View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21293_low_4 (Length: 570)

Name: NF21293_low_4
Description: NF21293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21293_low_4
NF21293_low_4
[»] chr3 (31 HSPs)
chr3 (1-552)||(38626582-38627133)
chr3 (173-248)||(39657982-39658057)
chr3 (169-247)||(42644300-42644379)
chr3 (163-209)||(48089641-48089687)
chr3 (144-247)||(30958105-30958209)
chr3 (144-247)||(30973917-30974021)
chr3 (169-207)||(7012678-7012716)
chr3 (167-205)||(24916576-24916614)
chr3 (169-255)||(25129444-25129530)
chr3 (169-247)||(31766160-31766238)
chr3 (170-207)||(10852738-10852775)
chr3 (170-207)||(23918881-23918918)
chr3 (150-207)||(50664777-50664834)
chr3 (150-205)||(1441362-1441417)
chr3 (160-247)||(25181239-25181326)
chr3 (169-248)||(32112088-32112167)
chr3 (169-216)||(40415312-40415359)
chr3 (169-248)||(44225603-44225682)
chr3 (176-255)||(49158621-49158700)
chr3 (147-205)||(3776594-3776652)
chr3 (169-211)||(7899143-7899185)
chr3 (169-211)||(16246115-16246157)
chr3 (169-207)||(23496355-23496393)
chr3 (169-247)||(41115275-41115353)
chr3 (169-211)||(52931593-52931635)
chr3 (169-206)||(31084245-31084282)
chr3 (154-207)||(34561131-34561184)
chr3 (152-205)||(41591308-41591361)
chr3 (161-206)||(49526695-49526740)
chr3 (146-202)||(7262885-7262941)
chr3 (171-199)||(47278803-47278831)
[»] chr8 (21 HSPs)
chr8 (144-210)||(2764419-2764485)
chr8 (150-205)||(15206723-15206778)
chr8 (169-207)||(19649232-19649270)
chr8 (152-247)||(32994153-32994250)
chr8 (144-205)||(16972019-16972080)
chr8 (161-205)||(32767475-32767519)
chr8 (172-207)||(10552934-10552969)
chr8 (144-247)||(18123295-18123398)
chr8 (169-248)||(29970848-29970927)
chr8 (144-247)||(32927961-32928064)
chr8 (144-191)||(43492206-43492253)
chr8 (169-207)||(22936818-22936856)
chr8 (169-207)||(31246340-31246378)
chr8 (160-206)||(33588757-33588803)
chr8 (170-248)||(38715193-38715271)
chr8 (169-207)||(43550937-43550975)
chr8 (144-205)||(36447703-36447764)
chr8 (169-206)||(36779437-36779474)
chr8 (169-234)||(38516344-38516409)
chr8 (163-204)||(38875211-38875252)
chr8 (63-106)||(5997374-5997418)
[»] chr7 (20 HSPs)
chr7 (147-247)||(40491650-40491750)
chr7 (161-246)||(15311189-15311274)
chr7 (144-209)||(40561709-40561774)
chr7 (171-211)||(26975305-26975345)
chr7 (145-205)||(45557435-45557495)
chr7 (150-204)||(18350120-18350174)
chr7 (173-247)||(42481803-42481877)
chr7 (161-205)||(29829324-29829368)
chr7 (163-207)||(38230121-38230165)
chr7 (169-207)||(42752203-42752241)
chr7 (169-207)||(48459769-48459807)
chr7 (169-206)||(4228606-4228643)
chr7 (170-207)||(10371970-10372007)
chr7 (144-205)||(12306792-12306853)
chr7 (170-207)||(20088929-20088966)
chr7 (143-204)||(22310415-22310476)
chr7 (144-205)||(27571931-27571992)
chr7 (58-126)||(45369107-45369176)
chr7 (145-205)||(38123621-38123681)
chr7 (171-207)||(44967411-44967447)
[»] chr2 (21 HSPs)
chr2 (144-204)||(15220817-15220877)
chr2 (161-206)||(3853939-3853984)
chr2 (144-205)||(16518847-16518908)
chr2 (169-248)||(12110921-12111000)
chr2 (169-211)||(11005710-11005752)
chr2 (169-207)||(23359953-23359991)
chr2 (178-234)||(3716571-3716627)
chr2 (169-205)||(10918650-10918686)
chr2 (144-211)||(32307153-32307220)
chr2 (177-248)||(40704682-40704753)
chr2 (169-207)||(1945062-1945100)
chr2 (169-207)||(23377551-23377589)
chr2 (169-211)||(31224727-31224769)
chr2 (171-248)||(10618862-10618939)
chr2 (170-207)||(30007576-30007613)
chr2 (169-206)||(34433330-34433367)
chr2 (169-206)||(42089552-42089589)
chr2 (172-232)||(1763270-1763330)
chr2 (161-205)||(4908876-4908920)
chr2 (169-205)||(8843060-8843096)
chr2 (173-205)||(21105561-21105593)
[»] chr4 (26 HSPs)
chr4 (144-211)||(22683933-22684000)
chr4 (160-248)||(39000531-39000619)
chr4 (169-247)||(38740287-38740365)
chr4 (150-248)||(43868211-43868309)
chr4 (144-205)||(33843780-33843841)
chr4 (169-206)||(36150627-36150664)
chr4 (171-248)||(48575480-48575557)
chr4 (163-204)||(54487248-54487289)
chr4 (145-205)||(25927376-25927436)
chr4 (64-126)||(2171738-2171801)
chr4 (144-203)||(17898085-17898144)
chr4 (183-254)||(24364098-24364169)
chr4 (144-211)||(25319117-25319184)
chr4 (172-211)||(46382869-46382908)
chr4 (169-207)||(16566328-16566366)
chr4 (169-207)||(22699765-22699803)
chr4 (169-207)||(22980727-22980765)
chr4 (169-207)||(22994314-22994352)
chr4 (169-211)||(41866177-41866219)
chr4 (169-211)||(52062999-52063041)
chr4 (169-206)||(14597650-14597687)
chr4 (170-207)||(28947774-28947811)
chr4 (143-211)||(1023867-1023935)
chr4 (176-236)||(12224459-12224519)
chr4 (171-207)||(33574203-33574239)
chr4 (171-207)||(54488630-54488666)
[»] chr6 (17 HSPs)
chr6 (147-209)||(882758-882820)
chr6 (148-254)||(1499973-1500079)
chr6 (172-211)||(25208723-25208762)
chr6 (139-248)||(3524989-3525098)
chr6 (143-247)||(8856375-8856479)
chr6 (190-242)||(9043722-9043774)
chr6 (171-211)||(20846423-20846463)
chr6 (143-199)||(34620954-34621010)
chr6 (143-199)||(34748391-34748447)
chr6 (143-205)||(434192-434254)
chr6 (169-211)||(16442371-16442413)
chr6 (169-207)||(16548177-16548215)
chr6 (169-206)||(7486524-7486561)
chr6 (150-206)||(8551118-8551175)
chr6 (166-206)||(3605777-3605817)
chr6 (169-209)||(6364574-6364614)
chr6 (169-205)||(29240407-29240443)
[»] chr1 (29 HSPs)
chr1 (169-207)||(29759713-29759751)
chr1 (182-236)||(47307505-47307559)
chr1 (170-247)||(13344836-13344913)
chr1 (144-205)||(34915135-34915196)
chr1 (144-205)||(35961437-35961498)
chr1 (169-233)||(4347036-4347100)
chr1 (150-206)||(7301834-7301890)
chr1 (171-211)||(7335901-7335941)
chr1 (144-255)||(12655314-12655424)
chr1 (143-205)||(5268287-5268349)
chr1 (150-207)||(44786871-44786928)
chr1 (169-245)||(3887364-3887439)
chr1 (171-211)||(32365143-32365183)
chr1 (144-195)||(213246-213297)
chr1 (168-247)||(40642990-40643069)
chr1 (144-199)||(48548975-48549030)
chr1 (169-207)||(1199889-1199927)
chr1 (169-207)||(20800303-20800341)
chr1 (161-207)||(33693088-33693134)
chr1 (169-207)||(35569228-35569266)
chr1 (169-207)||(40352453-40352491)
chr1 (169-207)||(48510970-48511008)
chr1 (171-205)||(50751256-50751290)
chr1 (144-205)||(7524182-7524243)
chr1 (173-250)||(26253024-26253101)
chr1 (177-205)||(3819719-3819747)
chr1 (172-255)||(18325296-18325377)
chr1 (145-205)||(42423142-42423202)
chr1 (169-205)||(47978389-47978425)
[»] scaffold0172 (1 HSPs)
scaffold0172 (169-248)||(15241-15320)
[»] chr5 (21 HSPs)
chr5 (161-244)||(29922986-29923069)
chr5 (169-211)||(2483732-2483774)
chr5 (169-211)||(2868371-2868413)
chr5 (161-199)||(4306598-4306636)
chr5 (169-207)||(22811078-22811116)
chr5 (171-204)||(24036627-24036660)
chr5 (172-232)||(5465398-5465458)
chr5 (172-232)||(6988217-6988277)
chr5 (63-126)||(10898672-10898736)
chr5 (147-211)||(10957205-10957268)
chr5 (144-211)||(28304821-28304888)
chr5 (169-207)||(19784865-19784903)
chr5 (169-207)||(22482241-22482279)
chr5 (173-207)||(35816985-35817019)
chr5 (54-123)||(38045390-38045460)
chr5 (143-232)||(10273268-10273357)
chr5 (62-126)||(29922575-29922640)
chr5 (165-206)||(40885259-40885300)
chr5 (169-206)||(43152386-43152423)
chr5 (171-247)||(14299422-14299498)
chr5 (146-254)||(14671096-14671203)
[»] scaffold0393 (1 HSPs)
scaffold0393 (61-126)||(12378-12444)
[»] scaffold0361 (1 HSPs)
scaffold0361 (143-199)||(14075-14131)
[»] scaffold0031 (2 HSPs)
scaffold0031 (170-211)||(99701-99742)
scaffold0031 (171-211)||(99918-99958)
[»] scaffold0009 (1 HSPs)
scaffold0009 (170-207)||(199394-199431)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-206)||(219691-219728)
[»] scaffold0024 (1 HSPs)
scaffold0024 (139-207)||(23546-23614)
[»] scaffold0015 (1 HSPs)
scaffold0015 (169-233)||(65538-65602)


Alignment Details
