View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21302_high_1 (Length: 630)

Name: NF21302_high_1
Description: NF21302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21302_high_1
NF21302_high_1
[»] chr7 (47 HSPs)
chr7 (141-407)||(37284112-37284378)
chr7 (141-407)||(37289141-37289407)
chr7 (143-250)||(22661362-22661469)
chr7 (141-250)||(27479990-27480099)
chr7 (141-250)||(27480735-27480844)
chr7 (141-240)||(12930775-12930874)
chr7 (141-256)||(7158234-7158349)
chr7 (141-240)||(12929290-12929389)
chr7 (141-250)||(4227160-4227269)
chr7 (143-286)||(31695566-31695709)
chr7 (141-251)||(4226128-4226238)
chr7 (141-222)||(12643103-12643184)
chr7 (141-250)||(12644121-12644230)
chr7 (141-238)||(38643553-38643650)
chr7 (141-238)||(45915808-45915905)
chr7 (141-250)||(47558033-47558142)
chr7 (143-254)||(40021496-40021607)
chr7 (141-250)||(45914529-45914636)
chr7 (141-240)||(43937897-43937996)
chr7 (141-240)||(37563636-37563735)
chr7 (153-254)||(7159197-7159297)
chr7 (138-275)||(31694471-31694608)
chr7 (141-238)||(38644660-38644757)
chr7 (143-251)||(40022516-40022623)
chr7 (141-240)||(26825633-26825732)
chr7 (152-258)||(27557862-27557968)
chr7 (157-258)||(5636045-5636145)
chr7 (167-258)||(19979980-19980070)
chr7 (152-258)||(12931002-12931108)
chr7 (152-205)||(26825837-26825890)
chr7 (152-205)||(34454687-34454740)
chr7 (141-258)||(43938158-43938275)
chr7 (138-258)||(20947193-20947313)
chr7 (152-240)||(27558134-27558222)
chr7 (152-240)||(34454762-34454850)
chr7 (157-240)||(37563373-37563456)
chr7 (172-258)||(44545859-44545945)
chr7 (141-195)||(47121411-47121465)
chr7 (152-205)||(12929461-12929514)
chr7 (141-258)||(12929518-12929635)
chr7 (67-123)||(15134561-15134618)
chr7 (152-205)||(25049478-25049531)
chr7 (67-123)||(30095870-30095927)
chr7 (152-205)||(37563561-37563614)
chr7 (152-205)||(43938101-43938154)
chr7 (167-207)||(5280586-5280626)
chr7 (188-256)||(47738979-47739047)
[»] chr8 (63 HSPs)
chr8 (141-407)||(33497447-33497713)
chr8 (137-407)||(33497015-33497285)
chr8 (141-366)||(38598967-38599192)
chr8 (141-250)||(34665773-34665882)
chr8 (141-250)||(34214516-34214626)
chr8 (152-295)||(7393088-7393231)
chr8 (143-250)||(34666529-34666635)
chr8 (141-258)||(1231529-1231646)
chr8 (141-240)||(25288074-25288173)
chr8 (128-257)||(4970115-4970244)
chr8 (141-250)||(34213767-34213876)
chr8 (145-296)||(24378939-24379089)
chr8 (141-249)||(1232788-1232894)
chr8 (143-286)||(29574747-29574890)
chr8 (143-262)||(24377186-24377305)
chr8 (141-256)||(27436566-27436681)
chr8 (141-254)||(27437503-27437616)
chr8 (124-256)||(4463408-4463540)
chr8 (180-275)||(7392250-7392345)
chr8 (152-258)||(40422424-40422530)
chr8 (141-240)||(41801819-41801918)
chr8 (141-258)||(25287795-25287912)
chr8 (138-275)||(29575848-29575985)
chr8 (152-205)||(36623560-36623613)
chr8 (141-258)||(36623617-36623734)
chr8 (152-205)||(37342989-37343042)
chr8 (141-258)||(37343046-37343163)
chr8 (152-205)||(40525631-40525684)
chr8 (141-258)||(43866714-43866831)
chr8 (152-205)||(43866835-43866888)
chr8 (141-205)||(7589-7653)
chr8 (192-284)||(4462179-4462271)
chr8 (167-243)||(9632357-9632433)
chr8 (138-258)||(20096020-20096140)
chr8 (152-240)||(23424526-23424614)
chr8 (143-211)||(36574822-36574890)
chr8 (141-240)||(11478148-11478247)
chr8 (143-210)||(36576029-36576096)
chr8 (141-240)||(36623355-36623454)
chr8 (157-240)||(40525789-40525872)
chr8 (138-240)||(27857024-27857126)
chr8 (127-240)||(7675-7788)
chr8 (152-205)||(547642-547695)
chr8 (66-123)||(22486705-22486762)
chr8 (152-205)||(25287916-25287969)
chr8 (136-240)||(23424794-23424898)
chr8 (138-258)||(29190423-29190543)
chr8 (141-205)||(31690019-31690083)
chr8 (126-238)||(31690180-31690291)
chr8 (141-204)||(7396-7459)
chr8 (64-123)||(17786703-17786762)
chr8 (167-258)||(40525536-40525627)
chr8 (141-240)||(41182178-41182277)
chr8 (141-240)||(43866993-43867092)
chr8 (136-238)||(547429-547530)
chr8 (141-207)||(26740033-26740099)
chr8 (141-207)||(38600265-38600331)
chr8 (152-205)||(11478269-11478322)
chr8 (159-240)||(11478427-11478508)
chr8 (152-205)||(20096144-20096197)
chr8 (152-205)||(23424636-23424689)
chr8 (152-205)||(29190366-29190419)
chr8 (157-205)||(40422372-40422420)
[»] chr3 (49 HSPs)
chr3 (141-407)||(22736521-22736787)
chr3 (143-406)||(44476054-44476317)
chr3 (143-406)||(44481785-44482048)
chr3 (182-407)||(22735403-22735628)
chr3 (18-137)||(24251799-24251918)
chr3 (141-250)||(45279272-45279381)
chr3 (141-250)||(2944654-2944763)
chr3 (141-250)||(11026620-11026729)
chr3 (143-250)||(45278549-45278656)
chr3 (143-250)||(48188383-48188490)
chr3 (141-250)||(48189087-48189196)
chr3 (143-250)||(37249204-37249311)
chr3 (141-242)||(1757300-1757401)
chr3 (151-250)||(43105822-43105921)
chr3 (141-250)||(1756553-1756662)
chr3 (141-250)||(32717093-32717202)
chr3 (141-249)||(43105236-43105344)
chr3 (143-250)||(37249786-37249892)
chr3 (141-225)||(29193006-29193090)
chr3 (143-250)||(29192040-29192147)
chr3 (160-250)||(11025959-11026049)
chr3 (141-250)||(2943916-2944025)
chr3 (141-240)||(10998155-10998254)
chr3 (151-258)||(30890220-30890327)
chr3 (135-238)||(55036666-55036769)
chr3 (152-258)||(22129020-22129126)
chr3 (152-240)||(53037041-53037129)
chr3 (141-240)||(1741390-1741489)
chr3 (159-258)||(46670519-46670618)
chr3 (138-240)||(55036951-55037053)
chr3 (152-205)||(21300340-21300393)
chr3 (152-205)||(22129130-22129183)
chr3 (152-207)||(10749332-10749387)
chr3 (141-240)||(11312738-11312837)
chr3 (167-258)||(21255795-21255886)
chr3 (83-120)||(11383570-11383607)
chr3 (160-205)||(30890524-30890569)
chr3 (152-205)||(55036793-55036846)
chr3 (167-258)||(28310612-28310703)
chr3 (167-258)||(40256903-40256994)
chr3 (141-240)||(40257155-40257254)
chr3 (141-240)||(51279234-51279333)
chr3 (152-205)||(10749442-10749495)
chr3 (152-205)||(11312942-11312995)
chr3 (152-205)||(21255738-21255791)
chr3 (152-205)||(53037151-53037204)
chr3 (170-240)||(10997909-10997976)
chr3 (141-205)||(24576414-24576478)
chr3 (141-205)||(30803970-30804034)
[»] chr4 (52 HSPs)
chr4 (141-407)||(55012920-55013185)
chr4 (141-250)||(38813557-38813666)
chr4 (141-250)||(56556585-56556694)
chr4 (143-250)||(38982584-38982691)
chr4 (141-250)||(38814315-38814424)
chr4 (141-250)||(52816411-52816520)
chr4 (141-250)||(56557313-56557422)
chr4 (141-250)||(52815666-52815775)
chr4 (139-276)||(54590144-54590281)
chr4 (141-250)||(23455677-23455786)
chr4 (141-242)||(53477076-53477177)
chr4 (141-225)||(23454957-23455041)
chr4 (141-254)||(54591560-54591675)
chr4 (141-256)||(13336820-13336935)
chr4 (143-286)||(22882279-22882422)
chr4 (143-286)||(22933943-22934086)
chr4 (152-258)||(35730925-35731031)
chr4 (152-258)||(47862166-47862272)
chr4 (143-275)||(22881172-22881304)
chr4 (143-275)||(22932836-22932968)
chr4 (143-254)||(9254411-9254522)
chr4 (141-240)||(20086440-20086539)
chr4 (152-205)||(22249940-22249993)
chr4 (141-258)||(22249997-22250114)
chr4 (152-240)||(50245871-50245959)
chr4 (141-240)||(12691687-12691786)
chr4 (141-240)||(22249736-22249835)
chr4 (152-243)||(50246137-50246228)
chr4 (141-240)||(53559669-53559768)
chr4 (141-240)||(54961713-54961812)
chr4 (152-258)||(8286946-8287052)
chr4 (129-207)||(37677839-37677917)
chr4 (152-205)||(12691530-12691583)
chr4 (157-258)||(27813068-27813169)
chr4 (152-205)||(47862276-47862329)
chr4 (159-240)||(47862434-47862515)
chr4 (152-205)||(53559511-53559564)
chr4 (136-240)||(19916654-19916758)
chr4 (141-205)||(33294268-33294332)
chr4 (141-205)||(34238594-34238658)
chr4 (152-240)||(54961445-54961533)
chr4 (195-242)||(10128763-10128810)
chr4 (141-240)||(13872072-13872171)
chr4 (167-258)||(32846391-32846482)
chr4 (141-240)||(33294425-33294524)
chr4 (66-123)||(23870008-23870066)
chr4 (152-258)||(37678112-37678218)
chr4 (152-205)||(20086644-20086697)
chr4 (141-238)||(33294147-33294244)
chr4 (152-205)||(37678055-37678108)
chr4 (137-205)||(13872261-13872329)
chr4 (136-240)||(47981918-47982022)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-407)||(73107-73378)
[»] chr1 (66 HSPs)
chr1 (143-406)||(32619389-32619652)
chr1 (143-406)||(32622188-32622451)
chr1 (141-366)||(51935071-51935296)
chr1 (488-616)||(34791134-34791262)
chr1 (136-250)||(46282069-46282183)
chr1 (143-250)||(46282781-46282888)
chr1 (143-250)||(50062936-50063043)
chr1 (141-250)||(49093044-49093153)
chr1 (143-296)||(32238704-32238859)
chr1 (141-276)||(2828196-2828331)
chr1 (176-250)||(49093801-49093875)
chr1 (141-238)||(13295138-13295235)
chr1 (138-238)||(25065958-25066058)
chr1 (143-257)||(6345618-6345732)
chr1 (143-256)||(6344260-6344373)
chr1 (141-238)||(25064936-25065033)
chr1 (181-250)||(50062246-50062315)
chr1 (156-255)||(46544998-46545097)
chr1 (141-210)||(13295608-13295677)
chr1 (141-240)||(1047486-1047585)
chr1 (167-258)||(10019637-10019728)
chr1 (141-254)||(2829523-2829643)
chr1 (141-258)||(2953728-2953845)
chr1 (152-258)||(46849922-46850028)
chr1 (136-240)||(2953462-2953566)
chr1 (152-240)||(19755687-19755775)
chr1 (140-240)||(49002878-49002978)
chr1 (167-258)||(29980902-29980993)
chr1 (66-137)||(35405285-35405356)
chr1 (152-258)||(24701533-24701639)
chr1 (157-258)||(5183770-5183871)
chr1 (143-240)||(5926524-5926621)
chr1 (135-240)||(29980636-29980741)
chr1 (160-215)||(28534820-28534875)
chr1 (152-258)||(33347680-33347786)
chr1 (152-258)||(48380695-48380801)
chr1 (152-258)||(49003139-49003245)
chr1 (143-257)||(52563656-52563770)
chr1 (141-258)||(739222-739339)
chr1 (141-258)||(6056379-6056496)
chr1 (152-205)||(6056500-6056553)
chr1 (152-205)||(12577219-12577272)
chr1 (152-205)||(29042879-29042932)
chr1 (157-258)||(33030353-33030454)
chr1 (167-240)||(37152567-37152640)
chr1 (141-258)||(37152802-37152919)
chr1 (152-205)||(46364782-46364835)
chr1 (41-120)||(10976229-10976309)
chr1 (141-205)||(46364577-46364641)
chr1 (141-240)||(5183509-5183608)
chr1 (141-240)||(25414847-25414946)
chr1 (141-240)||(29043037-29043136)
chr1 (157-240)||(46849677-46849760)
chr1 (152-258)||(5926785-5926891)
chr1 (139-205)||(26953295-26953361)
chr1 (152-202)||(33347623-33347673)
chr1 (170-240)||(37152465-37152535)
chr1 (141-258)||(1040301-1040418)
chr1 (152-205)||(1040422-1040475)
chr1 (141-258)||(1047207-1047324)
chr1 (152-205)||(1047328-1047381)
chr1 (152-205)||(19755612-19755665)
chr1 (152-205)||(49003082-49003135)
chr1 (68-123)||(40877-40933)
chr1 (141-240)||(6056660-6056760)
chr1 (152-204)||(29980845-29980897)
[»] chr5 (56 HSPs)
chr5 (143-406)||(21977849-21978112)
chr5 (143-406)||(21972095-21972357)
chr5 (141-362)||(8654110-8654332)
chr5 (141-250)||(20072857-20072966)
chr5 (141-276)||(14744692-14744827)
chr5 (141-250)||(39181060-39181169)
chr5 (141-250)||(39181784-39181893)
chr5 (143-250)||(16532898-16533005)
chr5 (141-250)||(20072124-20072233)
chr5 (143-250)||(36476770-36476877)
chr5 (143-250)||(36477364-36477471)
chr5 (136-250)||(16533613-16533727)
chr5 (128-249)||(22870451-22870573)
chr5 (141-250)||(20856935-20857044)
chr5 (141-250)||(20857535-20857644)
chr5 (145-250)||(22869612-22869717)
chr5 (141-222)||(31107934-31108015)
chr5 (143-257)||(8673739-8673853)
chr5 (141-254)||(21978955-21979068)
chr5 (141-258)||(25253089-25253206)
chr5 (141-258)||(25316879-25316996)
chr5 (176-240)||(39402146-39402210)
chr5 (141-240)||(32052227-32052326)
chr5 (152-258)||(14745462-14745568)
chr5 (152-258)||(37945008-37945114)
chr5 (141-258)||(32052488-32052605)
chr5 (138-238)||(31108338-31108437)
chr5 (152-243)||(21260879-21260970)
chr5 (141-240)||(25253368-25253467)
chr5 (141-240)||(25317159-25317258)
chr5 (137-243)||(8323055-8323161)
chr5 (152-258)||(33735577-33735683)
chr5 (138-258)||(22533654-22533774)
chr5 (167-258)||(22024134-22024225)
chr5 (141-259)||(18934716-18934834)
chr5 (167-258)||(7015773-7015864)
chr5 (141-240)||(33735316-33735415)
chr5 (157-207)||(16117980-16118030)
chr5 (152-205)||(6421829-6421882)
chr5 (152-205)||(18013736-18013789)
chr5 (152-205)||(18934837-18934890)
chr5 (138-207)||(18935029-18935097)
chr5 (152-205)||(33735520-33735573)
chr5 (161-258)||(41339617-41339714)
chr5 (136-240)||(12991070-12991174)
chr5 (136-240)||(13064691-13064795)
chr5 (214-258)||(21978167-21978211)
chr5 (141-205)||(32052420-32052484)
chr5 (141-184)||(39402736-39402779)
chr5 (158-240)||(6421904-6421986)
chr5 (152-205)||(12990912-12990965)
chr5 (152-205)||(13064533-13064586)
chr5 (167-240)||(18013641-18013714)
chr5 (152-205)||(25253210-25253263)
chr5 (152-240)||(7015522-7015610)
chr5 (141-205)||(27753675-27753739)
[»] chr2 (53 HSPs)
chr2 (141-407)||(20101773-20102038)
chr2 (141-276)||(20103107-20103241)
chr2 (141-250)||(29957820-29957929)
chr2 (141-242)||(20982527-20982628)
chr2 (141-250)||(20983249-20983358)
chr2 (141-249)||(29958536-29958644)
chr2 (141-258)||(24387354-24387471)
chr2 (141-250)||(25624421-25624530)
chr2 (136-250)||(25623286-25623400)
chr2 (167-354)||(23206292-23206479)
chr2 (167-354)||(23677896-23678083)
chr2 (145-254)||(19620777-19620886)
chr2 (141-250)||(21103089-21103193)
chr2 (141-218)||(24388276-24388353)
chr2 (141-240)||(16366966-16367065)
chr2 (174-366)||(23183635-23183826)
chr2 (174-366)||(23594892-23595083)
chr2 (167-258)||(9694006-9694097)
chr2 (152-240)||(20911144-20911232)
chr2 (138-258)||(28599427-28599547)
chr2 (143-211)||(43236509-43236577)
chr2 (141-240)||(32519158-32519257)
chr2 (152-258)||(1149951-1150057)
chr2 (136-238)||(10446830-10446932)
chr2 (152-258)||(16367227-16367333)
chr2 (152-258)||(17366640-17366746)
chr2 (138-235)||(33881575-33881672)
chr2 (139-207)||(19606918-19606986)
chr2 (141-240)||(1150219-1150318)
chr2 (157-211)||(7981066-7981120)
chr2 (152-258)||(22309695-22309801)
chr2 (138-207)||(18476907-18476976)
chr2 (136-205)||(20911446-20911515)
chr2 (152-205)||(32519279-32519332)
chr2 (143-211)||(7983837-7983905)
chr2 (188-256)||(13646130-13646198)
chr2 (188-256)||(13652075-13652143)
chr2 (143-211)||(43237747-43237815)
chr2 (167-258)||(5608858-5608949)
chr2 (141-240)||(32519437-32519536)
chr2 (152-218)||(37985031-37985097)
chr2 (136-258)||(45663772-45663894)
chr2 (152-205)||(1150061-1150114)
chr2 (161-258)||(4375572-4375669)
chr2 (152-205)||(16367170-16367223)
chr2 (156-205)||(20911254-20911303)
chr2 (152-205)||(22731739-22731792)
chr2 (152-205)||(41846599-41846652)
chr2 (138-258)||(8089452-8089572)
chr2 (141-205)||(9693938-9694002)
chr2 (141-213)||(17284746-17284818)
chr2 (138-258)||(18477140-18477260)
chr2 (196-240)||(19619584-19619628)
[»] scaffold0182 (2 HSPs)
scaffold0182 (141-407)||(13137-13404)
scaffold0182 (141-333)||(14283-14474)
[»] chr6 (42 HSPs)
chr6 (141-363)||(17784260-17784482)
chr6 (141-250)||(33399969-33400078)
chr6 (135-250)||(1661418-1661533)
chr6 (141-250)||(14657197-14657306)
chr6 (141-250)||(4116802-4116911)
chr6 (141-250)||(4117535-4117644)
chr6 (141-248)||(33401116-33401223)
chr6 (144-222)||(8427381-8427459)
chr6 (141-250)||(14656483-14656592)
chr6 (141-240)||(5064338-5064437)
chr6 (141-254)||(8427203-8427316)
chr6 (141-258)||(13480211-13480328)
chr6 (141-258)||(23291747-23291864)
chr6 (141-240)||(13480490-13480589)
chr6 (141-240)||(15819772-15819871)
chr6 (141-240)||(30234874-30234973)
chr6 (141-258)||(737961-738078)
chr6 (141-258)||(3299823-3299940)
chr6 (137-258)||(5064599-5064720)
chr6 (167-256)||(32337833-32337922)
chr6 (60-123)||(13229262-13229326)
chr6 (172-240)||(20994973-20995041)
chr6 (141-204)||(13480333-13480396)
chr6 (136-258)||(31879456-31879577)
chr6 (138-240)||(32337564-32337666)
chr6 (152-205)||(23291868-23291921)
chr6 (152-240)||(9607598-9607686)
chr6 (141-205)||(20561123-20561187)
chr6 (136-240)||(21880362-21880466)
chr6 (161-256)||(1066405-1066500)
chr6 (157-240)||(22494162-22494245)
chr6 (141-240)||(23292026-23292125)
chr6 (152-258)||(7612562-7612668)
chr6 (141-207)||(20994822-20994888)
chr6 (152-258)||(31386813-31386919)
chr6 (152-205)||(737904-737957)
chr6 (59-123)||(10668988-10669053)
chr6 (152-205)||(21880571-21880624)
chr6 (152-205)||(22494004-22494057)
chr6 (152-205)||(32337688-32337741)
chr6 (152-204)||(5064542-5064594)
chr6 (157-205)||(19296439-19296487)
[»] scaffold0009 (2 HSPs)
scaffold0009 (141-276)||(261004-261139)
scaffold0009 (141-238)||(262441-262538)
[»] scaffold1493 (3 HSPs)
scaffold1493 (141-240)||(596-695)
scaffold1493 (141-240)||(875-974)
scaffold1493 (152-205)||(800-853)
[»] scaffold0347 (2 HSPs)
scaffold0347 (141-238)||(13612-13709)
scaffold0347 (141-238)||(14593-14690)
[»] scaffold0233 (2 HSPs)
scaffold0233 (167-258)||(8462-8553)
scaffold0233 (152-240)||(8714-8802)
[»] scaffold0206 (1 HSPs)
scaffold0206 (152-258)||(10339-10445)
[»] scaffold0279 (2 HSPs)
scaffold0279 (152-258)||(11121-11227)
scaffold0279 (152-240)||(10867-10955)
[»] scaffold0202 (2 HSPs)
scaffold0202 (137-258)||(14234-14355)
scaffold0202 (157-238)||(14518-14599)
[»] scaffold0321 (2 HSPs)
scaffold0321 (152-205)||(10786-10839)
scaffold0321 (141-205)||(10979-11043)
[»] scaffold0201 (1 HSPs)
scaffold0201 (173-258)||(14157-14242)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-122; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 141 - 407
Target Start/End: Original strand, 37284112 - 37284378
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |    
T  37284112 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37284211  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37284212 aaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatggagttttgtcaggacacgtcagcagatggcgag 37284311  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    |||||||||||||||||||||||||||| || | |||||||||||||| ||||||||||||||||||    
T  37284312 ggaaatgacatttttgcccttaatgagtttgttatcgcgcgcaatgaccattttacccctgcctcca 37284378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 141 - 407
Target Start/End: Complemental strand, 37289407 - 37289141
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |    
T  37289407 ttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37289308  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  37289307 aaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatggagttttgtcaggacacgtcagctgatggcgag 37289208  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    ||||||||||||||| |||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  37289207 ggaaatgacatttttacccttaatgagtctggaatcgcgcgcaatgaccattttacccctgcctcca 37289141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 22661362 - 22661469
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  243 attcgtcc 250  Q
     |||||||    
T  22661462 gttcgtcc 22661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 27479990 - 27480099
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  27479990 ttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatttga 27480089  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  27480090 aagttcgtcc 27480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 27480844 - 27480735
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  27480844 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatttga 27480745  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  27480744 aagttcgtcc 27480735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 12930775 - 12930874
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||    
T  12930775 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttga 12930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 7158234 - 7158349
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  7158234 ttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatttga 7158333  T
Q  241 aaattcgtcctaatta 256  Q
     |||  ||||||||||    
T  7158334 gaatcggtcctaatta 7158349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 12929290 - 12929389
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  12929290 ttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 12929389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 4227269 - 4227160
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||  | ||| ||||| |    
T  4227269 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatttaa 4227170  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  4227169 aatttcgtcc 4227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 31695709 - 31695566
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||||||||||  |||||||||| |||||||||||||| |||||||  ||||| ||||  |||||| ||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 31695610  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattag 286  Q
     || |||||||| |||    ||||||||||||||||||||||||    
T  31695609 tttggtcctaatcacatttttttgctgaggtggagggtaattag 31695566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 4226128 - 4226238
