View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21306_high_5 (Length: 333)

Name: NF21306_high_5
Description: NF21306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21306_high_5
NF21306_high_5
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-309)||(43104-43412)
[»] chr8 (37 HSPs)
chr8 (208-309)||(13160677-13160779)
chr8 (208-309)||(45071240-45071342)
chr8 (240-315)||(2626488-2626563)
chr8 (208-309)||(12670307-12670408)
chr8 (239-309)||(17823551-17823621)
chr8 (229-309)||(28407391-28407471)
chr8 (208-309)||(36720771-36720874)
chr8 (230-304)||(18164840-18164914)
chr8 (217-309)||(39461062-39461156)
chr8 (240-305)||(30962864-30962929)
chr8 (241-309)||(20869588-20869656)
chr8 (241-309)||(30454187-30454255)
chr8 (208-309)||(28817683-28817786)
chr8 (208-309)||(35261654-35261757)
chr8 (240-310)||(26954106-26954176)
chr8 (240-308)||(20284164-20284232)
chr8 (240-308)||(21070793-21070861)
chr8 (240-308)||(14018060-14018128)
chr8 (208-306)||(29521742-29521842)
chr8 (240-307)||(24365151-24365218)
chr8 (239-309)||(7136619-7136689)
chr8 (243-309)||(24245426-24245491)
chr8 (240-309)||(6760797-6760866)
chr8 (240-309)||(25250497-25250566)
chr8 (207-302)||(31457155-31457251)
chr8 (240-308)||(42083790-42083858)
chr8 (229-308)||(44781585-44781665)
chr8 (208-309)||(44530124-44530227)
chr8 (212-308)||(44742580-44742678)
chr8 (240-309)||(8897855-8897924)
chr8 (240-308)||(22598133-22598201)
chr8 (208-298)||(23000276-23000365)
chr8 (241-305)||(35105902-35105966)
chr8 (240-301)||(11748282-11748343)
chr8 (208-309)||(12625864-12625968)
chr8 (268-308)||(11001069-11001109)
chr8 (240-308)||(26457691-26457759)
[»] chr2 (42 HSPs)
chr2 (208-309)||(12023976-12024078)
chr2 (208-315)||(25249795-25249903)
chr2 (208-309)||(8455373-8455476)
chr2 (240-309)||(17896234-17896303)
chr2 (208-309)||(11514411-11514514)
chr2 (212-309)||(24200686-24200785)
chr2 (217-309)||(7214509-7214603)
chr2 (241-307)||(45235910-45235976)
chr2 (240-309)||(14530293-14530362)
chr2 (212-306)||(10543676-10543772)
chr2 (240-308)||(21377164-21377232)
chr2 (241-309)||(23397741-23397809)
chr2 (208-309)||(17623539-17623642)
chr2 (208-309)||(17667977-17668080)
chr2 (208-309)||(22371032-22371132)
chr2 (240-306)||(5841006-5841072)
chr2 (208-308)||(9671156-9671257)
chr2 (230-304)||(17380317-17380391)
chr2 (208-309)||(21779318-21779419)
chr2 (229-309)||(17705470-17705551)
chr2 (240-309)||(19977805-19977874)
chr2 (240-309)||(25079809-25079878)
chr2 (247-307)||(99361-99421)
chr2 (240-308)||(29419980-29420048)
chr2 (231-306)||(44604832-44604907)
chr2 (240-306)||(5450263-5450329)
chr2 (229-283)||(14444730-14444784)
chr2 (208-309)||(27573596-27573698)
chr2 (240-308)||(4516442-4516510)
chr2 (240-308)||(33795261-33795329)
chr2 (240-312)||(40416962-40417034)
chr2 (240-309)||(39914397-39914466)
chr2 (209-308)||(44521431-44521532)
chr2 (240-299)||(4852305-4852364)
chr2 (232-299)||(25641487-25641554)
chr2 (229-309)||(44643497-44643579)
chr2 (240-306)||(17472949-17473015)
chr2 (208-308)||(23145755-23145857)
chr2 (208-308)||(23557545-23557647)
chr2 (240-309)||(26684712-26684782)
chr2 (208-285)||(10546161-10546241)
chr2 (255-299)||(31821447-31821491)
[»] chr6 (23 HSPs)
chr6 (213-308)||(9161099-9161195)
chr6 (208-309)||(1346939-1347040)
chr6 (208-309)||(1354814-1354915)
chr6 (217-309)||(12221983-12222077)
chr6 (240-309)||(6024208-6024277)
chr6 (217-301)||(29355923-29356009)
chr6 (240-309)||(3815168-3815237)
chr6 (240-308)||(14975171-14975239)
chr6 (241-307)||(2166504-2166570)
chr6 (241-307)||(2178137-2178203)
chr6 (208-308)||(13905036-13905138)
chr6 (240-309)||(8409218-8409287)
chr6 (240-309)||(24734608-24734677)
chr6 (240-315)||(20400636-20400711)
chr6 (240-306)||(12063445-12063511)
chr6 (252-309)||(8417447-8417504)
chr6 (217-308)||(12889402-12889495)
chr6 (240-309)||(14553487-14553555)
chr6 (240-309)||(15866128-15866197)
chr6 (241-306)||(28007604-28007671)
chr6 (240-309)||(24097556-24097625)
chr6 (208-279)||(33138838-33138911)
chr6 (240-306)||(32068074-32068137)
[»] chr5 (31 HSPs)
chr5 (208-309)||(41014294-41014396)
chr5 (208-309)||(8170041-8170142)
chr5 (217-316)||(27328720-27328821)
chr5 (208-299)||(22907922-22908014)
chr5 (241-309)||(37024646-37024714)
chr5 (208-308)||(2838754-2838856)
chr5 (217-309)||(38879556-38879650)
chr5 (212-308)||(208989-209086)
chr5 (241-306)||(22861758-22861823)
chr5 (240-309)||(43334177-43334246)
chr5 (241-309)||(35710288-35710356)
chr5 (208-309)||(24448865-24448968)
chr5 (217-309)||(4619172-4619266)
chr5 (212-309)||(31299607-31299705)
chr5 (208-297)||(32703411-32703500)
chr5 (208-300)||(1850624-1850717)
chr5 (240-308)||(23974756-23974824)
chr5 (240-304)||(34074653-34074717)
chr5 (240-309)||(1565406-1565475)
chr5 (240-307)||(22187262-22187329)
chr5 (240-308)||(28516525-28516593)
chr5 (208-309)||(22600429-22600532)
chr5 (265-308)||(39079882-39079925)
chr5 (230-308)||(39301099-39301178)
chr5 (208-281)||(43574609-43574684)
chr5 (263-301)||(9794473-9794511)
chr5 (255-309)||(17419889-17419943)
chr5 (208-273)||(19143000-19143066)
chr5 (240-285)||(22025542-22025587)
chr5 (268-309)||(31362454-31362495)
chr5 (256-304)||(10634253-10634301)
[»] chr4 (55 HSPs)
chr4 (208-309)||(5648234-5648336)
chr4 (208-309)||(6430683-6430785)
chr4 (208-309)||(14590812-14590916)
chr4 (203-309)||(30639355-30639462)
chr4 (208-309)||(48598882-48598983)
chr4 (240-308)||(54730225-54730293)
chr4 (208-309)||(5306721-5306823)
chr4 (208-309)||(40915804-40915906)
