View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21294_high_6 (Length: 498)
Name: NF21294_high_6
Description: NF21294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21294_high_6 |
 | |
|
| [»] scaffold0406 (1 HSPs) |
| | |
|
| [»] scaffold0713 (1 HSPs) |
| | |
|
| [»] scaffold0438 (2 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 183; Significance: 9e-99; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 193 - 480
Target Start/End: Complemental strand, 47050747 - 47050468
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
47050747 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
47050648 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
47050647 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattacaaagttttatgaattttcatggtacacttgattgtgaatttattat |
47050556 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
47050555 |
atttttatacagttactagccttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccttgtgtgtttcccttctagttg |
47050468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 16100706 - 16100985
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
16100706 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
16100805 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
16100806 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattacaaagttttatgaattctcatggtacacttgattgtgaatttattat |
16100897 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| |
|
|
| T |
16100898 |
atttttatacagttactagccttgttagttaaaaattagatttgagaaaaataaataatcgtgaccatgtgtgtttcccttctagttg |
16100985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 14660026 - 14660304
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||| |
|
|
| T |
14660026 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacttcttga |
14660125 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
14660126 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattagaaagttttatgaattttcatggtacacttgattgtgaatttattat |
14660217 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
14660218 |
atttttatacagttactagccttgtaagttaaaaattagatttga-aaaaaaaaataatcgtgcccttgtgtgtttcccttctagttg |
14660304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 185 - 480
Target Start/End: Complemental strand, 17653634 - 17653349
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| || |||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
17653634 |
ttaagtccgacttttatattctatttggatttgattatctcgattccttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
17653535 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
||||||||| ||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
17653534 |
cctcttgacgacatt--------gaaattctgatag--tcttatttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgag |
17653445 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
17653444 |
gttattatatttttatacggttactagccttgtaaattaaaaattagatttgagaagaataaataatcgtgcccttgtgtgtttcccttctagttg |
17653349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 14650235 - 14650513
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| | |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||| |
|
|
| T |
14650235 |
gatttttatattctatttggatttgactatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacttcttga |
14650334 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
14650335 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattaaaaagttttatgaattatcatggtacacttgattgtgaatttattat |
14650426 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
14650427 |
atttttatacagttactagccttgtaagttaaaaattagatttga-aaaaaaaaataatcgtgcccttgtgtgtttcccttctagttg |
14650513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 193 - 480
Target Start/End: Complemental strand, 29289312 - 29289024
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
|||| |||||||| ||||| |||| || ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
29289312 |
gattgttatattctatttggatttgattatctcgattccttttcattataatcaatttatatattttctttaaagttgtggatttggtttcacctcttga |
29289213 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| ||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
29289212 |
cgacatt--------gaaattttgttatagtcttatttggtttgataaaattacaaagttttatgaattttcatggtacacttgattgtgaatttattat |
29289121 |
T |
|
| Q |
393 |
atttttatatggttactagc---------ctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
29289120 |
atttttatacggttactagccttgtaagtcttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccttgtgtgtttcccttctagttg |
29289024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 387
Target Start/End: Complemental strand, 19657649 - 19657461
Alignment:
| Q |
193 |
gatttttatattcaatttgaattta-atcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttg |
291 |
Q |
| |
|
||||||||||||| ||||| |||| || || || ||||||||||||||| |||||||||||| ||||||| |||| |||| ||| || ||||||| |
|
|
| T |
19657649 |
gatttttatattctatttggatttctattatttcaattccttttcattatgtgtgatttctatattttctttaaggttgcggatttgggttgacctcttt |
19657550 |
T |
|
| Q |
292 |
acaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatg-gtatacttgattatgaattt |
387 |
Q |
| |
|
|||||||| | |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||| |
|
|
| T |
19657549 |
acaacattggg--------atttcgatataatcttatttggtttgataaatttacaaagttttttgaattttcatgtatacacttgattgtgaattt |
19657461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Complemental strand, 17478739 - 17478687
Alignment:
| Q |
427 |
attagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
17478739 |
attagatttgagaaag-taaataatcgtgcccttgtgcgtttcccttctagttg |
17478687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 193 - 480
Target Start/End: Complemental strand, 25478491 - 25478212
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
25478491 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
25478392 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