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||| || ||| |||||||||||| |||||||||||||||||  | ||||||||| |    
T  4226128 ttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatttaa 4226227  T
Q  241 aaattcgtcct 251  Q
    || ||||||||    
T  4226228 aatttcgtcct 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 12643103 - 12643184
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctg 222  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  12643103 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctg 12643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 12644230 - 12644121
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| |||||||||| |||||| ||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||  | ||||||||| |    
T  12644230 ttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcatttaa 12644131  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  12644130 aatttcgtcc 12644121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 38643553 - 38643650
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||||  | |||||||||    
T  38643553 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcattt 38643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 45915905 - 45915808
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||| |||||||||  | |||||||||    
T  45915905 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcattt 45915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 47558033 - 47558142
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||| || ||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||  | ||| ||||| |    
T  47558033 ttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatttaa 47558132  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  47558133 aatttcgtcc 47558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 40021496 - 40021607
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| |||||||||||||| ||||||||||||||  |||||||| | ||||| ||||| || | |||||||| ||| || || ||| |||||||||    
T  40021496 aaatatgcatttcatccctgtaaatataggtcatttgaaatttcatccataaacttgctaattcttctattttgccactgcaaatattaaacatttgaaa 40021595  T
Q  243 attcgtcctaat 254  Q
    ||||||||||||    
T  40021596 attcgtcctaat 40021607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 45914529 - 45914636
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||||||||| | ||||||||| ||| ||||||| ||||||||  | ||||||||| |    
T  45914529 ttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttg-ccctgtaaaaattaatcatttaa 45914626  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  45914627 aatttcgtcc 45914636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 43937897 - 43937996
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  43937897 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 37563735 - 37563636
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| |||||||||| || || ||||| |||||    
T  37563735 ttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcttttga 37563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 7159297 - 7159197
Alignment:
Q  153 ttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtccta 252  Q
    |||||||||| || ||||| |||||||| ||||| | |||||| |||||||||||||||||||  ||||| || || ||||||||||||  |||||||||    
T  7159297 ttcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccatttt-accctgcaaatattaatcatttgaattttcgtccta 7159199  T
Q  253 at 254  Q
    ||    
T  7159198 at 7159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 275
Target Start/End: Original strand, 31694471 - 31694608
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||| |||||||| ||||||||||| || |||||  |||||||  |||||||||| || ||||||||||||||||| |  || || ||||  |||||| |    
T  31694471 ggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcact 31694570  T
Q  238 tgaaaattcgtcctaattacaaaaatttgctgaggtgg 275  Q
    ||||| || ||||||||||||    |||||||||||||    
T  31694571 tgaaatttggtcctaattacatttttttgctgaggtgg 31694608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 38644757 - 38644660
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| |||||| | || |||||||||||||||||||||| |||||| | |||| ||||||| |||||||| || |||||  | |||||||||    
T  38644757 ttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcattt 38644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 40022623 - 40022516
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||  ||||||||||| || ||||| ||||||||  |||||||||||| |||||||||||| |||||||| | ||| || || ||| ||||||| |    
T  40022623 aaatatgtatttcatccctgcaaatatag-tcatttgaaatttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatttgaga 40022525  T
Q  243 attcgtcct 251  Q
    |||||||||    
T  40022524 attcgtcct 40022516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 26825633 - 26825732
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | |||||||| ||  | |||||||||||    
T  26825633 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatcatttga 26825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 27557862 - 27557968
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| ||||||||| |||||||||||||| ||||| ||| |||| ||| |||| || ||||||||||  || || || |||||||||||||| | ||| |    
T  27557862 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaaaatggtctt 27557961  T
Q  252 aattaca 258  Q
    |||||||    
T  27557962 aattaca 27557968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 5636045 - 5636145
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| || |||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||  || || || |||||||||||||| | ||||||||||    
T  5636045 tccctgcaaatataggtcatttgaattttcgtccctaaagttactaatccttcca-tttgccattgcaaatattaatcatttgaaaaatggtcctaatta 5636143  T
Q  257 ca 258  Q
    ||    
T  5636144 ca 5636145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 19979980 - 19980070
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| ||||||||| |||| ||||||||| | ||||||||||  || || || |||||||||||||| | ||| ||||||||    
T  19979980 tataggtcatttgaattttcatcc-tgaagttactaatcattccattttgccgttgcaaatattaatcatttgaaaaatggtcataattaca 19980070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 12931108 - 12931002
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || ||| |||||||||| ||||| |||||||| ||||||||||| ||| | ||||| || || || |||||||||||   || |||||    
T  12931108 tttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttggtcct 12931009  T
Q  252 aattaca 258  Q
    |||||||    
T  12931008 aattaca 12931002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 26825837 - 26825890
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  26825837 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 26825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 34454687 - 34454740
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  34454687 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 34454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 43938275 - 43938158
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| || || |||| | ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  43938275 ttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 43938176  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  43938175 cttttggtcctaattaca 43938158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 20947193 - 20947313
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| |  |||| |||||  || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||| ||  || || ||||||||    
T  20947193 ggtttaaataggtctttcgtcccttcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccactacaaatattaatcatt 20947292  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||||| | ||| ||||||||    
T  20947293 tgaaaaatggtcataattaca 20947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 27558222 - 27558134
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||||||||||| ||||| |||  ||| ||||||||||| ||||||||||  || || || |||||||||||    
T  27558222 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttga 27558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 34454850 - 34454762
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| ||  || | |||||||| || || |||||||||||    
T  34454850 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatattaatcatttga 34454762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 37563373 - 37563456
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| | | | |||||||| || || |||||||||||    
T  37563373 tccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatttga 37563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 44545945 - 44545859
Alignment:
Q  172 gtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||||||| ||||| |||||||| ||||||||||| | ||||| ||  || || || ||||||||| |||| | ||||||||||||    
T  44545945 gtcatttgaattttcgtccctgaagttactaatccttcaattttaccattgcaaatattaatcattttaaaaatggtcctaattaca 44545859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 47121465 - 47121411
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaa 195  Q
    ||||||| || ||||||||||| || |||||||||||||| ||||| ||||||||    
T  47121465 ttaaataggcctttcatccctgcaaatataggtcatttgaattttcgtccctgaa 47121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 12929461 - 12929514
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  12929461 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 12929635 - 12929518
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || ||| |||||||||| ||| | |||||||| | ||||||||| ||| | ||||| || || || |||||||||||    
T  12929635 ttaaatatgtctttcgtccctgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcatttga 12929536  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  12929535 cttttggtcctaattaca 12929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 15134618 - 15134561
Alignment:
Q  67 aggggcggccgccaaaggcatcacttttttaggg-caccaaaattattatttttactt 123  Q
    ||||||||| ||| | |||||||  ||||||||| |||||||||||||||||||||||    
T  15134618 aggggcggcagcccagggcatcaaatttttaggggcaccaaaattattatttttactt 15134561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 25049531 - 25049478
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| ||||||||| |||||||||||||| ||||  |||||||| |||||||||    
T  25049531 tttcgtccctgtaaatataggtcatttgaatttttctccctgaagttactaatc 25049478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 30095927 - 30095870
Alignment:
Q  67 aggggcggccgccaaaggcatcacttttttaggg-caccaaaattattatttttactt 123  Q
    ||||||||| ||| | |||| || |||||||||| |||||||||||||||||||||||    
T  30095927 aggggcggcagcccagggcaccatttttttaggggcaccaaaattattatttttactt 30095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 37563561 - 37563614
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||| ||||||| ||||| |||||||| |||||||||    
T  37563561 tttcatccctgcaaatatagggcatttgaattttcgtccctgaagttactaatc 37563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 43938101 - 43938154
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  43938101 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 43938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 5280626 - 5280586
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||||||| ||||| |||||||| |||||||||||    
T  5280626 tataggtcatttgaattttcgtccctgaagttactaatcct 5280586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 47739047 - 47738979
Alignment:
Q  188 tccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| | ||||||||||||||| |||||||||| || || |||||| || ||| || ||||||||||    
T  47739047 tccctgtatttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 47738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 141 - 407
Target Start/End: Complemental strand, 33497713 - 33497447
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  33497713 ttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattactaatcatttga 33497614  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33497613 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtggcattttgtgaatggagttttgtcaggacacgtcagcagatggcgag 33497514  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    |||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||| ||||||    
T  33497513 ggaaatgacatttttgcccttaatgagtctggactcgcgcgcaatgaccattttaccccttcctcca 33497447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 137 - 407
Target Start/End: Original strand, 33497015 - 33497285
Alignment:
Q  137 tggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcat 236  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| || |||||||||||||    
T  33497015 tggtataaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcat 33497114  T
Q  237 ttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatgg 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  33497115 ttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtgacatttggtgaatggagttttgtcaggacacgtcagcagatgg 33497214  T
Q  337 cgagggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    ||||||||||||||||||||||||||| |||| ||   |||| ||||||||| ||||||||||| ||||||    
T  33497215 cgagggaaatgacatttttgcccttaacgagtatggactcgcacgcaatgaccattttaccccttcctcca 33497285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 141 - 366
Target Start/End: Original strand, 38598967 - 38599192
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  38598967 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 38599066  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||| || ||||||  |||||| |||  |||||||||||||  | |||||| ||| |     
T  38599067 aaattcgtcctaattaaaaaaatatgctgaggtggatggtaattagataagtggcaaatggtgactgggtttttgtcaggacatgtaagcagaaggcaaa 38599166  T
Q  341 ggaaatgacatttttgcccttaatga 366  Q
     | |||||||||||| ||||||||||    
T  38599167 tgcaatgacatttttacccttaatga 38599192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 34665773 - 34665882
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34665773 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 34665872  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  34665873 aagttcgtcc 34665882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 34214626 - 34214516
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttca-tccctgaacttactaatcctcccattttgcccctgtaattactaatcatttg 239  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34214626 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 34214527  T
Q  240 aaaattcgtcc 250  Q
    ||| |||||||    
T  34214526 aaagttcgtcc 34214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 152 - 295
Target Start/End: Complemental strand, 7393231 - 7393088
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || || ||||||||||||| || |||||    
T  7393231 tttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcct 7393132  T
Q  252 aattacaaaaatttgctgaggtggagggtaattaggtacgtggc 295  Q
    ||| ||||   ||||||||||||||| || |||||  |||||||    
T  7393131 aatcacaattgtttgctgaggtggagagtgattagcaacgtggc 7393088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 34666635 - 34666529
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaa 34666537  T
Q  243 attcgtcc 250  Q
     |||||||    
T  34666536 gttcgtcc 34666529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 1231529 - 1231646
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||  ||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |||||||||  | |||||||||||    
T  1231529 ttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatttga 1231628  T
Q  241 aaattcgtcctaattaca 258  Q
    ||||||||||||||||||    
T  1231629 aaattcgtcctaattaca 1231646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 25288173 - 25288074
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  25288173 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 25288074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 4970115 - 4970244
Alignment:
Q  128 atatatatatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaatt 227  Q
    |||||||||||| | |||||||| ||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||| |||||||||||||| || |    
T  4970115 atatatatatggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaat 4970214  T
Q  228 actaatcatttgaaaattcgtcctaattac 257  Q
    | ||| ||||||||| || |||||||||||    
T  4970215 attaagcatttgaaatttagtcctaattac 4970244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 34213767 - 34213876
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||    |||||||||||    
T  34213767 ttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 34213866  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  34213867 aagttcgtcc 34213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 145 - 296
Target Start/End: Complemental strand, 24379089 - 24378939
Alignment:
Q  145 atatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaat 244  Q
    |||||| ||||||||||| |||||  ||||||||||| |||||||| |||||||||||||||||| |||||||||||| || ||  || ||||| |||||    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaaataaaaagcattttaaaat 24378990  T
Q  245 tcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggca 296  Q
    |||||||||||| ||||| ||| ||||||||| |  |||||| |||||||||    
T  24378989 tcgtcctaatta-aaaaaattgttgaggtggatgaaaattagatacgtggca 24378939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 1232894 - 1232788
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||    |||||||||||||||||||||||  | |||||||||||    
T  1232894 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcatttga 1232797  T
Q  241 aaattcgtc 249  Q
    |||||||||    
T  1232796 aaattcgtc 1232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 143 - 286
Target Start/End: Original strand, 29574747 - 29574890
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||||||||||  |||||||||| |||||||||||||| |||||||  ||||| ||||  |||||| ||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 29574846  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattag 286  Q
     || |||||||| |||    ||||||||||||||||||||||||    
T  29574847 tttggtcctaatcacatttttttgctgaggtggagggtaattag 29574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 24377186 - 24377305
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| |||||| | || |||||  ||||||||||  ||||||||||||||||||||||||||||||||| |||||| || || ||| ||||| |||    
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcatttcaaa 24377285  T
Q  243 attcgtcctaattacaaaaa 262  Q
    |||||||||||||| |||||    
T  24377286 attcgtcctaattaaaaaaa 24377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 27436566 - 27436681
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| || |||||||| ||||| ||||| |||||||| ||||||||| |  ||||||||| ||| |||||||||||||||||    
T  27436566 ttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27436665  T
Q  241 aaattcgtcctaatta 256  Q
    || || ||||||||||    
T  27436666 aatttagtcctaatta 27436681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 27437616 - 27437503
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| || |||||| | ||||| ||||| |||||||| ||||||||| |  ||||||||| ||| |||||||||||||||||    
T  27437616 ttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27437517  T
Q  241 aaattcgtcctaat 254  Q
    || || ||||||||    
T  27437516 aatttagtcctaat 27437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 4463540 - 4463408
Alignment:
Q  124 cgtaatatatatatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgt 223  Q
    ||||||||| | | || |||||||||| ||||||||||| || |||||| |||||||  ||||||||||||||||||||||||||| ||| |  |||||     
T  4463540 cgtaatataaacaaggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcctattctttccctgc 4463441  T
Q  224 aattactaatcatttgaaaattcgtcctaatta 256  Q
    ||||  |||||| |||||| || ||||||||||    
T  4463440 aattgttaatcacttgaaatttggtcctaatta 4463408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 7392250 - 7392345
Alignment:
Q  180 atttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtgg 275  Q
    ||||||||||||||||||||||||||||||||||||  ||||| || || ||||||||||||| || |||||||| || |   |||||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcctaatcacgattgtttgctgaggtgg 7392345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 40422530 - 40422424
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| ||||||||||| | | | |||| ||| || || |||||||||||||| | |||||    
T  40422530 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaaaaatggtcct 40422431  T
Q  252 aattaca 258  Q
    |||||||    
T  40422430 aattaca 40422424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 41801819 - 41801918