Target: chr3 (Bit Score: 507; Significance: 0; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 1 - 552
Target Start/End: Original strand, 38626582 - 38627133
Alignment:
Q  1 aattaaagacacacagaaaattatgtgtgtgtttcgtctcaattttggatggagcaaattttattttgacatgtttggatgtttccagtaaaattgattt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38626582 aattaaagacacacagaaaattatgtgtgcgtttcgtctcaattttggatggagcaaattttattttgacatgtttggatgtttccagtaaaattgattt 38626681  T
Q  101 tgcctcgggaattgattataacttgagacttgaatttgtatctttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  38626682 tgcctcgggaattgattataacttgagacttgaatttgtatctttcaactcacttccacgtgaatatgtccaaacataaatcatttcacattcaactcac 38626781  T
Q  201 ttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcacattcagttagagacaaatacacaagcaacttctatgcaatactgc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38626782 ttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcacattcagttagagacaaatacacaagcaacttctatgcaatactac 38626881  T
Q  301 tgttggaacttgcaatgacagcagacgagtcgggttaaacgaatcaaatacctgcaattgatgatcaatctccgtttccggatccctcatgtgatggcca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38626882 tgttggaacttgcaatgacagcagacgagtcgggttaaacgaatcaaatacctgcaattgatgatcaatctccgtttccggatccctcatgtgatggcca 38626981  T
Q  401 tgggtattaaaactaagcgaagnnnnnnncggaacaaaatacacatcaacaacctccggatccaaaacccttaccgcttcacttccattgccaccgccgt 500  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38626982 tgggtattaaaactaagcgaagaaaaaaacggaacaaaatacacatcaacaacctccggatccaaaacccttaccgcttcacttccattgccaccaccgt 38627081  T
Q  501 taagaagcgaacccatcatccagtactctacactatgctgcctcctcaaacc 552  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627082 taagaagcgaacccatcatccagtactctacactatgctgcctcctcaaacc 38627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 39658057 - 39657982
Alignment:
Q  173 aacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||| ||||||||||||||  |||||||| |||| || | ||||||||||||||| ||| |||||||||||    
T  39658057 aacataaattattttacattcaacgaacttttaagtaaaatcaattttacataatcaatttattcaaaatcaattt 39657982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 42644300 - 42644379
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcga-ctttacataatcaattcattaaaaatcaatt 247  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |  |||| | |||||||||| | ||||||||||    
T  42644300 tccaaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaatt 42644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 48089687 - 48089641
Alignment:
Q  163 aatgtgtccaaacataaatcattttacattcaactcacttttaacta 209  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  48089687 aatgtatccaatcataaatcattttacattcaactcacttttaacta 48089641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 30958105 - 30958209
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcat-tttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaat 242  Q
    ||||| |||||| ||| ||||| | ||||||||||||| |  |||||||||||||||| |||| | ||| || | |||||| |||||||||||| |||||    
T  30958105 ttcaattcacttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaat 30958204  T
Q  243 caatt 247  Q
    |||||    
T  30958205 caatt 30958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 30973917 - 30974021
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcat-tttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaat 242  Q
    ||||| |||||| ||| ||||| | ||||||||||||| |  |||||||||||||||| |||| | ||| || | |||||| |||||||||||| |||||    
T  30973917 ttcaattcacttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaat 30974016  T
Q  243 caatt 247  Q
    |||||    
T  30974017 caatt 30974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 7012678 - 7012716
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7012678 tccaaacataaatcactttacattcaactcacttttaac 7012716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 24916576 - 24916614
Alignment:
Q  167 tgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24916576 tgtctaaacataaatcattttacattcaactcactttta 24916614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 25129530 - 25129444
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcac 255  Q
    |||||||||||||||  |||||||||||||||||||| |   | || | ||||||  ||||||||||| || |||||||||||||||    
T  25129530 tccaaacataaatcacgttacattcaactcacttttatcctgaatcaattttacaacatcaattcattcaagatcaatttatgtcac 25129444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 31766238 - 31766160
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    ||||||||||||||| ||||  ||||||||||||||| | ||| |  | |||||| |||||||||||| ||||||||||    
T  31766238 tccaaacataaatcactttaacttcaactcacttttatccaaaattaattttacaaaatcaattcattcaaaatcaatt 31766160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 10852775 - 10852738
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaac 10852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 23918881 - 23918918
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaac 23918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 50664777 - 50664834
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||| |||  ||| ||||||||||||||| || ||||||||||||||||||||    
T  50664777 tcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactcacttttaac 50664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 1441417 - 1441362
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||| ||||||||||| || ||||| |||||| ||||| |||||||||||||||    
T  1441417 tcacttttacgtgaatgtatctaaacacaaatcactttacgttcaactcactttta 1441362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 25181239 - 25181326
Alignment:
Q  160 gtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    ||||| || ||||||||||||| |||||||||| |||||||||||||  ||| || | | |||| |||||||||| | || |||||||    
T  25181239 gtgaaggtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattctacaaaatcaattcaatcaatatcaatt 25181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 32112088 - 32112167
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||||||| | ||| ||||||||||| ||||| | | | || | ||||||||||||||||| | |||||||||||    
T  32112088 tccaaacataaattacttttcattcaactcatttttatccataatcaattttacataatcaattcactcaaaatcaattt 32112167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 40415359 - 40415312
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcga 216  Q
    ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  40415359 tccaaacataaattaatttacatccaactcacttttaactaaaatcga 40415312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 44225603 - 44225682
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||||||||| |||||||| |||||||||||||| ||| || | | |||| ||||||||   | |||||||||||    
T  44225603 tccaaacataaatcactttacattaaactcacttttaacgaaaatcaattctacaaaatcaattatattaaaatcaattt 44225682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 49158621 - 49158700
Alignment:
Q  176 ataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcac 255  Q
    ||||||||| ||| |||| | ||||||||| || || || | |||||| |||||||||||| ||||||||||||| ||||    
T  49158621 ataaatcatcttatattctagtcacttttatcttaaatcaattttacaaaatcaattcattcaaaatcaatttatatcac 49158700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 3776594 - 3776652
Alignment:
Q  147 aactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||| ||| | ||||| ||||| ||||||||| ||||||||||||||| |||||    
T  3776594 aactcacttttacatcaatgtatccaagcataaatcactttacattcaactcaatttta 3776652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 7899185 - 7899143
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||||| ||||||||||||||  ||||||||||||    
T  7899185 tccaaacataaatcgttttacattcaactatcttttaactaaa 7899143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 16246157 - 16246115