chr4 (208-309)||(47528587-47528688)
chr4 (209-309)||(11054206-11054306)
chr4 (217-309)||(16911537-16911631)
chr4 (208-309)||(20224959-20225060)
chr4 (241-303)||(39077886-39077948)
chr4 (240-309)||(16408694-16408763)
chr4 (240-309)||(44363223-44363292)
chr4 (229-308)||(17315378-17315457)
chr4 (229-308)||(42164228-42164307)
chr4 (208-304)||(17043451-17043549)
chr4 (208-308)||(47441587-47441689)
chr4 (232-309)||(55830803-55830881)
chr4 (240-309)||(21646939-21647008)
chr4 (240-309)||(30352682-30352751)
chr4 (209-305)||(30496380-30496476)
chr4 (229-306)||(32478865-32478942)
chr4 (244-308)||(12257688-12257752)
chr4 (208-310)||(47443927-47444035)
chr4 (230-305)||(49938671-49938746)
chr4 (208-309)||(8473679-8473780)
chr4 (240-306)||(23580299-23580365)
chr4 (212-304)||(54175043-54175137)
chr4 (240-309)||(14983809-14983878)
chr4 (244-308)||(487230-487294)
chr4 (208-306)||(9832370-9832468)
chr4 (208-309)||(19027823-19027926)
chr4 (212-309)||(25343162-25343261)
chr4 (208-309)||(37494826-37494929)
chr4 (257-308)||(50856344-50856395)
chr4 (263-309)||(5313108-5313154)
chr4 (240-298)||(25463108-25463166)
chr4 (240-306)||(30690274-30690340)
chr4 (229-299)||(32629348-32629418)
chr4 (217-309)||(55766532-55766626)
chr4 (240-301)||(7385567-7385628)
chr4 (240-309)||(10660379-10660448)
chr4 (240-309)||(10874524-10874593)
chr4 (243-308)||(43035224-43035289)
chr4 (265-309)||(23501768-23501812)
chr4 (240-308)||(35567146-35567214)
chr4 (241-301)||(41018885-41018945)
chr4 (240-308)||(54640430-54640498)
chr4 (240-308)||(54966997-54967065)
chr4 (208-266)||(7909338-7909397)
chr4 (231-309)||(44357195-44357274)
chr4 (265-307)||(3580952-3580994)
chr4 (208-285)||(29207955-29208032)
[»] chr1 (49 HSPs)
chr1 (208-309)||(32632614-32632716)
chr1 (208-307)||(38478339-38478438)
chr1 (242-308)||(14617037-14617103)
chr1 (208-309)||(34725155-34725256)
chr1 (208-309)||(47214509-47214610)
chr1 (210-309)||(41319865-41319966)
chr1 (240-308)||(18724636-18724704)
chr1 (237-309)||(27474279-27474351)
chr1 (230-309)||(22930148-22930227)
chr1 (208-306)||(45812594-45812692)
chr1 (208-308)||(11596512-11596613)
chr1 (208-307)||(25468320-25468421)
chr1 (237-309)||(45402093-45402164)
chr1 (208-310)||(19414436-19414538)
chr1 (242-309)||(20036218-20036285)
chr1 (208-309)||(23768377-23768480)
chr1 (212-309)||(27201645-27201744)
chr1 (208-309)||(46248010-46248113)
chr1 (212-308)||(17470407-17470505)
chr1 (217-309)||(18944641-18944735)
chr1 (217-309)||(30395794-30395888)
chr1 (240-309)||(6925098-6925167)
chr1 (240-309)||(20004183-20004252)
chr1 (252-309)||(34714621-34714678)
chr1 (240-309)||(46991802-46991871)
chr1 (229-308)||(35117847-35117927)
chr1 (237-308)||(33222983-33223054)
chr1 (247-305)||(9939463-9939521)
chr1 (240-309)||(10668218-10668292)
chr1 (211-307)||(12126897-12126993)
chr1 (240-305)||(22327101-22327166)
chr1 (208-307)||(44485166-44485267)
chr1 (240-308)||(2435878-2435946)
chr1 (240-308)||(2435984-2436052)
chr1 (208-309)||(4430083-4430186)
chr1 (240-308)||(25290162-25290232)
chr1 (240-306)||(18335379-18335445)
chr1 (212-273)||(22324927-22324989)
chr1 (208-285)||(35253244-35253321)
chr1 (240-309)||(8197041-8197110)
chr1 (240-308)||(27136743-27136811)
chr1 (244-308)||(50760321-50760385)
chr1 (212-285)||(35005145-35005220)
chr1 (255-309)||(6983915-6983969)
chr1 (208-285)||(31272432-31272510)
chr1 (263-309)||(40424740-40424786)
chr1 (240-285)||(23371146-23371191)
chr1 (240-308)||(50811938-50812006)
chr1 (240-308)||(52910216-52910284)
[»] scaffold0005 (1 HSPs)
scaffold0005 (208-309)||(226462-226566)
[»] chr3 (42 HSPs)
chr3 (229-309)||(10870031-10870111)
chr3 (203-309)||(12914087-12914195)
chr3 (208-309)||(26869704-26869806)
chr3 (209-309)||(7696945-7697045)
chr3 (208-309)||(22122974-22123075)
chr3 (240-309)||(8247780-8247849)
chr3 (208-308)||(22609764-22609865)
chr3 (230-305)||(5173801-5173876)
chr3 (217-305)||(13628858-13628948)
chr3 (208-309)||(16735438-16735540)
chr3 (217-309)||(46421103-46421197)
chr3 (209-309)||(1217087-1217187)
chr3 (240-309)||(13730695-13730764)
chr3 (240-316)||(26782356-26782432)
chr3 (208-307)||(39203515-39203614)
chr3 (240-307)||(34420735-34420802)
chr3 (208-309)||(40272869-40272972)
chr3 (208-308)||(26573125-26573227)
chr3 (217-309)||(29366788-29366882)
chr3 (244-309)||(52926305-52926370)
chr3 (210-309)||(6411881-6411981)
chr3 (240-304)||(30928238-30928302)
chr3 (240-308)||(35417914-35417982)
chr3 (240-308)||(45620920-45620988)
chr3 (240-308)||(53062036-53062104)
chr3 (208-309)||(4495721-4495824)
chr3 (240-298)||(516417-516475)
chr3 (240-307)||(9607202-9607269)
chr3 (229-295)||(33926094-33926160)
chr3 (212-308)||(53996627-53996725)
chr3 (208-303)||(7942993-7943090)
chr3 (208-283)||(54032616-54032693)
chr3 (240-308)||(19731000-19731068)
chr3 (207-310)||(21796831-21796935)
chr3 (268-308)||(48667156-48667196)
chr3 (240-307)||(25944468-25944535)
chr3 (262-308)||(31542411-31542457)
chr3 (208-273)||(31592882-31592947)
chr3 (212-295)||(45139539-45139624)
chr3 (208-260)||(47624088-47624141)
chr3 (212-278)||(10795486-10795554)
chr3 (240-308)||(19751576-19751644)
[»] chr7 (57 HSPs)
chr7 (240-309)||(19426980-19427049)
chr7 (208-308)||(40463853-40463954)
chr7 (241-309)||(47077945-47078013)
chr7 (208-309)||(21172066-21172167)
chr7 (208-309)||(33871967-33872069)
chr7 (217-309)||(43557447-43557541)
chr7 (240-309)||(27629609-27629678)
chr7 (208-309)||(2541076-2541180)
chr7 (208-307)||(10693130-10693229)