25478391 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattacgaagttttatgaattttcatggtacacttgattgtgaatttattat |
25478300 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||| |||||| |
|
|
| T |
25478299 |
atttttatacagttactagccttgtaagttaaaaattatatttgagaaaagtaaaaaatcgtgcccttgtgtgtttcccttctagttg |
25478212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 195 - 480
Target Start/End: Original strand, 28040664 - 28040942
Alignment:
| Q |
195 |
tttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28040664 |
tttttatattatatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttgacg |
28040763 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattata- |
393 |
Q |
| |
|
||||| |||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
28040764 |
acatt--------gaaattttgatatagtcttatttagtttgataaaattacaaagttttatgaattttcatggtacacttgattgtgaatttattatat |
28040855 |
T |
|
| Q |
394 |
tttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
28040856 |
tttttatacagttactagccttgtaagttaaaaattagatttgagaaaaataaataatcgtgtccttgtgtgtttcccttctagttg |
28040942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 185 - 480
Target Start/End: Original strand, 22013924 - 22014209
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| || |||||||||| ||||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
22013924 |
ttaagtccgacttttatattctatttggatttgattatctcgatttcttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
22014023 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
||||||||| ||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
22014024 |
cctcttgacgacatt--------gaaattctgatag--tcttatttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgag |
22014113 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
22014114 |
tttattatatttttatacggttactagtcttgtaaattaaaaattagatttgagaagaataaataatcgtgcccttgtgtgtttcccttctagttg |
22014209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 193 - 473
Target Start/End: Original strand, 33055601 - 33055870
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
33055601 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
33055700 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||| |
|
|
| T |
33055701 |
caacatt--------gaaattttgatatagtcttatttggtttgataaaattacaaagttttatgaattttcatggtacactt---tgtgaatttattat |
33055789 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttccctt |
473 |
Q |
| |
|
|||||||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |
|
|
| T |
33055790 |
atttttattcagttattagccttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccatatgtgtttccctt |
33055870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 193 - 442
Target Start/End: Original strand, 27527203 - 27527444
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
27527203 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
27527302 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
27527303 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattagaaagttttatgaattttcatggtacacttgattgtgaatttattat |
27527394 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaa |
442 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27527395 |
atttttatacagttactagccttgtaagttaaaaattagatttgagaaaa |
27527444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 326 - 470
Target Start/End: Original strand, 33063205 - 33063346
Alignment:
| Q |
326 |
tatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaa |
425 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
33063205 |
tatttggtttgataaaattacaaagttttatgaattttcatggtacactt---tgtgaatttattatatttttatacagttactagccttgtaagttaaa |
33063301 |
T |
|
| Q |
426 |
aattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcc |
470 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || |||||||| |
|
|
| T |
33063302 |
aattagatttgagaaaaataaataatcgtgcccatgcgtgtttcc |
33063346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 304 - 478
Target Start/End: Original strand, 27684088 - 27684262
Alignment:
| Q |
304 |
cattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatg |
403 |
Q |
| |
|
||||| |||||| ||||| | |||||||||||||| || |||| | ||||| |||||||||||| | ||| |||| ||| ||||| ||||||||||| | |
|
|
| T |
27684088 |
cattggaattttaatatacttttatttggtttgattaagttacgatgttttccgaattttcatggcacactcgattgtgagtttatcatatttttatacg |
27684187 |
T |
|
| Q |
404 |
gttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
| ||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
27684188 |
ggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgctcttgtgtgtttcccttctagt |
27684262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 478
Target Start/End: Original strand, 27691407 - 27691581
Alignment:
| Q |
304 |
cattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatg |
403 |
Q |
| |
|
||||| |||||| ||||| | |||||||||||||| || ||| | ||||| |||||||||||| | ||| |||| ||| ||||| ||||||||||| | |
|
|
| T |
27691407 |
cattggaattttaatatacttttatttggtttgattaagttaagatgttttccgaattttcatggcacactcgattgtgagtttatcatatttttatacg |
27691506 |
T |
|
| Q |
404 |
gttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
| ||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
27691507 |
ggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgctcttgtgtgtttcccttctagt |
27691581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 33062984 - 33063090
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
33062984 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
33063083 |
T |
|
| Q |
293 |
caacatt |
299 |
Q |
| |
|
| ||||| |
|
|
| T |
33063084 |
cgacatt |
33063090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 193 - 399
Target Start/End: Original strand, 27650961 - 27651160
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
|||| ||||| || ||||| |||| || || | ||||||||||||||||| |||||||||||| |||||||||||| ||| ||| |||||||||| |
|
|
| T |
27650961 |
