View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21299_high_10 (Length: 257)
Name: NF21299_high_10
Description: NF21299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21299_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 8797339 - 8797106
Alignment:
| Q |
12 |
tcatcataatgctcatcatccaataaattccaataacaacaatactaatgcaaacaacacaaccggtcttttccttcctatccctaattccactaacaat |
111 |
Q |
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| T |
8797339 |
tcatcataatgctcatcatccaataaattccaataacaacaatactaatgcaaacaacacaaccggtcttttccttcctatccctaattccactaacaat |
8797240 |
T |
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| Q |
112 |
aataacaatcactacaccaactgtaataacaacacctcttctatcatgcttcaaaataaccatcaaaacactcctggtttaggttactatttcatggaca |
211 |
Q |
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| T |
8797239 |
aataacaatcactacaccaactgtaataacaacacctcttctatcatgcttcaaaataaccatcaaaacactcctggtttaggttactatttcatggaca |
8797140 |
T |
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| Q |
212 |
acatcaacaaccatggaagctcttcttcctcttc |
245 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
8797139 |
acatcaacaaccatggaagctcttcttcctcttc |
8797106 |
T |
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