chr7 (237-309)||(39123865-39123937)
chr7 (230-309)||(42495916-42495995)
chr7 (208-309)||(42798644-42798747)
chr7 (208-309)||(32758236-32758337)
chr7 (208-309)||(34626265-34626367)
chr7 (217-309)||(46354169-46354263)
chr7 (208-304)||(28078189-28078286)
chr7 (240-309)||(42805499-42805568)
chr7 (229-309)||(18327009-18327089)
chr7 (208-309)||(11617645-11617748)
chr7 (240-308)||(29907393-29907463)
chr7 (208-302)||(42391157-42391251)
chr7 (251-309)||(35334916-35334974)
chr7 (208-309)||(42476848-42476949)
chr7 (242-307)||(7193062-7193127)
chr7 (208-308)||(19265791-19265892)
chr7 (240-309)||(22699061-22699130)
chr7 (240-308)||(3469270-3469338)
chr7 (208-307)||(6736867-6736967)
chr7 (240-308)||(16341254-16341322)
chr7 (240-308)||(28362236-28362304)
chr7 (208-309)||(48735179-48735281)
chr7 (211-280)||(15108457-15108527)
chr7 (208-285)||(31591166-31591243)
chr7 (217-305)||(47716438-47716528)
chr7 (208-308)||(48123541-48123643)
chr7 (240-309)||(7644931-7645000)
chr7 (240-309)||(7794597-7794666)
chr7 (241-309)||(13805077-13805145)
chr7 (231-309)||(5180238-5180317)
chr7 (219-309)||(22065563-22065654)
chr7 (240-283)||(38262287-38262330)
chr7 (208-308)||(23419731-23419833)
chr7 (240-290)||(35203433-35203483)
chr7 (238-308)||(44123710-44123780)
chr7 (240-309)||(1424001-1424070)
chr7 (208-283)||(7879639-7879716)
chr7 (240-308)||(14099097-14099165)
chr7 (240-308)||(14409114-14409182)
chr7 (229-285)||(32233214-32233270)
chr7 (203-261)||(38604550-38604609)
chr7 (208-305)||(11741774-11741871)
chr7 (255-309)||(14732928-14732982)
chr7 (208-285)||(18512510-18512588)
chr7 (240-285)||(8491918-8491963)
chr7 (240-285)||(8518727-8518772)
chr7 (230-308)||(12473280-12473359)
chr7 (240-308)||(42101976-42102044)
[»] scaffold0187 (2 HSPs)
scaffold0187 (211-309)||(10110-10208)
scaffold0187 (211-309)||(20438-20536)
[»] scaffold0168 (1 HSPs)
scaffold0168 (208-309)||(30554-30655)
[»] scaffold0258 (1 HSPs)
scaffold0258 (208-308)||(13081-13182)
[»] scaffold1176 (1 HSPs)
scaffold1176 (210-316)||(1646-1752)
[»] scaffold0223 (1 HSPs)
scaffold0223 (208-309)||(11107-11207)
[»] scaffold0254 (1 HSPs)
scaffold0254 (241-307)||(4134-4200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (240-309)||(58952-59021)
[»] scaffold0057 (3 HSPs)
scaffold0057 (240-315)||(46800-46875)
scaffold0057 (263-307)||(46997-47041)
scaffold0057 (208-309)||(24829-24927)
[»] scaffold0036 (1 HSPs)
scaffold0036 (208-298)||(35074-35167)
[»] scaffold0116 (1 HSPs)
scaffold0116 (237-309)||(8866-8938)
[»] scaffold0018 (1 HSPs)
scaffold0018 (207-280)||(72923-72999)
[»] scaffold0024 (1 HSPs)
scaffold0024 (256-307)||(83852-83903)
[»] scaffold0311 (1 HSPs)
scaffold0311 (240-309)||(10785-10854)


Alignment Details
Target: scaffold0031 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 43412 - 43104
Alignment:
Q  1 ccgcaaatatctgtccatactatgttatgacctgtccactatccataataagctatcgccttgacggtgcaaaatagagtcaaagagggtgtctctcttt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43412 ccgcaaatatctgtccatactatgttacgacctgtccactatccattataagctatcgccttgacggtgcaaaatagagtcaaagagggtgtctctcttt 43313  T
Q  101 tatttgattttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttataaaagcacaattcgatgtattgaagctccc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| ||    
T  43312 tatttgattttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttataaaaggacaattcggtgtactgaagctgcc 43213  T
Q  201 gcgtcttaccatttgatgtattgtatgcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 300  Q
    |||||  ||||||||||||||||||   | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |    
T  43212 gcgtcccaccatttgatgtattgtaaatgtcttactctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaata 43113  T
Q  301 actttacca 309  Q
    |||||||||    
T  43112 actttacca 43104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 13160779 - 13160677
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  13160779 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaacttta 13160680  T
Q  307 cca 309  Q
    |||    
T  13160679 cca 13160677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 45071342 - 45071240
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| || |||||||| ||||||||| | ||||||||||||||||||||    
T  45071342 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaacttta 45071243  T
Q  307 cca 309  Q
    |||    
T  45071242 cca 45071240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 2626563 - 2626488
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagtgcg 315  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  2626563 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcg 2626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 12670307 - 12670408
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12670307 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12670405  T
Q  307 cca 309  Q
    |||    
T  12670406 cca 12670408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 17823621 - 17823551
Alignment:
Q  239 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  17823621 gtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacca 17823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 28407471 - 28407391
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  28407471 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 28407391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 36720874 - 36720771
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  36720874 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 36720775  T
