View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21293_low_36 (Length: 240)
Name: NF21293_low_36
Description: NF21293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21293_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 6273381 - 6273576
Alignment:
| Q |
33 |
catccacattttgtgaagagcttagaatatctaaactttgaaatggccaaagatcaaggagaagttcaattattgggtgtaggaggaagtccatttgttc |
132 |
Q |
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| T |
6273381 |
catcgacattttgtgaagagcttagaatatctaaacgttgaaatggccaaagatcaaggagaagttcaattgttaggtgtaggaggaagcccatttgttc |
6273480 |
T |
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| Q |
133 |
gaagggtgcaaattgctctaaaactaaagggtattgaatacacttacattgaagaaaatctaaggaacaaaagtgatcttcttcttaagtataatc |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6273481 |
gaagggtgcaaattgctctaaaactaaagggtattgaatacacttacattgaagaaaatttaaggaacaaaagtgatcttcttcttaagtataatc |
6273576 |
T |
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