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| |||||||  ||||||||||||||||||    
T  16246157 tccaaacataaatcaatttacatctaactcacttttaactaaa 16246115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 23496355 - 23496393
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  23496355 tccaaacataaatcaattcacattcaactcacttttaac 23496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 41115353 - 41115275
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||||||||||| |||||||||||||||||| | ||| | ||| || | | |||| |||||||||||| | ||||||||    
T  41115353 tccaaacataaaccattttacattcaactcattgttagccaaaatcaattatacaaaatcaattcattcataatcaatt 41115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 52931635 - 52931593
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| |||||| | ||||||||||||||||||    
T  52931635 tccaaacataaatcaatttacactaaactcacttttaactaaa 52931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 31084245 - 31084282
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| || |||||||||||||||||||    
T  31084245 tccaaacataaatcaattcacattcaactcacttttaa 31084282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 34561131 - 34561184
Alignment:
Q  154 ttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||| || ||||| ||||||||||||||| ||  |||||||||||||||||||    
T  34561131 ttctaagtcaatgtatccaaacataaatcaattcgcattcaactcacttttaac 34561184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 41591361 - 41591308
Alignment:
Q  152 acttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||| ||| ||||||| ||||||||||||||| |||| |||||||||| |||||    
T  41591361 acttttacatgaatgtatccaaacataaatcactttaaattcaactcattttta 41591308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 49526740 - 49526695
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||| ||||||||||||||| |||||| |||| ||||||||||    
T  49526740 tgaatgtatccaaacataaatcaatttacaatcaattcacttttaa 49526695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 7262885 - 7262941
Alignment:
Q  146 caactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactt 202  Q
    |||||||||| ||| ||||||| || ||||||||| |||| ||| ||||||||||||    
T  7262885 caactcacttttacatgaatgtatcaaaacataaaacattataccttcaactcactt 7262941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 47278803 - 47278831
Alignment:
Q  171 caaacataaatcattttacattcaactca 199  Q
    |||||||||||||||||||||||||||||    
T  47278803 caaacataaatcattttacattcaactca 47278831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 2764485 - 2764419
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaa 210  Q
    |||||||||||| ||||||||||| |||||| |||||||| |||| |||||||| ||||||||||||    
T  2764485 ttcaactcacttttacgtgaatgtatccaaatataaatcactttatattcaacttacttttaactaa 2764419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 15206723 - 15206778
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||| || ||||| ||||||||||||||| || ||||||||||||||||||    
T  15206723 tcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcactttta 15206778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 19649232 - 19649270
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19649232 tccaaacataaatcactttacattcaactcacttttaac 19649270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 32994250 - 32994153
Alignment:
Q  152 acttctacgtgaatgtgtccaaacataaatca--ttttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||| ||| |||||| ||||||||||||||||  |||||| ||||||||||||| | | | | || | |||||||||||| |||||| ||||||||||    
T  32994250 acttttacatgaatgagtccaaacataaatcaaattttaccttcaactcactttcagccagaatcaattttacataatcagttcattcaaaatcaatt 32994153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 16972080 - 16972019
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||| |||||| ||| ||||||| | |||||| |||||||||||| |||||||||||||||    
T  16972080 ttcaaatcacttttacatgaatgtattcaaacacaaatcattttaccttcaactcactttta 16972019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 32767475 - 32767519
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  32767475 tgaatgtatccaaacataaatcaatttacatccaactcactttta 32767519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 10552969 - 10552934
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||| |||||||||||||||||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaac 10552934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 18123295 - 18123398
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatc 243  Q
    |||||||||||| ||| | ||| | | | |||| |||||||||||| ||||| |||||||||  || |||||| ||||||| ||||||||| |  |||||    
T  18123295 ttcaactcacttttacataaatatattccaacacaaatcattttaccttcaattcacttttagttagagtcgattttacatcatcaattcactctaaatc 18123394  T
Q  244 aatt 247  Q
    ||||    
T  18123395 aatt 18123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 29970848 - 29970927
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||||||||| |||| | |||||||||||||||||||| || | | |||| | |||||||  | |||||||||||    
T  29970848 tccaaacataaatcactttaaactcaactcacttttaactaaaatcaattatacaaattcaattctatcaaaatcaattt 29970927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 32927961 - 32928064
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatc 243  Q
    |||||||||||| ||| ||||||| |||||||| |||||| ||| | ||||||||| |||||   | | || | ||||||||||||||||  | ||||||    
T  32927961 ttcaactcacttttacatgaatgtatccaaacacaaatcactttgccttcaactcaattttagtaagaatcaattttacataatcaattccctcaaaatc 32928060  T
Q  244 aatt 247  Q
    ||||    
T  32928061 aatt 32928064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 43492253 - 43492206
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacat 191  Q
    ||||||| |||| ||| ||||||| |||||||||||||||||||||||    
T  43492253 ttcaacttacttttacatgaatgtatccaaacataaatcattttacat 43492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 22936856 - 22936818
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  22936856 tccaaacataaatcaattcacattcaactcacttttaac 22936818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 31246378 - 31246340
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  31246378 tccaaacataaatcaattcacattcaactcacttttaac 31246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 33588757 - 33588803
Alignment:
Q  160 gtgaatgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||| || ||||||||||||| |||||||||| |||||||||||||    
T  33588757 gtgaaggtatccaaacataaataattttacattaaactcacttttaa 33588803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 38715271 - 38715193
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    |||||||||||||| |||||| | |||||| ||||||||||| || | | | || |||||||||| | |||||||||||    
T  38715271 ccaaacataaatcactttacacttaactcaattttaactaaaatcaattctgcaaaatcaattcaattaaaatcaattt 38715193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 43550937 - 43550975
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  43550937 tccaaacataaatcaattcacattcaactcacttttaac 43550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 36447764 - 36447703
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||| || ||| | ||||| || ||||| ||||||||||| ||||||||||||||||    
T  36447764 ttcaactcagttatacataaatgtatctaaacacaaatcattttatattcaactcactttta 36447703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 36779437 - 36779474
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  36779437 tccaaacataaattactttacattcaactcacttttaa 36779474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 38516344 - 38516409
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattca 234  Q
    ||||||||||||||| ||||||||||||||||| ||| | ||| || | | |||| ||||||||||    
T  38516344 tccaaacataaatcactttacattcaactcactattatcgaaaatcaattctacaaaatcaattca 38516409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 38875252 - 38875211