Q  306 acca 309  Q
    ||||    
T  36720774 acca 36720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 18164840 - 18164914
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  18164840 ccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 39461062 - 39461156
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||  || |||||||||||||||||||    
T  39461062 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttacca 39461156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 20869588 - 20869656
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20869656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 30454187 - 30454255
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 30454255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 28817683 - 28817786
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||| | ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  28817683 accattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 28817782  T
Q  306 acca 309  Q
    ||||    
T  28817783 acca 28817786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 35261757 - 35261654
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||| |  ||||||||||||||||||    
T  35261757 accatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaacttt 35261658  T
Q  306 acca 309  Q
    ||||    
T  35261657 acca 35261654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 26954176 - 26954106
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaa 310  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||   ||||||||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaa 26954106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 20284164 - 20284232
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  20284164 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 21070793 - 21070861
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  21070793 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 14018060 - 14018128
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||| ||||| |||||||||| |||||    
T  14018060 tttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 29521742 - 29521842
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||| |  ||||| ||||||||||||    
T  29521742 accatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaacttt 29521841  T
Q  306 a 306  Q
    |    
T  29521842 a 29521842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 24365151 - 24365218
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||   ||||||||||||||||||||    
T  24365151 tttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 7136619 - 7136689
Alignment:
Q  239 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||||  |||||| ||||||||||| | ||||||| |  ||||||||||||||||||||||    
T  7136619 gtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacca 7136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 24245491 - 24245426
Alignment:
Q  243 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  24245491 ttacataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 24245426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 6760866 - 6760797
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||    ||| ||||||||||||||||||    
T  6760866 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttacca 6760797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 25250566 - 25250497
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||| || ||||||| |||||||||||  |||||||| |  ||||||||||||||||||||||    
T  25250566 tttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacca 25250497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 31457251 - 31457155
Alignment:
Q  207 taccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 302  Q
    ||||||||||||||||||| || |||||   || ||||||||||||||  |||||  ||||||||||| |||||||||||   ||||||||||||||    
T  31457251 taccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 42083790 - 42083858
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||| || ||||||| ||||||||||| |||||||||||  |||| ||||||||| ||||||    
T  42083790 tttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 44781585 - 44781665
Alignment:
Q  229 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||| |||| |||||||||||||  |||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  44781585 gccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 44530227 - 44530124
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| |||||||| |||||||||  |||||| | ||||||||| |||||||||    |||||||||| |||||||    
T  44530227 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaacttt 44530128  T
Q  306 acca 309  Q
    ||||    
T  44530127 acca 44530124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 44742580 - 44742678
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||||||| || ||||||| |||||||| ||||| |||| |||||| || |||||||||| ||||||| | |||||  |||||||||||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaacaactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 8897855 - 8897924
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||| |  |||||| ||||||| ||| ||||||||| |  ||||||||||||||||||||||    
T  8897855 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttacca 8897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 22598201 - 22598133
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||  ||||||||||||||||    
