View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21298_low_13 (Length: 285)

Name: NF21298_low_13
Description: NF21298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21298_low_13
NF21298_low_13
[»] chr4 (50 HSPs)
chr4 (1-269)||(53299932-53300201)
chr4 (129-251)||(9020970-9021092)
chr4 (129-214)||(40422996-40423081)
chr4 (129-229)||(32648927-32649027)
chr4 (157-253)||(34236476-34236572)
chr4 (131-251)||(42777225-42777344)
chr4 (129-190)||(51431041-51431102)
chr4 (140-251)||(516090-516202)
chr4 (129-249)||(28880029-28880149)
chr4 (129-237)||(32060696-32060804)
chr4 (152-251)||(24682942-24683041)
chr4 (128-251)||(37756645-37756768)
chr4 (151-230)||(42759596-42759675)
chr4 (129-191)||(53013683-53013745)
chr4 (129-190)||(8828133-8828194)
chr4 (152-233)||(15498740-15498821)
chr4 (129-190)||(31530116-31530177)
chr4 (129-214)||(41495563-41495648)
chr4 (129-190)||(41844532-41844593)
chr4 (129-190)||(49936599-49936660)
chr4 (129-232)||(17115060-17115162)
chr4 (152-214)||(27143251-27143313)
chr4 (129-190)||(7182114-7182175)
chr4 (129-214)||(16535764-16535849)
chr4 (129-190)||(17873293-17873354)
chr4 (129-190)||(21730250-21730311)
chr4 (129-190)||(24291482-24291543)
chr4 (129-190)||(31340864-31340925)
chr4 (129-190)||(38317151-38317212)
chr4 (129-190)||(46669868-46669929)
chr4 (129-190)||(47669907-47669968)
chr4 (129-190)||(48830737-48830798)
chr4 (129-190)||(49404546-49404607)
chr4 (130-190)||(52594550-52594610)
chr4 (131-190)||(32579272-32579331)
chr4 (129-188)||(38366126-38366185)
chr4 (129-248)||(46176860-46176979)
chr4 (129-187)||(23708236-23708294)
chr4 (129-251)||(31428837-31428959)
chr4 (154-196)||(39421906-39421948)
chr4 (152-190)||(48620386-48620424)
chr4 (153-251)||(49668061-49668159)
chr4 (129-190)||(3126935-3126996)
chr4 (129-214)||(8827743-8827828)
chr4 (152-233)||(15451283-15451363)
chr4 (129-190)||(41363735-41363796)
chr4 (130-190)||(6836497-6836557)
chr4 (129-229)||(24662670-24662770)
chr4 (129-189)||(42954706-42954766)
chr4 (140-191)||(52554932-52554984)
[»] chr2 (51 HSPs)
chr2 (151-251)||(5002732-5002832)
chr2 (131-208)||(6584744-6584821)
chr2 (129-214)||(8555699-8555784)
chr2 (129-229)||(8410853-8410953)
chr2 (129-251)||(41503193-41503312)
chr2 (129-232)||(32950931-32951034)
chr2 (129-187)||(3022795-3022853)
chr2 (130-232)||(4666190-4666292)
chr2 (129-251)||(14166992-14167114)
chr2 (129-231)||(14385136-14385238)
chr2 (129-191)||(30265282-30265344)
chr2 (140-214)||(44656684-44656758)
chr2 (129-189)||(12963894-12963954)
chr2 (135-191)||(39913369-39913425)
chr2 (129-190)||(4042061-4042122)
chr2 (133-189)||(5972323-5972380)
chr2 (129-186)||(8757457-8757514)
chr2 (129-190)||(13765862-13765923)
chr2 (129-214)||(31899279-31899364)
chr2 (129-190)||(32243572-32243633)
chr2 (129-186)||(36030894-36030951)
chr2 (129-190)||(36567201-36567262)
chr2 (129-190)||(38293985-38294046)
chr2 (129-186)||(39670102-39670159)
chr2 (129-190)||(40357554-40357615)
chr2 (140-217)||(42946658-42946735)
chr2 (129-190)||(44020436-44020497)
chr2 (134-190)||(5193162-5193218)
chr2 (129-189)||(32761209-32761269)
chr2 (129-188)||(30523376-30523435)
chr2 (129-235)||(3038870-3038976)
chr2 (140-214)||(9087632-9087706)
chr2 (140-190)||(11522114-11522164)
chr2 (140-214)||(16465093-16465167)
chr2 (153-251)||(16813660-16813757)
chr2 (153-251)||(16852939-16853036)
chr2 (129-191)||(25955757-25955819)
chr2 (129-187)||(31550185-31550243)
chr2 (152-190)||(36574394-36574432)
chr2 (162-251)||(3737192-3737281)
chr2 (129-190)||(8990886-8990947)
chr2 (129-190)||(13767299-13767360)
chr2 (129-190)||(14008252-14008313)
chr2 (142-191)||(17514933-17514982)
chr2 (129-190)||(18018521-18018582)
chr2 (129-190)||(18780481-18780542)
chr2 (129-190)||(18826149-18826210)
chr2 (129-190)||(38023370-38023431)
chr2 (129-189)||(726046-726106)
chr2 (130-190)||(13767515-13767574)
chr2 (134-190)||(43100135-43100190)
[»] chr1 (56 HSPs)
chr1 (129-251)||(30543286-30543408)
chr1 (129-230)||(41432685-41432786)
chr1 (140-251)||(35619448-35619559)
chr1 (129-251)||(28848722-28848844)
chr1 (152-233)||(9315001-9315081)
chr1 (129-248)||(5970364-5970483)
chr1 (129-251)||(52073381-52073503)
chr1 (129-229)||(2175392-2175492)
chr1 (129-237)||(14153161-14153269)
chr1 (129-224)||(33579316-33579411)
chr1 (129-190)||(17675293-17675354)
chr1 (134-251)||(28748226-28748343)
chr1 (149-209)||(50162213-50162273)
chr1 (129-251)||(15463846-15463969)
chr1 (152-251)||(43036269-43036368)
chr1 (142-232)||(41427930-41428020)
chr1 (129-189)||(2493061-2493119)
chr1 (129-214)||(2925858-2925943)
chr1 (129-190)||(11017698-11017759)
chr1 (129-190)||(23871386-23871447)
chr1 (129-190)||(33991638-33991699)
chr1 (129-190)||(42161976-42162037)
chr1 (151-248)||(42333673-42333770)
chr1 (129-229)||(13061320-13061420)
chr1 (129-190)||(17688436-17688501)
chr1 (157-233)||(27102775-27102851)
chr1 (129-189)||(28217466-28217526)
chr1 (129-185)||(50097716-50097772)
chr1 (134-189)||(1071070-1071125)
chr1 (129-187)||(28773313-28773372)
chr1 (129-187)||(35604191-35604250)
chr1 (152-199)||(36668595-36668642)
chr1 (151-190)||(40243460-40243499)
chr1 (129-191)||(17416641-17416703)
chr1 (129-215)||(26345697-26345783)
chr1 (129-251)||(51246497-51246618)
chr1 (203-249)||(51847578-51847624)
chr1 (133-190)||(1278566-1278623)
chr1 (129-190)||(1523692-1523753)
chr1 (129-190)||(12293909-12293970)
chr1 (129-190)||(13255441-13255502)
chr1 (129-190)||(27500081-27500142)
chr1 (129-190)||(32299199-32299260)
chr1 (129-190)||(32300152-32300213)
chr1 (134-190)||(34141624-34141681)
chr1 (129-190)||(39889581-39889642)
chr1 (129-190)||(42488550-42488611)
chr1 (129-214)||(42806243-42806328)
chr1 (129-190)||(43530221-43530282)
chr1 (129-190)||(47206347-47206408)
chr1 (129-190)||(47905612-47905673)
chr1 (133-190)||(50402838-50402895)
chr1 (129-190)||(51303098-51303159)
chr1 (130-190)||(5883528-5883587)
chr1 (129-209)||(24436855-24436935)
chr1 (129-189)||(26757078-26757138)
[»] chr3 (51 HSPs)
chr3 (129-233)||(15499222-15499326)
chr3 (151-251)||(38401864-38401964)
chr3 (129-251)||(1132858-1132980)
chr3 (129-214)||(13638499-13638584)
chr3 (129-233)||(32858884-32858988)
chr3 (129-223)||(4247181-4247275)
chr3 (129-223)||(7302148-7302242)
chr3 (129-251)||(2420696-2420817)
chr3 (129-217)||(46891456-46891544)
chr3 (129-251)||(34306634-34306755)
chr3 (154-224)||(36598312-36598382)
chr3 (129-190)||(17642686-17642747)
chr3 (129-190)||(36796521-36796582)
chr3 (129-190)||(42583222-42583283)
chr3 (129-217)||(7965086-7965174)
chr3 (129-217)||(25428738-25428826)
chr3 (129-217)||(38515307-38515395)
chr3 (152-190)||(55115585-55115623)
chr3 (129-190)||(3333962-3334022)
chr3 (129-233)||(11500155-11500260)
chr3 (129-190)||(23163620-23163681)
chr3 (129-190)||(27681900-27681961)
chr3 (129-190)||(30131809-30131870)
chr3 (129-190)||(39499295-39499356)
chr3 (129-190)||(41961900-41961961)
chr3 (129-190)||(43007445-43007506)
chr3 (129-190)||(49860933-49860994)
chr3 (141-189)||(45898636-45898684)
chr3 (129-189)||(49304306-49304366)
chr3 (151-190)||(2927941-2927980)
chr3 (129-188)||(3043051-3043110)
chr3 (129-188)||(37545277-37545336)
chr3 (129-188)||(46312343-46312402)
chr3 (129-208)||(48444584-48444663)
chr3 (152-190)||(19148264-19148302)
chr3 (129-187)||(30121445-30121503)
chr3 (129-187)||(47434217-47434275)
chr3 (140-206)||(54089389-54089455)
chr3 (153-214)||(1339846-1339907)
chr3 (129-190)||(7661133-7661194)
chr3 (129-190)||(18257631-18257692)
chr3 (129-190)||(32708822-32708883)
chr3 (129-190)||(33982662-33982723)
chr3 (129-190)||(38526250-38526311)
chr3 (129-190)||(43237387-43237448)
chr3 (129-190)||(44412078-44412139)
chr3 (129-190)||(47714596-47714657)
chr3 (129-190)||(47789369-47789430)
chr3 (129-190)||(54160859-54160920)
chr3 (129-190)||(55439681-55439742)
chr3 (129-189)||(42134613-42134673)
[»] chr7 (46 HSPs)
chr7 (129-251)||(45510378-45510500)
chr7 (129-232)||(14676285-14676388)
chr7 (129-251)||(38505267-38505389)
chr7 (129-190)||(374459-374520)
chr7 (129-190)||(28437465-28437526)
chr7 (129-190)||(33810135-33810196)
chr7 (129-214)||(42620275-42620360)
chr7 (129-190)||(43665092-43665153)
chr7 (129-251)||(19644327-19644451)
chr7 (133-209)||(43778502-43778578)
chr7 (129-248)||(38137970-38138089)
chr7 (129-251)||(5967976-5968098)
chr7 (129-191)||(23465923-23465985)
chr7 (129-191)||(36907379-36907441)
chr7 (129-251)||(43348162-43348284)
chr7 (141-190)||(1278035-1278084)
chr7 (129-190)||(23620717-23620777)
chr7 (129-214)||(31891349-31891433)
chr7 (134-227)||(35323591-35323684)
chr7 (129-229)||(36747353-36747454)
chr7 (129-190)||(36845364-36845425)
chr7 (129-214)||(38235867-38235952)
chr7 (129-190)||(41002174-41002235)
chr7 (129-185)||(24923317-24923373)
chr7 (129-209)||(42266930-42267010)
chr7 (134-190)||(45066820-45066876)
chr7 (129-189)||(46449270-46449330)
chr7 (129-189)||(47275925-47275985)
chr7 (140-190)||(3363704-3363754)
chr7 (152-190)||(22556650-22556688)
chr7 (152-214)||(25335380-25335442)
chr7 (132-190)||(33113565-33113623)
chr7 (152-190)||(33187793-33187831)
chr7 (140-190)||(38987490-38987540)
chr7 (129-190)||(46509361-46509423)
chr7 (129-190)||(4787926-4787987)
chr7 (138-251)||(6746511-6746624)
chr7 (129-190)||(7391305-7391366)
chr7 (142-251)||(22394188-22394297)
chr7 (129-190)||(33406555-33406616)
chr7 (129-190)||(43188954-43189015)
chr7 (219-251)||(1277964-1277996)
chr7 (146-190)||(9457475-9457519)
chr7 (129-189)||(23019726-23019786)
chr7 (129-189)||(38991396-38991456)
chr7 (131-199)||(44720169-44720237)
[»] chr5 (43 HSPs)
chr5 (129-251)||(19389751-19389873)
chr5 (129-190)||(32824745-32824806)
chr5 (129-232)||(17668057-17668160)
chr5 (131-233)||(12096957-12097059)
chr5 (129-190)||(2021077-2021138)
chr5 (129-190)||(28154787-28154848)
chr5 (129-190)||(33718278-33718339)
chr5 (129-190)||(35701500-35701561)
chr5 (130-190)||(6491281-6491341)
chr5 (129-189)||(9096409-9096469)
chr5 (129-233)||(9684714-9684818)
chr5 (152-247)||(29799676-29799772)
chr5 (181-251)||(3925766-3925836)
chr5 (140-214)||(5088804-5088878)
chr5 (152-206)||(6816304-6816358)
chr5 (132-190)||(25779592-25779650)
chr5 (129-190)||(26149700-26149761)
chr5 (133-190)||(29709607-29709664)
chr5 (129-190)||(35704969-35705030)
chr5 (129-217)||(4648910-4648998)
chr5 (131-216)||(27489808-27489895)
chr5 (129-189)||(32760854-32760914)
chr5 (129-189)||(35868928-35868988)
chr5 (129-189)||(38302281-38302341)
chr5 (132-251)||(13293910-13294029)
chr5 (131-190)||(26018838-26018897)
chr5 (152-190)||(1935053-1935091)
chr5 (152-190)||(4841655-4841693)
chr5 (129-187)||(35042304-35042362)
chr5 (152-189)||(3081278-3081315)
chr5 (140-189)||(7147493-7147542)
chr5 (134-171)||(14157134-14157171)
chr5 (129-190)||(15399912-15399973)
chr5 (129-190)||(17092994-17093055)
chr5 (129-190)||(25027019-25027080)
chr5 (129-190)||(27480095-27480156)
chr5 (129-190)||(35704709-35704770)
chr5 (129-190)||(41695074-41695135)
chr5 (129-189)||(1658275-1658335)
chr5 (158-214)||(2561166-2561222)
chr5 (129-189)||(6632746-6632806)
chr5 (158-190)||(15916980-15917012)
chr5 (129-224)||(27350929-27351025)
[»] chr8 (37 HSPs)
chr8 (129-233)||(40984997-40985101)
chr8 (129-244)||(35856453-35856568)
chr8 (129-251)||(35376561-35376682)
chr8 (129-214)||(13537415-13537500)
chr8 (129-214)||(13626963-13627048)
chr8 (149-251)||(32189-32291)
chr8 (129-190)||(11876937-11876998)
chr8 (129-190)||(11891944-11892005)
chr8 (129-214)||(13865015-13865100)
chr8 (129-232)||(35616615-35616718)
chr8 (128-251)||(41866049-41866172)
chr8 (129-190)||(3404497-3404558)
chr8 (152-217)||(10589874-10589939)
chr8 (129-186)||(10605080-10605137)
chr8 (129-218)||(11961444-11961533)
chr8 (129-190)||(29612088-29612149)
chr8 (129-190)||(33230970-33231031)
chr8 (129-190)||(34349812-34349873)
chr8 (129-190)||(35353925-35353985)
chr8 (129-190)||(36102813-36102874)
chr8 (141-190)||(38404438-38404487)
chr8 (142-190)||(16024509-16024557)
chr8 (129-189)||(31297271-31297331)
chr8 (129-189)||(37659454-37659514)
chr8 (132-191)||(3394057-3394116)
chr8 (139-214)||(16424211-16424286)
chr8 (152-190)||(9054457-9054495)
chr8 (155-209)||(28517209-28517263)
chr8 (152-190)||(41455356-41455394)
chr8 (131-224)||(7079919-7080012)
chr8 (129-190)||(15108187-15108248)
chr8 (129-190)||(25033477-25033538)
chr8 (158-251)||(28416123-28416216)
chr8 (129-190)||(32158862-32158923)
chr8 (129-190)||(34272612-34272673)
chr8 (129-190)||(39194028-39194089)
chr8 (129-214)||(43007771-43007856)
[»] chr6 (28 HSPs)
chr6 (132-232)||(33939049-33939149)
chr6 (129-251)||(29054603-29054725)
chr6 (174-251)||(13380567-13380644)
chr6 (130-188)||(27666167-27666225)
chr6 (154-231)||(15504749-15504826)
chr6 (129-189)||(8439318-8439378)
chr6 (152-214)||(2502312-2502374)
chr6 (129-251)||(34557096-34557217)
chr6 (129-190)||(4465023-4465084)
chr6 (129-190)||(5825429-5825490)
chr6 (129-214)||(15986416-15986501)
chr6 (129-190)||(23095051-23095112)
chr6 (129-190)||(24734977-24735038)
chr6 (129-190)||(26481054-26481115)
chr6 (129-190)||(26574318-26574379)
chr6 (129-190)||(33677120-33677181)
chr6 (129-190)||(34914724-34914785)
chr6 (133-233)||(26683371-26683471)
chr6 (129-189)||(29241756-29241816)
chr6 (152-251)||(26713889-26713988)
chr6 (153-251)||(20820487-20820585)
chr6 (153-235)||(27793554-27793636)
chr6 (129-190)||(1029390-1029451)
chr6 (129-214)||(15511628-15511713)
chr6 (141-190)||(17444039-17444087)
chr6 (152-189)||(22817287-22817324)
chr6 (129-233)||(13120345-13120449)
chr6 (131-199)||(32549729-32549797)
[»] scaffold1763 (1 HSPs)
scaffold1763 (129-191)||(527-589)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-251)||(90808-90930)
[»] scaffold0717 (1 HSPs)
scaffold0717 (129-190)||(1675-1736)
[»] scaffold0263 (1 HSPs)
scaffold0263 (152-251)||(12205-12304)
[»] scaffold1562 (1 HSPs)
scaffold1562 (129-190)||(237-298)
[»] scaffold1158 (1 HSPs)
scaffold1158 (129-190)||(2295-2356)
[»] scaffold0952 (1 HSPs)
scaffold0952 (129-190)||(3593-3654)
[»] scaffold0636 (1 HSPs)
scaffold0636 (129-190)||(8488-8549)
[»] scaffold0028 (1 HSPs)
scaffold0028 (129-190)||(35378-35439)
[»] scaffold0632 (1 HSPs)
scaffold0632 (129-190)||(2000-2061)
[»] scaffold0245 (1 HSPs)
scaffold0245 (133-190)||(4243-4300)
[»] scaffold0229 (1 HSPs)
scaffold0229 (133-190)||(4574-4631)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 53300201 - 53299932
Alignment:
Q  1 gtatttgatcttttgctagcctttcagttagtttctatcaatgaacttctaaataatgggaaagggaaaaaa-tagtttaggctttgtttggaagtttaa 99  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |    
T  53300201 gtattttatcttttgctagccttttagttagtttctatcaataaacttctaaataatgggaaagggaaaaaaatagtttaagttttgtttggaagtttga 53300102  T
Q  100 agcagagggaaaaggaaggctttggaggctttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagat 199  Q
    || ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  53300101 aggagagggaaaaggaagactttggaggctttagagaatgataaattaatatttatgattaatatattttaaaatttaaggatattataactatatagat 53300002  T
Q  200 gaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaatttgtattatgaagaaaaata 269  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  53300001 gaaatttgaacaatttatgcaaaccttccaaaattctcattcaatacaatttgtattatgaagaaaaata 53299932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 9021092 - 9020970
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||||| || |||||||| |  ||||| ||||||||||||  | | ||||||||||||||||   ||||| ||||||||| |||| |||||||||||||    
T  9021092 tttagagtatgataaattaatgcttatggttaatatattttttattctaagaatattataactacctagattaaatttgaagaattcatgcaaaccttcc 9020993  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| |||||||||||||||||    
T  9020992 aaaaccctcatccaatacaattt 9020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 40422996 - 40423081