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| |||||| || |||||||||||||| ||||| | |||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  41801819 ttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 41801918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 25287795 - 25287912
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| ||| || ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  25287795 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 25287894  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  25287895 cttttggtcctaattaca 25287912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 29575985 - 29575848
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||| |||||||| ||||||||||| || |||||  |||||||  |||||||||| || ||||||||||||||||| |  || || ||||  |||||| |    
T  29575985 ggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcact 29575886  T
Q  238 tgaaaattcgtcctaattacaaaaatttgctgaggtgg 275  Q
    ||||| || ||||||||||||    |||||||||||||    
T  29575885 tgaaatttggtcctaattacatttttttgctgaggtgg 29575848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 36623734 - 36623617
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| |||||||| || ||| | |||||||| || || |||||||||||    
T  36623734 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 36623635  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  36623634 cttttggtcctaattaca 36623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 37342989 - 37343042
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  37342989 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 37343163 - 37343046
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  ||||  ||||| || |||||||||||||| ||||| |||||||| |||||||| || ||| | |||||||| || || |||||||||||    
T  37343163 ttaaatatgtctttcgcccctgcaaatataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 37343064  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  37343063 cttttggtcctaattaca 37343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 40525684 - 40525631
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||    
T  40525684 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 40525631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 43866714 - 43866831
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| |||||||| || ||| | |||||||| || || |||||||||||    
T  43866714 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 43866813  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  43866814 cttttggtcctaattaca 43866831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 43866888 - 43866835
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  43866888 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 7589 - 7653
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| || |||||||||||||| |||||||||||||| ||||| |||||||| | |||||||    
T  7589 ttaaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctgaagtcactaatc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 4462179 - 4462271
Alignment:
Q  192 tgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaatt 284  Q
    |||||||||||||||||||||| |  ||||| ||||  |||||| |||||| || |||||||| |||    ||||||||||||||||||||||    
T  4462179 tgaacttactaatcctcccattctttccctgcaattgttaatcacttgaaatttggtcctaatcacatttttttgctgaggtggagggtaatt 4462271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 9632357 - 9632433
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaa 243  Q
    |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |  || || || ||||||||||||||    
T  9632357 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaaa 9632433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 20096020 - 20096140
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| |  |||| |||||| || |||| ||||||||| ||||  |||||||| ||||||||||| ||| |||||| ||| || || ||||||||    
T  20096020 ggtttaaataggtctttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatt 20096119  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||   || ||||||||||||    
T  20096120 tgacttttggtcctaattaca 20096140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 23424526 - 23424614
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||| |||||||||||||| ||||  |||||||| |||||||| ||  || | |||||||| || || |||||||||||    
T  23424526 tttcatccctgtaaatataggtcatttgaatttttgtccctgaagttactaattctaacaatctgcccctgcaaatattaatcatttga 23424614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 36574822 - 36574890
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccca 211  Q
    |||||||| ||||||| ||| |  |||||| |||||||  |||||||||||||||||||||||||||||    
T  36574822 aaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 11478148 - 11478247
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| ||| |||| |||||||||||  || | |||||||| || || |||||||||||    
T  11478148 ttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 11478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 36576096 - 36576029
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccc 210  Q
    |||||||  |||||||||||||| |||| | |||||||  |||||||||||||||||| |||||||||    
T  36576096 aaatatgtatttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 36623355 - 36623454
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| |||||| || |||||| ||||||| ||||| |||||||| |||||||||||  || | ||| |||| || || |||||||||||    
T  36623355 ttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcatttga 36623454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 40525872 - 40525789
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||||| |||||| ||||| |||||||| ||||||||| | ||| | |||||||| || || |||||||||||    
T  40525872 tccctgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcatttga 40525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 27857126 - 27857024
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||| | ||| | ||||| || || || ||||||||    
T  27857126 ggtttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatt 27857027  T
Q  238 tga 240  Q
    |||    
T  27857026 tga 27857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 7788 - 7675
Alignment:
Q  127 aatatatatatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaat 226  Q
    |||||||| | || ||||||| |  |||| |||||| || |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | |||||||| ||     
T  7788 aatatatagaaggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaa 7689  T
Q  227 tactaatcatttga 240  Q
    || |||||||||||    
T  7688 tattaatcatttga 7675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 547642 - 547695
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||| |||||||||    
T  547642 tttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 22486762 - 22486705
Alignment:
Q  66 gaggggcggccgccaaaggcatcacttttttagggcaccaaaattattatttttactt 123  Q
    |||||||||| ||| | ||||||| |||||||||| ||||||||||||||| ||||||    
T  22486762 gaggggcggcagcccagggcatcatttttttagggtaccaaaattattattcttactt 22486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 25287969 - 25287916
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  25287969 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 25287916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 23424898 - 23424794
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| | |||| || |||||| ||||||| ||||| |||||||| ||||||||| | ||| | |||||||| || || ||||||    
T  23424898 atggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatca 23424799  T
Q  236 tttga 240  Q
    |||||    
T  23424798 tttga 23424794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 29190543 - 29190423
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| |  |||| |||||| || |||||  ||||||| |||| ||| ||||| ||||||||||| ||| | |||||||| || || ||||||||    
T  29190543 ggtttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 29190444  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||   || ||||||||||||    
T  29190443 tgacttttagtcctaattaca 29190423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 31690083 - 31690019
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  31690083 ttaaataggtttttcgtccctgaaaatataggtcatttgaattttcgtccctgaagttactaatc 31690019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 31690291 - 31690180
Alignment:
Q  126 taatatatatatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaa 225  Q
    ||||| |||||||  |||||||||  |||| ||||||||| ||||||||| |||| ||||| |||||||| ||||||||| | ||| | |||| ||| ||    
T  31690291 taataaatatatgacttaaatatgtatttcgtccctgtaaatataggtca-ttgaattttcgtccctgaagttactaatcattccaatctgccactgcaa 31690193  T
Q  226 ttactaatcattt 238  Q
     || |||||||||    
T  31690192 atattaatcattt 31690180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 7396 - 7459
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaat 204  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||    
T  7396 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagttactaat 7459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 17786762 - 17786703
Alignment:
Q  64 gggaggggcggccgccaaaggcatcacttttttagggcaccaaaattattatttttactt 123  Q
    ||||||| ||||| || || ||| || |||||||||||||||||||||||||||| ||||    
T  17786762 gggagggtcggccacctaatgcaacaattttttagggcaccaaaattattattttaactt 17786703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 40525536 - 40525627
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||| ||||||||| ||||| |||||||| ||||||||||| ||| | |||| ||| || || |||||||||||   || ||||||||||||    
T  40525536 tatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaattaca 40525627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 41182277 - 41182178
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||| ||||||||| ||||| |||||||| ||||||||| |  || | |||||||| || || |||||||||||    
T  41182277 ttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatcatttga 41182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 43867092 - 43866993
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| |||||| || |||||  ||||||| ||||| ||| |||| |||||||||||  || | |||||||| || || |||||||||||    
T  43867092 ttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 43866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 547429 - 547530
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| ||||||||||||| | |||||| || |||||| ||||| | ||||  |||||||| ||||||||||| ||| | |||||||| || || ||||||    
T  547429 atggcttaaatatgcttt-cgtccctgcaaatataggccatttaaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 547527  T
Q  236 ttt 238  Q
    |||    
T  547528 ttt 547530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 26740099 - 26740033
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||| |||| |||||||||||    
T  26740099 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 26740033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 38600331 - 38600265
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    ||||||| || |||| |||||| || ||||||||||||||  |||| |||||||| |||||||||||    
T  38600331 ttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcct 38600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 11478322 - 11478269
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| || ||||| |||||||||    
T  11478322 tttcatccctgcaaatataggtcatttgaattttcgtcgctgaagttactaatc 11478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 11478508 - 11478427
Alignment:
Q  159 cctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||| |||||  |||||||  |||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  11478508 cctgtaaatatagaccatttgaactttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 11478427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 20096197 - 20096144
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  20096197 tttcatccctacaaatataggtcatttgaattttcttccctgaagttactaatc 20096144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 23424689 - 23424636
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || ||||| |||||||| ||||| |||||||| |||||||||    
T  23424689 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaatc 23424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 29190366 - 29190419
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||||| || |||||||||    
T  29190366 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 29190419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 40422372 - 40422420
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  40422372 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 40422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 141 - 407
Target Start/End: Complemental strand, 22736787 - 22736521
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22736787 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 22736688  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||     
T  22736687 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggtgaatgggattttgtcaggacacatcagcagatggcgat 22736588  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||||  |||||||||||||||||    
T  22736587 ggaaattacatttttgcccttaatgagtctggcttcacgcgcaatgaccgttttacccctgcctcca 22736521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 143 - 406
Target Start/End: Original strand, 44476054 - 44476317
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttgaaa 44476153  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| || |||| ||| |||||| |||||||||||||||||||| |||||    
T  44476154 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttagtgactggggttttggcaggacacatcagcagatggggaggg 44476253  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  44476254 aaatgacaattttgcccttaatgagtctggtttcgcgcggaatgaccgttttacccctgcctcc 44476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 143 - 406
Target Start/End: Complemental strand, 44482048 - 44481785
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 44481949  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| || |||| ||| |||||| |||||||||||||||||||| |||||    
T  44481948 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttagtgactggggttttggcaggacacatcagcagatggggaggg 44481849  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||| ||||| ||| ||||||  ||||||||||||||||    
T  44481848 aaatgacaattttgcccttaatgagtctggtttcgtgcggaatgaccgttttacccctgcctcc 44481785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 182 - 407
Target Start/End: Original strand, 22735403 - 22735628
Alignment:
Q  182 ttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggta 281  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggta 22735502  T
Q  282 attaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgagggaaatgacatttttgcccttaatgagtctgatttcgcgcg 381  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||  ||| ||||    
T  22735503 attagctacgtggcatttggtgaatggggttttgtcaggacacatcagaagatgacgatggaaatgacatttttgcccttaatgagtctggcttcacgcg 22735602  T
Q  382 caatgactattttacccctgcctcca 407  Q
    |||||||  |||||||||||||||||    
T  22735603 caatgaccgttttacccctgcctcca 22735628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 24251799 - 24251918
Alignment:
Q  18 aagtatagtatcgttgatagtcgtagggatggccctgagcatgggcgggaggggcggccgccaaaggcatcacttttttagggcaccaaaattattattt 117  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24251799 aagtgtagtatcgttgatagtcgtaggggtggccctgagcatgggcgagaagggcggccgccaaaggcatcaattttttagggcaccaaaattattattt 24251898  T
Q  118 ttacttcgtaatatatatat 137  Q
    ||||||||||||||||||||    
T  24251899 ttacttcgtaatatatatat 24251918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 45279381 - 45279272
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45279381 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 45279282  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  45279281 aagttcgtcc 45279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 2944763 - 2944654
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2944763 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatttga 2944664  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  2944663 aagttcgtcc 2944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 11026729 - 11026620
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  11026729 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatttga 11026630  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  11026629 aagttcgtcc 11026620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 45278549 - 45278656
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  243 attcgtcc 250  Q
     |||||||    
T  45278649 gttcgtcc 45278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 48188383 - 48188490
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  243 attcgtcc 250  Q
     |||||||    
T  48188483 gttcgtcc 48188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 48189196 - 48189087
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  48189196 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatttga 48189097  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  48189096 aagttcgtcc 48189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 37249204 - 37249311
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  243 attcgtcc 250  Q
     |||||||    
T  37249304 gttcgtcc 37249311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 1757401 - 1757300
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1757401 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1757302  T
Q  241 aa 242  Q
    ||    
T  1757301 aa 1757300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 43105921 - 43105822
Alignment:
Q  151 ttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 250  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  43105921 ttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtcc 43105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 1756553 - 1756662
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||  ||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1756553 ttaaatatatttttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1756652  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  1756653 aagttcgtcc 1756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 32717202 - 32717093
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||  | ||||||||| |    
T  32717202 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatttaa 32717103  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  32717102 aatttcgtcc 32717093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 43105236 - 43105344
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  43105236 ttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttttga 43105335  T
Q  241 aaattcgtc 249  Q
    || ||||||    
T  43105336 aagttcgtc 43105344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 37249892 - 37249786
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||||||||||||| || ||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  37249892 aaatatgcttttcatcc-tgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  243 attcgtcc 250  Q
     |||||||    
T  37249793 gttcgtcc 37249786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 29193090 - 29193006
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaa 225  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29193090 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaa 29193006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 29192040 - 29192147
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| || ||||||||||||||  | ||||||||| |||    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  243 attcgtcc 250  Q
     |||||||    
T  29192140 tttcgtcc 29192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 11025959 - 11026049
Alignment:
Q  160 ctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 250  Q
    ||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||    
T  11025959 ctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtcc 11026049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 2943916 - 2944025
Alignment:
Q  141 ttaaatatgcttttc-atccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttg 239  Q
    ||||||||||||||| ||||||| ||||||||| | ||||||||||||||| ||| |||||||||||||| |||||||||||||||    ||||||||||    
T  2943916 ttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcatttg 2944014  T
Q  240 aaaattcgtcc 250  Q
    ||| |||||||    
T  2944015 aaagttcgtcc 2944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 10998254 - 10998155
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| || ||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  10998254 ttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 30890220 - 30890327