T  22598201 tttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 23000276 - 23000365
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 298  Q
    |||||||| |||||||||||   ||||||  |||||||||||||||| ||||||| |||||||  || |||||||||||  |||||||||||    
T  23000276 accatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 35105966 - 35105902
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||   ||| |||||||||||||    
T  35105966 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 11748343 - 11748282
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    |||||||| ||||| ||||||| | ||||||||| |||||| ||||  ||||||||||||||    
T  11748343 tttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 12625968 - 12625864
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||| |||||||||||| | ||||| ||||||||  |||||||||  |||||| ||||||||| | ||||||||     ||||| |||||||||||    
T  12625968 accatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactt 12625869  T
Q  305 tacca 309  Q
    |||||    
T  12625868 tacca 12625864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 11001069 - 11001109
Alignment:
Q  268 ttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| || |||||||| ||||||||||||||||||||||    
T  11001069 ttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 26457759 - 26457691
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||| ||| ||| || ||| ||||| | ||||||||| |||||  |||||||||||||||    
T  26457759 tttttacacaagaaactctttttaagacctgaacccatgacctttcaatcacgcgacaacaactttacc 26457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 12023976 - 12024078
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12023976 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12024075  T
Q  307 cca 309  Q
    |||    
T  12024076 cca 12024078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 25249795 - 25249903
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||| |  |||||||||||||||||||    
T  25249795 accatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaacttta 25249894  T
Q  307 ccaagtgcg 315  Q
    |||| ||||    
T  25249895 ccaattgcg 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 8455373 - 8455476
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  8455373 accatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 8455472  T
Q  306 acca 309  Q
    ||||    
T  8455473 acca 8455476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 17896303 - 17896234
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  17896303 tttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttacca 17896234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 11514514 - 11514411
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || |||||||| ||||||| ||||||||| ||||||| |||| |||||| ||||||||| |  ||||||||||||||||||    
T  11514514 accatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaacttt 11514415  T
Q  306 acca 309  Q
    ||||    
T  11514414 acca 11514411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 24200686 - 24200785
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||| ||||  ||||||||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 7214603 - 7214509
Alignment:
Q  217 tgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||||| | ||||||||| | |||||||||  ||||||||||||||||||||||    
T  7214603 tgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacca 7214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 45235910 - 45235976
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||    
T  45235910 ttttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 14530362 - 14530293
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  14530362 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 14530293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 10543772 - 10543676
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||| ||||||||| || ||||||| |||||||| ||||||||| | ||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 21377164 - 21377232
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  21377164 tttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 23397809 - 23397741
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 23397741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 17623642 - 17623539
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  |||||| ||||||||||| ||||||||| |  || |||||||||||||||    
T  17623642 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaacttt 17623543  T
Q  306 acca 309  Q
    ||||    
T  17623542 acca 17623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 17668080 - 17667977
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  | |||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  17668080 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 17667981  T
Q  306 acca 309  Q
    ||||    
T  17667980 acca 17667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 22371132 - 22371032
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||  ||| ||||||| ||||||||||| ||||||||  |  |||||||||||||||||||    
T  22371132 accatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaacttta 22371035  T
Q  307 cca 309  Q
    |||    
T  22371034 cca 22371032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 5841072 - 5841006
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  5841072 tttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 9671257 - 9671156
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||| |||||| |||||| |||| | ||||||||||||||||||    