Alignment:
Q  163 aatgtgtccaaacataaatcattttacattcaactcactttt 204  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  38875252 aatgtatccaaacataaatcactttacattgaactcactttt 38875211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 5997418 - 5997374
Alignment:
Q  63 attttgacatgtttggatg-tttccagtaaaattgattttgcctc 106  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  5997418 attttgacatgtttggatgtttttgagtaaaattgattttgcctc 5997374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 40491650 - 40491750
Alignment:
Q  147 aactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaat 246  Q
    ||||||||| ||| ||||||| |||||| |||||||| ||||| |||||||||||||||   ||| || | |||||| |||||||||| | |||||||||    
T  40491650 aactcacttttacatgaatgtatccaaaaataaatcactttaccttcaactcacttttagtcaaaatcaattttacagaatcaattcactcaaaatcaat 40491749  T
Q  247 t 247  Q
    |    
T  40491750 t 40491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 15311274 - 15311189
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaat 246  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||| | | || | |||||| ||||||||  || |||||||||    
T  15311274 tgaatgtatccaaacataaatcactatacattcaactcacttttaaccatattcaattttacacaatcaattagttcaaaatcaat 15311189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 40561774 - 40561709
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaacta 209  Q
    |||||||||||| ||| ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||    
T  40561774 ttcaactcacttttacatgaatgtatccaaacataaatcactttactttcaactcaatttttacta 40561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 26975345 - 26975305
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  26975345 caaacataaatcattttacattcaactcacttataactaaa 26975305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 45557435 - 45557495
Alignment:
Q  145 tcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||| ||| ||||||| |||||||| |||||| ||||| |||||||||||||||    
T  45557435 tcaactcacttttacatgaatgtatccaaacacaaatcactttaccttcaactcactttta 45557495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 18350174 - 18350120
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttt 204  Q
    |||||| | ||||||||| |  |||||||||||||||||||||||||||||||||    
T  18350174 tcactttttcgtgaatgtatgtaaacataaatcattttacattcaactcactttt 18350120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 42481877 - 42481803
Alignment:
Q  173 aacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    ||||||||||||||||||||||||||||||||    | | || | ||||||||||||||||| | ||||||||||    
T  42481877 aacataaatcattttacattcaactcactttttttcagaatcaattttacataatcaattcacttaaaatcaatt 42481803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 29829368 - 29829324
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  29829368 tgaatgtatccaaacataaatcactttacattcaactcattttta 29829324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 38230121 - 38230165
Alignment:
Q  163 aatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||    
T  38230121 aatgtatccaaacataaatcaattcacattcaactcacttttaac 38230165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 42752241 - 42752203
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  42752241 tccaaacataaatcaattcacattcaactcacttttaac 42752203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 48459769 - 48459807
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  48459769 tccaaacataaatcaattcacattcaactcacttttaac 48459807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 4228606 - 4228643
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  4228606 tccaaacataaatcacttttcattcaactcacttttaa 4228643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 10372007 - 10371970
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| || ||||||||||||||||||||    
T  10372007 ccaaacataaatcaattcacattcaactcacttttaac 10371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 12306792 - 12306853
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||| ||| ||||| |  |||||||||||||| ||||  |||||||||||||||    
T  12306792 ttcaactcacttttacatgaatctagccaaacataaatcactttatcttcaactcactttta 12306853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 20088929 - 20088966
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaac 20088966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 22310476 - 22310415
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttt 204  Q
    |||||| |||||| |||| |||||| |||||||||||||| |||||  ||||||||| ||||    
T  22310476 tttcaattcacttttacgagaatgtatccaaacataaatctttttatcttcaactcaatttt 22310415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 27571931 - 27571992
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||| | ||| | ||||| ||||| ||||||||||||||| || ||||||||||||    
T  27571931 ttcaactcacatttacataaatgtatccaaccataaatcattttacctttaactcactttta 27571992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 45369107 - 45369176
Alignment:
Q  58 attttattttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataacttga 126  Q
    |||| ||||||| ||||||||||||| || |||| |||||||||||| ||  ||||||||| ||||||||    
T  45369107 atttgattttgagatgtttggatgttctcaagtagaattgattttgcttctagaattgattttaacttga 45369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 38123681 - 38123621
Alignment:
Q  145 tcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||| ||| ||||||||||| |||| |||| | ||||| ||||||||| |||||    
T  38123681 tcaactcacttttacatgaatgtgtccgaacacaaattactttaccttcaactcaatttta 38123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 44967447 - 44967411
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||| || ||||||||||||||||||||    
T  44967447 caaacataaatcaattcacattcaactcacttttaac 44967411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 15220877 - 15220817
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttt 204  Q
    ||||||||||||  || ||||||| ||||||||||||||| ||||||||||||||||||||    
T  15220877 ttcaactcactttaacatgaatgtatccaaacataaatcactttacattcaactcactttt 15220817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 3853939 - 3853984
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3853939 tgaatgtatccaaacataaatcaatttacattcaactcacttttaa 3853984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 16518847 - 16518908
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||| ||| ||||||| |||||||| ||||||||||||  ||||||||||||||    
T  16518847 ttcaactcacttttacatgaatgtatccaaacacaaatcattttaccctcaactcactttta 16518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 12110921 - 12111000
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||||||||| |||| |||||||||||||||||| ||| || | || ||| |||||||||  | |||||||||||    
T  12110921 tccaaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaattt 12111000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 11005752 - 11005710
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  11005752 tccaaacataaatcattttacattcaagtcactattaactaaa 11005710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 23359991 - 23359953
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23359991 tccaaacataaatcactttacattcaactcacttttaac 23359953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 3716627 - 3716571
Alignment:
Q  178 aaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattca 234  Q
    |||||||||||| ||||||||| ||||||||||| |  |||||| ||||||||||||    
T  3716627 aaatcattttaccttcaactcatttttaactaaaataaactttagataatcaattca 3716571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 10918650 - 10918686
Alignment:
Q  169 tccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10918650 tccaaacataaatcactttacattcaactcactttta 10918686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 32307153 - 32307220