Alignment:
Q  151 ttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 250  Q
    ||||| ||||| ||| ||||| |||||||| |||||||| ||||| ||||||||| | | ||||||||  ||||| || |||||||||||||| | ||||    
T  30890220 ttttcgtccctataaatatagatcatttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaaaaatggtcc 30890319  T
Q  251 taattaca 258  Q
    ||||||||    
T  30890320 taattaca 30890327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 55036666 - 55036769
Alignment:
Q  135 tatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatc 234  Q
    ||||||||||||| |  |||| |||||| || |||||||||||||| ||||||| |||||| ||||||||||| ||| | |||||||| || || |||||    
T  55036666 tatggtttaaataggtctttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatc 55036765  T
Q  235 attt 238  Q
    ||||    
T  55036766 attt 55036769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 22129020 - 22129126
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    ||||||||| |||| ||||||  |||||| ||||| || ||||| ||||||||||| ||| |||||||||| || || |||||||||||   ||||||||    
T  22129020 tttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttcgtcct 22129119  T
Q  252 aattaca 258  Q
    |||||||    
T  22129120 aattaca 22129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 53037041 - 53037129
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | | |||||| || || || ||||||||    
T  53037041 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatacccctgcaaatattagtcatttga 53037129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 1741390 - 1741489
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| || || || |||||||||||    
T  1741390 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 1741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 46670618 - 46670519
Alignment:
Q  159 cctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||| || |||||||| |  || || || ||||||||| |||| | ||| ||||||||    
T  46670618 cctgtaaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaaaaaatggtcataattaca 46670519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 55037053 - 55036951
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||||  |||| |||||| || |||||||||||||| ||||| | | |||| ||||||||||| ||| | |||||||| || || ||||||||    
T  55037053 ggtttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatt 55036954  T
Q  238 tga 240  Q
    |||    
T  55036953 tga 55036951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21300340 - 21300393
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  21300340 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 22129183 - 22129130
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||    
T  22129183 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 22129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 10749332 - 10749387
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  10749332 tttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcct 10749387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 11312738 - 11312837
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||| ||| |||||||||||||| ||||| |||||||| |||| ||||||  || | |||||||| || || |||||||||||    
T  11312738 ttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatcatttga 11312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 21255886 - 21255795
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||| |||||||| ||||| ||| | || |||||||| || ||||||||||  ||||| || |||||||||||||| | ||||||||||||    
T  21255886 tatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcatttgaaaaatggtcctaattaca 21255795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 11383570 - 11383607
Alignment:
Q  83 ggcatcacttttttagggcaccaaaattattattttta 120  Q
    |||| |||||||||||||||||||||||||||||||||    
T  11383570 ggcaccacttttttagggcaccaaaattattattttta 11383607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 30890569 - 30890524
Alignment:
Q  160 ctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||    
T  30890569 ctgtaaatataggtcatttgaattttcatccctgaagttactaatc 30890524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 55036846 - 55036793
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  55036846 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 55036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 28310703 - 28310612
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| | |||  |||| || ||||||||| | ||||||||||  || || || |||||||||||||| | ||||||||||||    
T  28310703 tataggtcatttgaatcttcgaccctaaagttactaatctttccattttgccattgcaaatattaatcatttgaaaaatggtcctaattaca 28310612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 40256903 - 40256994
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||||| |||||| ||||| |||||||| ||||||||||| ||| | ||||| || || || |||||||||||   || ||||||||||||    
T  40256903 tataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgacttttggtcctaattaca 40256994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 40257254 - 40257155
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| ||||| ||| |||| || |||||| ||||| |||||||| ||||||||| |  || | |||||||| || || |||||||||||    
T  40257254 ttaaatatgtttttcgtccctataaatataagttatttgaattttcgtccctgaaattactaatcatttcaatctgcccctgcaaatattaatcatttga 40257155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 51279234 - 51279333
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || ||||||| |||||| ||||| |||| ||| ||||||||| |  || |||||||||| || || |||||||||||    
T  51279234 ttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatcatttga 51279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 10749495 - 10749442
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||| | ||||| |||||||| |||||||||    
T  10749495 tttcatccctgcaaatataggtcatttaaattttcgtccctgaagttactaatc 10749442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 11312942 - 11312995
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||| || || |||||||||||||| ||||| |||||||| |||||||||    
T  11312942 tttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 11312995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21255738 - 21255791
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||| ||||||||| ||||||| |||||| |||||||||    
T  21255738 tttcatccctgcaaatataagtcatttgaattttcattcctgaagttactaatc 21255791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 53037204 - 53037151
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||| || || |||||||||||||| ||||| |||||||| |||||||||    
T  53037204 tttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 10997909 - 10997976
Alignment:
Q  170 aggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||| ||||| |||||||| ||||||||||| ||| ||   |||||||| || |||||||||||    
T  10997909 aggtcatttgaattttcgtccctgaagttactaatccttccaatt---ccctgtaaatattaatcatttga 10997976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 24576478 - 24576414
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| |||||||| |||| ||||    
T  24576478 ttaaataagtttttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttacaaatc 24576414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 30804034 - 30803970
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| |||| ||| |||||||||    
T  30804034 ttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtcccggaagttactaatc 30803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-110; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 141 - 407
Target Start/End: Complemental strand, 55013185 - 55012920
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  55013185 ttaaatatgcttttcatccatgtaattataggctatttgatttttcatcc-tgagcttactaatcctcccagtttgcccctgtaattactaatcatttga 55013087  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||    
T  55013086 aaattcgtcctaattacaaaaatttgccgaggtggagggtaattaggtacgtggcatttgatgaatggagttttgtcaagacacatcagcagatggcaag 55012987  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||  ||| |||||||||||||    
T  55012986 ggaaatgacatttttgtccttaatgagtctggtttcgcgcgcaatgaccgtttgacccctgcctcca 55012920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 38813557 - 38813666
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  38813557 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatttga 38813656  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  38813657 aagttcgtcc 38813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 56556585 - 56556694
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  56556585 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 56556684  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  56556685 aagttcgtcc 56556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 38982691 - 38982584
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  243 attcgtcc 250  Q
     |||||||    
T  38982591 gttcgtcc 38982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 38814424 - 38814315
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38814424 ttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 38814325  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  38814324 aagttcgtcc 38814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 52816520 - 52816411
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52816520 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatttga 52816421  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  52816420 aagttcgtcc 52816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 56557422 - 56557313
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  56557422 ttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 56557323  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  56557322 aagttcgtcc 56557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 52815666 - 52815775
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  52815666 ttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcacttga 52815765  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  52815766 aagttcgtcc 52815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 54590144 - 54590281
Alignment:
Q  139 gtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||| || |||||||||| ||  || || |||||||||    
T  54590144 gtttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcattt 54590243  T
Q  239 gaaaattcgtcctaattacaaaaatttgctgaggtgga 276  Q
    |||  ||||||||||||| ||||||||||| |||||||    
T  54590244 gaattttcgtcctaattaaaaaaatttgcttaggtgga 54590281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 23455786 - 23455677
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||  | ||||||||| |    
T  23455786 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatttca 23455687  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  23455686 aatttcgtcc 23455677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 53477177 - 53477076
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||    
T  53477177 ttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 53477078  T
Q  241 aa 242  Q
    ||    
T  53477077 aa 53477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 23454957 - 23455041
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaa 225  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  23454957 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaa 23455041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 54591675 - 54591560
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctg--taattactaatcattt 238  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||   || || |||||||||    
T  54591675 ttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaatattaatcattt 54591576  T
Q  239 gaaaattcgtcctaat 254  Q
    |||  |||||||||||    
T  54591575 gaattttcgtcctaat 54591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 13336935 - 13336820
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||| |  ||||| ||||  |||||| ||||    
T  13336935 ttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccattctttccctgcaattgttaatcacttga 13336836  T
Q  241 aaattcgtcctaatta 256  Q
    || || ||||| ||||    
T  13336835 aatttggtccttatta 13336820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 22882422 - 22882279
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||||||||||  ||||||||||||||||| ||||||||||||| |  ||||| ||||  |||||| || |||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcacttcaaa 22882323  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattag 286  Q
     || ||| |||| |||    ||||||||||||||||||||||||    
T  22882322 tttggtcataatcacatttttttgctgaggtggagggtaattag 22882279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 22934086 - 22933943
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||||||||||  ||||||||||||||||| ||||||||||||| |  ||||| ||||  |||||| || |||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcacttcaaa 22933987  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattag 286  Q
     || ||| |||| |||    ||||||||||||||||||||||||    
T  22933986 tttggtcataatcacatttttttgctgaggtggagggtaattag 22933943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 35731031 - 35730925
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||||| || |  || || || |||||||||||||| | |||||    
T  35731031 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaaaaatagtcct 35730932  T
Q  252 aattaca 258  Q
    |||||||    
T  35730931 aattaca 35730925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 47862166 - 47862272
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    ||||||||||| || |||| ||||||||| ||||| || ||||| ||||||||||| ||| | |||||||| || ||||||||||||||   || |||||    
T  47862166 tttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatttgactttttgtcct 47862265  T
Q  252 aattaca 258  Q
    |||||||    
T  47862266 aattaca 47862272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 22881172 - 22881304
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| |||||||||||||| |||||| |||||||  ||||||| ||| | ||||||||||||||||| |   |||  ||||  |||||| ||||||    
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22881271  T
Q  243 attcgtcctaattacaaaaatttgctgaggtgg 275  Q
     || ||||||||||||    |||||||||||||    
T  22881272 tttggtcctaattacatttttttgctgaggtgg 22881304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 22932836 - 22932968
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| |||||||||||||| |||||| |||||||  ||||||| ||| | ||||||||||||||||| |   |||  ||||  |||||| ||||||    
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22932935  T
Q  243 attcgtcctaattacaaaaatttgctgaggtgg 275  Q
     || ||||||||||||    |||||||||||||    
T  22932936 tttggtcctaattacatttttttgctgaggtgg 22932968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 9254411 - 9254522
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || |||||| |||||||  |||||||| |||||||||||||||||  ||| |  ||||| ||||  |||||| ||||||    
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctcttattatttccctgcaattgttaatcacttgaaa 9254510  T
Q  243 attcgtcctaat 254  Q
     || ||||||||    
T  9254511 tttggtcctaat 9254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 20086440 - 20086539
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| || || ||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  20086440 ttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 22249940 - 22249993
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  22249940 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 22250114 - 22249997
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| |||||||| || ||| | |||||||| || || |||||||||||    
T  22250114 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 22250015  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  22250014 cttttagtcctaattaca 22249997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 50245871 - 50245959
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| ||||||||| |||||||||||||| ||||||||| |||| ||||||||| | ||| | |||| ||| || || |||||||||||    
T  50245871 tttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 50245959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 12691786 - 12691687
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||  |||||||| ||||||||||| ||| |  ||||||| || || |||||||||||    
T  12691786 ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga 12691687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 22249736 - 22249835
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| |||||| || ||||| |||||||| ||||| ||| |||| |||||||||||  || | |||||||| || || |||||||||||    
T  22249736 ttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 22249835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 50246228 - 50246137
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaa 243  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | || | ||| || || ||||||||||||||    
T  50246228 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgtcactgcaaatattaatcatttgaaaa 50246137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 53559768 - 53559669
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||| | ||| | |||||||| || || |||||||||||    
T  53559768 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcatttga 53559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 54961812 - 54961713
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||  |||||||| |||||||||||  || | |||||| |||| || |||||||||||    
T  54961812 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttagtccctgaagttactaatcctttcaatctgcccccgtaaatattaatcatttga 54961713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 8286946 - 8287052
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||| | ||||||| ||||| || ||||| ||| ||||||| ||||||||||  || || || |||||||||||||| | |||||    
T  8286946 tttcgtccctgcaaatataagccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatcatttgaaaaatggtcct 8287045  T
Q  252 aattaca 258  Q
    |||||||    
T  8287046 aattaca 8287052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 37677839 - 37677917
Alignment:
Q  129 tatatatatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    ||||| ||||| ||||||| |  |||| |||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  37677839 tatatttatggcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 37677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 12691583 - 12691530
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  12691583 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 27813068 - 27813169
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| || |||| ||||||||| |||| |||| |||| ||||| ||||| |||||||| |  || || ||||||||||||||||| | || |||||||    
T  27813068 tccctgcaaatataagtcatttgaatttttatccatgaagttactgatccttccattttgtcattgcaaatactaatcatttgaaaaatggttctaatta 27813167  T
Q  257 ca 258  Q
    ||    
T  27813168 ca 27813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 47862329 - 47862276
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  47862329 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 47862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 47862515 - 47862434
Alignment:
Q  159 cctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| | | |||||||||| || || |||||||||||    
T  47862515 cctgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcatttga 47862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 53559564 - 53559511
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  53559564 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53559511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 19916654 - 19916758
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||||||| |||||  |||| |||||| || |||||||||||| | |||||  ||||||| ||||||||||| ||| | |||| ||| || || ||||||    
T  19916654 atggtttagatatgtctttcgtccctgcaaatataggtcatttaaattttcgcccctgaagttactaatccttccaatctgccactgcaaatattaatca 19916753  T
Q  236 tttga 240  Q
    |||||    
T  19916754 tttga 19916758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 33294332 - 33294268
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||  ||||||||||| || |||||||||||||| ||||| |||| ||| |||||||||    
T  33294332 ttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtcccggaagttactaatc 33294268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 34238658 - 34238594
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | |||||||||||| || | |||||||||||| ||||| |||||||| |||||||||    
T  34238658 ttaaataggtttttcatccctgcaaatttaggtcatttgaattttcgtccctgaagttactaatc 34238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 54961445 - 54961533