T  9671257 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaacttt 9671159  T
Q  306 acc 308  Q
    |||    
T  9671158 acc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 17380317 - 17380391
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||| |||||| ||||||||||  |||||| | ||||||||| |||||||||||| |||||||||||||||||    
T  17380317 ccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 21779318 - 21779419
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| |||| || ||||||||||| |||||||||||  ||||||||||||||||| |    
T  21779318 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttca 21779416  T
Q  307 cca 309  Q
    |||    
T  21779417 cca 21779419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 17705551 - 17705470
Alignment:
Q  229 gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||||||||    ||||||||||||||||||||||    
T  17705551 gccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttacca 17705470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 19977805 - 19977874
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| ||||| ||||||| || |||||||| |||||||||||| ||||||||||||||||| ||||    
T  19977805 tttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcacca 19977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 25079809 - 25079878
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||    
T  25079809 tttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttacca 25079878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 99361 - 99421
Alignment:
Q  247 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| ||||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  99361 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 29419980 - 29420048
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||  |||  ||||||||||||||||    
T  29419980 tttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 44604907 - 44604832
Alignment:
Q  231 cttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||| |||||||||||||||||  |||||| |||||||||||  |||||||| |  |||||||||||||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 5450329 - 5450263
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||    
T  5450329 tttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 14444784 - 14444730
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctt 283  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  14444784 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 27573698 - 27573596
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || |||||||  ||||| |||||||||| ||||| |  ||||||||||   |||||||||  |||||||||||||||||||    
T  27573698 accatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaacttta 27573599  T
Q  307 cca 309  Q
    |||    
T  27573598 cca 27573596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 4516442 - 4516510
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||  |||| ||||||||||||||||    
T  4516442 tttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 33795329 - 33795261
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||| ||||||  ||||||  |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  33795329 tttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 40416962 - 40417034
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagt 312  Q
    |||||| |||||||  |||||| | ||||||||| ||||||||| |  |||||||||||||||||||||||||    
T  40416962 tttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttaccaagt 40417034  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 39914397 - 39914466
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||| || |||||| | ||||||||| |  ||||||||||||||||||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacca 39914466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 44521431 - 44521532
Alignment:
Q  209 ccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||| |||||| ||||| |||||||  |||||| ||||||||||| |||||| | || |||||| |||||||||||  |||| ||| ||||||||||    
T  44521431 ccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaacttta 44521530  T
Q  307 cc 308  Q
    ||    
T  44521531 cc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 4852305 - 4852364
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 299  Q
    ||||| |||||||||||||||  ||||||||||| | |||| ||||| ||||||||||||    
T  4852305 ttttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatgacaac 4852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 25641554 - 25641487
Alignment:
Q  232 ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 299  Q
    |||| ||||||| |||||| |  ||||||| ||||||||||| |||||||||||  ||||||||||||    
T  25641554 ttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 44643579 - 44643497
Alignment:
Q  229 gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||  ||  ||||| || ||||||| |||||||| |||||||||||  ||||||||  ||||||||||||    
T  44643579 gccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 17473015 - 17472949
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||||||| || || |||||| ||| ||||| ||||||||||| ||||  ||||||||||||||    
T  17473015 tttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaacttta 17472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 23145755 - 23145857
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23145755 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23145854  T
Q  306 acc 308  Q
    |||    
T  23145855 acc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 23557545 - 23557647
