View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21296_low_7 (Length: 240)
Name: NF21296_low_7
Description: NF21296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21296_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36167181 - 36166959
Alignment:
| Q |
1 |
taatgttagttttatccaacatatagagctcggatagtggatagttgaatgtttttctccatcaataattattctctctgtctcaactctcaaattacaa |
100 |
Q |
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| T |
36167181 |
taatgttagttttatccaacatatagagctcggatagtggatagttgaatgtttttctccatcaataattattctctctgtctcaactctcaaattacaa |
36167082 |
T |
|
| Q |
101 |
gttgtttcacttatccaaatgatttctctatggttcgaatatcatactatggcgacattaggttctatctttatagctatttgttgggagttttggagga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36167081 |
gttgtttcacttatccaaatgatttctctatggttcgaatatcatgctatggcgaaattaggttctatctttatagctatttgttgggagttttggagga |
36166982 |
T |
|
| Q |
201 |
atagaagtgatgaggttttttag |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
36166981 |
atagaagtgatgaggttttttag |
36166959 |
T |
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