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||| || |||||| | |||||| ||||  |||||||||||| ||||| |||||||||||    
T  32307153 ttcaactcacttttatgtgaatttatccaaatataagccattttacattcgactcaattttaactaaa 32307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 40704682 - 40704753
Alignment:
Q  177 taaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||| ||||||||||| | | ||||||| ||| || | || |||||||||||||||| |||||||||||    
T  40704682 taaatcaatttacattcaaataaattttaaccaaaatcaatttcacataatcaattcattcaaaatcaattt 40704753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 1945100 - 1945062
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  1945100 tccaaacataaatcaattcacattcaactcacttttaac 1945062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 23377551 - 23377589
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  23377551 tccaaacataaatcaacttacattcaactcacttttaac 23377589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 31224727 - 31224769
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| || |||| |||||||||||||||||||    
T  31224727 tccaaacataaatcaattcacatccaactcacttttaactaaa 31224769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 10618939 - 10618862
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||| ||| ||||| ||||| ||| ||||| ||| | || | |||||| |||||||||| |||||||||||||    
T  10618939 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 10618862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 30007613 - 30007576
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| || ||||||||||||||||||||    
T  30007613 ccaaacataaatcaattcacattcaactcacttttaac 30007576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 34433367 - 34433330
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| || |||||||||||||||||||    
T  34433367 tccaaacataaatcaattcacattcaactcacttttaa 34433330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 42089589 - 42089552
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| || |||||||||||||||||||    
T  42089589 tccaaacataaatcaattcacattcaactcacttttaa 42089552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1763270 - 1763330
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaatt 232  Q
    |||||||||||| |||| |||||||||| ||||||| ||| || | |||||| ||||||||    
T  1763270 aaacataaatcactttaaattcaactcaattttaaccaaaatcaattttacaaaatcaatt 1763330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 4908876 - 4908920
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||| ||||||||||||||| |||||||  ||||||||||||    
T  4908876 tgaatgtatccaaacataaatcactttacatgaaactcactttta 4908920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 8843060 - 8843096
Alignment:
Q  169 tccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||||||||||||||||||| || |||||    
T  8843060 tccaaacataaatcattttacattcaacccaatttta 8843096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 21105561 - 21105593
Alignment:
Q  173 aacataaatcattttacattcaactcactttta 205  Q
    ||||||||||||||||||||||| |||||||||    
T  21105561 aacataaatcattttacattcaattcactttta 21105593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 22683933 - 22684000
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||| ||| ||| | |||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  22683933 ttcaactcgcttttacataaatgtgtccaaacataaaccattttactttcaactcacttttaagtaaa 22684000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 39000619 - 39000531
Alignment:
Q  160 gtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||| || |||||||||||||||||||  ||| | |||||||||||||||| || | | |||| |||||||||| | |||||||||||    
T  39000619 gtgaaggtatccaaacataaatcattttttattaagctcacttttaactaaactcaattctacaaaatcaattcaatcaaaatcaattt 39000531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 38740365 - 38740287
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    ||||||||||||||| || |  ||||||||||||||| | ||| || | |||||| |||||||||||| ||||||||||    
T  38740365 tccaaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaatcaattcattcaaaatcaatt 38740287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 43868211 - 43868309
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    |||||| ||| | ||||| |||||| | |||||| ||||| ||||||| ||||||||||| | |  | |||||| |||||||||||| |||||||||||    
T  43868211 tcacttttacataaatgtatccaaagacaaatcactttactttcaacttacttttaactagaattaattttacaaaatcaattcattcaaaatcaattt 43868309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 33843780 - 33843841
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||  ||| ||||| | ||||||||||||||| ||||||| |||||||||||||    
T  33843780 ttcaactcactattacatgaatatatccaaacataaatcactttacatccaactcactttta 33843841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 36150627 - 36150664
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36150627 tccaaacataaatcactttacattcaactcacttttaa 36150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 48575480 - 48575557
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    |||| ||||| |||||||||||||||||| ||||| | ||| || | |||||| |||||||||||| ||||| |||||    
T  48575480 caaaaataaaccattttacattcaactcatttttatcaaaaatcaattttacaaaatcaattcattcaaaattaattt 48575557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 54487289 - 54487248
Alignment:
Q  163 aatgtgtccaaacataaatcattttacattcaactcactttt 204  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  54487289 aatgtatccaaacataaatcaatttacattcaactcactttt 54487248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 25927376 - 25927436
Alignment:
Q  145 tcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||| |||||| ||||||||||| || ||| ||||| |||||||| |||||||||||||||    
T  25927376 tcaattcacttttacgtgaatgtatcgaaatataaaacattttactttcaactcactttta 25927436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 2171738 - 2171801
Alignment:
Q  64 ttttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataacttga 126  Q
    |||||||||||||||||||| || ||||||||||| |||||| | ||||||||||  |||||||    
T  2171738 ttttgacatgtttggatgttctcgagtaaaattgactttgcccccggaattgattcgaacttga 2171801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 17898144 - 17898085
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttt 203  Q
    ||||| |||||| ||| | ||| | ||||||||||||||| |||||||||||||||||||    
T  17898144 ttcaattcacttttacctaaatatatccaaacataaatcactttacattcaactcacttt 17898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 24364169 - 24364098
Alignment:
Q  183 attttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtca 254  Q
    ||||||||||||| |||||||||   | | || | ||||||||||||||||||| ||||||||||| |||||    
T  24364169 attttacattcaaatcacttttagtgagaatcaattttacataatcaattcattcaaaatcaatttttgtca 24364098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 25319117 - 25319184
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||| ||||| ||||| || |||||||||  | ||||||||||||| |||||||| ||||    
T  25319117 ttcaactcacttttacgtaaatgtatcgaaacataaaaaactttacattcaacttacttttaagtaaa 25319184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 46382869 - 46382908
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  46382869 aaacataaatcattttacattcaacttacttttatctaaa 46382908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 16566328 - 16566366
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  16566328 tccaaacataaatcaattcacattcaactcacttttaac 16566366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 22699765 - 22699803
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22699765 tccaaacataaatcactttacattcaacttacttttaac 22699803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 22980765 - 22980727