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23557545 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23557644  T
Q  306 acc 308  Q
    |||    
T  23557645 acc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 26684712 - 26684782
Alignment:
Q  240 tttttacacaagaga-ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  ||||||  ||||||| |||   ||||||||| |||||||||||||||||||||||    
T  26684712 tttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttacca 26684782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 10546241 - 10546161
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||||| ||||||||| || ||||||| ||||||||  | |||||||  |||||| ||||||||||| |||||||||||    
T  10546241 accatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 31821447 - 31821491
Alignment:
Q  255 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaac 299  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||    
T  31821447 ctgtttctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 9161195 - 9161099
Alignment:
Q  213 ttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||||    
T  9161195 ttgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 1347040 - 1346939
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  1347040 accatttggtgtattgtacgcagccttaccctgtttt-acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 1346942  T
Q  307 cca 309  Q
    |||    
T  1346941 cca 1346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 1354814 - 1354915
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  1354814 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaacttta 1354912  T
Q  307 cca 309  Q
    |||    
T  1354913 cca 1354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 12221983 - 12222077
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| | ||||||||| |||||||||||  ||||||||||||||||||||||    
T  12221983 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacca 12222077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 6024277 - 6024208
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| |||||||||||| |||||  ||||||||| | |||||||||||||||||||||||    
T  6024277 tttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttacca 6024208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 29355923 - 29356009
Alignment:
Q  217 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  29355923 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 3815168 - 3815237
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||| || ||||||| ||||||||||| |||||| ||||  ||||||||||||||||||||||    
T  3815168 tttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 3815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 14975171 - 14975239
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||| |  |||||||||||||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 2166504 - 2166570
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2166504 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 2178137 - 2178203
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2178137 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 13905036 - 13905138
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| || ||||||||| ||||||| ||||||| ||||||||||   ||||  ||||||||| | |||||||||||  ||||||||||||||||||    
T  13905036 accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaacttt 13905135  T
Q  306 acc 308  Q
    |||    
T  13905136 acc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 8409287 - 8409218
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| | ||||| ||||||||||  |||||||||||  |||||| |||||||||||||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttacca 8409218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 24734677 - 24734608
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||| |||| |||||||  |||||||||  ||||||||||||||||||||||    
T  24734677 tttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttacca 24734608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 20400711 - 20400636
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagtgcg 315  Q
    ||||||||||||||| |||||| |  ||||||||  ||||||||||  |||||||||||||||| |||||| ||||    
T  20400711 tttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcg 20400636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 12063511 - 12063445
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||| ||||||| || |||||||||||||||| |||||||||||  || ||||| ||||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 8417504 - 8417447
Alignment:
Q  252 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| | ||| |||||||||||| ||||  ||||||||||||||||||||||    
T  8417504 agactgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttacca 8417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 12889495 - 12889402
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttta-cacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||| ||||| | ||||||||| |||||||| ||||||  | |||||||||  ||||||||||  |||| ||||||||||||||||    
T  12889495 tgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 14553555 - 14553487
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||  || |||| |||||||||||  ||||||||| | ||||||||||||||||||||||    
T  14553555 tttttacacaagaagctatttccaggacttgaacctgtgacctttag-tcacatgacaacaactttacca 14553487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 15866128 - 15866197
