View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21294_low_10 (Length: 492)
Name: NF21294_low_10
Description: NF21294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21294_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 1 - 477
Target Start/End: Original strand, 33914581 - 33915057
Alignment:
| Q |
1 |
aattcccatttgaatgtctatcctatttgtagtgaattttgagctttggcctgcaagtatatagcaaaaggttagtatactaacagaatcttttaaaact |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
33914581 |
aattcctatttgaatgtctatcctatttgtagtgaattttgagctttggcctgcaagtatatagcaaaaggttaatatactaacagaatcttttaaaact |
33914680 |
T |
|
| Q |
101 |
tacacttgtgtcttttagattggttccacagtatgatccttttcatgattttaagaacttgtcactctttttctgtcattactggctctgtggcccatat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33914681 |
tacacttgtgtcttttagattggttccacagtatgatccttttcatgattttaagaatttgtcactctttttctgtcattactggctctgtggcccatat |
33914780 |
T |
|
| Q |
201 |
gcttagcctaatttgaaggccaattaattgctgtggacttgcagtgtcaaaaccacttcattttccacatgcatagacgttgatttaattaaaaatagaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33914781 |
gcttagcctaatttgaaggccaattaattgctgtggacttgcagtttcaaaaccacttcattttccacatgcatagacgttgatttaattaaaaatagaa |
33914880 |
T |
|
| Q |
301 |
agaggaagnnnnnnnntgtagagttcataattgttaatattagcaacaggacaaaacttaaattgcattgaaggcagtgggatcacatagtaattgggca |
400 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33914881 |
agaggaagaaaaaaaatgtagagttcataattgttaatattagcaacaggacaaaacttaaattgcattgaaggcagtgggatcacatagtaattgggca |
33914980 |
T |
|
| Q |
401 |
ataacaatgatttagtaggctgtctctttagtcttccacgtaatttggcttagttttcttcatagctgacttgtttg |
477 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33914981 |
ataacaatgatttagtaggctgtctctttagtcttccacgtaatttggcttagttttcttcatagctgacttgtttg |
33915057 |
T |
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