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | |||||||| ||||||||||||||||||||| || |||||||||||||||||   |||||| ||||||||| ||||    
T  40422996 tttagagagtgataaattaatatttatgattaatatatttttaattttaagaatattataacaacatagattaaatttgaagaatt 40423081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 32648927 - 32649027
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || || |||||||||||||||||| || |||||||||||||||||   |||||| ||||||||| |||| ||  |||||||||    
T  32648927 tttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaaccttcc 32649026  T
Q  229 a 229  Q
    |    
T  32649027 a 32649027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 34236476 - 34236572
Alignment:
Q  157 attaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaatttgt 253  Q
    ||||||||||||| || |||||||||||||||||| ||||||| ||||||||| |||| ||| ||||| |||||||  ||| | ||||| |||||||    
T  34236476 attaatatatttttaattttaagaatattataactatatagattaaatttgaaaaattcatgtaaaccatccaaaatcctccttcaatataatttgt 34236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 42777225 - 42777344
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaa 230  Q
    |||||||| |||||||| | ||||| || |||||||||| || |||||  ||||||||||| |||| || ||||||||| |||| ||| ||||||| |||    
T  42777225 tagagaatgataaattaatgtttataatgaatatatttttaactttaatgatattataactatataaattaaatttgaagaattcatgtaaacctttcaa 42777324  T
Q  231 aactctcatccaatacaattt 251  Q
    |||| || |||||||||||||    
T  42777325 aact-tcctccaatacaattt 42777344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 51431102 - 51431041
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||||||| || |||||||||||||||||    
T  51431102 tttagagaatgataaagtaatatttatgattaatatatttttaattttaagaatattataac 51431041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 516202 - 516090
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaat-ttatgcaaaccttccaaaactctca 238  Q
    |||||||| | ||||| ||||||||||||| || ||||| ||||||| ||||  ||| |||||||||||| ||| | ||| ||||| |||||||||||||    
T  516202 ataaattaatgtttataattaatatatttttaattttaaaaatattacaactacatatatgaaatttgaataatatcatgtaaaccatccaaaactctca 516103  T
Q  239 tccaatacaattt 251  Q
    ||  |||||||||    
T  516102 tcttatacaattt 516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 28880149 - 28880029
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||| | |||||||| | ||||||||||||||||||| || |||||||||||||||||   ||| || ||||||||| |||| ||  ||| | |||    
T  28880149 tttagagagtgataaattaatgtttatgattaatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataaatcctcc 28880050  T
Q  229 aaaactctcatccaatacaat 249  Q
    ||||  ||||| |||||||||    
T  28880049 aaaatcctcattcaatacaat 28880029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 32060804 - 32060696
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  32060804 tttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaaccctcc 32060705  T
Q  229 aaaactctc 237  Q
    | |||||||    
T  32060704 ataactctc 32060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 24682942 - 24683041
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    ||||||||||||||||||  | ||||| ||||||||||||   ||||| ||||||||| |||| ||||||||| || ||||| ||| || ||||||||||    
T  24682942 ttatgattaatatattttttattttaaaaatattataactacctagattaaatttgaagaattcatgcaaaccctctaaaaccctcctcaaatacaattt 24683041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 37756645 - 37756768
Alignment:
Q  128 ctttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    ||||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  |||||| |    
T  37756645 ctttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacctcc 37756744  T
Q  228 caaaactctcatccaatacaattt 251  Q
    | |||| ||| ||||| |||||||    
T  37756745 cgaaaccctcctccaacacaattt 37756768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 42759596 - 42759675
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaa 230  Q
    ||||||||||||||||||| || ||||||||||||||||||   ||||| ||||||||| |||| ||| ||||| |||||    
T  42759596 tttatgattaatatatttttaattttaagaatattataactacttagattaaatttgaaaaattcatgtaaaccctccaa 42759675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 53013745 - 53013683
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||||||| |||||||| | ||||||||||||||||||| || ||||| ||||||||||||    
T  53013745 tttagagaatgataaattaatgtttatgattaatatatttttaattttaacaatattataact 53013683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 8828133 - 8828194
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | |||||||||||||||||||  ||||||| |||||||||||    
T  8828133 tttagagaatgataaattaatgtttatgattaatatattttttaatttaaaaatattataac 8828194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 15498740 - 15498821
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaac 233  Q
    |||||||||||||||||| || ||| |||||||||||||| | ||||| |||||| || |||| ||| ||||| ||||||||    
T  15498740 ttatgattaatatatttttaatttttagaatattataactatttagattaaatttaaagaattcatgtaaaccctccaaaac 15498821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 31530177 - 31530116
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| || |||||||||||||| ||| || |||||||||||||||||    
T  31530177 tttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataac 31530116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 41495563 - 41495648
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||| ||||| ||| |||| | ||||||||||||||||||| || ||||||||||||||||||   ||||| ||||||||| ||||    
T  41495563 tttaaagaatgatagattaatgtttatgattaatatatttttaattttaagaatattataacttcgtagattaaatttgaagaatt 41495648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 41844593 - 41844532
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| || |||||||||||||| ||| || |||||||||||||||||    
T  41844593 tttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataac 41844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 49936660 - 49936599
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  49936660 tttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataac 49936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 17115060 - 17115162
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||| ||||| |||||||| || ||| ||||||||||||||||| ||||| ||||||||||||   ||||| ||||| | | |||| ||| |||||||||    
T  17115060 tttaaagaatgataaattaatacttaagattaatatattttaaattttaa-aatattataactacgtagattaaattaggagaattcatgtaaaccttcc 17115158  T
Q  229 aaaa 232  Q
    ||||    
T  17115159 aaaa 17115162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 27143313 - 27143251
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||||||||||| || |||||||||||||||||  |||| || ||||||||| ||||    
T  27143313 ttatgattaatatatttttaattttaagaatattataacaatatatattaaatttgaagaatt 27143251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 7182114 - 7182175
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  7182114 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 7182175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 16535849 - 16535764
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||||| || || |||| |||||||| |||| || |||||||||||||||||   |||||| ||||||||| ||||    
T  16535849 tttagagaatgataaactaatacttataattaatatctttttaattttaagaatattataacaacatagattaaatttgaaaaatt 16535764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17873354 - 17873293
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  17873354 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 17873293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 21730250 - 21730311
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||||||| || || ||||||||||||||    
T  21730250 tttagagaatgataaactaatacttatgattaatatatttttaatttcaagaatattataac 21730311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 24291543 - 24291482
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  24291543 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 24291482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 31340925 - 31340864
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||||||| | |||| |||||||||||||  | |||||||||||||||||    
T  31340925 tttagagaatgataaattagaacttataattaatatattttttattttaagaatattataac 31340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 38317151 - 38317212
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  38317151 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 38317212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 46669868 - 46669929
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||  |  |||||||||||||||||| || |||||||||||||||||    
T  46669868 tttagagaatgataaatttatgcttatgattaatatatttttaattttaagaatattataac 46669929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 47669968 - 47669907
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  47669968 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 47669907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 48830737 - 48830798
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  48830737 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 48830798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 49404546 - 49404607
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  49404546 tttagagaatgataaactattacttatgattaatatacttttaattttaagaatattataac 49404607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 52594550 - 52594610
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  52594550 ttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 52594610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 32579331 - 32579272
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| |||||||||||| | ||||| ||||||||||||| || ||||| |||||||||||    
T  32579331 tagaaaataataaattaatgtttataattaatatatttttaattttaaaaatattataac 32579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 38366185 - 38366126
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||||||||| ||||| || || |||||||||||||||||| || ||||| |||||||||    
T  38366185 tttagagaatgataaactaatacttatgattaatatatttttaattttaaaaatattata 38366126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 46176860 - 46176979
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || |  |||||||| ||||||||| ||  |||| |||||||||||   |||||| ||||||||| |||| ||  |||||  ||    
T  46176860 tttagagaatgataaactaatggttatgattcatatatttttaatattaaaaatattataaccaaatagattaaatttgaaaaattcatataaacccccc 46176959  T
Q  229 aaaactctcatccaatacaa 248  Q
    ||||| ||| ||||||||||    
T  46176960 aaaaccctcctccaatacaa 46176979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 23708294 - 23708236
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||    
T  23708294 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 23708236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 31428959 - 31428837
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||  ||||||||   |||||| |||||||||||  || |||||||||||||||||   |||||| |||||  || |||| ||| ||| | |||    
T  31428959 tttagagaaagataaattaacgtttatggttaatatatttataattttaagaatattataacaacatagattaaattaaaagaattcatgtaaatcctcc 31428860  T
Q  229 aaaactctcatccaatacaattt 251  Q
    |||||  || |||||||||||||    
T  31428859 aaaaccatcttccaatacaattt 31428837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 39421948 - 39421906
Alignment:
Q  154 atgattaatatattttaaaatttaagaatattataactctata 196  Q
    |||||||||||||||| || |||||||||||||||||| ||||    
T  39421948 atgattaatatatttttaattttaagaatattataactatata 39421906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 48620424 - 48620386
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  48620424 ttatgattaatatatttttaattttaagaatattataac 48620386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 49668061 - 49668159
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| |||||||| || ||||| |||| ||||||   |||||| |||||| || |||| ||| |||||  ||||||| ||| |||||||||||||    
T  49668061 tatgattactatatttttaattttaaaaataatataacaacatagattaaatttaaaaaattcatgtaaaccccccaaaaccctcctccaatacaattt 49668159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 3126935 - 3126996
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  3126935 tttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataac 3126996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 8827743 - 8827828
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    ||||| |||| ||||| || | ||||||||| ||||||||| ||  ||||||||||||||||   |||||| ||||||||| ||||    
T  8827743 tttagggaatgataaactaatgtttatgattcatatatttttaatattaagaatattataacaacatagattaaatttgaagaatt 8827828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 15451283 - 15451363
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaac 233  Q
    |||||||||||||||||  || ||| |||||| ||||||| | ||||| ||||||||| |||| ||| ||||| ||||||||    
T  15451283 ttatgattaatatatttctaatttttagaata-tataactatttagattaaatttgaagaattcatgtaaaccctccaaaac 15451363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 41363735 - 41363796
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  41363735 tttacagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 41363796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 6836557 - 6836497
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| |||| |||||||| |  |||||||||||||||||| || ||||||||| |||||||    
T  6836557 ttagtgaatgataaattaatgcttatgattaatatatttttaattttaagaattttataac 6836497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 24662670 - 24662770
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||| | |  ||||||||||||| |||| || ||||| ||||||||||||  ||  || ||||||||| |||| ||| ||||| |||    
T  24662670 tttagagaatgataaatcaatgcttatgattaatatttttttaattttaaaaatattataactacatgtattaaatttgaaaaattcatgtaaaccctcc 24662769  T
Q  229 a 229  Q
    |    
T  24662770 a 24662770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 42954766 - 42954706
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||| | ||||| || | |||||||||||||||||||  | ||||||||||||||||    
T  42954766 tttagagagtgataaactaatgtttatgattaatatatttttgattttaagaatattataa 42954706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 52554932 - 52554984
Alignment:
Q  140 ataaattagtatttatgattaat-atattttaaaatttaagaatattataact 191  Q
    |||||||| |||||||||||||| |||| || || ||||||||||||||||||    
T  52554932 ataaattaatatttatgattaataatatctttaattttaagaatattataact 52554984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 5002732 - 5002832
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaatt 250  Q
    ||||||||| ||||||||| || |||||||||||||||||| ||||||| ||||||||| |||| ||| || ||||||||||| ||||||||||||||||    
T  5002732 tttatgattgatatatttttaattttaagaatattataactatatagattaaatttgaagaattcatgtaagccttccaaaaccctcatccaatacaatt 5002831  T
Q  251 t 251  Q
    |    
T  5002832 t 5002832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 6584744 - 6584821
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttga 208  Q
    |||||||| |||||||| | |||||||||||||||||||||| ||||| |||||||||||  |||| || ||||||||    
T  6584744 tagagaatcataaattaatttttatgattaatatattttaaattttaaaaatattataacaatatatattaaatttga 6584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 8555699 - 8555784
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||  |||||||  |||||||| ||||    
T  8555699 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 8555784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 8410853 - 8410953
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  |||||||||    
T  8410853 tttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaaccttcc 8410952  T
Q  229 a 229  Q
    |    
T  8410953 a 8410953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 41503312 - 41503193
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |  |||||||||||||||||| || |||||||||||| ||||   || ||| ||||||||| | |||||  |||||||      