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22980765 tccaaacataaatcactttacattcaacttacttttaac 22980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 22994352 - 22994314
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22994352 tccaaacataaatcactttacattcaacttacttttaac 22994314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 41866177 - 41866219
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| || |||| |||||||||||||||||||    
T  41866177 tccaaacataaatcaattcacatccaactcacttttaactaaa 41866219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 52063041 - 52062999
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||| |||||||||||| || ||||||||||||||||||    
T  52063041 tccaaacagaaatcattttaccttaaactcacttttaactaaa 52062999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 14597687 - 14597650
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  14597687 tccaaacataaatcacttttcattcaactcacttttaa 14597650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 28947811 - 28947774
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaac 28947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 1023935 - 1023867
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||||  || | ||| | |||||||| |||||| ||||| ||||||||||||||| |||||    
T  1023935 tttcaactcactttcacatcaatatatccaaacaaaaatcactttaccttcaactcacttttagctaaa 1023867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 12224459 - 12224519
Alignment:
Q  176 ataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcatt 236  Q
    |||||| ||||| ||||||||| ||||||||||||| |  | |||||| ||||||||||||    
T  12224459 ataaattattttgcattcaacttacttttaactaaaataaattttacaaaatcaattcatt 12224519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 33574203 - 33574239
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||| || ||||||||||||||||||||    
T  33574203 caaacataaatcaattcacattcaactcacttttaac 33574239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 54488630 - 54488666
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||| || ||||||||||||||||||||    
T  54488630 caaacataaatcaattcacattcaactcacttttaac 54488666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 882758 - 882820
Alignment:
Q  147 aactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaacta 209  Q
    ||||||||| | | ||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  882758 aactcacttttgcatgaatgtatccaaacataaatcattttaccttcaactcaattttaacta 882820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 1499973 - 1500079
Alignment:
Q  148 actcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||||||| ||| | ||||| | ||||||||||||| |||||| ||||||| |||||| | ||| || | |||||| |||||||||| | ||||||||||    
T  1499973 actcacttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaattttacaaaatcaattcagtcaaaatcaatt 1500072  T
Q  248 tatgtca 254  Q
    | |||||    
T  1500073 tttgtca 1500079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 25208723 - 25208762
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  25208723 aaacataaatcattttacattcaactcacttttaattaaa 25208762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 3524989 - 3525098
Alignment:
Q  139 tatctttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaa 238  Q
    |||| ||||||| |||| ||| | ||||| | |||| ||||| || ||| ||||||||||||||||| | | | || | ||||||||||||||||||| |    
T  3524989 tatcgttcaactgacttttacataaatgtattcaaatataaaccagtttgcattcaactcacttttagccacaatcaattttacataatcaattcattca 3525088  T
Q  239 aaatcaattt 248  Q
    |||| |||||    
T  3525089 aaattaattt 3525098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 8856375 - 8856479
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaat 242  Q
    |||||||||||||  || ||||||| |||||||| |||||||||||| ||||||  ||||||||  ||| || | || |||| |||||||  || |||||    
T  8856375 tttcaactcactttcacatgaatgtatccaaacacaaatcattttaccttcaaccaacttttaataaaattcaatttgacatgatcaattttttcaaaat 8856474  T
Q  243 caatt 247  Q
    |||||    
T  8856475 caatt 8856479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 9043774 - 9043722
Alignment:
Q  190 attcaactcacttttaactaaagtcgactttacataatcaattcattaaaaat 242  Q
    |||||||||||||||||||||| || | | |||| ||||||||||||||||||    
T  9043774 attcaactcacttttaactaaaatcaattatacaaaatcaattcattaaaaat 9043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 20846423 - 20846463
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  20846423 caaacataaatcattttacattctactcatttttaactaaa 20846463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 34620954 - 34621010
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactca 199  Q
    ||||||||||||| ||| | ||||| ||||||||||||||| ||||| |||||||||    
T  34620954 tttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaactca 34621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 34748391 - 34748447
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactca 199  Q
    ||||||||||||| ||| | ||||| ||||||||||||||| ||||| |||||||||    
T  34748391 tttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaactca 34748447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 434254 - 434192
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||||| |||  |||| | |||||||| |||||||||||| | |||||||||||||    
T  434254 tttcaactcacttttacacgaatatatccaaacacaaatcattttacctgcaactcactttta 434192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 16442413 - 16442371
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| || ||||||||||||||| ||||||||    
T  16442413 tccaaacataaatcaattcacattcaactcacttgtaactaaa 16442371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 16548177 - 16548215
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  16548177 tccaaacataaatcaattcacattcaactcacttttaac 16548215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 7486524 - 7486561
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||||||||| || |||||||||||||    
T  7486524 tccaaacataaatcattttaccttaaactcacttttaa 7486561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8551175 - 8551118
Alignment:
Q  150 tcacttcta-cgtgaatgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||| ||| || |||||||||||||||||| ||| || |||||||||||||||    
T  8551175 tcacttctatcgtaaaggtgtccaaacataaatcacttttcactcaactcacttttaa 8551118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 3605817 - 3605777
Alignment:
Q  166 gtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    |||||||||||||||||| ||| || |||||||||||||||    
T  3605817 gtgtccaaacataaatcacttttcactcaactcacttttaa 3605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 6364614 - 6364574
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaacta 209  Q
    ||||||||||||||||||||| || || |||||||||||||    
T  6364614 tccaaacataaatcattttaccttaaattcacttttaacta 6364574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 29240443 - 29240407
Alignment:
Q  169 tccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||||| | |||||||||||||||||||||    
T  29240443 tccaaacataaatgaatttacattcaactcactttta 29240407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 29759713 - 29759751
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29759713 tccaaacataaatcattttacattcaactcacttttaac 29759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 47307505 - 47307559
Alignment:
Q  182 cattttacattcaactcacttttaactaaagtcgactttacataatcaattcatt 236  Q
    ||||||||||||||||||||||||||||||||| | |||| | ||||||||||||    
T  47307505 cattttacattcaactcacttttaactaaagtcaattttataaaatcaattcatt 47307559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 13344836 - 13344913
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||||||||||||| ||||| ||||||||||||||||| ||| || | | |||| |||||||||| | ||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattctacaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 34915135 - 34915196