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||  ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  54961445 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 54961533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 10128763 - 10128810
Alignment:
Q  195 acttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||| ||  ||||| |||||||||||||    
T  10128763 acttactaatcctcccattttgccactacaattattaatcatttgaaa 10128810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 13872072 - 13872171
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || ||||||| |||||| ||||| ||| |||| ||| ||||||| ||| | ||||| || || ||||||||||||||    
T  13872072 ttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcatttga 13872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 32846391 - 32846482
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||| ||||||| ||||| | |||||| ||| ||||||| ||||||||||  || || || |||||||||||||| | ||| ||||||||    
T  32846391 tataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcttaattaca 32846482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 33294524 - 33294425
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || ||||||  |||||| ||||| |||||||| ||||||||||| ||  | |||||||| || || |||||||||||    
T  33294524 ttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcatttga 33294425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 23870008 - 23870066
Alignment:
Q  66 gaggggcggccgccaaaggcatcacttttttaggg-caccaaaattattatttttactt 123  Q
    |||||||| | ||| | |||| ||||||||||||| |||||||||||||||||||||||    
T  23870008 gaggggcgacagcccagggcaccacttttttaggggcaccaaaattattatttttactt 23870066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 37678218 - 37678112
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||| | ||||| | ||||| |||||||| ||||||||||| ||| | |||| ||| || || |||||||||||||| | || ||    
T  37678218 tttcgtccctgcaaatataagccatttaaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatggttct 37678119  T
Q  252 aattaca 258  Q
    |||||||    
T  37678118 aattaca 37678112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 20086644 - 20086697
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||||    
T  20086644 tttcatccctgcaaatataggtcctttgaattttcgtccctgaagttactaatc 20086697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 33294147 - 33294244
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    ||||||||| ||||  ||| || || ||||||| |||||| ||||  ||| |||| ||||||||||| ||| |||||||||| || || |||||||||    
T  33294147 ttaaatatgttttttgtccatgcaaatataggttatttgaatttttgtccatgaagttactaatccttccaatttgcccctgcaaatattaatcattt 33294244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 37678055 - 37678108
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  37678055 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 37678108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 13872261 - 13872329
Alignment:
Q  137 tggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| |  ||||||||||| || |||| ||||||||| |||| |||| |||| |||||||||    
T  13872261 tggtttaaataggtctttcatccctgcaaatatatgtcatttgaatttttatccttgaagttactaatc 13872329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 47982022 - 47981918
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| |||||| || |||||   |||||| ||||| || ||||| ||||||||||| ||| | |||||||| || || ||||||    
T  47982022 atggcttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatca 47981923  T
Q  236 tttga 240  Q
    |||||    
T  47981922 tttga 47981918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 136 - 407
Target Start/End: Original strand, 73107 - 73378
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  73107 atggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatca 73206  T
Q  236 tttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatg 335  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||    
T  73207 tttgaaaatttgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcacttggtgaatgggattttgtcaggacacatcagcagatg 73306  T
Q  336 gcgagggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    ||||||||||||||  |||||||||||||||||||| ||| || || ||||||  |||||||||||||||||    
T  73307 gcgagggaaatgaccattttgcccttaatgagtctggtttagcacgaaatgaccgttttacccctgcctcca 73378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 143 - 406
Target Start/End: Original strand, 32619389 - 32619652
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 32619488  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||| |||||    
T  32619489 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 32619588  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  32619589 aaatgacaattttgcccttaatgagtctggtttcgcgcggaatgaccgttttacccctgcctcc 32619652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 143 - 406
Target Start/End: Complemental strand, 32622451 - 32622188
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaataatttgaaa 32622352  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||| |||||    
T  32622351 attcgtcataattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 32622252  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  32622251 aaatgacaattttgcccttaatgagtctggtttcgcgcggaatgaccgttttacccctgcctcc 32622188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 141 - 366
Target Start/End: Complemental strand, 51935296 - 51935071
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  51935296 ttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcatttga 51935197  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| ||| |||||| || |||||||  |||| ||||||||| ||||| || || |||    
T  51935196 aaattcgtcctaattaaaaaaaaatgctgaggtggagggtaattagatacatggcatatgatgaatggttttttatcaggacacgtcagccgaaggggag 51935097  T
Q  341 ggaaatgacatttttgcccttaatga 366  Q
    |  || |||||||||||| |||||||    
T  51935096 gacaacgacatttttgccattaatga 51935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 488 - 616
Target Start/End: Complemental strand, 34791262 - 34791134
Alignment:
Q  488 ttatacttcatagttttcttgttgaaaattatacttcataattttataattttcttgttgaaattctcaattaatttctttgaattttcttctctgaaaa 587  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34791262 ttatactttatagttttcttgttgaaaattatacttcataattttataattttctcgttgaaattctcaattaatttctttgaattttcttctctgaaaa 34791163  T
Q  588 tttggtttccactttaggaactcagtgcc 616  Q
    |||||||||||||||||||||||||||||    
T  34791162 tttggtttccactttaggaactcagtgcc 34791134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 46282069 - 46282183
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46282069 atggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 46282168  T
Q  236 tttgaaaattcgtcc 250  Q
    ||||||| |||||||    
T  46282169 tttgaaagttcgtcc 46282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 46282888 - 46282781
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  243 attcgtcc 250  Q
     |||||||    
T  46282788 gttcgtcc 46282781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 50063043 - 50062936
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  243 attcgtcc 250  Q
     |||||||    
T  50062943 gttcgtcc 50062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 49093044 - 49093153
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49093044 ttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatttga 49093143  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  49093144 aagttcgtcc 49093153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 143 - 296
Target Start/End: Original strand, 32238704 - 32238859
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||  ||||||  |||||||||||||||||||||||||||||||||||| |||||| |  ||| ||||| |||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaatgttaagcatttcaaa 32238803  T
Q  243 attcgtcctaatt--acaaaaatttgctgaggtggagggtaattaggtacgtggca 296  Q
    |||||||||||||  | |||||  |||||||||||| ||||||||| |||||||||    
T  32238804 attcgtcctaattaaaaaaaaaactgctgaggtggatggtaattagatacgtggca 32238859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 141 - 276
Target Start/End: Original strand, 2828196 - 2828331
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| |||||||| || |||||||| |||||||||||||||||| | |||||||||||||| | |||||||| ||| || || |||||||||||    
T  2828196 ttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatttga 2828295  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtgga 276  Q
    |  |||||| |||||| ||||||||||| |||||||    
T  2828296 attttcgtcttaattaaaaaaatttgcttaggtgga 2828331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 49093875 - 49093801
Alignment:
Q  176 tttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 49093801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 13295138 - 13295235
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||  | |||||||||    
T  13295138 ttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcattt 13295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 25066058 - 25065958
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||| |||||||||||| ||||||| |||||||||  | ||||||||    
T  25066058 ggtttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatt 25065959  T
Q  238 t 238  Q
    |    
T  25065958 t 25065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 6345732 - 6345618
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||| |||||||||||||| || || ||| ||||| |||    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  243 attcgtcctaattac 257  Q
     || |||||||||||    
T  6345632 tttagtcctaattac 6345618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 6344260 - 6344373
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| |||||||||||||||||  ||||||||||  |||||||| |||||||||||||||||||||||||||| || || || ||| |||||||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttgaaa 6344359  T
Q  243 attcgtcctaatta 256  Q
     || ||| ||||||    
T  6344360 tttggtcataatta 6344373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 25064936 - 25065033
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| || |||| |||  | |||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcattt 25065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 50062246 - 50062315
Alignment:
Q  181 tttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 250  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtcc 50062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 46545097 - 46544998
Alignment:
Q  156 atccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatt 255  Q
    |||||||||| ||||||||||||||  |||| |||||||| ||||||||||| |||||||||| ||| || || |||||||||||||| | |||||||||    
T  46545097 atccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaaaatagtcctaatt 46544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 13295677 - 13295608
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccc 210  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||    
T  13295677 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 1047585 - 1047486
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||||||||||||| |||||||||||||| ||||| || ||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  1047585 ttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 10019728 - 10019637
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||  || || || |||||||||||||| | ||| ||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcataattaca 10019637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 2829643 - 2829523
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgat-------ttttcatccctgaacttactaatcctcccattttgcccctgtaattactaat 233  Q
    |||||||||| ||||||||||  ||||||||||||||||||       ||||||||| ||| |||||||||||||||||||| |||||| || || ||||    
T  2829643 ttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaat 2829544  T
Q  234 catttgaaaattcgtcctaat 254  Q
    ||||||||  |||||| ||||    
T  2829543 catttgaattttcgtcataat 2829523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 2953845 - 2953728
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  2953845 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 2953746  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  2953745 tttttggtcctaattaca 2953728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 46850028 - 46849922
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||| ||||| ||| |||||||||| || || |||||||||||   || |||||    
T  46850028 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 46849929  T
Q  252 aattaca 258  Q
    |||||||    
T  46849928 aattaca 46849922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 2953462 - 2953566
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| ||||||||| |||||||||||||| ||||| ||||| || |||||||||||  || | |||||||| || || ||||||    
T  2953462 atggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatca 2953561  T
Q  236 tttga 240  Q
    |||||    
T  2953562 tttga 2953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 19755775 - 19755687
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||||||||||| |||| ||||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  19755775 tttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 19755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 49002878 - 49002978
Alignment:
Q  140 tttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttg 239  Q
    ||||||||||  |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||||||| || || ||||||||||    
T  49002878 tttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 49002977  T
Q  240 a 240  Q
    |    
T  49002978 a 49002978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 29980993 - 29980902
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| ||||| |||| ||| ||||||||||| ||| |||||||||| || || |||||||||||   || ||||||||||||    
T  29980993 tataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttgatttttggtcctaattaca 29980902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 35405285 - 35405356
Alignment:
Q  66 gaggggcggccgccaaaggcatcacttttttagggcaccaaaattattatttttacttcgtaatatatatat 137  Q
    |||||||||| ||| | |||| || |||||  |||||||||||||||||||||||||| |||||||||||||    
T  35405285 gaggggcggcagcccagggcaccattttttaggggcaccaaaattattatttttacttagtaatatatatat 35405356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 24701639 - 24701533
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    ||||||||||| || |||| | ||||||| ||||| |||||||| ||||||||||| ||||||||||  |  || || ||| |||||||||| | |||||    
T  24701639 tttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaaccatttgaaaaatggtcct 24701540  T
Q  252 aattaca 258  Q
    |||||||    
T  24701539 aattaca 24701533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 5183871 - 5183770
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| || |||||| ||||||| ||||| |||||||| |||| |||||| ||| |||||||||| || || |||||||||||   || ||||||||||    
T  5183871 tccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 5183772  T
Q  257 ca 258  Q
    ||    
T  5183771 ca 5183770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 5926524 - 5926621
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| ||  | |||||||||||    
T  5926524 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttga 5926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 29980636 - 29980741
Alignment:
Q  135 tatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatc 234  Q
    |||||||||||||||  |||| ||| ||||| |||||||||||||| |||||  || |||| ||||||||| | ||| | |||||||| || || |||||    
T  29980636 tatggtttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatc 29980735  T
Q  235 atttga 240  Q
    ||||||    
T  29980736 atttga 29980741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 28534875 - 28534820
Alignment:
Q  160 ctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttt 215  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  28534875 ctgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccatttt 28534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 33347786 - 33347680
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||| || || || |||||||||||   || |||||    
T  33347786 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct 33347687  T
Q  252 aattaca 258  Q
    |||||||    
T  33347686 aattaca 33347680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 48380695 - 48380801
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| ||| ||||| |||||||||||||| ||||| || ||||| ||||||||||| ||| | ||||  || ||  | |||||||||||||| | |||||    
T  48380695 tttcgtccttgtaaatataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatcatttgaaaaatggtcct 48380794  T
Q  252 aattaca 258  Q
    |||||||    
T  48380795 aattaca 48380801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 49003245 - 49003139
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||| ||| || || |||||||||||   || |||||    
T  49003245 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatttgatttttggtcct 49003146  T
Q  252 aattaca 258  Q
    |||||||    
T  49003145 aattaca 49003139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 52563656 - 52563770
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || ||||||  |||||   |||||||| |||  |||||||||||||||||||||| ||| || || |||||| ||||      
T  52563656 aaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatcacttgagt 52563755  T
Q  243 attcgtcctaattac 257  Q
     || |||||||||||    
T  52563756 tttggtcctaattac 52563770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 739222 - 739339
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||| | ||||| |||||| || |||||  ||||||| ||||| ||| |||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  739222 ttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 739321  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  739322 cttttggtcctaattaca 739339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 6056379 - 6056496
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||||| || ||||| ||||| ||| | || ||||| || || |||||||||||    
T  6056379 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatttga 6056478  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  6056479 cttttggtcctaattaca 6056496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 6056553 - 6056500
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  6056553 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6056500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 12577219 - 12577272
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  12577219 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12577272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 29042932 - 29042879
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||| || || |||||||||||||| |||||||||||||| |||||||||    
T  29042932 tttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 33030353 - 33030454
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| || |||||||||||||| ||||| |||||||| |||||||| || ||| | |||| ||| || ||  ||||||||||||| |  |||||||||    
T  33030353 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcatttgaaaaatgatcctaatta 33030452  T
Q  257 ca 258  Q
    ||    
T  33030453 ca 33030454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 37152567 - 37152640
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||| || || ||||||||||||||    
T  37152567 tataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttga 37152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 37152919 - 37152802
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||  ||||||| ||||| || ||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  37152919 ttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 37152820  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  37152819 cttttagtcctaattaca 37152802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 46364782 - 46364835
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  46364782 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 10976309 - 10976229
Alignment:
Q  41 tagggatggccctgagcatgggcgggaggggcggccgccaaaggcatcactttttta-gggcaccaaaattattattttta 120  Q
    ||||||||||||||||  |||||||| |||||||| | | |||||| || ||||||| ||||| ||||||||||| |||||    
T  10976309 tagggatggccctgagggtgggcgggcggggcggcagtccaaggcaccatttttttaggggcatcaaaattattagtttta 10976229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 46364577 - 46364641
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  46364577 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 5183509 - 5183608
