248 aaaaataaaatataattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccattta 18198347  T
Q  101 ttttatcaaatgaagaggatcctaacccct 130  Q
    ||||  |||||| |||||||| | ||||||    
T  18198348 ttttgccaaatggagaggatcttcacccct 18198377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19889117 - 19889032
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||||||||||||||| |||| ||||||||| || |||||||||  |  |||||| ||| ||||||||| || ||||||    
T  19889117 aaaagtaaaaaataattaatgatggtggaacccacttagtgataggacccacaacttattttttgtatctatctctttctaaattg 19889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 47226157 - 47226039
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| |||||||||||| |||||||||| ||| |||| |||||||  |  |||||| ||||| ||||||||||||| |||   |  ||||||||    
T  47226157 aaaagtaaaatataattaatgatggtgggacccatttagtggtgggacccacca--tattttttgtgtttatctctctccaacttgcaaaactccattta 47226060  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  47226059 ttttgccaaatggagaggatc 47226039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11828992 - 11828945
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggac 48  Q
    |||| |||||||||||||||||| |||| |||||||||||||||||||    
T  11828992 aaaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 46802406 - 46802331
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 84  Q
    ||||||||||| | | |||||||||||||| ||||||||||||   |||||||| | |||||||||||||| ||||    
T  46802406 aaaataattaacggtggtgggacccacttagtggtaggacccaccgtctattttttatgtctatctctctctaaat 46802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34986029 - 34985943
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaattg 86  Q
    |||| ||||||||||||||||||  |||||| || ||| ||||  ||||||  ||||||| || |||||||||||||||||||||||    
T  34986029 aaaaataaaaaataattaatgatgatgggactcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattg 34985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 5463934 - 5463867
Alignment:
Q  53 tatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatc 121  Q
    |||||||||||||||| ||| |||||||||||||| ||| |  ||||||| ||||||||| ||||||||    
T  5463934 tatctattttatgtgtttatatctctccaaattgtatac-tatatttattatatcaaatggagaggatc 5463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 19027751 - 19027680
Alignment:
Q  17 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattgt 87  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | |||||||||||||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaattgt 19027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 20726885 - 20726956
Alignment:
Q  17 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaattgt 87  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | |||||||||||||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaattgt 20726956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 30153257 - 30153144
Alignment:
Q  9 aaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatca 108  Q
    ||||||||||||||| || | || |||||| || |||  | ||||||| ||| |||| |||||||||||| |||||||  || |||||||| |||| | |    
T  30153257 aaaataattaatgatggtagtactcacttagtgctagagctcattatcaattatatgcgtctatctctcttcaaattgcata-ttccatttgttttgtta 30153159  T
Q  109 aatgaagaggatcct 123  Q
    |||| ||||||||||    
T  30153158 aatggagaggatcct 30153144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 44390835 - 44390900
Alignment:
Q  66 tgtctatctctctccaaattgtgtacttccatttattttatcaaatgaagaggatcctaacccctct 132  Q
    |||||||||||||||||||||  | ||||||||||||||   ||||| |||||||| ||||||||||    
T  44390835 tgtctatctctctccaaattgcat-cttccatttatttttataaatggagaggatcttaacccctct 44390900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 18064588 - 18064643
Alignment:
Q  42 gtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattt 99  Q
    ||||||| || | |||||||||||||||||||||||||| ||||||||| ||||||||    
T  18064588 gtaggactcactgtctattttatgtgtctatctctctcc-aattgtgta-ttccattt 18064643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 208055 - 208175
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||||||||  ||||||||| ||||| ||||||||||||| |||   |  ||||||||    
T  208055 aaaagtaaaatataattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccattta 208154  T
Q  101 ttttatcaaatgaagaggatc 121  Q
    ||||  |||||| ||||||||    
T  208155 ttttgccaaatggagaggatc 208175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 58677 - 58774
Alignment:
Q  6 taaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccatttatttt 104  Q
    |||||| |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||  || |||||||||||||    
T  58677 taaaaagtaattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcata-ttccatttatttt 58774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 70783 - 70885
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattgtgtacttccattta 100  Q
    |||||||||||  |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||||  || |||||||||    
T  70783 aaaagtaaaaaggaattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcata-ttccattta 70881  T
Q  101 tttt 104  Q
    ||||    
T  70882 tttt 70885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7139 - 7220
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||| ||||| |||||||||||| |||| ||||||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  7139 aaaaataaaatataattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaa 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29652 - 29567
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaattg 86  Q
    ||||||||||  ||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||| |||||||||||| ||||||    
T  29652 aaaagtaaaatgtaattaatgatagtgggactcacgtaatgctaggacctattacctattttatgtctctatctctctctaaattg 29567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17389 - 17311
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 79  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||  |  |||||| ||||||||||||||||    
T  17389 aaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16480 - 16399
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||| ||||| ||||||||||||  ||||||||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  16480 aaaaataaaatataattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaa 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22525 - 22450
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 76  Q
    |||||||||| ||||||||| || |||| || |||||| |||||||| ||| |||||||||| |||||||||||||    
T  22525 aaaagtaaaatataattaattattgtggaactcacttagtggtaggatccactatctattttttgtgtctatctct 22450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 9273 - 9203
Alignment:
Q  12 ataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||||| |||| | ||||||| |||| |||||||  ||||||||| |||||||||||||||||||    
T  9273 ataattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaa 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6518 - 6437
Alignment:
Q  1 aaaagtaaaaaataattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 82  Q
    |||||||||| |||||||||||| || | ||||| ||| | ||||||||||  ||||||||| ||||||| ||||| |||||    
T  6518 aaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatctattttttgtgtctgtctctttccaa 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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