gattgttatagtctatttggatttgattatttggattccttttcattatacatgatttctatatttcctttaaagttgttgatttggattcacctcttac |
27651060 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtata--cttgattatgaatttatt |
390 |
Q |
| |
|
|| ||||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
27651061 |
gaa---------attgatattttgatatagtattatttgatttgataaatttacaaaattttctgaattttcatggtatactcttgattgtgaatttatt |
27651151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 310 - 473
Target Start/End: Original strand, 6952290 - 6952452
Alignment:
| Q |
310 |
aattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttact |
409 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||| |||||| ||| |||||||||||||| |||| ||| ||| ||||||| ||||||||| ||||| | |
|
|
| T |
6952290 |
aattttgatatagtcttatttggtttgataaattcacaaagattttcgaattttcatggtacactttattgtgagtttattacatttttatacggttagt |
6952389 |
T |
|
| Q |
410 |
agcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttccctt |
473 |
Q |
| |
|
| | | ||| || |||||| |||||||||||| ||||| |||||||||||||||||| |||| |
|
|
| T |
6952390 |
aactttgtaaatt-aaaatttgatttgagaaaaggaaataatcgtgcccttgtgtgttttcctt |
6952452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 364 - 478
Target Start/End: Original strand, 17357635 - 17357749
Alignment:
| Q |
364 |
catggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtg |
463 |
Q |
| |
|
||||||||||| |||| ||| ||||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17357635 |
catggtatactcgattgtgagtttatcatatttttatacaggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccttgtg |
17357734 |
T |
|
| Q |
464 |
tgtttcccttttagt |
478 |
Q |
| |
|
||||| |||| |||| |
|
|
| T |
17357735 |
tgttttccttctagt |
17357749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 194 - 480
Target Start/End: Complemental strand, 15970657 - 15970382
Alignment:
| Q |
194 |
atttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgac |
293 |
Q |
| |
|
|||||||||||| ||||| |||| || || ||||| |||||||||||| |||||||||||| | |||||||||||||| ||| ||||||| | || |
|
|
| T |
15970657 |
atttttatattcgatttggatttgattatttcgat-ccttttcattatggatgatttctatattctaattaaagttgtggatttgggttcacctttgtac |
15970559 |
T |
|
| Q |
294 |
aacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattata |
393 |
Q |
| |
|
| ||||| |||||||| || | ||||||||||||||||| |||||||||||| ||||||||| |||| ||| |||||||| || |||||| |
|
|
| T |
15970558 |
--------gacattgcgattttgatgtagtcttatttggtttgataaagttacaaagttttccgaattttcaaggtacactagattatgagttgattata |
15970467 |
T |
|
| Q |
394 |
tttttatatggttactagcctcataagttaaaaattagatttgagaaaaataa-atagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||| || ||||| | ||| || ||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||| |
|
|
| T |
15970466 |
tttttatacgggtacta--tttgtaaatt-aaaattagatttgagaaaagtaatttaatcgtgcccttgtgtgttgcccttctagttg |
15970382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 369
Target Start/End: Original strand, 17355375 - 17355540
Alignment:
| Q |
196 |
ttttatattcaatttgaatttaatcatctcgattcctttt-cattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||||||||| ||||| |||| || || |||||||||||| ||||||| ||||| ||||||| ||||||||||||||||| ||| ||||| || | || |
|
|
| T |
17355375 |
ttttatattctatttggatttgattatttcgattcctttttcattatacgcgatt-ctatattttctttaaagttgtggatttgggttcacttccttac- |
17355472 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggt |
369 |
Q |
| |
|
| ||||| |||||| ||||| | ||||||||||||||||| |||| | ||||| ||||||||||||| |
|
|
| T |
17355473 |
-------gacattggaattttaatatacttttatttggtttgataaagttacgatgttttccgaattttcatggt |
17355540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 167; Significance: 3e-89; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 19434968 - 19435247
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
19434968 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
19435067 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
19435068 |
cgacatt--------gaaattttgatatagtcttatttggtttgataaaattacaaagttttatgaattttcatggtacacttgattgtgaatttattat |
19435159 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||| |
|
|
| T |
19435160 |
atttttatacagttactagccttgaaagttaaaaattagatttgagaaaaataaataatcgtgtccttttgcgtttcccttctagttg |
19435247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 185 - 480
Target Start/End: Original strand, 28103769 - 28104056
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||| |
|
|
| T |
28103769 |
ttaagcctgatttttatattctatttggatttgattatctcgattccttttcattataatcaatttatatattttctttaaagttgtggatttggtttca |
28103868 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
||||||||| ||||| || ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
28103869 |
cctcttgacgacatt--------gagattttgatatagtcttatttggtttgataaaattacaaagttttatgaattttcatggtacacttgatggtgaa |
28103960 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
28103961 |
tttattatatttttatacagttactagccttgaaagtaaaaaattagatttgagataaataaataatcgtgcccttgtgtgtttcccttctagttg |
28104056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 185 - 480
Target Start/End: Complemental strand, 28069116 - 28068834
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
28069116 |
ttaagtccgatttttatattctatttggatttgattatctcgattccttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
28069017 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
| ||||||| ||||| |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
28069016 |
cttcttgacgacatt--------gaaattttgatag--tcttatttggtttgatagatttacaaagttttatgaattttcatggtac---tgattgtgag |
28068930 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
28068929 |
tttattatatttttatacggttactagccttgtaaattaaaaattagatttgagaaaaataaatattcgtgcccttgtgtgtttcccttctagttg |
28068834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 185 - 480
Target Start/End: Complemental strand, 28058691 - 28058409
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