T  41503312 tttagagaatgataaattaatgattatgattaatatatttttaagtttaagaatattttaac---attgattaaatttgaagagtttatataaacctttt 41503216  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||||||||||| ||| |||||    
T  41503215 aaaactctcatccgatataattt 41503193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 32951034 - 32950931
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| ||||||||||||||||||||| || | ||| |||||||||| |  ||| || ||||||||| |||| ||| || || |||    
T  32951034 tttagagaatgataaattaatatttatgattaatatatttttaactctaaaaatattataaatacataaattaaatttgaagaattcatgtaagccatcc 32950935  T
Q  229 aaaa 232  Q
    ||||    
T  32950934 aaaa 32950931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 3022853 - 3022795
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| |||||||| | ||||||||||||||||||| || ||||||||||||||    
T  3022853 tttagagaatgataaattaatgtttatgattaatatatttttaattttaagaatattat 3022795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 4666292 - 4666190
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcca 229  Q
    ||||||| | |||||||| |  ||||||||||||||||||||| |||||||||||||||||   ||| || ||||||||| |||| ||   |||||||||    
T  4666292 ttagagagtgataaattaatgcttatgattaatatattttaaattttaagaatattataacaagatatattaaatttgaaaaattcatattaaccttcca 4666193  T
Q  230 aaa 232  Q
    |||    
T  4666192 aaa 4666190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 14167114 - 14166992
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||| ||||| |||||| | | |||||| |||||||||||| || | |||||||||||||||   |||||| ||||||||| || ||||| ||||| |||    
T  14167114 tttaaagaatgataaatcaatgtttatggttaatatatttttaattctaagaatattataacaacatagattaaatttgaaaaaattatgtaaaccctcc 14167015  T
Q  229 aaaactctcatccaatacaattt 251  Q
    |||||| |  || ||||||||||    
T  14167014 aaaactttattctaatacaattt 14166992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 14385238 - 14385136
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| | ||||| |||| |||||||| || ||||| ||||||||||||  |||||| ||||||||| | || ||| ||||| |||    
T  14385238 tttagagaatgataaattaatgtttattattagtatatttttaattttaaaaatattataactacatagattaaatttgaagatttcatgtaaaccctcc 14385139  T
Q  229 aaa 231  Q
    |||    
T  14385138 aaa 14385136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 30265282 - 30265344
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    ||||||||||||||||||| |  |||||||||||||||||| || || |||||||||||||||    
T  30265282 tttagagaataataaattaatgcttatgattaatatatttttaacttcaagaatattataact 30265344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 44656684 - 44656758
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | ||||||||||||||||||| || |||||||||||||||||   ||| || ||||||||||||||    
T  44656684 ataaattaatttttatgattaatatatttttaattttaagaatattataacaacatatattaaatttgaacaatt 44656758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 12963894 - 12963954
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||| ||| ||||| |||||||||||||||||||| ||| || ||||||||||||||||    
T  12963894 tttagaaaatgataaagtagtatttatgattaatatacttttaattttaagaatattataa 12963954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 39913425 - 39913369
Alignment:
Q  135 gaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||| |||||||| | ||||||||||||||||||| || ||||||||||||||||||    
T  39913425 gaatgataaattaatgtttatgattaatatatttttaattttaagaatattataact 39913369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 4042122 - 4042061
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  4042122 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 4042061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 5972323 - 5972380
Alignment:
Q  133 gagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataa 189  Q
    |||||| |||||||| || |||||||||||||| ||||||| ||||||||||||||||    
T  5972323 gagaatgataaattaatacttatgattaatatatttttaaattttaagaatattataa 5972380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 8757514 - 8757457
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatta 186  Q
    ||||||||||||||||||| | |||||||||| ||| |||| || |||||||||||||    
T  8757514 tttagagaataataaattattgtttatgattattatctttttaattttaagaatatta 8757457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 13765862 - 13765923
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  13765862 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 13765923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 31899279 - 31899364
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | ||||| || || |||||||||||||| ||| || |||||||||||||||||  |||||||  |||||||| ||||    
T  31899279 tttagagactgataaactaatagttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 31899364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32243633 - 32243572
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  32243633 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 32243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 36030951 - 36030894
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatta 186  Q
    |||||||||| |||||||| |  |||||||||||||||||| || |||||||||||||    
T  36030951 tttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatta 36030894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 36567201 - 36567262
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  36567201 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 36567262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 38294046 - 38293985
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  38294046 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 38293985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 39670102 - 39670159
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatta 186  Q
    |||||||||| |||||||| | |||||||| |||||||||| || |||||||||||||    
T  39670102 tttagagaatgataaattaatgtttatgatcaatatatttttaattttaagaatatta 39670159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 40357615 - 40357554
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  40357615 tttagagaatgataaactaatacttatgattaatataattttaattttaagaatattataac 40357554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 42946658 - 42946735
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    |||||||| | ||||||||||||||||||| || |||||||||| ||||||   ||| || ||||||||| |||||||    
T  42946658 ataaattaatgtttatgattaatatatttttaattttaagaatagtataacaacatatattaaatttgaagaatttat 42946735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 44020497 - 44020436
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  44020497 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 44020436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 5193218 - 5193162
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||| | | |||||||||||||||||||||| ||| ||||| |||||||    
T  5193218 agaataataaatgaatgtttatgattaatatattttaaatttttagaattttataac 5193162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 32761209 - 32761269
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| |||| ||  ||||||||||| ||||||||| || ||||||||||||||||    
T  32761209 tttagagaatgataattttatatttatgattgatatatttttaattttaagaatattataa 32761269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 30523435 - 30523376
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||| ||||| |||||||| || |||||||||||||||||| || || ||||||||||||    
T  30523435 tttaaagaatgataaattaatacttatgattaatatatttttaatttcaagaatattata 30523376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 3038870 - 3038976
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  3038870 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattgatataaaccctcc 3038969  T
Q  229 aaaactc 235  Q
    | |||||    
T  3038970 ataactc 3038976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 9087632 - 9087706
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | ||||||||||||||||||| || ||||| |||||||| ||  |||| || ||||||||| ||||    
T  9087632 ataaattaatgtttatgattaatatatttttaattttaataatattatgacaatatatattaaatttgaataatt 9087706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 11522114 - 11522164
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||| |||||||||||||| || |||||||||||||||||    
T  11522114 ataaattaatgtttaagattaatatatttttaattttaagaatattataac 11522164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 16465093 - 16465167
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | |||||||||| ||||||||  | |||||||||||| ||||| |||| || ||||||||| ||||    
T  16465093 ataaattaatgtttatgattactatattttttattttaagaatattttaactatatatattaaatttgaagaatt 16465167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 16813757 - 16813660
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| |||||||| || ||||| |||||  ||||   |||||| |||||| || |||||||  ||||| |||||||||||| |||||||||||||    
T  16813757 tatgattactatatttttaattttaaaaatatg-taacaacatagattaaatttaaagaatttatataaaccctccaaaactctcctccaatacaattt 16813660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 16853036 - 16852939
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| |||||||| || ||||| |||||  ||||   |||||| |||||| || |||||||  ||||| |||||||||||| |||||||||||||    
T  16853036 tatgattactatatttttaattttaaaaatatg-taacaacatagattaaatttaaagaatttatataaaccctccaaaactctcctccaatacaattt 16852939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 25955757 - 25955819
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || ||||||||||||||||||    
T  25955757 tttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataact 25955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 31550185 - 31550243
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||    
T  31550185 tttagagaatgataaactaatagttatgattaatatacttttaattttaagaatattat 31550243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 36574394 - 36574432
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  36574394 ttatgattaatatatttttaattttaagaatattataac 36574432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 3737192 - 3737281
Alignment:
Q  162 tatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| || ||||| ||||||||||||  ||| || ||||||||| |||||||| ||||  || ||||||||  || ||||||||||    
T  3737192 tatatttttaattttaaaaatattataactacatatattaaatttgaagaatttatgtaaacactctaaaactcttttctaatacaattt 3737281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 8990886 - 8990947
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  8990886 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 8990947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 13767360 - 13767299
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | |||||| |||||||||||| |  |||||||||||| ||||    
T  13767360 tttagagaatgataaattaatgtttatggttaatatatttttagctttaagaatattgtaac 13767299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 14008252 - 14008313
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| |||  | |||||||||||||||||    
T  14008252 tttagagaatgataaactaatacttatgattaatatacttttgattttaagaatattataac 14008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 17514933 - 17514982
Alignment:
Q  142 aaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||| | ||||||||||||||||||| || ||||| ||||||||||||    
T  17514933 aaattaatgtttatgattaatatatttttaattttaaaaatattataact 17514982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 18018521 - 18018582
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||| |||||||    
T  18018521 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaattttataac 18018582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 18780542 - 18780481
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||  ||||| || ||||||||||||||||| ||| || ||||| |||||||||||    
T  18780542 tttagagaacgataaactaatatttatgattaatatacttttaattttaataatattataac 18780481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 18826149 - 18826210
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| || || || || |||||||||||||| ||| || |||||||||||||||||    
T  18826149 tttagagaatgatgaactaatacttatgattaatatacttttaattttaagaatattataac 18826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 38023370 - 38023431
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || |  |||||||||||||| ||| || |||||||||||||||||    
T  38023370 tttagagaatgataaactaattcttatgattaatatacttttaattttaagaatattataac 38023431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 726106 - 726046
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||| ||||||||||    
T  726106 tttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatattataa 726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 13767574 - 13767515
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||| |||||| | | ||||||||||||||||||| || ||||| |||||||||||    
T  13767574 ttagagaatgataaataa-tgtttatgattaatatatttttaattttaaaaatattataac 13767515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 43100135 - 43100190
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||| |||||||||| ||| ||||||||||||||| |  |||||||||||||||||    
T  43100135 agaatgataaattagt-tttgtgattaatatatttttacttttaagaatattataac 43100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 30543286 - 30543408
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| || |||||||||||||||||| || ||||||||||| |||||| ||||||| ||||||||| |||| ||| ||||| |||    
T  30543286 tttagagaatgataaattaatacttatgattaatatatttttaattttaagaatatcataactatatagattaaatttgaagaattcatgtaaaccctcc 30543385  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| |||   |||||||||||    
T  30543386 aaaaccctccagcaatacaattt 30543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 41432685 - 41432786
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||||||||||||||||| || |||||||||||||||||| || ||||||||||||||||||  |||||| ||||||||| |||| ||| ||||| |||    
T  41432685 tttagagaataataaattaatacttatgattaatatatttttaattttaagaatattataactacatagattaaatttgaagaattcatgtaaaccctcc 41432784  T
Q  229 aa 230  Q
    ||    
T  41432785 aa 41432786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 35619448 - 35619559
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcat 239  Q
    |||||||| | ||||||||||||||| ||| || |||||||||||||||||   ||| || ||||||||| |||| || |||||| | |||||| |||||    
T  35619448 ataaattaatgtttatgattaatatacttttaattttaagaatattataacaacatatattaaatttgaagaattcatacaaacccttcaaaaccctcat 35619547  T
Q  240 ccaatacaattt 251  Q
    ||||||||||||    
T  35619548 ccaatacaattt 35619559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 28848722 - 28848844
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |   |||||||| |||||||| || ||||| ||||||||||||   ||||| ||||||||| |||| ||| ||||| |||    
T  28848722 tttagagaatgataaattaatgcctatgattactatatttttaattttaaaaatattataactacttagattaaatttgaagaattcatgtaaaccatcc 28848821  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| |||||||||||||    
T  28848822 aaaaccctcctccaatacaattt 28848844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 9315001 - 9315081
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaac 233  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||  |||||||| ||||||||| |||| ||||||||    
T  9315001 ttatgattaatatattttaaattttaagaatattataactacatagat-taatttgaagaatttatgcgaaccctccaaaac 9315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 5970364 - 5970483
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || | ||||||||| |||| |||| ||  ||||||||||||||||  ||||||  ||||||||| |||| ||  ||||| ||     
T  5970364 tttagagaatgataaactaatgtttatgattgatatgtttttaatattaagaatattataacaatatagaataaatttgaagaattcatataaaccctca 5970463  T
Q  229 aaaactctcatccaatacaa 248  Q
    ||||||||||||||||||||    
T  5970464 aaaactctcatccaatacaa 5970483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 52073381 - 52073503