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| | |||| || |||||||||||||| ||||| ||| | || ||||||||||| ||| | |||||||| || || |||||||||||    
T  5183509 ttaaatatgtctttcgttcctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcatttga 5183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 25414847 - 25414946
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||  || |||||| ||||||| ||||| || ||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  25414847 ttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 25414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 29043136 - 29043037
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| || ||| || |||||| ||||||| ||||| |||||||| |||||||||||  || | |||||||| || || |||||||||||    
T  29043136 ttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 29043037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 46849677 - 46849760
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||| |||| ||  || | ||||||||||| || || ||||||||    
T  46849677 tccctgtaaatataggtcatttgaattttcgtccctgaagttattaattctttcaatctgcccctgtaaatattagtcatttga 46849760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 5926891 - 5926785
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||  ||||||| |||||||||||||| ||||||||||  ||| | |||| ||| || || |||||||||||   || |||||    
T  5926891 tttcgtccctgcaaatatagaccatttgaattttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcatttgacttttggtcct 5926792  T
Q  252 aattaca 258  Q
    |||||||    
T  5926791 aattaca 5926785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 26953295 - 26953361
Alignment:
Q  139 gtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||| |  ||||||||||| || |||||||||||||| ||||| || ||||| |||||||||    
T  26953295 gtttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtctctgaagttactaatc 26953361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 33347623 - 33347673
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttacta 202  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| ||||||    
T  33347623 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttacta 33347673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 37152465 - 37152535
Alignment:
Q  170 aggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||| || || ||||||||||||||    
T  37152465 aggtcatttgaattttcgtccatgaagttactaatccttccaatatgcccttgcaaatactaatcatttga 37152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 1040301 - 1040418
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| || || |||| | ||||||| ||||  |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  1040301 ttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1040400  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  1040401 cttttggtcctaattaca 1040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 1040475 - 1040422
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  1040475 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 1047207 - 1047324
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| || || |||| | ||||||| ||||  |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  1047207 ttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1047306  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  1047307 cttttggtcctaattaca 1047324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 1047381 - 1047328
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  1047381 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 19755612 - 19755665
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  19755612 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 19755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 49003082 - 49003135
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||| | |||||||| |||||||||    
T  49003082 tttcatccctgcaaatataggtcatttgaatttccgtccctgaagttactaatc 49003135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 40933 - 40877
Alignment:
Q  68 ggggcggccgccaaaggcatcacttttttaggg-caccaaaattattatttttactt 123  Q
    |||||||||||| ||| || || ||| |||||| |||||||||||||||||||||||    
T  40933 ggggcggccgcccaagacaccattttattaggggcaccaaaattattatttttactt 40877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 6056760 - 6056660
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctg-aacttactaatcctcccattttgcccctgtaattactaatcatttg 239  Q
    |||||||||  |||| |||||| || |||| | ||||||| |||||||||||| || |||||||||||  || | |||||||| || || ||||||||||    
T  6056760 ttaaatatgtctttcgtccctgcaaatataagccatttgaattttcatccctgtaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 6056661  T
Q  240 a 240  Q
    |    
T  6056660 a 6056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 29980845 - 29980897
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaat 204  Q
    ||||||||||| || |||||||||||||| ||||| ||||| || ||||||||    
T  29980845 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaat 29980897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 143 - 406
Target Start/End: Complemental strand, 21978112 - 21977849
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttgaaa 21978013  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||| |||||    
T  21978012 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 21977913  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||  |||||| || ||||||  ||||||||||||||||    
T  21977912 aaatgacaattttgcccttaatgagtctagtttcgcacggaatgaccgttttacccctgcctcc 21977849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 143 - 406
Target Start/End: Original strand, 21972095 - 21972357
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatcc-tcagcttactaatcctcccattttgctcctgtaattactaatcatttgaaa 21972193  T
Q  243 attcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgaggg 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||| |||||    
T  21972194 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 21972293  T
Q  343 aaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcc 406  Q
    |||||||| |||||||||||||||||||| |||||| || ||||||  ||||||||||||||||    
T  21972294 aaatgacaattttgcccttaatgagtctggtttcgcacggaatgaccgttttacccctgcctcc 21972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 8654110 - 8654332
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  8654110 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatcatttga 8654209  T
Q  241 aaattcgtcctaatt-acaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcga 339  Q
    ||||||||||||||| | |||||  || ||||||||||||||||||| |||||||||| ||  ||||||  ||||| ||| |||| |||||||| || ||    
T  8654210 aaattcgtcctaattaaaaaaaaaatgttgaggtggagggtaattagatacgtggcatctgacgaatggttttttgccagaacacgtcagcagaagggga 8654309  T
Q  340 gggaaatgacatttttgccctta 362  Q
    ||| |||| ||||||| ||||||    
T  8654310 gggcaatggcatttttaccctta 8654332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 20072966 - 20072857
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20072966 ttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20072867  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  20072866 aagttcgtcc 20072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 141 - 276
Target Start/End: Complemental strand, 14744827 - 14744692
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  14744827 ttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 14744728  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtgga 276  Q
    |  ||||||||||||| ||||||||||| |||||||    
T  14744727 attttcgtcctaattaaaaaaatttgcttaggtgga 14744692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 39181060 - 39181169
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39181060 ttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181159  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  39181160 aagttcgtcc 39181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 39181893 - 39181784
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39181893 ttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181794  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  39181793 aagttcgtcc 39181784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 16532898 - 16533005
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  243 attcgtcc 250  Q
     |||||||    
T  16532998 gttcgtcc 16533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 20072124 - 20072233
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20072124 ttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttga 20072223  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  20072224 aagttcgtcc 20072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 36476770 - 36476877
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  243 attcgtcc 250  Q
     |||||||    
T  36476870 gttcgtcc 36476877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 36477471 - 36477364
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  243 attcgtcc 250  Q
     |||||||    
T  36477371 gttcgtcc 36477364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 16533727 - 16533613
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  16533727 atggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatca 16533628  T
Q  236 tttgaaaattcgtcc 250  Q
    ||||||| |||||||    
T  16533627 tttgaaagttcgtcc 16533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 22870573 - 22870451
Alignment:
Q  128 atatatatat-ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaat 226  Q
    |||||||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  22870573 atatatatataggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaa 22870474  T
Q  227 tactaatcatttgaaaattcgtc 249  Q
     | ||||||||| ||| ||||||    
T  22870473 aattaatcatttaaaatttcgtc 22870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 20856935 - 20857044
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||    
T  20856935 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857034  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  20857035 aatttcgtcc 20857044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 20857644 - 20857535
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||| ||| | ||||||||||||||||||||||||||||||    |||||||||||    
T  20857644 ttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857545  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  20857544 aatttcgtcc 20857535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 22869612 - 22869717
Alignment:
Q  145 atatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaat 244  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||| ||||| ||| |    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  245 tcgtcc 250  Q
    ||||||    
T  22869712 tcgtcc 22869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 31107934 - 31108015
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctg 222  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31107934 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttacccctg 31108015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 8673853 - 8673739
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaa 242  Q
    |||||||| ||||||||||| || |||||| |||||||  |||||||| ||||||| ||||| |||||||||||||| || ||||  |||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatttgaaa 8673754  T
Q  243 attcgtcctaattac 257  Q
     ||| ||||||||||    
T  8673753 tttcatcctaattac 8673739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 21979068 - 21978955
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| ||||||| | |||||||||||||||||  ||||||||||||||||| |||||  ||||||||  | |||| |||||     
T  21979068 ttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataatttgg 21978969  T
Q  241 aaattcgtcctaat 254  Q
    || || ||||||||    
T  21978968 aatttagtcctaat 21978955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 25253089 - 25253206
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  ||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||| ||| |||||||||| || || |||||||||||    
T  25253089 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 25253188  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  25253189 cttttggtcctaattaca 25253206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 25316879 - 25316996
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  ||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||| ||| |||||||||| || || |||||||||||    
T  25316879 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 25316978  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  25316979 cttttggtcctaattaca 25316996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 39402210 - 39402146
Alignment:
Q  176 tttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || || |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttga 39402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 32052227 - 32052326
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| |  ||||||| || || |||||||||||    
T  32052227 ttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga 32052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 14745462 - 14745568
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| |||||||||||||| ||||||||||| ||| | |||||||| || || |||||||||||   || |||||    
T  14745462 tttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 14745561  T
Q  252 aattaca 258  Q
    |||||||    
T  14745562 aattaca 14745568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 37945008 - 37945114
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||| || || |||||||||||   || |||||    
T  37945008 tttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 37945107  T
Q  252 aattaca 258  Q
    |||||||    
T  37945108 aattaca 37945114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 32052605 - 32052488
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  32052605 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 32052506  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  32052505 cttttggtcctaattaca 32052488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 31108437 - 31108338
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||||  ||||||||||| || |||||  ||||||||||||||||| |||||||||||||| | |||||||  |||||||| || ||||||||    
T  31108437 ggtttaaatatgtatttcatccctgcaaatataga-catttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcatt 31108339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 21260879 - 21260970
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaa 243  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||  || || || ||||||||||||||    
T  21260879 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaa 21260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 25253467 - 25253368
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| || || ||||||||||||||    
T  25253467 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga 25253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 25317258 - 25317159
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| || || ||||||||||||||    
T  25317258 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga 25317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 8323055 - 8323161
Alignment:
Q  137 tggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcat 236  Q
    ||||||||||| |  |||||||||| ||| |||||||||||||| ||||| ||| |||| ||||||||||| ||||||||||  || |  || |||||||    
T  8323055 tggtttaaataggtctttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcat 8323154  T
Q  237 ttgaaaa 243  Q
    |||||||    
T  8323155 ttgaaaa 8323161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 33735683 - 33735577
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||   || |||||    
T  33735683 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 33735584  T
Q  252 aattaca 258  Q
    |||||||    
T  33735583 aattaca 33735577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 22533774 - 22533654
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||   ||||| |||||| || |||||||||||||| ||||| |||| ||| ||||||||||| | || |||||  || || || ||||||||    
T  22533774 ggtttaaatagctttttcgtccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatt 22533675  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||||| | ||||||||||||    
T  22533674 tgaaaaatggtcctaattaca 22533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 22024225 - 22024134
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| ||||| || || || ||||||||||| ||| |||||| ||| || || |||||||||||||| | ||||||||||||    
T  22024225 tataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcatttgaaaaatggtcctaattaca 22024134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 18934716 - 18934834
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  ||||||||||| || |||| ||||||||| ||||| ||| |||| |||||||||||  |||||||||  || || || || ||||||||    
T  18934716 ttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcatttga 18934815  T
Q  241 aaattcgtcctaattacaa 259  Q
    ||| | ||| |||||||||    
T  18934816 aaaatggtcataattacaa 18934834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 7015864 - 7015773
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||| ||| ||||| ||||| |||||||| ||||||||||| ||| | |||| ||| || || |||||||||||||| | ||||||||||||    
T  7015864 tataagtcgtttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatagtcctaattaca 7015773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 33735316 - 33735415
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||  || |||||| ||||||||||||| |||||||| ||||||||||| ||| | || ||||| || || |||||||||||    
T  33735316 ttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcatttga 33735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 16117980 - 16118030
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    ||||||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  16117980 tccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcct 16118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 6421829 - 6421882
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  6421829 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 18013789 - 18013736
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  18013789 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 18013736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 18934890 - 18934837
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| ||||||||| |||||||||||||| |||||||||| ||| |||||||||    
T  18934890 tttcgtccctgtaaatataggtcatttgaattttcatcccggaagttactaatc 18934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 18935097 - 18935029
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||| | ||||  ||||||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  18935097 ggtttaaataggttttttgtccctgtaaatataggtcatttga-ttttcgtccctgaaattactaatcct 18935029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 33735520 - 33735573
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  33735520 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 33735573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 41339714 - 41339617
Alignment:
Q  161 tgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||| |||||||||||||| ||||| ||| | || ||||||||| | ||||||||||   | || || |||||||||||||| | ||||||||||||    
T  41339714 tgtaaatataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaaaaatggtcctaattaca 41339617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 12991174 - 12991070
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| |||||| || |||| ||||||||| ||||| || ||||| ||||||||||| ||| | | |||||| || || ||||||    
T  12991174 atggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatca 12991075  T
Q  236 tttga 240  Q
    |||||    
T  12991074 tttga 12991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 13064795 - 13064691
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| |||||| || |||| ||||||||| ||||| || || || ||||||||||| ||| | |||||||| || || ||||||    
T  13064795 atggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatca 13064696  T
Q  236 tttga 240  Q
    |||||    
T  13064695 tttga 13064691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 21978167 - 21978211
Alignment:
Q  214 ttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||||||||||  | |||||||||||||||||||||||||||||    
T  21978167 ttgcccctgtaaaaattaatcatttgaaaattcgtcctaattaca 21978211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 32052420 - 32052484
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | |||||||||||| || ||||| |||||||| ||||| |||||||| |||||||||    