28058691 |
ttaagtccgatttttatattctatttggatttgattatctcgattccttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
28058592 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
| ||||||| ||||| |||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
28058591 |
cttcttgacgacatt--------gaaattctgatag--tcttatttggtttgatagatttacaaagttttatgaattttcatggtac---tgattgtgag |
28058505 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
28058504 |
tttattatatttttatacggttactagccttgtaaattaaaaattagatttgagaaaaataaatattcgtgcccttgtgtgtttcccttctagttg |
28058409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 193 - 480
Target Start/End: Complemental strand, 6911564 - 6911281
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggttt-cacctcttg |
291 |
Q |
| |
|
||||||||||||| ||||| | || || |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
6911564 |
gatttttatattctatttggacttgattatctcgattctttttcattataatcgatttatatattttctttaaagttgtggatttggttttcacctcttg |
6911465 |
T |
|
| Q |
292 |
acaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttatta |
391 |
Q |
| |
|
|| || | |||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
6911464 |
acgac-----gacattgaaattctgatatagccttatttggtttgataaaattaccaagttttatgaattttcatggtacacttgattgcgaatttatta |
6911370 |
T |
|
| Q |
392 |
tatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||| |
|
|
| T |
6911369 |
tatttttatacagttactagccttgtaagttaaaaattagatttgagaaaaataactattcgtgccattgtgtgtttcccttctagttg |
6911281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 375
Target Start/End: Original strand, 11200699 - 11200834
Alignment:
| Q |
232 |
ttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgacaacattttgtcattgaaattttgatataatattatttg |
331 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| |||| | ||| |||||||||||||| || ||||| | |||||||||||| | ||||||| |
|
|
| T |
11200699 |
ttttcattatactcgatttatatatttcctttatagttattgatttggtttcacctctttacgacatt--------ggaattttgatatagttttatttg |
11200790 |
T |
|
| Q |
332 |
gtttgataaatttacaaagttttatgaattttcatggtatactt |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11200791 |
gtttgataaatttacaaagttttatgaattttcatggtatactt |
11200834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 185 - 473
Target Start/End: Complemental strand, 5519712 - 5519434
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
5519712 |
ttaagtccgatttttatattctatttggatttgattatctcgattccttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
5519613 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
|||||||| ||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
5519612 |
cctcttgaagacatt--------gaaattctgatag--tcttatttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgag |
5519523 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttccctt |
473 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5519522 |
tttattatatttttatacggttactagccttgtaaattaaaaattagatttgagaaaaataaataatcgtgcccttgtgtgtttccctt |
5519434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 195 - 480
Target Start/End: Original strand, 42785455 - 42785729
Alignment:
| Q |
195 |
tttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||||||||| ||||| |||| || |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
42785455 |
tttttatattttatttggatttgattatctcgattcattttcattataatcgatttctatattttctttaaagttgtggatttgatttcacctcttgacg |
42785554 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatat |
394 |
Q |
| |
|
||||| |||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
42785555 |
acatt--------gaaattccgatag--tcttgtttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgagttg-ttatat |
42785643 |
T |
|
| Q |
395 |
ttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||||||||||||||||| ||| || |||||| |||||||||||||||| |||||| |
|
|
| T |
42785644 |
ttttatacggttactagccttgtaaattaaaaattagatttgagaaaagtaactaatcgtgctcttgtgtgtttcccttctagttg |
42785729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 372
Target Start/End: Original strand, 15598659 - 15598829
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || || ||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||| | |
|
|
| T |
15598659 |
gatttttatattctatttggatttgattatttcgattccttt-cattatacgcgatttctatattttctttaaagttgtggatttggattcacctcttta |
15598757 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtata |
372 |
Q |
| |
|
| | |||||| ||||||||||| | |||||| |||||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
15598758 |
c--------gacattgagattttgatatagtcttatttcgtttgataaatttaaaaggttttatgaattttcatgttata |
15598829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 27198431 - 27198374
Alignment:
| Q |
310 |
aattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatg |
367 |
Q |
| |
|
|||||||||||| | |||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
27198431 |
aattttgatatagtcatatttggtttaataaatttacaaagttttctgaattttcatg |
27198374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 480
Target Start/End: Original strand, 15599016 - 15599063
Alignment:
| Q |
433 |
tttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
15599016 |
tttgagaaaagtaaataatcgtgcccatgtgtgtttcccttctagttg |
15599063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 193 - 480
Target Start/End: Complemental strand, 4763727 - 4763445
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
4763727 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttggtttcacctcttga |
4763628 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| || | |||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4763627 |
cgac-----gacattgaaattctgatatagccttatttggtttgataaaattaccaagttttatgaattttcatggtacacttgattgcgaatttattat |
4763533 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||| |
|
|
| T |
4763532 |
atttttatacagttactagccttgtaagttaaaaattagatttgagaaaaataactattcgtgccattgtgtgtttcccttctagttg |