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||||||   ||||||||||||||||||| || ||||||||||||||||||   |||||  |||||||| |||| ||  ||||| |||    
T  52073381 tttagagaatgataaattaacgtttatgattaatatatttttaattttaagaatattataactacttagattgaatttgaaaaattcatctaaaccctcc 52073480  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| || | ||||||||    
T  52073481 aaaaccctcctctagtacaattt 52073503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 2175492 - 2175392
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| || |||||| |||    
T  2175492 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatacaaaccctcc 2175393  T
Q  229 a 229  Q
    |    
T  2175392 a 2175392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 14153269 - 14153161
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  14153269 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattaatataaaccctcc 14153170  T
Q  229 aaaactctc 237  Q
    | |||||||    
T  14153169 ataactctc 14153161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 33579411 - 33579316
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaacc 224  Q
    |||||||||| |||||||| |  |||||| ||||||||||| || |||||||||||||||| | | ||||| ||||||||| |||| ||| |||||    
T  33579411 tttagagaatgataaattaatgcttatgactaatatatttttaattttaagaatattataattatttagattaaatttgaagaattcatgtaaacc 33579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17675354 - 17675293
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  17675354 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 17675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 28748343 - 28748226
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaac 233  Q
    ||||| ||||| || || ||||||||||||||||||||| |||| ||||||||||||   ||||||  ||||| || |||| ||  ||||| |  |||||    
T  28748343 agaatgataaactaatacttatgattaatatattttaaattttatgaatattataacaacatagattgaatttaaaaaattcatataaacccttaaaaac 28748244  T
Q  234 tctcatccaatacaattt 251  Q
    | ||||||||||||||||    
T  28748243 tttcatccaatacaattt 28748226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 50162273 - 50162213
Alignment:
Q  149 tatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaa 209  Q
    ||||||||||||||||||||| || ||||||||||||||||||  ||||||  ||||||||    
T  50162273 tatttatgattaatatatttttaattttaagaatattataactacatagattcaatttgaa 50162213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 15463969 - 15463846
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    |||||||||| ||||| || || |||||||||||||| ||||||  |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| ||    
T  15463969 tttagagaatgataaactaatacttatgattaatatacttttaatttttaagaatattataacaaaatagattgaatttgaaaaattcatataaaccctc 15463870  T
Q  228 caaaactctcatccaatacaattt 251  Q
    || ||| |||  ||||||||||||    
T  15463869 cataaccctcccccaatacaattt 15463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 43036269 - 43036368
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||||||||||||| || |||||||||||||||||   |||||| ||||||||| |||| ||  ||||| ||| ||||   | |||||||||||||    
T  43036269 ttatgattaatatatttttaattttaagaatattataacaacatagattaaatttgaagaattcatataaaccctcccaaacctccctccaatacaattt 43036368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 41427930 - 41428020
Alignment:
Q  142 aaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaa 232  Q
    |||||| || ||||||||  |||||||| || |||||||||||||||||  ||||||  ||||||||| ||||||   |||||||||||||    
T  41427930 aaattaataattatgattgctatatttttaattttaagaatattataacaatatagaataaatttgaagaatttacataaaccttccaaaa 41428020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 2493061 - 2493119
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||||||  |||||||||||||||||||  || ||||||||||||||||    
T  2493061 tttagagaatgataaatta--atttatgattaatatatttgtaattttaagaatattataa 2493119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 2925858 - 2925943
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   |||||| ||||||||| ||||    
T  2925858 tttagaaaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 2925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 11017759 - 11017698
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  11017759 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 11017698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 23871386 - 23871447
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  23871386 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 23871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 33991699 - 33991638
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  33991699 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 33991638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 42161976 - 42162037
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || ||||| |||||||||||    
T  42161976 tttagagaatgataaactaatatttatgattaatatacttttaattttaaaaatattataac 42162037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 42333770 - 42333673
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaa 248  Q
    |||||||||  |||||||| ||  |||| |||||||||||  |||| || ||||||||| |||| ||  ||||| |||||||||||| ||||||||||    
T  42333770 tttatgattcgtatatttttaatattaataatattataacagtataaattaaatttgaagaattcatataaaccgtccaaaactctcctccaatacaa 42333673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 13061320 - 13061420
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| || |||||| |||    
T  13061320 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatacaaaccatcc 13061419  T
Q  229 a 229  Q
    |    
T  13061420 a 13061420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17688501 - 17688436
Alignment:
Q  129 tttagagaataataaattagta----tttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||| |||||    ||||||||||||||| ||| || |||||||||||||||||    
T  17688501 tttagagaataataaactagtaagtatttatgattaatatacttttaattttaagaatattataac 17688436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 27102775 - 27102851
Alignment:
Q  157 attaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaac 233  Q
    ||||||||||||| |||||||| |||||||||||  || |||| ||||||||| |||| ||  ||||||| ||||||    
T  27102775 attaatatatttttaaatttaaaaatattataacaataaagattaaatttgaagaattcatataaacctttcaaaac 27102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 28217466 - 28217526
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||| |||||| ||||||| | ||||||||||||||||||| || ||||| ||||||||||    
T  28217466 tttaaagaatagtaaattaatgtttatgattaatatatttttaattttaataatattataa 28217526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 50097772 - 50097716
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatt 185  Q
    |||||||| | |||||||| | ||||||||||||||||||| || ||||||||||||    
T  50097772 tttagagagtgataaattattgtttatgattaatatatttttaattttaagaatatt 50097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 1071125 - 1071070
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    ||||| ||||| || ||||||||||||||||||||| || |||||| |||||||||    
T  1071125 agaatgataaactaatatttatgattaatatatttttaattttaaggatattataa 1071070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 28773313 - 28773372
Alignment:
Q  129 tttagagaataataaattagtatttat-gattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| ||||| || | ||||| ||||||||||||||||| ||||||||||||||    
T  28773313 tttagagaatgataaactaatgtttattgattaatatattttaaattttaagaatattat 28773372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 35604191 - 35604250
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattat 187  Q
    |||||||||||||||||||   ||||||||||||||| |||| || ||||||||||||||    
T  35604191 tttagagaataataaattaacgtttatgattaatatattttttaattttaagaatattat 35604250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 36668595 - 36668642
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagat 199  Q
    |||||||||||||||||| || |||||||||||||||||  |||||||    
T  36668595 ttatgattaatatatttttaattttaagaatattataacaatatagat 36668642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 40243499 - 40243460
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  40243499 tttatgattaatatatttttaattttaagaatattataac 40243460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 17416641 - 17416703
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||||| | |||||||| | ||||||||||||||||||| || | ||||| ||||||||||    
T  17416641 tttagagattgataaattaatgtttatgattaatatatttttaattataagactattataact 17416703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 26345783 - 26345697
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaattt 215  Q
    |||||||||| |||||||| |  |||||||||||||||||   | ||||| ||||||||||||   ||||| ||||||||| |||||    
T  26345783 tttagagaatgataaattaatgcttatgattaatatatttattattttaaaaatattataactacctagattaaatttgaagaattt 26345697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 51246497 - 51246618
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || | ||||||||||||||| ||| || ||||| ||| |||||||   ||||||  |||||||| |||| ||  ||||| | |    
T  51246497 tttagagaatgataaactaatctttatgattaatatacttttaattttaaaaattttataacaaaatagattgaatttgaaaaattcatataaaccct-c 51246595  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| |||||||||||||    
T  51246596 aaaaccctcctccaatacaattt 51246618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 51847578 - 51847624
Alignment:
Q  203 atttgaacaatttatgcaaaccttccaaaactctcatccaatacaat 249  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  51847578 atttgaaaaatttattcaaacctcccaaaactcttatccaatacaat 51847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 1278623 - 1278566
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| |||||||| |  |||||||||||||||||| || |||||||||| ||||||    
T  1278623 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataac 1278566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1523753 - 1523692
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  1523753 tttaaagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 1523692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 12293970 - 12293909
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||| ||||||||| ||| || |||||||||||||||||    
T  12293970 tttagagaatgataaactaatacttattattaatatacttttaattttaagaatattataac 12293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 13255502 - 13255441
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| |||  | |||||||||||||||||    
T  13255502 tttagagaatgataaactaatacttatgattaatatacttttgattttaagaatattataac 13255441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 27500142 - 27500081
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||| |||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  27500142 tttagtgaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 27500081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32299260 - 32299199
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  32299260 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 32299199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32300213 - 32300152
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  32300213 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 32300152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 34141681 - 34141624
Alignment:
Q  134 agaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataac 190  Q
    ||||| |||||||| | ||||||||||||||| ||||||| |||||||||||| ||||    
T  34141681 agaatgataaattaatgtttatgattaatatatttttaaattttaagaatattttaac 34141624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 39889581 - 39889642
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||| ||||||||||||    
T  39889581 tttagagaatgataaactaatacttatgattaatatacttttaattttatgaatattataac 39889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 42488550 - 42488611
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| |||  | |||||||||||||||||    
T  42488550 tttagagaatgataaactaatacttatgattaatatacttttgattttaagaatattataac 42488611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 42806328 - 42806243
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | |||||||| || |||||||| |||||||||  | ||||| |||||||||||   |||||| ||||||||| ||||    
T  42806328 tttagagagtgataaattaatacttatgattgatatattttttattttaaaaatattataacaacatagattaaatttgaagaatt 42806243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 43530221 - 43530282
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| |  |||||||||||||||||| || ||||||| |||||||||    
T  43530221 tttagagagtgataaattaatgcttatgattaatatatttttaattttaagagtattataac 43530282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47206347 - 47206408
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||  | || |||||||||||||| ||| || |||||||||||||||||    
T  47206347 tttagagaattataaacaaatacttatgattaatatacttttaattttaagaatattataac 47206408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47905612 - 47905673
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || | |||||||||||| ||| || |||||||||||||||||    
T  47905612 tttagagaatgataaactaatactaatgattaatatacttttaattttaagaatattataac 47905673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 50402895 - 50402838
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||||| || || |||||||||||||||||| || ||||| |||||||||||    
T  50402895 gagaatgataaactaatacttatgattaatatatttttaattttaaaaatattataac 50402838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 51303098 - 51303159
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| |  ||||||||||||||||||  |  ||||||||||||||||    
T  51303098 tttagagaatgataaattaatgcttatgattaatatattttttatgttaagaatattataac 51303159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 5883528 - 5883587
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||| | |||||||| || |||||||||||||||||| || ||||| |||||||||||    
T  5883528 ttagagagtgataaattaatacttatgattaatatatttttaattttaa-aatattataac 5883587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 24436855 - 24436935
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaa 209  Q
    |||||||| | |||||||| | ||| ||||||||||||||| || ||||| | |||||||||   |||||| |||||||||    
T  24436855 tttagagagtgataaattaatgtttttgattaatatatttttaattttaaaagtattataacaacatagattaaatttgaa 24436935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 26757078 - 26757138
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||| ||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  26757078 tttaaagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 26757138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 15499222 - 15499326
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || || ||||||||||||||||||||| ||||||||||||||||||  |||||| ||||||||| |||||||| ||||| | |    
T  15499222 tttagagaatgataaaataatacttatgattaatatattttaaattttaagaatattataactacatagattaaatttgaaaaatttatgtaaacccttc 15499321  T
Q  229 aaaac 233  Q
    |||||    
T  15499322 aaaac 15499326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 38401864 - 38401964
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaatt 250  Q
    ||||| |||||||||||||||| ||| ||||||||||||   |||| || ||||||||| ||||||| ||||||||| || |||||||||||||||||||    
T  38401864 tttataattaatatattttaaattttgagaatattataataatatatattaaatttgaagaatttatacaaaccttctaagactctcatccaatacaatt 38401963  T
Q  251 t 251  Q
    |    
T  38401964 t 38401964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 1132858 - 1132980
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| | || ||| |||||||||||| || ||||||||||||| ||||  |||||| |||||| || |||| ||| ||||| |||    
T  1132858 tttagagaatgataaattaatgttcatggttaatatatttttaattttaagaatattacaactacatagattaaatttaaagaattcatgtaaaccctcc 1132957  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| |||||||||||||    
T  1132958 aaaaccctcctccaatacaattt 1132980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 13638584 - 13638499