T  32052420 ttaaataggtttttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatc 32052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 39402779 - 39402736
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttt 184  Q
    ||||||||| ||||||||| || |||||||||||||||||||||    
T  39402779 ttaaatatgtttttcatccatgcaattataggtcatttgatttt 39402736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 6421986 - 6421904
Alignment:
Q  158 ccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||| || |||| ||||||||| ||||| |||||||| |||||||||||  || | |||||||| || || |||||||||||    
T  6421986 ccctgcaaatataagtcatttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttga 6421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 12990965 - 12990912
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  12990965 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 13064586 - 13064533
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  13064586 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 13064533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 18013641 - 18013714
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||| ||||| ||  |||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  18013641 tataggtcatttgaattttcgtcagtgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 18013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 25253263 - 25253210
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  25253263 tttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 25253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 7015522 - 7015610
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||| ||||||| ||||||||| |||| ||||||||| | ||| | |||| ||| || || |||||||||||    
T  7015522 tttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 7015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 27753675 - 27753739
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||||| || |||||||||    
T  27753675 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 27753739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 4e-89; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 141 - 407
Target Start/End: Original strand, 20101773 - 20102038
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  20101773 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatcatttga 20101872  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||| ||||| ||||||||||||| | ||||||| |||||||||| ||| ||||||  |||||||||||||| ||||||||||||  |    
T  20101873 aaattcgtcctaatta-aaaaaattgctgaggtggatgctaattagatacgtggcatctggcgaatggttttttgtcaggacacgtcagcagatggcatg 20101971  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactattttacccctgcctcca 407  Q
    |||||||||||||||||||||||| | ||||   | |||| ||||||| ||||||||||||||||||    
T  20101972 ggaaatgacatttttgcccttaataaatctggacttgcgcacaatgaccattttacccctgcctcca 20102038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 141 - 276
Target Start/End: Complemental strand, 20103241 - 20103107
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  20103241 ttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatttga 20103142  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtgga 276  Q
    |||||||||||||||| ||||| |||||||||||||    
T  20103141 aaattcgtcctaatta-aaaaaattgctgaggtgga 20103107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 29957820 - 29957929
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29957820 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 29957919  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  29957920 aagttcgtcc 29957929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 20982527 - 20982628
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20982527 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20982626  T
Q  241 aa 242  Q
    ||    
T  20982627 aa 20982628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 20983358 - 20983249
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20983358 ttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20983259  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  20983258 aagttcgtcc 20983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 29958644 - 29958536
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  29958644 ttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcatttga 29958545  T
Q  241 aaattcgtc 249  Q
    || ||||||    
T  29958544 aagttcgtc 29958536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 24387354 - 24387471
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| || |||||  | |||||||||||    
T  24387354 ttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatttga 24387453  T
Q  241 aaattcgtcctaattaca 258  Q
    ||||||||||||||||||    
T  24387454 aaattcgtcctaattaca 24387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 25624530 - 25624421
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  | ||||||||| |    
T  25624530 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcatttaa 25624431  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  25624430 aatttcgtcc 25624421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 25623286 - 25623400
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||    
T  25623286 atggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 25623385  T
Q  236 tttgaaaattcgtcc 250  Q
    ||| ||| |||||||    
T  25623386 tttaaaatttcgtcc 25623400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 354
Target Start/End: Complemental strand, 23206479 - 23206292
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttg 266  Q
    |||||| |||||||  |||||||| |||| |||||||||||| ||||||||| ||| || || ||| |||| |||||||||||||||||| |||||||||    
T  23206479 tatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtcctaattaaaaaaatttg 23206380  T
Q  267 ctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgagggaaatgacatttt 354  Q
    || | ||||| ||||||||| || |||||   |||||| |||  |||||||||||||| | |||||| ||| |  | |||||||||||    
T  23206379 cttacgtggatggtaattagatatgtggcgactggtgactgggtttttgtcaggacacgtaagcagaaggcaattgcaatgacatttt 23206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 354
Target Start/End: Complemental strand, 23678083 - 23677896
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttg 266  Q
    |||||| |||||||  |||||||| |||| |||||||||||| ||||||||| ||| || || ||| |||| |||||||||||||||||| |||||||||    
T  23678083 tatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtcctaattaaaaaaatttg 23677984  T
Q  267 ctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgagggaaatgacatttt 354  Q
    || | ||||| ||||||||| || |||||   |||||| |||  |||||||||||||| | |||||| ||| |  | |||||||||||    
T  23677983 cttacgtggatggtaattagatatgtggcgactggtgactgggtttttgtcaggacacgtaagcagaaggcaattgcaatgacatttt 23677896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 19620886 - 19620777
Alignment:
Q  145 atatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaat 244  Q
    |||||| |||| |||||  || ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||  |    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattt 19620787  T
Q  245 tcgtcctaat 254  Q
    || |||||||    
T  19620786 tcatcctaat 19620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 21103089 - 21103193
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||     |||||||| | |||| |||||||||||||||||||||||||||  |||||| || ||||||||||||||| || ||    
T  21103089 ttaaatatgcttttcatcc-----attataggccgtttggtttttcatccctgaacttactaatcctttcattttaccactgtaattactaatccttcga 21103183  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  21103184 aagttcgtcc 21103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 24388353 - 24388276
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcc 218  Q
    |||||||||| ||||||||||| ||||||| |  |||||||||||||||||||| |||||||||||| ||||||||||    
T  24388353 ttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgcc 24388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 16366966 - 16367065
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  16366966 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 16367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 366
Target Start/End: Original strand, 23183635 - 23183826
Alignment:
Q  174 catttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggt 273  Q
    |||||||  ||||||||  ||| ||||||||||||| |||||||| ||| || || ||| ||||| ||||||||||||||||| ||   |||||||||||    
T  23183635 catttgaaatttcatccaagaagttactaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaatta-aattttttgctgaggt 23183733  T
Q  274 ggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgagggaaatgacatttttgcccttaatga 366  Q
    ||| ||||| ||| ||||||||   |||||| |||  |||| ||||||||| | |||| | ||  |  | ||||| |||||||||||||||||    
T  23183734 ggatggtaagtagttacgtggcggctggtgattgggtttttttcaggacacgtaagcaaaaggaaattgcaatgatatttttgcccttaatga 23183826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 366
Target Start/End: Original strand, 23594892 - 23595083
Alignment:
Q  174 catttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggt 273  Q
    |||||||  ||||||||  ||| ||||||||||||| |||||||| ||| || || ||| ||||| ||||||||||||||||| ||   |||||||||||    
T  23594892 catttgaaatttcatccaagaagttactaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaatta-aattttttgctgaggt 23594990  T
Q  274 ggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgagggaaatgacatttttgcccttaatga 366  Q
    ||| ||||| ||| ||||||||   |||||| |||  |||| ||||||||| | |||| | ||  |  | ||||| |||||||||||||||||    
T  23594991 ggatggtaagtagttacgtggcggctggtgattgggtttttttcaggacacgtaagcaaaaggaaattgcaatgatatttttgcccttaatga 23595083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 9694097 - 9694006
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |  || || || |||||||||||||| | ||||||||||||    
T  9694097 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaaaatggtcctaattaca 9694006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 20911144 - 20911232
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  20911144 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20911232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 28599427 - 28599547
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| |  |||| ||| || || ||||| |||||||| ||||| ||| |||| ||||||||||| ||||||||||  || || || ||||||||    
T  28599427 ggtttaaataggtctttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatt 28599526  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||||| | ||||||||||||    
T  28599527 tgaaaaatggtcctaattaca 28599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 43236509 - 43236577
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccca 211  Q
    |||||||| ||| ||||||| || |||||| |||||||  |||||||||||||||||||||||||||||    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 32519158 - 32519257
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||| |||| || || |||||||||||    
T  32519158 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttga 32519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 1149951 - 1150057
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| |  ||||||| || || |||||||||||   || |||||    
T  1149951 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatttgacttttggtcct 1150050  T
Q  252 aattaca 258  Q
    |||||||    
T  1150051 aattaca 1150057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 10446830 - 10446932
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || ||||||    
T  10446830 atggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 10446929  T
Q  236 ttt 238  Q
    |||    
T  10446930 ttt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 16367333 - 16367227
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||   || |||||    
T  16367333 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcct 16367234  T
Q  252 aattaca 258  Q
    |||||||    
T  16367233 aattaca 16367227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 17366640 - 17366746
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||||||| || || |||||||||||||| ||||| |||||||| ||| ||||||| ||| | |||| ||| || || ||||||||| |||| | |||||    
T  17366640 tttcatccatgcaaatataggtcatttgaattttcttccctgaatttaataatccttccaatctgccactgcaaatattaatcatttaaaaaatggtcct 17366739  T
Q  252 aattaca 258  Q
    |||||||    
T  17366740 aattaca 17366746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 33881575 - 33881672
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||| |||||||||||||| |||||| |||||||  |||||||||| |  ||| |||| ||||||||||||| ||| || || ||||||    
T  33881575 ggttaaaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatca 33881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 19606918 - 19606986
Alignment:
Q  139 gtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||||  |||| ||||||||| |||| ||||||||| ||||| |||||||| |||||||||||    
T  19606918 gtttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatcct 19606986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 1150318 - 1150219
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| | |||| || |||||||||||||| ||||| |||||||| |||||||||||  || | |||||||| || || |||||||||||    
T  1150318 ttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatttga 1150219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 7981066 - 7981120
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccca 211  Q
    |||||| || ||||||||||||||  ||||||||| |||||||||||||||||||    
T  7981066 tccctgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 22309801 - 22309695
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||  | ||| | || | ||| || || |||||||||||||| | |||||    
T  22309801 tttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaattgttccaatctgacactgcaaatattaatcatttgaaaaatggtcct 22309702  T
Q  252 aattaca 258  Q
    |||||||    
T  22309701 aattaca 22309695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 18476907 - 18476976
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||| || |||| |||||| || |||||||||||||| ||||  |||||||| |||||||||||    
T  18476907 ggtttaaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatcct 18476976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 20911515 - 20911446
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| |||||||||  |||| ||||||||| |||||||||||||| ||||  |||||||| |||||||||    
T  20911515 atggcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatc 20911446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 32519332 - 32519279
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  32519332 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 32519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 7983905 - 7983837
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccca 211  Q
    |||||||| ||||||| | | || ||||||||||||||  |||||||  ||||||||||||||||||||    
T  7983905 aaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 13646130 - 13646198
Alignment:
Q  188 tccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| ||||||||||||||||| |||||||||| || || |||||| || ||| || ||||||||||    
T  13646130 tccctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 13646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 13652143 - 13652075
Alignment:
Q  188 tccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||| ||||||||||||||||| |||||||||| || || |||||| || ||| || ||||||||||    
T  13652143 tccctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 13652075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 43237815 - 43237747
Alignment:
Q  143 aaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctccca 211  Q
    |||||||| |||  |||||| || |||||| |||||||  ||| |||||||||||||||||||||||||    
T  43237815 aaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 5608949 - 5608858
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||| |||||||| ||||| || || || |||||||||||  |||||||||  || || || |||||||||||||| | ||||||||||||    
T  5608949 tatagatcatttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatttgaaaaatggtcctaattaca 5608858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 32519536 - 32519437
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||| ||||||||| ||||| | |||||| |||||||||||  || | |||||||| || || |||||||||||    
T  32519536 ttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 32519437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 37985097 - 37985031
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcc 218  Q
    |||| |||||| || |||| ||||||||||||||| || ||||| ||||||||||| ||| ||||||    
T  37985097 tttcgtccctgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgcc 37985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 45663894 - 45663772
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| ||||||||| |||||   |||||| ||||| |||||||| ||||||||||| | | | || ||||| || || ||||||    
T  45663894 atggcttaaatatgtctttcgtccctgtaaatatagtcaatttgaattttcgtccctgaagttactaatccttcaaatctggccctgcaaatattaatca 45663795  T
Q  236 tttgaaaattcgtcctaattaca 258  Q
    |||||   || ||||||||||||    
T  45663794 tttgacttttggtcctaattaca 45663772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 1150114 - 1150061
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  1150114 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1150061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 4375572 - 4375669
Alignment:
Q  161 tgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    ||||| ||||||||| || | |||||||| ||||| ||| ||||||| ||||||||||   | || || |||||||||||||| | || |||||||||    
T  4375572 tgtaaatataggtcaattaaattttcatctctgaaattattaatccttccattttgccatagcaaatattaatcatttgaaaaatggttctaattaca 4375669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 16367170 - 16367223
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  16367170 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 16367223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 20911303 - 20911254
Alignment:
Q  156 atccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  20911303 atccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 20911254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 22731739 - 22731792
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| ||||| || |||||||||    
T  22731739 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 22731792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 41846599 - 41846652
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| |||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  41846599 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 41846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 8089452 - 8089572
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| | ||||| || ||| || |||| ||||||||| ||||| ||  |||| ||||||||||| ||| | |||||||| || ||  |||||||    
T  8089452 ggtttaaataggtttttcgtctctgcaaatatatgtcatttgaattttcgtctttgaagttactaatccttccaatctgcccctgcaaatatcaatcatt 8089551  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    |||   || ||||||||||||    
T  8089552 tgacttttggtcctaattaca 8089572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 9693938 - 9694002
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| ||||| || |||||||||    
T  9693938 ttaaataggattttcgtccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 9694002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 17284746 - 17284818
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatt 213  Q
    ||||||| | ||||| |||||| || |||||||||||||| ||||| |  ||||| ||||||||||| |||||    
T  17284746 ttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtatctgaagttactaatccttccatt 17284818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 18477260 - 18477140
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    ||||||||||||  |||| |||||| || |||| | ||||| | ||||| ||| |||| ||||||||| | ||||||||||  || |  || ||||||||    
T  18477260 ggtttaaatatgtatttcgtccctgcaaatataagccatttaaattttcgtccatgaagttactaatcattccattttgccattgaagatattaatcatt 18477161  T
Q  238 tgaaaattcgtcctaattaca 258  Q
    | |||| | ||||||||||||    
T  18477160 tcaaaaatggtcctaattaca 18477140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 19619584 - 19619628
Alignment:
Q  196 cttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||||||||||| || || |||| ||||||    
T  19619584 cttactaatcctcccattttgcccctgcaaatattaattatttga 19619628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 141 - 407
Target Start/End: Original strand, 13137 - 13404