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||| | |||||||||||||    
T  34915135 ttcaactcacttttacatgaatgtattcaaacataaatcattttacctgcaactcactttta 34915196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 35961437 - 35961498
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||| ||| ||||||| |  |||||||||||||||||| |||||||||||||||    
T  35961437 ttcaactcacttttacatgaatgtatagaaacataaatcattttaccttcaactcactttta 35961498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 4347036 - 4347100
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattc 233  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| || | | |||| |||||||||    
T  4347036 tccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctacaaaatcaattc 4347100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 7301890 - 7301834
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    |||||| |||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  7301890 tcacttttacgtgaatgttaccaaatataaatcattttacattcaaatcacttttaa 7301834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 7335941 - 7335901
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  7335941 caaacataaatcactttacattcaactcacttttaactaaa 7335901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 12655314 - 12655424
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatc 243  Q
    |||||||||||| ||| ||||| | || ||||||| | |||| |||||||||||| ||||||| |||| || | || |||||||||||||||  ||||||    
T  12655314 ttcaactcactt-tacatgaatttatctaaacatagaccattctacattcaactcgcttttaagtaaaatcaatttcacataatcaattcatctaaaatc 12655412  T
Q  244 aatttatgtcac 255  Q
     |||| ||||||    
T  12655413 tatttttgtcac 12655424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 5268287 - 5268349
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||||||||||| ||| ||||| | | |||||| |||||| |||||||||||||||||||||    
T  5268287 tttcaactcacttttacatgaatatattcaaacaaaaatcactttacattcaactcactttta 5268349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 44786928 - 44786871
Alignment:
Q  150 tcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||| ||| ||||||| | | ||||||||||||||||||||||||||| |||||||    
T  44786928 tcacttttacatgaatgtattcgaacataaatcattttacattcaactcatttttaac 44786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 3887439 - 3887364
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaa 245  Q
    |||||||||||| ||||||||||| ||||||| |||| ||||| || | |||||| || ||||||||| ||||||||    
T  3887439 tccaaacataaaacattttacattgaactcacctttatctaaaatc-attttacaaaaccaattcattcaaaatcaa 3887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 32365143 - 32365183
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  32365143 caaacataaatcaatttacattcaactcacttttgactaaa 32365183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 213297 - 213246
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaa 195  Q
    |||||||||||| ||| || |||| ||||||||||||||| |||||||||||    
T  213297 ttcaactcacttttacatgcatgtatccaaacataaatcactttacattcaa 213246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 40642990 - 40643069
Alignment:
Q  168 gtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||||||||||||||| |||||||||||||  || ||| | ||| || | |||||| |||||||||| | ||||||||||    
T  40642990 gtccaaacataaatcactttacattcaacttgctcttatccaaaatcaattttacagaatcaattcactcaaaatcaatt 40643069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 48549030 - 48548975
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactca 199  Q
    |||||||||||| ||| | ||||| || |||||||||||||||||| |||||||||    
T  48549030 ttcaactcacttttacataaatgtatcaaaacataaatcattttaccttcaactca 48548975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 1199889 - 1199927
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  1199889 tccaaacataaatcaattcacattcaactcacttttaac 1199927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 20800341 - 20800303
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  20800341 tccaaacataaatcaattcacattcaactcacttttaac 20800303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 33693088 - 33693134
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||| ||||||||||||||| ||||| |||||||| ||||||||    
T  33693088 tgaatgtatccaaacataaatcactttacgttcaactcgcttttaac 33693134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 35569266 - 35569228
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  35569266 tccaaacataaatcaattcacattcaactcacttttaac 35569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 40352453 - 40352491
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  40352453 tccaaacataaatcactttacattaaactcacttttaac 40352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 48510970 - 48511008
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  48510970 tccaaacataaatcaattcacattcaactcacttttaac 48511008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 50751290 - 50751256
Alignment:
Q  171 caaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||||||||||||| ||||||||||||    
T  50751290 caaacataaatcattttacatttaactcactttta 50751256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 7524182 - 7524243
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    |||||||||||| ||| | |||||||||||||| |||||| ||||| || | ||||||||||    
T  7524182 ttcaactcacttttacataaatgtgtccaaacacaaatcactttaccttgagctcactttta 7524243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 26253101 - 26253024
Alignment:
Q  173 aacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttat 250  Q
    ||||||||| ||||||| ||||||||| ||||||    | |||| |||||| |||||||||||| |||| ||||||||    
T  26253101 aacataaatgattttactttcaactcatttttaaaccgaatcgattttacagaatcaattcattcaaaaccaatttat 26253024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 3819719 - 3819747
Alignment:
Q  177 taaatcattttacattcaactcactttta 205  Q
    |||||||||||||||||||||||||||||    
T  3819719 taaatcattttacattcaactcactttta 3819747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 18325377 - 18325296
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcac 255  Q
    ||||| ||| ||||||||||||||||||||||||  |||| || | |||||| || ||||||||  |||| |||||| ||||||    
T  18325377 aaacagaaaccattttacattcaactcacttttatgtaaaatcaattttacaaaaccaattcat--aaaaccaatttttgtcac 18325296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 42423202 - 42423142
Alignment:
Q  145 tcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcactttta 205  Q
    ||||| ||||| |||||||| |||| ||| |||||| || |||| ||||||||||||||||    
T  42423202 tcaacccacttttacgtgaacgtgttcaatcataaaccactttatattcaactcactttta 42423142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 47978425 - 47978389
Alignment:
Q  169 tccaaacataaatcattttacattcaactcactttta 205  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  47978425 tccaaccataaatcactttacattcaactcactttta 47978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 15320 - 15241
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaattt 248  Q
    ||||||||||||||| |||| |||||||||||||||||| ||| || | || ||| |||||||||  | |||||||||||    
T  15320 tccaaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaattt 15241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 29922986 - 29923069
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatca 244  Q
    ||||||| ||||||||||||| | || ||||||||||||||| ||   ||| || | ||||||||||||||||||| |||||||    
T  29922986 tgaatgtatccaaacataaattacttcacattcaactcacttatagtcaaaatcaattttacataatcaattcattcaaaatca 29923069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 2483774 - 2483732
