View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21294_low_22 (Length: 311)
Name: NF21294_low_22
Description: NF21294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21294_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 20070389 - 20070631
Alignment:
| Q |
20 |
ctaccaagggaaacttattgataattaggaaaacccataccagatccttaatgagtacgtggacatgagcctacaaacttgaaaattttaataaggttcg |
119 |
Q |
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| T |
20070389 |
ctaccaaggggaacttattgataattaggaaaacccatacaagatc-ttaatgagtacgtggacatgagcctacaaacttgaaaaattaaataaggttcg |
20070487 |
T |
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| Q |
120 |
cattatgaggattttgaatgccttaaaat-gaagttataccacaattaaatgaccaacatacccacaatgactatagtcatttgtaagtcaactctacaa |
218 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20070488 |
cattatgaggattttgaatgccttaaaattgaagttataccacaattaaatcaccaacatacccacaatgactatagtcatttgtaagtcaactctacaa |
20070587 |
T |
|
| Q |
219 |
gataataaatctggagttgcaaaatactaacaagtctattacta |
262 |
Q |
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|||||||||||||||||||||||||||||| || ||||| |||| |
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| T |
20070588 |
gataataaatctggagttgcaaaatactaataattctatcacta |
20070631 |
T |
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