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||| ||||  ||| |||||||||||||||||||||| |||||||||||||||||    
T  13137 ttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatcatttga 13236  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||| ||||||  |||| ||||||||| |||||||| || |||    
T  13237 aaattcgtcctaattaaaaaaaattgctgaggtggagggtaattagatacgtggcatctggcgaatggttttttttcaggacacgtcagcagaaggggag 13336  T
Q  341 ggaaatgacatttttgcccttaatgagtctgatttcgcgcgcaatgactatttta-cccctgcctcca 407  Q
    || ||||||||||||||||||||||| ||||   ||  |||||||||| |||||| ||||||||||||    
T  13337 ggcaatgacatttttgcccttaatgaatctggactcatgcgcaatgaccattttaccccctgcctcca 13404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 141 - 333
Target Start/End: Complemental strand, 14474 - 14283
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  14474 ttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattactaatcatttga 14375  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcaga 333  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||| || ||||||| ||  ||||||  |||||||||||||| ||||||||    
T  14374 aaattcatcctaatta-aaaaaaatgctgaggtggagggtaattagatatgtggcatctgacgaatggttttttgtcaggacacgtcagcaga 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 141 - 363
Target Start/End: Complemental strand, 17784482 - 17784260
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||||| |    
T  17784482 ttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatttta 17784383  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattaggtacgtggcatttggtgaatggagttttgtcaggacacatcagcagatggcgag 340  Q
    |||||||||||||||| ||||| || |||||||||| ||||||||| || ||||||  | | || |||  |||||||||||||| |||||||||||| |     
T  17784382 aaattcgtcctaattaaaaaaaattactgaggtggatggtaattagatatgtggcaactagcgactggctttttgtcaggacacgtcagcagatggcaat 17784283  T
Q  341 ggaaatgacatttttgcccttaa 363  Q
     | ||||||||||||||||||||    
T  17784282 tgcaatgacatttttgcccttaa 17784260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 33399969 - 33400078
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33399969 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 33400068  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  33400069 aagttcgtcc 33400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 1661533 - 1661418
Alignment:
Q  135 tatggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatc 234  Q
    |||| |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  1661533 tatgatttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatc 1661434  T
Q  235 atttgaaaattcgtcc 250  Q
    |||||||| |||||||    
T  1661433 atttgaaagttcgtcc 1661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14657306 - 14657197
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  14657306 ttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatttga 14657207  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  14657206 aagttcgtcc 14657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 4116802 - 4116911
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||    
T  4116802 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 4116901  T
Q  241 aaattcgtcc 250  Q
    ||||||||||    
T  4116902 aaattcgtcc 4116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 4117644 - 4117535
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||    
T  4117644 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 4117545  T
Q  241 aaattcgtcc 250  Q
    ||||||||||    
T  4117544 aaattcgtcc 4117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 33401223 - 33401116
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||    
T  33401223 ttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatttga 33401124  T
Q  241 aaattcgt 248  Q
    | ||||||    
T  33401123 atattcgt 33401116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 8427459 - 8427381
Alignment:
Q  144 aatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctg 222  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctg 8427381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 14656483 - 14656592
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||||||||||||||| |||||||||   ||||||||||||||||||| |||||||||||||| |||||||||||||||    |||||||||||    
T  14656483 ttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 14656582  T
Q  241 aaattcgtcc 250  Q
    || |||||||    
T  14656583 aagttcgtcc 14656592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 5064338 - 5064437
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||| |||||||||| || || |||||||||||    
T  5064338 ttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatttga 5064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 8427203 - 8427316
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||||||| || || |||||||||||||| ||||| || || || |||||||||||||||||||||||||| || || |||||| ||||    
T  8427203 ttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcagttga 8427302  T
Q  241 aaattcgtcctaat 254  Q
    |  ||| |||||||    
T  8427303 attttcatcctaat 8427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 13480211 - 13480328
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  13480211 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 13480310  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  13480311 cttttggtcctaattaca 13480328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 23291747 - 23291864
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||  || |||||| ||||||| |||||||||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  23291747 ttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 23291846  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  23291847 cttttggtcctaattaca 23291864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 13480589 - 13480490
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||  || || |||||||||||    
T  13480589 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatttga 13480490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 15819871 - 15819772
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| | | ||| || || ||||||||||||||    
T  15819871 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatttga 15819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 30234973 - 30234874
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||  ||||| |||||||||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  30234973 ttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 30234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 738078 - 737961
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||||||  || || |||||||||||    
T  738078 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcatttga 737979  T
Q  241 aaattcgtcctaattaca 258  Q
       || ||||||||||||    
T  737978 cttttggtcctaattaca 737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 3299940 - 3299823
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||  || || || |||||||||||    
T  3299940 ttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcatttga 3299841  T
Q  241 aaattcgtcctaattaca 258  Q
    ||| | || |||||||||    
T  3299840 aaaatggttctaattaca 3299823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 5064720 - 5064599
Alignment:
Q  137 tggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcat 236  Q
    |||||||||||||  |||| || ||| || |||||| ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| || || |||||||    
T  5064720 tggtttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcat 5064621  T
Q  237 ttgaaaattcgtcctaattaca 258  Q
    ||||   || ||||||||||||    
T  5064620 ttgacttttggtcctaattaca 5064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 32337922 - 32337833
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    |||||||||||||| ||||| |||||||| ||||| ||||| ||| | |||||||| || || |||||||||||   |||||||||||||    
T  32337922 tataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatttgacttttcgtcctaatta 32337833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 13229262 - 13229326
Alignment:
Q  60 gggcgggaggggcggccgccaaaggcatcacttttttag-ggcaccaaaattattatttttactt 123  Q
    |||| ||||||||||| ||| |||||| || |||||||| |||||||||||||||||||||||||    
T  13229262 gggcaggaggggcggcagcccaaggcaccatttttttagaggcaccaaaattattatttttactt 13229326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 20995041 - 20994973
Alignment:
Q  172 gtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    ||||||||| |||||||||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  20995041 gtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 13480396 - 13480333
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaat 204  Q
    ||||||| | |||||||||||| || |||||||||||||| ||||| |||||||| ||||||||    
T  13480396 ttaaataggtttttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaat 13480333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 31879456 - 31879577
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||||||||||| |  |||| |||||| || ||| |||||||||| ||||| |||| ||| ||||||||| | ||||||||||  || || || |||| |    
T  31879456 atggtttaaataggtctttcgtccctgcaaatat-ggtcatttgaattttcgtccccgaagttactaatctttccattttgccattgcaaatattaataa 31879554  T
Q  236 tttgaaaattcgtcctaattaca 258  Q
    |||||||| | ||||||||||||    
T  31879555 tttgaaaaatggtcctaattaca 31879577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 32337564 - 32337666
Alignment:
Q  138 ggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatt 237  Q
    |||||||||| |  |||| |||||| || |||||  ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || ||||||||    
T  32337564 ggtttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatt 32337663  T
Q  238 tga 240  Q
    |||    
T  32337664 tga 32337666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 23291921 - 23291868
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  23291921 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 23291868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 9607686 - 9607598
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| | | | |||||||| || || |||||||||||    
T  9607686 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttctaatatgcccctgcaaatattaatcatttga 9607598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 20561123 - 20561187
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||  ||||||||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  20561123 ttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 20561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 21880362 - 21880466
Alignment:
Q  136 atggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatca 235  Q
    |||| |||||||||  |||| | ||||||| |||| ||||||||| ||||| || ||||| |||||||||||  || | |||||||| || || ||||||    
T  21880362 atggcttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatca 21880461  T
Q  236 tttga 240  Q
    |||||    
T  21880462 tttga 21880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 1066500 - 1066405
Alignment:
Q  161 tgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 256  Q
    ||||| ||||| |||||||| ||||| |||||||| ||||||||  | ||||||||||  || || || |||||||||||||| | ||| ||||||    
T  1066500 tgtaaatatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaaaaatagtcataatta 1066405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 22494245 - 22494162
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||| || |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||||||| || ||  ||||||||||    
T  22494245 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttga 22494162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 23292125 - 23292026
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||| || || |||||||||||||| ||||| |||||||| ||||||||||| ||| | |  ||||| || || |||||||||||    
T  23292125 ttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcatttga 23292026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 7612562 - 7612668
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || |||||  ||||||| ||||| |||||||| |||||||| ||  ||||||| |  || || || |||||||||||||| | |||||    
T  7612562 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaattctttcattttgtcattgcaaatattaatcatttgaaaaatggtcct 7612661  T
Q  252 aattaca 258  Q
    |||||||    
T  7612662 aattaca 7612668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 20994822 - 20994888
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcct 207  Q
    |||||||||  |||| ||||||||| ||||| |||||||| ||||| || ||||| |||||||||||    
T  20994822 ttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatcct 20994888  T

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Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 31386813 - 31386919
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||||||||||||| ||||||  |||||| | ||| ||| |||| || |||||||| |||||||||   || || || |||||||||||||| |  ||||    
T  31386813 tttcatccctgtaaatataggatatttgaatattcgtccttgaagttgctaatccttccattttgcaattgcaaatattaatcatttgaaaaatgatcct 31386912  T
Q  252 aattaca 258  Q
    |||||||    
T  31386913 aattaca 31386919  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 737904 - 737957
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||| |||||| || |||||||||||||| ||||||| |||||| |||||||||    
T  737904 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatc 737957  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 10669053 - 10668988
Alignment:
Q  59 tgggcgggaggggcggccgccaaaggcatcacttttttaggg-caccaaaattattatttttactt 123  Q
    |||||||||||||| || | | | |||| || |||||||||| |||||||||||||||||||||||    
T  10669053 tgggcgggaggggcagcagtccagggcaccatttttttaggggcaccaaaattattatttttactt 10668988  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21880571 - 21880624
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  21880571 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 21880624  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 22494057 - 22494004
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || ||||||| |||||| ||||| |||||||| |||||||||    
T  22494057 tttcatccctgcaaatataggttatttgaattttcgtccctgaagttactaatc 22494004  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 32337741 - 32337688
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| || ||||| |||||||||    
T  32337741 tttcatccctgcaaatataggtcatttgaattttcgtctctgaagttactaatc 32337688  T

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Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 5064542 - 5064594
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaat 204  Q
    ||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||    
T  5064542 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaat 5064594  T

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Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 19296439 - 19296487
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||| || |||||||||||||| ||||||||| |||| |||||||||    
T  19296439 tccctgcaaatataggtcatttgaattttcatccatgaagttactaatc 19296487  T

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Target: scaffold0009 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 141 - 276
Target Start/End: Original strand, 261004 - 261139
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| || || |||||||||||    
T  261004 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatttga 261103  T
Q  241 aaattcgtcctaattacaaaaatttgctgaggtgga 276  Q
    |  |||| |||||||| ||||||||||| |||||||    
T  261104 attttcgacctaattaaaaaaatttgcttaggtgga 261139  T

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Target: scaffold0009; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 262538 - 262441
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || |||||||||    
T  262538 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcattt 262441  T

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Target: scaffold1493 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 596 - 695
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  596 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 695  T

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Target: scaffold1493; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 974 - 875
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||||||||  |||| ||||||||| ||| || ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| || || |||||||||||    
T  974 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 800 - 853
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  800 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 13612 - 13709
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||| |||  | |||||||||    
T  13612 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcattt 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 14690 - 14593
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    |||||||||| |||||| |||  ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||  | |||||||||    
T  14690 ttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattt 14593  T

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Target: scaffold0233 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 8462 - 8553
Alignment:
Q  167 tataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||| ||| || || |||||||||||||| | ||||||||||||    
T  8462 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatggtcctaattaca 8553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 8802 - 8714
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| ||||||||| |||||||||||||| ||| |||||  ||| ||| ||||||| ||| |||| | ||| || || |||||||||||    
T  8802 tttcgtccctgtaaatataggtcatttgaatttccatccgcgaagttattaatccttccaatttgtcactgcaaatattaatcatttga 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 10339 - 10445
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| |||||| || ||||| |||||||| ||||| |||||||| ||||||||||| ||| |||||||||| || || |||||||||||   || |||||    
T  10339 tttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 10438  T
Q  252 aattaca 258  Q
    |||||||    
T  10439 aattaca 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 11227 - 11121
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 251  Q
    |||| ||||||||| |||||||||||||| ||||| ||| |||| ||| |||| || ||||||||||  || || || |||||||||||||| | ||| |    
T  11227 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaaaatggtctt 11128  T
Q  252 aattaca 258  Q
    |||||||    
T  11127 aattaca 11121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 10867 - 10955
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttga 240  Q
    |||| |||||| || |||||||||||||| ||||| |||  ||| ||||||||||| ||||||||||  || || || |||||||||||    
T  10867 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttga 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 14234 - 14355
Alignment:
Q  137 tggtttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcat 236  Q
    ||||||||||| |  |||| |||||| || |||| ||||||||| ||||| ||| |||  ||||||||||| ||| |||||| ||| || || |||| ||    
T  14234 tggtttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaatttgccactgcaaatattaataat 14333  T
Q  237 ttgaaaattcgtcctaattaca 258  Q
    ||||||| ||||||| ||||||    
T  14334 ttgaaaaatcgtcctgattaca 14355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 14599 - 14518
Alignment:
Q  157 tccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcattt 238  Q
    ||||||||| |||||||||||||| ||||| ||| |||| ||||||||||| | | | |||| |||||| || |||||||||    
T  14599 tccctgtaaatataggtcatttgaattttcgtccttgaagttactaatccttcaaatctgccactgtaaatattaatcattt 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 10839 - 10786
Alignment:
Q  152 tttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  10839 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 10786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 11043 - 10979
Alignment:
Q  141 ttaaatatgcttttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 205  Q
    |||||||||  |||| |||||| || |||||||||||||| ||||| ||| |||| |||||||||    
T  11043 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 10979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 14242 - 14157
Alignment:
Q  173 tcatttgatttttcatccctgaacttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 258  Q
    |||||||| |||||||| ||||| ||||||||||| ||| | |||||||  || || |||||||||||   || ||||||||||||    
T  14242 tcatttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcatttgacttttggtcctaattaca 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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