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  2483774 tccaaacataaatcaattcacattcaactcacttttaactaaa 2483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 2868413 - 2868371
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  2868413 tccaaacttaaatcactttacattcaactcacttttaactaaa 2868371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 4306598 - 4306636
Alignment:
Q  161 tgaatgtgtccaaacataaatcattttacattcaactca 199  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  4306598 tgaatgtatccaaacataaatcattttacattcaactca 4306636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 22811078 - 22811116
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22811078 tccaaacataaatcactttacattcaactcacttttaac 22811116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 24036627 - 24036660
Alignment:
Q  171 caaacataaatcattttacattcaactcactttt 204  Q
    ||||||||||||||||||||||||||||||||||    
T  24036627 caaacataaatcattttacattcaactcactttt 24036660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 5465458 - 5465398
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaatt 232  Q
    |||||||||||||||| ||||||| ||||||||| ||||| || | |||||| ||||||||    
T  5465458 aaacataaatcatttttcattcaattcacttttatctaaaatcaattttacaaaatcaatt 5465398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6988217 - 6988277
Alignment:
Q  172 aaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaatt 232  Q
    ||||||||||||||||| |||||||| |||||||| |||| || | |||||| ||||||||    
T  6988217 aaacataaatcattttaaattcaacttacttttaattaaaatcaattttacaaaatcaatt 6988277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 10898672 - 10898736
Alignment:
Q  63 attttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataacttga 126  Q
    |||||||||||||||| || | || ||||||||||||||||||||  ||||||||| ||||||||    
T  10898672 attttgacatgtttggttgctctcgagtaaaattgattttgcctctagaattgattctaacttga 10898736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 10957268 - 10957205
Alignment:
Q  147 aactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||| ||||| |||||  | ||||||||||||||| |||||||| |||||||||||||||    
T  10957268 aactcacttgtacgtaaatgtaacaaaacataaatcattt-acattcaagtcacttttaactaaa 10957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 28304888 - 28304821
Alignment:
Q  144 ttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||| ||||  ||||||||| | |||||| |||||||||||  ||||||||||| |||||||||||    
T  28304888 ttcaacccactgttacgtgaatatatccaaatataaatcatttcccattcaactcatttttaactaaa 28304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 19784865 - 19784903
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||| || |||||||||||||||||||||||    
T  19784865 tccaaacataaaccactttacattcaactcacttttaac 19784903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 22482241 - 22482279
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  22482241 tccaaacataaatcaattcacattcaactcacttttaac 22482279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 35817019 - 35816985
Alignment:
Q  173 aacataaatcattttacattcaactcacttttaac 207  Q
    ||||||||| |||||||||||||||||||||||||    
T  35817019 aacataaattattttacattcaactcacttttaac 35816985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 38045390 - 38045460
Alignment:
Q  54 gcaaattttattttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataact 123  Q
    ||||| || ||||||||||||||| ||||| || |||| ||||||||||||||| || ||||||| |||||    
T  38045390 gcaaaattgattttgacatgtttgaatgttctcaagtagaattgattttgcctccggtattgattttaact 38045460  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 10273357 - 10273268
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaatt 232  Q
    ||||||| ||||| ||||  ||||| | ||| |||||||||||||| ||||||||||||| ||| |||| |  | |||||| ||||||||    
T  10273357 tttcaacccacttgtacgaaaatgtattcaagcataaatcattttatattcaactcacttataagtaaaattaattttacaaaatcaatt 10273268  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 29922575 - 29922640
Alignment:
Q  62 tattttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataacttga 126  Q
    ||||||||||||||||  |||| || |||| |||||||||||||||  ||||||||| ||||||||    
T  29922575 tattttgacatgtttgattgttctctagtagaattgattttgcctcaagaattgattttaacttga 29922640  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 40885259 - 40885300
Alignment:
Q  165 tgtgtccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||||||| || |||| ||||||||||||||    
T  40885259 tgtgtccaaacataaatcaattcacatccaactcacttttaa 40885300  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 43152423 - 43152386
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  43152423 tccaaacataaatcacttttcattcaactcacttttaa 43152386  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 14299422 - 14299498
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 247  Q
    |||||| |||||| ||||| ||||||||||||||| ||| | || | |||||| |||||||||| | ||||| ||||    
T  14299422 caaacacaaatcactttaccttcaactcacttttatctagaatcaattttacacaatcaattcactcaaaataaatt 14299498  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 14671096 - 14671203
Alignment:
Q  146 caactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaa 245  Q
    |||||||||| ||| ||||||  ||||||||||||| | || |||||||| ||||||||| | | | || | || ||| |||||||||||| |||||||     
T  14671096 caactcacttttacatgaatgcatccaaacataaat-acttcacattcaattcacttttagccataatcaatttcacaaaatcaattcattcaaaatcat 14671194  T
Q  246 tttatgtca 254  Q
    ||| |||||    
T  14671195 tttttgtca 14671203  T

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Target: scaffold0393 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 12444 - 12378
Alignment:
Q  61 ttattttgacatgtttggatgtt-tccagtaaaattgattttgcctcgggaattgattataacttga 126  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||  ||| ||||| ||||||||    
T  12444 ttattttgacatgtttggatgttctcaagtagaattgattttgcctccagaaatgattctaacttga 12378  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 14131 - 14075
Alignment:
Q  143 tttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactca 199  Q
    |||||||||||||  || ||||||| ||||||||||||||| ||||| |||||||||    
T  14131 tttcaactcactttcacatgaatgtatccaaacataaatcactttaccttcaactca 14075  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 99701 - 99742
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaactaaa 211  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  99701 ccaaacataaattaatttacattcaactcacttttaattaaa 99742  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 99918 - 99958
Alignment:
Q  171 caaacataaatcattttacattcaactcacttttaactaaa 211  Q
    ||||||||||| | |||||||||||||||||||||| ||||    
T  99918 caaacataaattaatttacattcaactcacttttaattaaa 99958  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 199431 - 199394
Alignment:
Q  170 ccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaac 199394  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 219691 - 219728
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaa 206  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  219691 tccaaacataaatcacttttcattcaactcacttttaa 219728  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 23614 - 23546
Alignment:
Q  139 tatctttcaactcacttctacgtgaatgtgtccaaacataaatcattttacattcaactcacttttaac 207  Q
    |||| |||||||||||| ||| | ||||  ||| |||||||| |  |||||||||||||||||||||||    
T  23614 tatcattcaactcacttttacttaaatgcatcctaacataaaccgctttacattcaactcacttttaac 23546  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 65538 - 65602
Alignment:
Q  169 tccaaacataaatcattttacattcaactcacttttaactaaagtcgactttacataatcaattc 233  Q
    ||||||||||||||| |||||||| |||||| ||||||| ||| || | || ||| |||||||||    
T  65538 tccaaacataaatcactttacattaaactcatttttaaccaaaatcaatttcacagaatcaattc 65602  T

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