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| |||||||| |  |||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||| ||||    
T  13638584 tttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactatatagattaaatttgaagaatt 13638499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 32858988 - 32858884
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| || ||| |||||||||||||| || ||||||||||||||||||  |||||| ||||||||  |||| ||| ||||| |||    
T  32858988 tttagagaatgataaattaatacttacgattaatatatttttaattttaagaatattataactacatagattaaatttgatgaattcatgtaaaccctcc 32858889  T
Q  229 aaaac 233  Q
    |||||    
T  32858888 aaaac 32858884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 4247275 - 4247181
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaac 223  Q
    |||||||||| |||||||| |  |||||||||||||||||| || ||||||||||||||||||  |||||| ||||||||| |||| ||| ||||    
T  4247275 tttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactaaatagattaaatttgaagaattcatgtaaac 4247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 7302242 - 7302148
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaac 223  Q
    |||||||||| |||||| | || |||||||||||||||||| |  |||||||||||||||||| ||||||| ||||||||| |||| ||| ||||    
T  7302242 tttagagaatgataaatcaatacttatgattaatatatttttagttttaagaatattataactatatagattaaatttgaagaattcatgtaaac 7302148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 2420817 - 2420696
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  2420817 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaaccctcc 2420718  T
Q  229 aaaactctcatccaatacaattt 251  Q
    |||||||||  ||||||||||||    
T  2420717 aaaactctc-cccaatacaattt 2420696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 46891544 - 46891456
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    |||||||| | |||||||| || |||||||||||||||||| || |||||||||||||||||   ||| || ||||||||| |||||||    
T  46891544 tttagagactgataaattaatacttatgattaatatatttttaattttaagaatattataacaacatatattaaatttgaagaatttat 46891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 34306755 - 34306634
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||| ||||| ||||| || ||||||||||||||||| |||||  |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  34306755 tttatagaatgataaactaatatttatgattaatatactttaat-tttaagaatattataacaacatagattgaatttgaaaaattcatataaaccctcc 34306657  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| |||  ||||||||||||    
T  34306656 aaaaccctcccccaatacaattt 34306634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 36598382 - 36598312
Alignment:
Q  154 atgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaacc 224  Q
    |||||||||||||||| |||||||| ||||| |||||| ||||||| ||||||||| |||| ||| |||||    
T  36598382 atgattaatatatttttaaatttaaaaatataataactatatagattaaatttgaataattcatgtaaacc 36598312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17642747 - 17642686
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  17642747 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 17642686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 36796582 - 36796521
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  36796582 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 36796521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 42583222 - 42583283
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| || |||||||||||||||||    
T  42583222 tttagagaatgataaactagtacttatgattaatatacttttaactttaagaatattataac 42583283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 7965174 - 7965086
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    ||||||||||||||||||| | |||||||||||||||||||  | |||  ||||||||||||   |||||| |||||| || |||||||    
T  7965174 tttagagaataataaattaatgtttatgattaatatattttttatttttggaatattataacgacatagattaaattttaaaaatttat 7965086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 25428826 - 25428738
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||||||    
T  25428826 tttagagaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatttat 25428738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 38515395 - 38515307
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    |||||||||||||||| || || |||||||||||||| ||| || |||||||||||||| ||   ||||||  |||||||| |||||||    
T  38515395 tttagagaataataaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagattgaatttgaaaaatttat 38515307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 55115623 - 55115585
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  55115623 ttatgattaatatattttaaattttaagaatattataac 55115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 3334022 - 3333962
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | ||||||||||||| ||||| || |||||||||||||||||    
T  3334022 tttagagaatgataaattaatgtttatgattaata-attttcaattttaagaatattataac 3333962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 11500260 - 11500155
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    |||||||||| |||||||| | ||||| ||||||||| |||| || |||||||||||||||||   ||| || ||||||||| |||| ||| ||||  ||    
T  11500260 tttagagaatgataaattaatgtttataattaatatattttttaattttaagaatattataacaacatatattaaatttgaagaattaatgtaaactctc 11500161  T
Q  228 caaaac 233  Q
    ||||||    
T  11500160 caaaac 11500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 23163681 - 23163620
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  23163681 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 23163620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 27681961 - 27681900
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  27681961 tttagagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataac 27681900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 30131809 - 30131870
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  30131809 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 30131870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 39499356 - 39499295
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||||||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  39499356 tttaaagaataataaactaatacttatgattaatatacttttaattttaagaatattataac 39499295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 41961900 - 41961961
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  41961900 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 41961961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 43007445 - 43007506
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  43007445 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 43007506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 49860994 - 49860933
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  49860994 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 49860933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 45898636 - 45898684
Alignment:
Q  141 taaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    ||||||| | |||||| ||||||||||||||| ||||||||||||||||    
T  45898636 taaattaatgtttatgcttaatatattttaaattttaagaatattataa 45898684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 49304366 - 49304306
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||| ||||| |||||||| | ||||||||||||||||||| || |||| |||||||||||    
T  49304366 tttaaagaatgataaattaatgtttatgattaatatatttttaattttatgaatattataa 49304306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 2927980 - 2927941
Alignment:
Q  151 tttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  2927980 tttatgattaatatatttttaattttaagaatattataac 2927941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 3043051 - 3043110
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||    
T  3043051 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattata 3043110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 37545336 - 37545277
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||||||||| |||||||| | ||||| |||| ||||||||||| ||||||||| |||||    
T  37545336 tttagagaatgataaattaatttttatcattattatattttaaattttaagaattttata 37545277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 46312343 - 46312402
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || ||||| |||||||||    
T  46312343 tttagagaatgataaactaatatttatgattaatatacttttaattttaaaaatattata 46312402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 48444663 - 48444584
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttga 208  Q
    |||||||| | |||||| | | ||||||||||||||||||| || ||||| |||||||||||  |||| || ||||||||    
T  48444663 tttagagagtgataaatcaatgtttatgattaatatatttttaattttaaaaatattataacaatatatattaaatttga 48444584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 19148302 - 19148264
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  19148302 ttatgattaatatatttttaattttaagaatattataac 19148264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 30121445 - 30121503
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||    
T  30121445 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 30121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 47434217 - 47434275
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||    
T  47434217 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 47434275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 54089389 - 54089455
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaattt 206  Q
    |||||||| | || |||||||||||||||| || ||||| ||||||||||||  |||||| ||||||    
T  54089389 ataaattaatgttaatgattaatatatttttaattttaaaaatattataactacatagatcaaattt 54089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 1339846 - 1339907
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| ||||||||||| ||||||||||||||||    |||||| ||||||||| ||||    
T  1339846 tatgattactatattttaaattttaagaatattataataaaatagattaaatttgaagaatt 1339907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 7661194 - 7661133
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||| ||| ||| || |||||||||||||||||    
T  7661194 tttagagaatgataaactaatacttatgattaacatacttttaattttaagaatattataac 7661133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 18257631 - 18257692
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || | ||||||||| ||||||||| ||  ||||||||||||||||    
T  18257631 tttagagaatgataaactaatgtttatgattcatatatttttaatattaagaatattataac 18257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32708883 - 32708822
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | ||||||||  || |||||| || |||||||||||||||||    
T  32708883 tttagagaatgataaattaatgtttatgatagatgtatttttaattttaagaatattataac 32708822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 33982662 - 33982723
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||| || || || |||| |||||| ||| || |||||||||||||||||    
T  33982662 tttagagaataataaactaatacttgtgataaatatacttttaattttaagaatattataac 33982723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 38526311 - 38526250
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  38526311 tttagacaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 38526250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 43237448 - 43237387
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||| | ||| || |||||||||||||||||    
T  43237448 tttagagaatgataaactaatacttatgattaataaacttttaattttaagaatattataac 43237387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 44412078 - 44412139
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| || ||| |||||||||| ||| || ||||| |||||||||||    
T  44412078 tttagagaatgataaattaatacttacgattaatatacttttaattttaaaaatattataac 44412139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47714596 - 47714657
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||  || || |||||||||||||| ||| || |||||||||||||||||    
T  47714596 tttagagaatgataagctaatacttatgattaatatacttttaattttaagaatattataac 47714657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47789369 - 47789430
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  47789369 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 47789430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 54160859 - 54160920
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||| |||||||| | ||||||| ||| |||||||||| ||||| |||||||||||    
T  54160859 tttaaagaatcataaattaatgtttatgactaacatattttaaattttaaaaatattataac 54160920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 55439742 - 55439681
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  55439742 tttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataac 55439681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 42134613 - 42134673
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    ||||||||||  |||| || | ||||||||||||||||||| || ||||| ||||||||||    
T  42134613 tttagagaatgctaaactaatgtttatgattaatatatttttaattttaataatattataa 42134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 45510500 - 45510378
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| | |||||||||||||||||||||| ||||| ||||||||||||   ||||| ||||||||| ||||  |  ||||| |||    
T  45510500 tttagagaatgataaattaatgtttatgattaatatattttaaattttaaaaatattataactacttagattaaatttgaagaattcgtctaaaccctcc 45510401  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||||||||||| |||||    
T  45510400 aaaaccctcatccaatataattt 45510378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 14676388 - 14676285
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||| |||| |||||||| |  ||||| |||||||||||| || ||||||||||||||||||  |||||| ||||||||| |||| ||| ||||| |||    
T  14676388 tttagggaatgataaattaatgcttatggttaatatattttcaattttaagaatattataactacatagattaaatttgaagaattcatgtaaaccctcc 14676289  T
Q  229 aaaa 232  Q
    ||||    
T  14676288 aaaa 14676285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 38505267 - 38505389
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |    ||||||| |||||||| || ||||| |||||||||||   |||||| ||||||||| |||| ||  ||||| |||    
T  38505267 tttagagaatgataaattaatgcagatgattactatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaaccctcc 38505366  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| |||||||||||||    
T  38505367 aaaaccctcctccaatacaattt 38505389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 374459 - 374520
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| |||||||| ||| | ||||||||||||||||||| || |||||||||||||||||    
T  374459 tttagataataataatttaatgtttatgattaatatatttttaattttaagaatattataac 374520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 28437465 - 28437526
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  28437465 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 28437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 33810135 - 33810196
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  33810135 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 33810196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 42620275 - 42620360
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||  |||||||  |||||||| ||||    
T  42620275 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 42620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 43665092 - 43665153
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||||||| || |||||||||||||||||    
T  43665092 tttagagaatgataaactactacttatgattaatatatttttaattttaagaatattataac 43665153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 19644451 - 19644327
Alignment:
Q  129 tttagagaataataaattagtatttatgattaat-atattttaaaatttaagaatattataactctatagatgaaatttg-aacaatttatgcaaacctt 226  Q
    |||||||||| |||||||| || ||||||||||| ||| ||| || |||||||||||||||||   ||||||  |||||| || |||| ||  ||| | |    
T  19644451 tttagagaattataaattaatacttatgattaataatacttttaattttaagaatattataacaacatagattgaatttgaaaaaattcatataaatcct 19644352  T