4763445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 246 - 480
Target Start/End: Complemental strand, 27561317 - 27561091
Alignment:
| Q |
246 |
gatttctatattatctttaaagttgtggatctggtttcacctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaattta |
345 |
Q |
| |
|
||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
27561317 |
gatttatatattttctttaaagttgtggatttggtttcacctcttgacgacatt--------gaaattttgatatagtcttatttggtttgataaaatta |
27561226 |
T |
|
| Q |
346 |
caaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaata |
445 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27561225 |
caaagttttatgaattttcatggtacacttgattgtgaatttattatatttttataccgttactagccttgtaagttaaaaattagatttgagaaaaata |
27561126 |
T |
|
| Q |
446 |
aatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||| |
|
|
| T |
27561125 |
aataatcgtgcccttgtgtgtttcccttctagttg |
27561091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 311 - 478
Target Start/End: Complemental strand, 11512925 - 11512759
Alignment:
| Q |
311 |
attttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttacta |
410 |
Q |
| |
|
||||||| ||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| | | ||| |
|
|
| T |
11512925 |
attttgacatagtcttatttggtttgataaagttacaaagttttccgaattttcatggtatacttgattgtgagtttattatatttttatacgcgtgcta |
11512826 |
T |
|
| Q |
411 |
gcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
| || ||| || ||||||||||||||||||| ||| || ||| |||||||||||||||||||||||| |
|
|
| T |
11512825 |
tcttcgtaaatt-aaaattagatttgagaaaagtaattaatcgcgcccttgtgtgtttcccttttagt |
11512759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 27561397 - 27561332
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgattt |
250 |
Q |
| |
|
||||||| || |||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |
|
|
| T |
27561397 |
ttaagtccgacttttatattctatttggatttgattatctcgattccttttcattataatcgattt |
27561332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 8164542 - 8164473
Alignment:
| Q |
336 |
gataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggtta |
407 |
Q |
| |
|
|||||| ||||||| ||| ||||||||||||||| |||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
8164542 |
gataaaattacaaa--tttgtgaattttcatggtacacttgattgtaaatttattatatttttatacggtta |
8164473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 5358722 - 5358666
Alignment:
| Q |
312 |
ttttgatataatattatttggtttgataaatttacaaagttttatgaattttcatgg |
368 |
Q |
| |
|
|||||||||| | || |||||||| ||||||||| |||||||||||| ||||||||| |
|
|
| T |
5358722 |
ttttgatatagtcttgtttggtttaataaatttataaagttttatgagttttcatgg |
5358666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 11513039 - 11512948
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcac |
285 |
Q |
| |
|
||||||||||||| ||||| |||| || || |||||||||||||||||| ||||| | |||| ||||||||||||||||| ||| ||||| |
|
|
| T |
11513039 |
gatttttatattctatttggatttgattatttcgattccttttcattatgcatgattt-tttattttctttaaagttgtggatttgggttcac |
11512948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 478
Target Start/End: Complemental strand, 5358635 - 5358581
Alignment:
| Q |
424 |
aaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||| ||||||||||||| ||| |||| |
|
|
| T |
5358635 |
aaaatttgatttgagaaaactaaataatcgtgtccttgtgtgtttctcttctagt |
5358581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 5358824 - 5358734
Alignment:
| Q |
195 |
tttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcac |
285 |
Q |
| |
|
||||||||||| ||||| |||| || || | ||||||| |||||||| || ||||||||||| ||||||||| || ||| ||||||||| |
|
|
| T |
5358824 |
tttttatattctatttggatttgattattttcattccttctcattatactctatttctatatttgctttaaagtggtagatttggtttcac |
5358734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 40383358 - 40383404
Alignment:
| Q |
94 |
aacatgacagatattttgcaacatgagatattaaatttggctttcaa |
140 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||| |||||||||||||| |
|
|
| T |
40383358 |
aacatgagagatatttttcaatatgagatatttaatttggctttcaa |
40383404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 54352078 - 54351969
Alignment:
| Q |
246 |
gatttctatattatctttaaagttgtggatctggtttcacctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaattta |
345 |
Q |
| |
|
|||||||||| |||||||||| |||||||| ||||||||||| || || | |||| ||||||||||| | ||||||||||| ||||||||| |
|
|
| T |
54352078 |
gatttctatactatctttaaaattgtggatttggtttcacctttt-------ttacgatattggaattttgatatggtcttatttggtttaataaattta |
54351986 |
T |
|
| Q |
346 |
caaagttttatgaattt |
362 |
Q |
| |
|
|| |||||| ||||||| |
|
|
| T |
54351985 |
cacagttttctgaattt |
54351969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 478
Target Start/End: Complemental strand, 27733678 - 27733633
Alignment:
| Q |
433 |
tttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
||||||||| ||| ||| ||||||||||||||||||||||| |||| |
|
|
| T |
27733678 |
tttgagaaatatacataatcgtgcccttgtgtgtttcccttctagt |
27733633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 185 - 480
Target Start/End: Original strand, 44324032 - 44324317
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| || |||||||||| ||||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
44324032 |
ttaagtccgacttttatattctatttggatttgattatctcgatttcttttcattataatcgatttctatattttctttaaagttgtggatttgatttca |
44324131 |
T |
|
| Q |
285 |
cctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaa |
384 |
Q |
| |
|
||||||||| ||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
44324132 |
cctcttgacgacatt--------gaaattctgatag--tcttatttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgag |
44324221 |
T |
|
| Q |
385 |
tttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
44324222 |
tttattatatttttatacggttactagtcttgtaaattaaaaattagatttgagaagaataaataatcgtgcccttgtgtgtttcccttctagttg |
44324317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 246 - 480
Target Start/End: Original strand, 45332676 - 45332902