Q  227 ccaaaactctcatccaatacaattt 251  Q
    ||||||| |||||||||||||||||    
T  19644351 ccaaaaccctcatccaatacaattt 19644327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 43778502 - 43778578
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaa 209  Q
    |||||| ||||| || ||||||||||||||||| ||| || |||||||||||||||||  |||||||  ||||||||    
T  43778502 gagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaa 43778578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 38138089 - 38137970
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |  |||||||||||| ||||| || || || |||||||||||   |||||| ||||||||| |||| ||  | |||||||    
T  38138089 tttagagaatgataaattaatgcttatgattaatacatttttaatttcaaaaatattataacaacatagattaaatttgaagaattcatatagaccttcc 38137990  T
Q  229 aaaactctcatccaatacaa 248  Q
    || || ||| ||||||||||    
T  38137989 aataccctcctccaatacaa 38137970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 5967976 - 5968098
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||   ||||||  |||||||| |||| ||  ||||| |||    
T  5967976 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaaccctcc 5968075  T
Q  229 aaaactctcatccaatacaattt 251  Q
    | ||| |||  | ||||||||||    
T  5968076 ataaccctcccctaatacaattt 5968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 23465923 - 23465985
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||||||| |||||||| |  ||||||||||||||| || || ||||||||||||||||||    
T  23465923 tttagagaatgataaattaattcttatgattaatatatatttaattttaagaatattataact 23465985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 36907441 - 36907379
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    |||||| ||| |||||||| | |||||||||| |||||||| || ||||||||||||||||||    
T  36907441 tttagataatgataaattaatgtttatgattactatatttttaattttaagaatattataact 36907379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 43348162 - 43348284
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||||||| ||||||||| |   |||||||| |||||||| || ||||| |||||||||||   |||||| ||||||||| |||| ||   |||| |||    
T  43348162 tttagagaacaataaattaatgcatatgattattatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatattaaccctcc 43348261  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| || ||||||||||    
T  43348262 aaaaccctcctctaatacaattt 43348284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 1278084 - 1278035
Alignment:
Q  141 taaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||  |||||||||||||||||| || |||||||||||||||||    
T  1278084 taaattagtgcttatgattaatatatttttaattttaagaatattataac 1278035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 23620717 - 23620777
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||||||| || |||||||||||||||||    
T  23620717 tttagagaatgataaactaatacttatgattaatatatttt-aattttaagaatattataac 23620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 31891433 - 31891349
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||| |||| | ||||||| ||||||||||| || |||||||||||||||||   |||||| ||||||||| ||||    
T  31891433 tttagagaatgatagattaatgtttatgactaatatatttttaa-tttaagaatattataacaacatagattaaatttgaagaatt 31891349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 35323684 - 35323591
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    ||||| |||||||| |||||||||||||||| ||| ||| |||| |||||| |||||   |||||| |||||| || |||||||  ||||||||    
T  35323684 agaatgataaattaatatttatgattaatatttttaaaattttaggaatatgataacatgatagattaaatttaaagaatttatataaaccttc 35323591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 36747454 - 36747353
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    |||||||||| | ||| || || |||||||||||||| |||| || |||||||||||||||||  |||||||  |||||||| |||| ||  ||||||||    
T  36747454 tttagagaatgaaaaactaatacttatgattaatatactttttaattttaagaatattataacaatatagattgaatttgaaaaattcatataaaccttc 36747355  T
Q  228 ca 229  Q
    ||    
T  36747354 ca 36747353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 36845364 - 36845425
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||  ||||||| || ||||||||| |||||||| || |||||||||||||||||    
T  36845364 tttagagaatgttaaattaatacttatgattactatatttttaattttaagaatattataac 36845425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 38235952 - 38235867
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||| |||||||||||  |||||||  |||||||| ||||    
T  38235952 tttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatattataacaatatagattgaatttgaaaaatt 38235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 41002174 - 41002235
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||||||| || |||||||||||||||||    
T  41002174 tttagataatgataaactaatacttatgattaatatatttttaattttaagaatattataac 41002235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 24923317 - 24923373
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatt 185  Q
    |||||||||| |||||||| |  |||||||||||||||||| || ||||||||||||    
T  24923317 tttagagaatgataaattaatgattatgattaatatatttttaattttaagaatatt 24923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 42266930 - 42267010
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaa 209  Q
    |||||||||| |||||||| |  ||||| ||| |||||||| || |||||||||||||||||   |||||| |||||||||    
T  42266930 tttagagaatgataaattaatgcttatgtttactatatttttaattttaagaatattataacaacatagattaaatttgaa 42267010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 45066876 - 45066820
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||| |||||||| ||||||||||||| ||||||| || |||||||| ||||||||    
T  45066876 agaatgataaattaatatttatgattaacatatttttaattttaagaacattataac 45066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 46449330 - 46449270
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| |||||||| || |||| ||||||||| ||| || ||||||||||||||||    
T  46449330 tttagagaatgataaattaatacttataattaatatacttttaattttaagaatattataa 46449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 47275925 - 47275985
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  47275925 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 47275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 3363754 - 3363704
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| ||||||| ||| ||||||||| || |||||||||||||||||    
T  3363754 ataaattaatatttataattgatatatttttaattttaagaatattataac 3363704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 22556650 - 22556688
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  22556650 ttatgattaatatatttttaattttaagaatattataac 22556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 25335442 - 25335380
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||||||||||| || ||||||||| |||||||   |||||| ||||||||| ||||    
T  25335442 ttatgattaatatatttttaattttaagaattttataacaaaatagattaaatttgaaaaatt 25335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 33113565 - 33113623
Alignment:
Q  132 agagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  33113565 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 33113623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 33187793 - 33187831
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  33187793 ttatgattaatatatttttaattttaagaatattataac 33187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 38987540 - 38987490
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | ||||||||||||||||||| || ||||| |||||||||||    
T  38987540 ataaattaatgtttatgattaatatatttttaattttaacaatattataac 38987490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 46509423 - 46509361
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | |||||| |||||||| |||| || |||||||||||||||||    
T  46509423 tttagagaatgataaattaatgtttatggttaatatattttttaattttaagaatattataac 46509361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 4787926 - 4787987
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| |  |||||||||||||||||| || ||||| |||||||||||    
T  4787926 tttagagagtgataaattaatgcttatgattaatatatttttaattttaaaaatattataac 4787987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 6746511 - 6746624
Alignment:
Q  138 taataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctc 237  Q
    |||||||||| | |||||||||| |||||||| || |||||||  ||||||||   |||| | ||||||||| |||| ||  ||||| |||||| | | |    
T  6746511 taataaattaatgtttatgattactatatttttaattttaagatcattataacaacataggttaaatttgaagaattcatataaaccctccaaacccccc 6746610  T
Q  238 atccaatacaattt 251  Q
     |||||||||||||    
T  6746611 ctccaatacaattt 6746624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 7391305 - 7391366
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| | ||| || |||||||||||| || |||||||||||||||||    
T  7391305 tttagagagtgataaattaatgtttgtggttaatatatttttaattttaagaatattataac 7391366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 251
Target Start/End: Complemental strand, 22394297 - 22394188
Alignment:
Q  142 aaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatcc 241  Q
    ||||||||  |||||||||||||||||| || ||||||||| |||||||    || || ||||||||| |||| || ||||||   | |||| |||| ||    
T  22394297 aaattagtgcttatgattaatatattttcaattttaagaattttataacaaagtatattaaatttgaaaaattcatacaaacccctctaaaccctcaccc 22394198  T
Q  242 aatacaattt 251  Q
    ||||||||||    
T  22394197 aatacaattt 22394188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 33406555 - 33406616
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| ||  | |||||||||||||| ||| || |||||||||||||||||    
T  33406555 tttagagaatgataaactaacacttatgattaatatacttttaattttaagaatattataac 33406616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 43189015 - 43188954
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  43189015 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 43188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 1277996 - 1277964
Alignment:
Q  219 caaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||||| ||||||||||||||||||||||    
T  1277996 caaaccttccgaaactctcatccaatacaattt 1277964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 9457475 - 9457519
Alignment:
Q  146 tagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||||| ||| || ||||||||||| |||||    
T  9457475 tagtatttatgattaatatacttttaattttaagaatatcataac 9457519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 23019726 - 23019786
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||| | |||||||||||||| | || || ||||||| || ||||||||||||||||    
T  23019726 tttagagagtgataaattagtattttttatcaacatatttttaattttaagaatattataa 23019786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 38991396 - 38991456
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||||||   ||||| |||||||||||||  | ||||||||||||||||    
T  38991396 tttagagaatgataaattaaagtttataattaatatattttttattttaagaatattataa 38991456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 44720237 - 44720169
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagat 199  Q
    |||||||| ||||| || || ||||||||| |||| ||| || |||||||||||||||||  |||||||    
T  44720237 tagagaatgataaactaatacttatgattagtatacttttaattttaagaatattataacaatatagat 44720169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 19389751 - 19389873
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |  |||||||||||||||||| || ||||| ||||||||||||  |||||| ||||||||| |||| ||| ||||| |||    
T  19389751 tttagagaatgataaattaatgcttatgattaatatatttttaattttaaaaatattataactacatagattaaatttgaagaattcatgtaaaccctcc 19389850  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||  ||| |||||||||||||    
T  19389851 aaaatcctcctccaatacaattt 19389873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32824806 - 32824745
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||    
T  32824806 tttagagaataataaattaatgtttatgattaatatatttttaattttaagaatattataac 32824745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 17668057 - 17668160
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||| |||| |||||||| |  ||||| |||||||||||| || ||||||||||||||||||  |||||| ||||||||| |||| ||| ||||| |||    
T  17668057 tttagggaatgataaattaatgcttatgcttaatatattttcaattttaagaatattataactacatagattaaatttgaagaattcatgtaaaccctcc 17668156  T
Q  229 aaaa 232  Q
    ||||    
T  17668157 aaaa 17668160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 12097059 - 12096957
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaa 230  Q
    |||||||| ||||| || | || | ||||||||||||||||| ||||||||||||||||   |||||||  |||||||| |||| ||||||||| |||||    
T  12097059 tagagaatgataaactaatgttgaggattaatatattttaaattttaagaatattataataatatagattgaatttgaagaattcatgcaaaccatccaa 12096960  T
Q  231 aac 233  Q
    |||    
T  12096959 aac 12096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 2021138 - 2021077
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| ||||||||||||||||| ||| || |||||||||||||||||    
T  2021138 tttagagaatgataaattaatatttatgattaatatacttttaattttaagaatattataac 2021077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 28154848 - 28154787
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| | |||||||||||||||||||  | |||||||||||||||||    
T  28154848 tttagagaatgataaattaatgtttatgattaatatattttttattttaagaatattataac 28154787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 33718339 - 33718278
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||||||| || |||||||||||||||||    
T  33718339 tttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataac 33718278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 35701561 - 35701500
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| |||||| |||||||||||||||||    
T  35701561 tttagagaatgataaactaatacttatgattaatatactttaaattttaagaatattataac 35701500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 6491341 - 6491281
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||| |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  6491341 ttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataac 6491281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 9096469 - 9096409
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| |||||||| | ||| ||||||||||||||| || ||||||||||||||||    
T  9096469 tttagagaatgataaattaatgtttttgattaatatatttttaattttaagaatattataa 9096409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 9684714 - 9684818
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||| ||| |||||||| |  |||||||||||||||||| || ||||||||||||||||||   ||||| | ||||||| |||| ||| |||||  ||    
T  9684714 tttagaaaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactacttagattagatttgaagaattcatgtaaacccccc 9684813  T
Q  229 aaaac 233  Q
    |||||    
T  9684814 aaaac 9684818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 29799772 - 29799676
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaac-cttccaaaactctcatccaataca 247  Q
    |||||||||||||||||| || ||||| ||||||||||    ||| || ||||||||| |||||||  |||| |||||||||| |||||||||||||    
T  29799772 ttatgattaatatatttttaattttaaaaatattataataacatatattaaatttgaagaatttatataaactcttccaaaaccctcatccaataca 29799676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 3925766 - 3925836
Alignment:
Q  181 atattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    ||||||||||   |||||| ||||||||| |||||||  ||| | ||||||||||||||||||||||||||    
T  3925766 atattataacaacatagatcaaatttgaagaatttatataaatcgtccaaaactctcatccaatacaattt 3925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 5088804 - 5088878
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||| | |||||||| |||||||||| || ||||||||||||||||||  ||| || ||||||||| ||||    
T  5088804 ataaattaatgtttatgataaatatatttttaattttaagaatattataactacataaattaaatttgaagaatt 5088878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 6816358 - 6816304
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaattt 206  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||||| ||||||    