Alignment:
| Q |
246 |
gatttctatattatctttaaagttgtggatctggtttcacctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaattta |
345 |
Q |
| |
|
||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
45332676 |
gatttatatattttctttaaagttgtggatttggtttcacctcttgacgacatt--------gaaattttgatatagtcttatttggtttgataaaatta |
45332767 |
T |
|
| Q |
346 |
caaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaata |
445 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
45332768 |
caaagttttatgaattttcatggtacacttgattgtgaatttattatatttttatacagttactagccttgtaagttaaaaattagatttgagaaaagta |
45332867 |
T |
|
| Q |
446 |
aatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||| |||| |||||||||||||||||| |||||| |
|
|
| T |
45332868 |
aataatcgttcccttgtgtgtttcccttctagttg |
45332902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 478
Target Start/End: Original strand, 31713836 - 31714109
Alignment:
| Q |
196 |
ttttatattcaatttgaatttaatcatctcgattcctttt-cattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||||||||| ||||| |||| || || |||||||||||| ||||||| ||||| ||||||| ||||||| ||||||||| ||| ||||| || | ||| |
|
|
| T |
31713836 |
ttttatattctatttggatttgattatttcgattcctttttcattatacgcgatt-ctatattttctttaa-gttgtggatttgggttcacttccttaca |
31713933 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatat |
394 |
Q |
| |
|
||||| | |||||| ||||| | |||||||||||||| || |||| | ||||| |||||||||||| | ||| |||| ||| ||||| |||| |
|
|
| T |
31713934 |
acatt--------ggaattttaatatacttttatttggtttgattaagttacgatgttttccgaattttcatggcacactcgattgtgagtttatcatat |
31714025 |
T |
|
| Q |
395 |
ttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
||||||| || ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
31714026 |
ttttatacgggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccttgtgtgtttcccttctagt |
31714109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 304 - 478
Target Start/End: Complemental strand, 39154860 - 39154685
Alignment:
| Q |
304 |
cattgaaattttgatataatattatttggtttgataaatttacaaagttttat-gaattttcatggtatacttgattatgaatttattatatttttatat |
402 |
Q |
| |
|
||||| |||||| ||||| | |||||||||||||| || |||| | ||||| |||||||||||| | ||| |||| ||| ||||| ||||||||||| |
|
|
| T |
39154860 |
cattggaattttaatatacttttatttggtttgattaagttacgatgtttttccgaattttcatggcacactcgattgtgagtttatcatatttttatac |
39154761 |
T |
|
| Q |
403 |
ggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
|| ||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
39154760 |
gggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgctcttgtgtgtttcccttctagt |
39154685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 2588117 - 2588198
Alignment:
| Q |
194 |
atttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggat |
275 |
Q |
| |
|
|||||||||||| ||||| |||| || |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
2588117 |
atttttatattctatttggatttgattatcttgattccttttcattataatcgatttatatattttctttaaagttgtggat |
2588198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 808909 - 808810
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttca |
284 |
Q |
| |
|
||||||| || |||||||||| ||||| |||| || |||||||||| ||||||||||| || |||||||||| |||||||| |||||||| ||| |||| |
|
|
| T |
808909 |
ttaagtccgacttttatattctatttggatttgattatctcgattctttttcattatacgcggtttctatattttctttaaaattgtggatttgggttca |
808810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 45331962 - 45332019
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgattt |
250 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||| |
|
|
| T |
45331962 |
gatttttatattctatttggatttgattatctcgattccttttcattataatcgattt |
45332019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 4406347 - 4406400
Alignment:
| Q |
427 |
attagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||||||||||||| || ||||||| ||||||||||||||| |||||| |
|
|
| T |
4406347 |
attagatttgagaaaaataactattcgtgccattgtgtgtttcccttctagttg |
4406400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 480
Target Start/End: Complemental strand, 808765 - 808633
Alignment:
| Q |
347 |
aaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataa |
446 |
Q |
| |
|
|||| ||| |||||||||| |||| ||||| || || ||||||||||||||||| ||||| || | ||| |||||| ||||||||||||||| ||| |
|
|
| T |
808765 |
aaagatttctgaattttcacggtacacttgtttgggagtttattatatttttatacggttaataattttgtaaattaaaa-ttagatttgagaaaagtaa |
808667 |
T |
|
| Q |
447 |
atagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|| |||||| |||||| ||||||| | |||||| |
|
|
| T |
808666 |
ctaatcgtgctcttgtgggtttcccctctagttg |
808633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 155; Significance: 4e-82; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 18982382 - 18982660
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| ||| || ||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
18982382 |
gatttttatattctattgga-tttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggattgggtttcacctcttga |
18982480 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| |||||||||| ||| | ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||| ||||||| |
|
|
| T |
18982481 |
cgacatt--------gaaattttgacatagtcttatttggtttgataaaattacaaagttttatgaatttccatggtacacttgattgtgaacttattat |
18982572 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
18982573 |
atttttatatagttactagccttgtaagttaaaaattcgatttgagaaaaataaataatcgtgcccttgggtgtttcccttctagttg |
18982660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 195 - 480
Target Start/End: Complemental strand, 4706877 - 4706606
Alignment:
| Q |
195 |
tttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
4706877 |
tttttatattttatttggatttgattatctcgattccttttcattataatcgatttctatattttctttaaagttgtggatttgatttcacctcttgaca |
4706778 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatat |
394 |
Q |
| |
|
||||| |||||| ||| | || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