T  6816358 ttatgattaatatatttttaattttaaaaatattataactatatagattaaattt 6816304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 25779650 - 25779592
Alignment:
Q  132 agagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||| |||||||| ||||||| |||| |||||||| || |||||||||||||||||    
T  25779650 agagaatgataaattaatatttataattattatatttttaattttaagaatattataac 25779592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 26149761 - 26149700
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||||||||||| ||||| ||| || |||||||||||||||||    
T  26149761 tttagagaatgataaactaatatttatgattgatatacttttaattttaagaatattataac 26149700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 29709664 - 29709607
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| |||||||| | |||||||||||||||||||  | |||||||||||||||||    
T  29709664 gagaatgataaattaatgtttatgattaatatattttttattttaagaatattataac 29709607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 35704969 - 35705030
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  35704969 tttagaaaatcataaattaatgcttatgattaatatatttttaattttaagaatattataac 35705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 4648910 - 4648998
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||| ||||||   ||||||  |||||||| |||||||    
T  4648910 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatactataacaacatagattgaatttgaaaaatttat 4648998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 27489895 - 27489808
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaattt--aagaatattataactctatagatgaaatttgaacaattta 216  Q
    |||||||| |||||| | |||||||||||||||||||||||| |||  ||  |||||||||||  ||||||  |||||||| ||||||    
T  27489895 tagagaatgataaatgaatatttatgattaatatattttaaattttgaaaatatattataactacatagattgaatttgaagaattta 27489808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 32760914 - 32760854
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  32760914 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 32760854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 35868988 - 35868928
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  35868988 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 35868928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 38302281 - 38302341
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  38302281 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 38302341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 13293910 - 13294029
Alignment:
Q  132 agagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaa 231  Q
    ||||||| |||||||| || ||||||||||||||||||  | ||||| |||||||||||   | |||| ||| ||||| |||  ||  ||||| |||||     
T  13293910 agagaatgataaattaatacttatgattaatatattttttattttaaaaatattataacaacagagattaaacttgaagaatacatataaaccctccaag 13294009  T
Q  232 actctcatccaatacaattt 251  Q
    || ||| |||||||||||||    
T  13294010 accctcctccaatacaattt 13294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 26018897 - 26018838
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| | |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  26018897 tagagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataac 26018838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 1935053 - 1935091
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  1935053 ttatgattaatatatttttaattttaagaatattataac 1935091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 4841655 - 4841693
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  4841655 ttatgattaatatatttttaattttaagaatattataac 4841693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 35042362 - 35042304
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattat 187  Q
    |||||||||| |||||||| | |||||||| | |||||||| || ||||||||||||||    
T  35042362 tttagagaatgataaattaatgtttatgatcactatatttttaattttaagaatattat 35042304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 3081278 - 3081315
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||||||||||| || ||||||||||||||||    
T  3081278 ttatgattaatatatttttaattttaagaatattataa 3081315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 7147542 - 7147493
Alignment:
Q  140 ataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||| | ||||||||||| ||||||| || ||||||||||||||||    
T  7147542 ataaattaatgtttatgattaaaatatttttaattttaagaatattataa 7147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 14157171 - 14157134
Alignment:
Q  134 agaataataaattagtatttatgattaatatattttaa 171  Q
    |||||||||||||| | |||||||||||||||||||||    
T  14157171 agaataataaattaatgtttatgattaatatattttaa 14157134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 15399973 - 15399912
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||  || |||| | ||||||||||||||||||| || ||||| |||||||||||    
T  15399973 tttagagaatgctagattaatttttatgattaatatatttttaattttaaaaatattataac 15399912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17093055 - 17092994
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| |  || |||||||||||||| ||| || |||||||||||||||||    
T  17093055 tttagagaatgataaacttatacttatgattaatatacttttaattttaagaatattataac 17092994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 25027080 - 25027019
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||| ||||||||| ||| || |||||||||||||||||    
T  25027080 tttagagaatgataaactaatacttatcattaatatacttttaattttaagaatattataac 25027019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 27480095 - 27480156
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || ||  ||||||||||||| ||| || |||||||||||||||||    
T  27480095 tttagagaatgataaactaatacatatgattaatatacttttaattttaagaatattataac 27480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 35704770 - 35704709
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||||||||  ||||||||||| |||||| || ||| | |||||||||||    
T  35704770 tttagagaatgataaattagtgcttatgattaatgtatttttaactttcaaaatattataac 35704709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 41695135 - 41695074
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| |||||||| || |||||||||||||| |||  | ||||| |||||||||||    
T  41695135 tttagagaatgataaattaatacttatgattaatatacttttgattttaaaaatattataac 41695074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 1658335 - 1658275
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||| ||||||||| ||| || ||||||||||||||||    
T  1658335 tttagagaatgataaactaatacttataattaatatacttttaattttaagaatattataa 1658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 2561222 - 2561166
Alignment:
Q  158 ttaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    ||||||||||||||| ||||| |||| |||||||  |||||| ||||||||| ||||    
T  2561222 ttaatatattttaaattttaataatagtataactacatagattaaatttgaagaatt 2561166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 6632806 - 6632746
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||| | |||||||| ||||| | |||| |||||||| || ||||||||||||||||    
T  6632806 tttagagagtgataaattaatatttgtaattagtatatttttaattttaagaatattataa 6632746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 15917012 - 15916980
Alignment:
Q  158 ttaatatattttaaaatttaagaatattataac 190  Q
    ||||||||||||||| |||||||||||||||||    
T  15917012 ttaatatattttaaattttaagaatattataac 15916980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 27350929 - 27351025
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatata-ttttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaacc 224  Q
    |||||||||  |||||||| |  |||||||||||||| |||| || ||| | |||||||||| | ||||||| |||||||||  ||| |||||||||    
T  27350929 tttagagaacgataaattaatgattatgattaatatattttttaatttttaaaatattataattatatagattaaatttgaaggattcatgcaaacc 27351025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 40984997 - 40985101
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| | ||||||||||||||||||| || ||||| |||| ||||||| |||| || ||||||||| |||| ||| ||||| |||    
T  40984997 tttagagaatgataaattaatgtttatgattaatatatttttaattttaataatactataactatataaattaaatttgaagaattcatgtaaaccctcc 40985096  T
Q  229 aaaac 233  Q
    |||||    
T  40985097 aaaac 40985101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 35856453 - 35856568
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||| ||| |||||||||| |||||||||| || | |||||||||||||||  |||||||   ||||||| |||| ||  ||||||| |    
T  35856453 tttagagaatgataagttaatatttatgatgaatatatttttaattataagaatattataacaatatagatttgatttgaagaattcatataaaccttgc 35856552  T
Q  229 aaaactctcatccaat 244  Q
    ||||| ||||||||||    
T  35856553 aaaaccctcatccaat 35856568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 35376561 - 35376682
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||||||| ||||||||| |  |||||||||||||||||| || |||||||| |||||| |  |||||||  |||||||| | || || ||||||||||    
T  35376561 tttagagaacaataaattaatgcttatgattaatatatttt-aattttaagaacattataccaatatagatttaatttgaagatttcatacaaaccttcc 35376659  T
Q  229 aaaactctcatccaatacaattt 251  Q
    |||||| || || ||||||||||    
T  35376660 aaaactatcctctaatacaattt 35376682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 13537500 - 13537415
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    ||||||||||||||||||| |  |||||||||||||||||| || |||||||||||||||| |  || ||| ||||||||| ||||    
T  13537500 tttagagaataataaattaatgcttatgattaatatatttttaattttaagaatattataattacatcgattaaatttgaagaatt 13537415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 13627048 - 13626963
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    ||||||||||||||||||| |  |||||||||||||||||| || |||||||||||||||| |  || ||| ||||||||| ||||    
T  13627048 tttagagaataataaattaatgcttatgattaatatatttttaattttaagaatattataattacatcgattaaatttgaagaatt 13626963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 32291 - 32189
Alignment:
Q  149 tatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaa 248  Q
    ||||||||||||||||||||| || |||||||||||||||||   ||| || | ||||||| |||| ||  ||||| || ||||||||| || |||||||    
T  32291 tatttatgattaatatatttttaattttaagaatattataacaacataaattacatttgaagaattcatataaaccgtcaaaaactctcctctaatacaa 32192  T
Q  249 ttt 251  Q
    |||    
T  32191 ttt 32189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 11876937 - 11876998
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| || |||||||||||||||||| || |||||||||||||||||    
T  11876937 tttagagagtgataaattaatacttatgattaatatatttttaagtttaagaatattataac 11876998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 11891944 - 11892005
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| || |||||||||||||||||| || |||||||||||||||||    
T  11891944 tttagagagtgataaattaatacttatgattaatatatttttaagtttaagaatattataac 11892005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 13865015 - 13865100
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||| ||| |||||||| || |||||||||||||| ||| || |||||||||||||||||   |||||| ||||||||| ||||    
T  13865015 tttagaaaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 13865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 35616718 - 35616615
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||| | |||||||| | |||| |||||||||||||| || |||||||||||| |||||   || || ||||||||| |||| ||| ||||| |||    
T  35616718 tttagagattgataaattaatgtttaagattaatatatttttaattttaagaatattgtaactacctaaattaaatttgaagaattcatgtaaaccctcc 35616619  T
Q  229 aaaa 232  Q
    ||||    
T  35616618 aaaa 35616615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 41866049 - 41866172
Alignment:
Q  128 ctttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttc 227  Q
    ||||| |||||||||||||| |   |||||||  |||||||| || ||||| |||| ||||||   |||||| ||||||||| |||||||  ||||| |     
T  41866049 ctttaaagaataataaattaatgcatatgattgctatatttttaattttaaaaataatataacaacatagattaaatttgaagaatttatataaaccctt 41866148  T
Q  228 caaaactctcatccaatacaattt 251  Q
    |||||| ||| |||||||||||||    
T  41866149 caaaaccctcctccaatacaattt 41866172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 3404497 - 3404558
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  3404497 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 3404558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 10589939 - 10589874
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttat 217  Q
    ||||| ||||||||||||||| ||||| ||||||||||||  |||||| |||||| || |||||||    
T  10589939 ttatgcttaatatattttaaattttaaaaatattataactacatagattaaatttaaaaaatttat 10589874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 10605080 - 10605137
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatatta 186  Q
    |||||||||| |||||||| ||||||||||||||||||||| || |||| | ||||||    
T  10605080 tttagagaatgataaattattatttatgattaatatatttttaattttaggtatatta 10605137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 11961444 - 11961533
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatg 218  Q
    |||||| ||| |||||||| || |||| ||||||||||||| || ||| ||| ||||||||||  ||| || ||||||||| ||||||||    
T  11961444 tttagaaaatgataaattaatacttattattaatatatttttaattttcagagtattataactacataaattaaatttgaagaatttatg 11961533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 29612149 - 29612088
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| |||||||| || |||||||||||||||||| || ||||| |||||||||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaattttaataatattataac 29612088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 33230970 - 33231031
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  33230970 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 33231031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 34349873 - 34349812
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  34349873 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 34349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 35353985 - 35353925
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||| |||||||| |||||||||||||||||||||  ||||| |||||||||||||    
T  35353985 tttatagaatgataaattaatatttatgattaatatatttt-taattttagaatattataac 35353925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 36102813 - 36102874
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  36102813 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 36102874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 38404487 - 38404438
Alignment:
Q  141 taaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||| |||||||||||||||||||||  | |||||||||||||||||    
T  38404487 taaattaatatttatgattaatatattttttattttaagaatattataac 38404438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 16024509 - 16024557
Alignment:
Q  142 aaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| || ||||||||||||||||||  |||||||||||||||||||    
T  16024509 aaattaatacttatgattaatatattttttaatttaagaatattataac 16024557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 31297271 - 31297331
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||  ||||| || ||||||||||||||||| ||| || ||||||||||||||||    
T  31297271 tttagagaacgataaactaatatttatgattaatatacttttaattttaagaatattataa 31297331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 37659454 - 37659514
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  37659454 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 37659514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 3394116 - 3394057
Alignment:
Q  132 agagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    ||||||| |||||||| | |||||||||||||||||||  | ||||| ||||||||||||    
T  3394116 agagaatgataaattaatgtttatgattaatatattttttattttaaaaatattataact 3394057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 16424286 - 16424211
Alignment:
Q  139 aataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    ||||||||| |  |||| ||||||||||||| || ||||||||||||||||||  ||| || ||||||||| ||||    