4706777 |
acatt--------gaaatt-----atagtcttgtttggtttgataaatttacaaagttttatgaattttcatggtacacttgattgtgagttg-ttatat |
4706692 |
T |
|
| Q |
395 |
ttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||||||||||||||||| ||| || |||||| |||||||||||||||| |||||| |
|
|
| T |
4706691 |
ttttatacggttactagccttgtaaattaaaaattagatttgagaaaagtaactaatcgtgctcttgtgtgtttcccttctagttg |
4706606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 311 - 480
Target Start/End: Complemental strand, 28603234 - 28603066
Alignment:
| Q |
311 |
attttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttacta |
410 |
Q |
| |
|
||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| | ||||| ||| ||||| ||||||||||| || || || |
|
|
| T |
28603234 |
attttgatatacttttatttggtttgataaagttacaaagttttctgaattttcatggtacatttgatcgtgagtttatcatatttttatacgggtatta |
28603135 |
T |
|
| Q |
411 |
gcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|| | ||| || ||||||||||||||||||| ||| || |||||| |||||||||||||||| |||||| |
|
|
| T |
28603134 |
gctttgtaaatt-aaaattagatttgagaaaagtaactaatcgtgctcttgtgtgtttcccttctagttg |
28603066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 26340602 - 26340512
Alignment:
| Q |
310 |
aattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtata--cttgattatgaatttattatattttt |
398 |
Q |
| |
|
|||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
26340602 |
aattttgatatattcttatttgatttgataaatttacaaagttttctgaattttcatggtatactcttgattgtgagtttattatattttt |
26340512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 197 - 478
Target Start/End: Complemental strand, 26917567 - 26917296
Alignment:
| Q |
197 |
tttatattcaatttgaatttaatcatctcgattcctttt-cattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgacaa |
295 |
Q |
| |
|
||||||||| ||||| |||| || || |||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||| ||||| |||| || |
|
|
| T |
26917567 |
tttatattctatttggatttgattatttcgattcctttttcattatacgcgatttctatattttctttaaagttgtggatttgggttcacttctttac-- |
26917470 |
T |
|
| Q |
296 |
cattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatt |
395 |
Q |
| |
|
| ||||| ||||||| |||| | |||||| ||||| ||| ||| ||| ||| |||||||||| |||| ||||| || ||| ||||||||||| |
|
|
| T |
26917469 |
------gacattggaattttggtatagtcttattt-gtttgtgaaactta-taagatttctgaattttcacggtacacttgtttgtgagtttattatatt |
26917378 |
T |
|
| Q |
396 |
tttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagt |
478 |
Q |
| |
|
|||| | ||||| || | | ||| | |||||| |||||||||||| |||| | ||||||||||||||||||||||| |||| |
|
|
| T |
26917377 |
tttacacggttagtaactttgtaa-atcaaaatttgatttgagaaaagtaaagaatcgtgcccttgtgtgtttcccttctagt |
26917296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 480
Target Start/End: Original strand, 15925033 - 15925179
Alignment:
| Q |
333 |
tttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggttactagcctcataagttaaaaattaga |
432 |
Q |
| |
|
||||||||||||| |||| ||| |||||||||| ||| ||||| || || ||||||||||||||||| ||||| || | | ||| || |||||| || |
|
|
| T |
15925033 |
tttgataaatttataaagatttctgaattttcacagtacacttgtttgagagtttattatatttttatacggttaataactttgtaaatt-aaaatttga |
15925131 |
T |
|
| Q |
433 |
tttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||| ||||||| |||||| |
|
|
| T |
15925132 |
tttgagaaaagtaaataatcgtgccgttgtgtgcttcccttctagttg |
15925179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 15924891 - 15924982
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattcctttt-cattataatcgatttctatattatctttaaagttgtggat |
275 |
Q |
| |
|
||||||| |||||||| |||| ||||| |||| || || |||||||||||| || |||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
15924891 |
ttaagtccgatttttacattctatttggatttgattatttcgattcctttttcactatatgcgatttctatattttctttaaaattgtggat |
15924982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0406 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0406
Description:
Target: scaffold0406; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 3615 - 3891
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttga |
292 |
Q |
| |
|
||||||||||||| || ||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
3615 |
gatttttatattctatgtgaatttgattatctcgattccttttcattataatcgatttatatattttctttaaagttgtggatttagtttcacctcttga |
3714 |
T |
|
| Q |
293 |
caacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattat |
392 |
Q |
| |
|
| ||||| ||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
3715 |
cgacatt--------gaaatttg---atagtcttatttggtttgataaaattacgaagttttatgaattttcatggtacatttgattgtgaatttattat |
3803 |
T |
|
| Q |
393 |
atttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||| ||||||||||| ||| |||||||||| ||||||||||| |||| | ||||||||||||||||||||||| |||||| |
|
|
| T |
3804 |
atttttatacagttactagccttgtaaattaaaaattatatttgagaaaagtaaaaaatcgtgcccttgtgtgtttcccttctagttg |
3891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0713 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0713
Description:
Target: scaffold0713; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 480
Target Start/End: Original strand, 780 - 955
Alignment:
| Q |
304 |
cattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatg |
403 |
Q |
| |
|
||||| |||||| ||||| | ||||||||||||||||| |||| | ||||| ||||||||||| | ||| |||| ||| || || ||||||||||| | |
|
|
| T |
780 |
cattggaattttaatatacttttatttggtttgataaagttacgatgttttcctaattttcatggcacactcgattgtgagtt-atcatatttttatacg |
878 |
T |
|
| Q |
404 |
gttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
| ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
879 |
ggtactagctttgtaagttaaaaattagatttgagaaaaataaataatcgtgcccttgtgtgtttcccttctagttg |
955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0438 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0438
Description:
Target: scaffold0438; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 195 - 480
Target Start/End: Complemental strand, 7884 - 7606