T  16424286 aataaattactgcttataattaatatatttttaattttaagaatattataactacatatattaaatttgaagaatt 16424211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 9054457 - 9054495
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  9054457 ttatgattaatatatttttaactttaagaatattataac 9054495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 28517209 - 28517263
Alignment:
Q  155 tgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaa 209  Q
    ||||||||||||||| || ||||||||||||||||||  ||| || |||||||||    
T  28517209 tgattaatatatttttaattttaagaatattataactacatatattaaatttgaa 28517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 41455394 - 41455356
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||||||||||| || |||||||||||||||||    
T  41455394 ttatgattaatatatttttaattttaagaatattataac 41455356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 7079919 - 7080012
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaacc 224  Q
    |||||| | |||||||| |  |||||||||||||||||| || ||||| |||||||||||   |||||  ||||||||| |||| || ||||||    
T  7079919 tagagagtgataaattaatgcttatgattaatatatttttaattttaaaaatattataacaacatagactaaatttgaagaattcatacaaacc 7080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 15108187 - 15108248
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||||||  | |||||||||||||| ||  || |||||||||||||||||    
T  15108187 tttagagaatgataaattaacacttatgattaatatacttataattttaagaatattataac 15108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 25033538 - 25033477
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  25033538 tttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataac 25033477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 28416123 - 28416216
Alignment:
Q  158 ttaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||| ||||||| || |||||||||||||||||    || || |||||||||||||   |  ||||| |||||||| |||||||||||||||||    
T  28416123 ttaaaatatttttaattttaagaatattataacaacgtatattaaatttgaacaatacgtataaaccctccaaaaccctcatccaatacaattt 28416216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 32158923 - 32158862
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| |||||||||| |  ||||| |||||||||||| || ||||| |||||||||||    
T  32158923 tttagagagtaataaattaatgattatggttaatatatttttaattttaaaaatattataac 32158862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 34272673 - 34272612
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| ||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  34272673 tttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 34272612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 39194089 - 39194028
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || | ||||||||| ||||||||| ||  ||||||||||||||||    
T  39194089 tttagagaatgataaactaatgtttatgattcatatatttttaatattaagaatattataac 39194028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 43007856 - 43007771
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| ||||||||   |||||||||| | |||||| || ||| |||||||||||||   |||||| ||||||||| ||||    
T  43007856 tttagagaatgataaattaaggtttatgattactctatttttaattttgagaatattataacaacatagattaaatttgaaaaatt 43007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 33939049 - 33939149
Alignment:
Q  132 agagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaa 231  Q
    ||||||| |||||||| | ||||||||||||||||||| || ||||||||||||||||||  |||||  ||||||||  |||| ||| ||||| ||||||    
T  33939049 agagaatgataaattaatgtttatgattaatatatttttaattttaagaatattataactacatagaataaatttgagaaattcatgaaaaccctccaaa 33939148  T
Q  232 a 232  Q
    |    
T  33939149 a 33939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 29054725 - 29054603
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| ||| |||||||| ||||||||  | ||||| |||||||||||  ||||||| ||||||||| |||| ||  ||||| ||     
T  29054725 tttagagaatgataaattaatatatatgattactatattttttattttaataatattataaccatatagattaaatttgaaaaattcatataaaccctca 29054626  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||  ||||| |||||||||||    
T  29054625 aaaatcctcattcaatacaattt 29054603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 13380644 - 13380567
Alignment:
Q  174 tttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    ||||||||||||||||||  |||||| ||||||||| |||||||| ||||  |||||||| ||| |||||||||||||    
T  13380644 tttaagaatattataactacatagattaaatttgaagaatttatgtaaacgctccaaaaccctcttccaatacaattt 13380567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 27666167 - 27666225
Alignment:
Q  130 ttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattata 188  Q
    |||||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||||    
T  27666167 ttagagaataataaattaatgtttatgattgatatcttttaaattttaagaatattata 27666225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 15504749 - 15504826
Alignment:
Q  154 atgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaa 231  Q
    |||||||||||||||| || ||||||||| |||||||||  ||||| ||||||||| |||| ||| ||||||| ||||    
T  15504749 atgattaatatatttttaattttaagaatgttataactccttagattaaatttgaagaattcatgtaaacctttcaaa 15504826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 8439318 - 8439378
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| |||||||| | ||||||||||||||||||| || ||||| ||||||||||    
T  8439318 tttagagaatgataaattaatgtttatgattaatatatttttaattttaacaatattataa 8439378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 2502312 - 2502374
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||||||||||| || |||||||||||||||||  |||| || ||||||||| ||||    
T  2502312 ttatgattaatatatttttaattttaagaatattataacaatatatattaaatttgaagaatt 2502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 34557096 - 34557217
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    ||||||||||  ||||||| |||| |||||||||||||||| || ||||| |||||||||| |  || ||| ||||||||| |||| ||| ||||  | |    
T  34557096 tttagagaatggtaaattaatatt-atgattaatatatttttaactttaaaaatattataaatacattgattaaatttgaagaattcatgtaaacgcttc 34557194  T
Q  229 aaaactctcatccaatacaattt 251  Q
    |||| |||| ||||| |||||||    
T  34557195 aaaattctcctccaaaacaattt 34557217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 4465084 - 4465023
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||| ||||| |||||||| | ||||||||||||||||||| || ||||| |||||||||||    
T  4465084 tttaaagaatgataaattaatgtttatgattaatatatttttaattttaaaaatattataac 4465023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 5825490 - 5825429
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  5825490 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 5825429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 15986501 - 15986416
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| |||||||| |  | |||||||||||||||| || ||||||||| |||||||||  || || ||||||||| ||||    
T  15986501 tttagagaatgataaattaatgataatgattaatatatttttaattttaagaatgttataactccctatattaaatttgaagaatt 15986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 23095051 - 23095112
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  23095051 tttagagaatgataaaataatacttatgattaatatacttttaattttaagaatattataac 23095112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 24735038 - 24734977
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  24735038 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 24734977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 26481054 - 26481115
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  26481054 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 26481115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 26574318 - 26574379
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  26574318 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 26574379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 33677181 - 33677120
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| |  |||||||||||||||||| || |||||||||||||||||    
T  33677181 tttagagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataac 33677120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 34914785 - 34914724
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  34914785 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 34914724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 26683471 - 26683371
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaa 232  Q
    |||||| |||||||| |  || ||||||||||||||| || ||||||||| |||||| | |||| || ||||||||| |||| ||| ||||| || ||||    
T  26683471 gagaatgataaattaatgcttgtgattaatatatttttaattttaagaattttataattatataaattaaatttgaagaattcatgtaaaccctctaaaa 26683372  T
Q  233 c 233  Q
    |    
T  26683371 c 26683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 29241756 - 29241816
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||| ||||| || || |||||||||||||| ||| || ||||||||||||||||    
T  29241756 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 29241816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 26713988 - 26713889
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| ||||||||| ||  ||||||||| ||||||   |||||  ||||||||| |||| ||  ||||| |||||||| ||| |||||||||||||    
T  26713988 ttatgattcatatatttttaatattaagaataatataacaacatagaataaatttgaagaattcatataaaccctccaaaaccctcctccaatacaattt 26713889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 20820487 - 20820585
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    |||||||| |||||||| || ||||| |||| ||||||   ||| || ||||||||| |||| ||  ||| | || |||||||||||||||||||||||    
T  20820487 tatgattactatatttttaattttaaaaataatataacaacatatattaaatttgaaaaattcatataaatcctctaaaactctcatccaatacaattt 20820585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 27793554 - 27793636
Alignment:
Q  153 tatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactc 235  Q
    ||||||||||||||||| || |||||||||||| ||||   |||| | | ||||||| |||| || |||||||||| ||||||    
T  27793554 tatgattaatatatttttaattttaagaatattttaacaacataggttatatttgaaaaattcatacaaaccttcccaaactc 27793636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1029451 - 1029390
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || || ||||||||||| ||| || |||||||||||||||||    
T  1029451 tttagagaatgataaactaatacttgtgattaatatacttttaattttaagaatattataac 1029390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 15511628 - 15511713
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatt 214  Q
    |||||||||| || ||||| |  | |||||||||||||||| || ||| ||||| |||||||||  ||||| ||||||||| ||||    
T  15511628 tttagagaatgattaattaatgataatgattaatatattttgaattttcagaatgttataactccctagattaaatttgaagaatt 15511713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 17444087 - 17444039
Alignment:
Q  141 taaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    ||||||| || |||||||||||||||||| || |||||||||||||||||    
T  17444087 taaattaatacttatgattaatatatttt-aattttaagaatattataac 17444039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 22817287 - 22817324
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataa 189  Q
    |||||||||||||||||| || ||||||||||||||||    
T  22817287 ttatgattaatatatttttaattttaagaatattataa 22817324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 13120345 - 13120449
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||||||||| |||||||| |   ||| ||||||||||||| || ||||| |||||||||||   ||||||  |||||||| |||| ||| ||||| | |    
T  13120345 tttagagaatgataaattaatgagtataattaatatatttttaattttaacaatattataacaacatagattgaatttgaagaattcatgtaaaccgttc 13120444  T
Q  229 aaaac 233  Q
    |||||    
T  13120445 aaaac 13120449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 32549729 - 32549797
Alignment:
Q  131 tagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagat 199  Q
    |||| ||| |||||||| |||||||||||| ||||||||  | ||||| |||||||||||  |||||||    
T  32549729 tagaaaatgataaattaatatttatgattactatattttttattttaaaaatattataacaatatagat 32549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 527 - 589
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataact 191  Q
    ||||||||||  ||||||| | ||||||||||||||||||| || ||||||||||||||||||    
T  527 tttagagaatgttaaattaatgtttatgattaatatatttttaattttaagaatattataact 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 90808 - 90930
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttcc 228  Q
    |||| ||||| |||||||| |  |||||||||  ||||||| || ||||| |||||||||||   |||||| ||||||||| |||| ||  ||||| |||    
T  90808 tttaaagaatgataaattaatgcttatgattacaatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaaccatcc 90907  T
Q  229 aaaactctcatccaatacaattt 251  Q
    ||||| ||| |||||||||||||    
T  90908 aaaaccctcctccaatacaattt 90930  T

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Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1736 - 1675
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||||||| || |||||||||||||||||    
T  1736 tttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataac 1675  T

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Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 12205 - 12304
Alignment:
Q  152 ttatgattaatatattttaaaatttaagaatattataactctatagatgaaatttgaacaatttatgcaaaccttccaaaactctcatccaatacaattt 251  Q
    ||||||||| |||||||| || ||||| |||||||||||   |||||| ||||||||| |||| ||  ||||| |||||||  ||| |||||||||||||    
T  12205 ttatgattactatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaaccatccaaaaacctcctccaatacaattt 12304  T

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Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 298 - 237
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  298 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 237  T

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Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 2295 - 2356
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  2295 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 2356  T

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Target: scaffold0952 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 3593 - 3654
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  3593 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 3654  T

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Target: scaffold0636 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 8549 - 8488
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  8549 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 8488  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 35378 - 35439
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||||| ||||| || || |||||||||||||| ||| || |||||||||||||||||    
T  35378 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 35439  T

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Target: scaffold0632 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 2000 - 2061
Alignment:
Q  129 tttagagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||||| | |||||||| || |||| ||||| ||||||| || |||||||||||||||||    
T  2000 tttagagagtgataaattaatacttataattaaaatatttttaattttaagaatattataac 2061  T

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Target: scaffold0245 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 4300 - 4243
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| |||||||| |  |||||||||||||||||| || |||||||||| ||||||    
T  4300 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataac 4243  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 4631 - 4574
Alignment:
Q  133 gagaataataaattagtatttatgattaatatattttaaaatttaagaatattataac 190  Q
    |||||| |||||||| |  |||||||||||||||||| || |||||||||| ||||||    
T  4631 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataac 4574  T

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