Alignment:
| Q |
195 |
tttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttgaca |
294 |
Q |
| |
|
|||| |||||| ||||| |||| || || ||||||| ||||||| ||| | |||||||||| ||||||||||||| ||| ||| |||||||||| || |
|
|
| T |
7884 |
ttttcatattctatttggatttgattatttcgattcattttcatcatacccagtttctatattttctttaaagttgttgatttggattcacctcttacca |
7785 |
T |
|
| Q |
295 |
acattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtata--cttgattatgaatttattat |
392 |
Q |
| |
|
||||| |||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
7784 |
---------cattggaattttgatatattcttatttgatttgataaatttacaaagttttctgaattttcatggtatattcttgattgtgagtttattat |
7694 |
T |
|
| Q |
393 |
attttt-atatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||| | || ||||||| | | ||| || ||||| | ||||||||||| ||||| |||| |||||||||||||||||| |||||| |
|
|
| T |
7693 |
atttttaaaattgttactaactttgtaaatt-aaaatcatatttgagaaaagaaaataatcgtacccttgtgtgtttcccttctagttg |
7606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0438; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 10763 - 10673
Alignment:
| Q |
310 |
aattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtata--cttgattatgaatttattatattttt |
398 |
Q |
| |
|
|||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
10763 |
aattttgatatattcttatttgatttgataaatttacaaagttttctgaattttcatggtatactcttgattgtgagtttattatattttt |
10673 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 60505 - 60786
Alignment:
| Q |
193 |
gatttttatattcaatttgaatttaatcatctcgattccttttcattataatcgatttctatattatctttaaagttgtggatctggtttcacctcttg- |
291 |
Q |
| |
|
|||| |||||||| ||||| |||| || || |||||||||||||||||| | |||||| ||||| |||||||||||| |||| ||| ||||||| || |
|
|
| T |
60505 |
gattgttatattctatttggatttgattatttcgattccttttcattatgcttgatttcgatattttctttaaagttgcggatttggattcacctttttt |
60604 |
T |
|
| Q |
292 |
acaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttat--gaattttcatggtatacttgattatgaatttat |
389 |
Q |
| |
|
|| |||||| || ||||||||||| | ||||||||||||||||| ||| ||||||| | ||||||||||| | ||||||| ||| ||||| |
|
|
| T |
60605 |
acgacattt-gt-------attttgatatagtcttatttggtttgataaaactaccaagttttttacgaattttcatgagacacttgatcgtgagtttat |
60696 |
T |
|
| Q |
390 |
tatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||| || ||||||| | ||| |||| | ||||||||||||||| ||| || ||||||||||||||||||||||| |||||| |
|
|
| T |
60697 |
aatatttttatacgggtactagctttgtaaattaata-ttagatttgagaaaagtaattaatcgtgcccttgtgtgtttcccttctagttg |
60786 |
T |
|
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Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 36264365 - 36264288
Alignment:
| Q |
311 |
attttgatataatattatttggtttgataaatttacaaagttttatgaattttcatg-gtatacttgattatgaattt |
387 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||| || |||||||| ||||||| |
|
|
| T |
36264365 |
atttcgatataatcttatttggtttgataaatttataaagttttctgaattttcatgtatacacttgattgtgaattt |
36264288 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 480
Target Start/End: Original strand, 28803513 - 28803798
Alignment:
| Q |
185 |
ttaagtctgatttttatattcaatttgaatttaatcatctcgattcctttt-cattataatcgatttctatattatctttaaagttgtggatctggtttc |
283 |
Q |
| |
|
||||||| ||||||||| || ||||| |||| || || |||||||||||| ||||||| ||||||||||||| |||||||| |||||||| ||| ||| |
|
|
| T |
28803513 |
ttaagtccaatttttatactctatttggatttgattatttcgattcctttttcattatatgcgatttctatattctctttaaaattgtggatttgggttc |
28803612 |
T |
|
| Q |
284 |
acctcttgacaacattttgtcattgaaattttgatataatattatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatga |
383 |
Q |
| |
|
| | || || | ||||| ||||||| | | |||||| ||||||||||||| |||| ||| |||||||||| ||| ||||| || || |
|
|
| T |
28803613 |
atttttttac--------gacattggaattttggtttggccttattt-atttgataaatttataaagatttctgaattttcacggtgcacttgtttggga |
28803703 |
T |
|
| Q |
384 |
atttattatatttttatatggttactagcctcataagttaaaaattagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
||||||||||||||||| | ||| || | | ||| | |||||| |||||||||||| |||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
28803704 |
gtttattatatttttatacgtttaataactttgtaa--ttaaaatttgatttgagaaaagtaaataatcgtgcccttgtgtatttcccttctagttg |
28803798 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 473
Target Start/End: Complemental strand, 36264224 - 36264179
Alignment:
| Q |
427 |
attagatttgagaaaaataaatagtcgtgcccttgtgtgtttccctt |
473 |
Q |
| |
|
|||||||||||||||| |||||| |||||| |||||||||||||||| |
|
|
| T |
36264224 |
attagatttgagaaaa-taaataatcgtgctcttgtgtgtttccctt |
36264179 |
T |
|
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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 29467106 - 29467028
Alignment:
| Q |
325 |
ttatttggtttgataaatttacaaagttttatgaattttcatggtatacttgattatgaatttattatatttttatatggt |
405 |
Q |
| |
|
||||||| || |||||||||| ||| ||||||||||| ||||||| |||||||| | |||||||| ||||||| ||||| |
|
|
| T |
29467106 |
ttatttgattggataaatttataaa--tttatgaatttccatggtacacttgattgttgatttattaaatttttacatggt |
29467028 |
T |
|
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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 479
Target Start/End: Complemental strand, 412980 - 412928
Alignment:
| Q |
427 |
attagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagtt |
479 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||||||||||||||||||||| |
|
|
| T |
412980 |
attagatttgagaaaagtaattatccgtgcccttgtgtgtttcccttttagtt |
412928 |
T |
|
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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Complemental strand, 424352 - 424299
Alignment:
| Q |
427 |
attagatttgagaaaaataaatagtcgtgcccttgtgtgtttcccttttagttg |
480 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||| |||||||||||||||| |
|
|
| T |
424352 |
attagatttgagaaaagtaattatcggtgcccttgtgcgtttcccttttagttg |
424299 |
T |
|
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