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||  ||||| ||||||| |||| |||||| | ||||||||| |||||||| ||||||||||||||    
T  15866128 tttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttacca 15866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 28007671 - 28007604
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcga--tcacatgacaacaacttta 306  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||  |  |||||||||||||||||||    
T  28007671 ttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 24097625 - 24097556
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| ||||||| ||| ||| ||||||| |||||||||||||||  | |||||||| ||| |||||||    
T  24097625 tttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttacca 24097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 33138911 - 33138838
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtga 279  Q
    |||||||| ||||||||| ||| ||||||||||||||| | |||||||  |||||| ||||||||||| |||||    
T  33138911 accatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 32068137 - 32068074
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||||||||||   ||||| | |||||||||  ||||||||||| |||| ||||||||||||||    
T  32068137 tttttacacaagag---gtttccaagacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 41014396 - 41014294
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  41014396 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 41014297  T
Q  307 cca 309  Q
    |||    
T  41014296 cca 41014294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 8170041 - 8170142
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||| || ||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  8170041 accatttggtgtattgtacgcagccttaccctgtttt-acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 8170139  T
Q  307 cca 309  Q
    |||    
T  8170140 cca 8170142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 27328821 - 27328720
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagtgc 314  Q
    ||||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||||  ||||||||||  ||||||||||||||||||||||| |||    
T  27328821 tgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgc 27328722  T
Q  315 gt 316  Q
    ||    
T  27328721 gt 27328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 22907922 - 22908014
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 299  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||| | |||||||||  |||||| |||||    
T  22907922 accatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 37024646 - 37024714
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 37024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 2838856 - 2838754
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgaccttt-cgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||  ||||||||  ||||||| |||||||||||| |  ||||||||||||||||||    
T  2838856 accatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaacttt 2838757  T
Q  306 acc 308  Q
    |||    
T  2838756 acc 2838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 38879650 - 38879556
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  38879650 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 38879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 208989 - 209086
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||||| |||| ||||||| |||||||||||||||||  |||| | |||||||||||| |||||||||   |||||||||||||||||||||    
T  208989 tttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 22861758 - 22861823
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||  |||||||||||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 43334246 - 43334177
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| ||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  43334246 tttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 43334177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 35710356 - 35710288
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  | ||||||||||||||||||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttacca 35710288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 24448968 - 24448865
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| || ||||| |||||| || ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  24448968 accatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 24448869  T
Q  306 acca 309  Q
    ||||    
T  24448868 acca 24448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 4619172 - 4619266
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||||||| |||||||||| || |||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  4619172 tgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 4619266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 31299705 - 31299607
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| || |  |||| ||||||| | ||||||| |||||||||||||||||||| ||||||| |   ||||||||||||||||||||||    
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttacca 31299607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 32703500 - 32703411
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgaca 297  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||    
T  32703500 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 1850717 - 1850624
Alignment:
Q  208 accatttgatgtattgtatgcgcc-ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 300  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||  | ||||  |||||||||| |||||||||||  |||||||||||||    
T  1850717 accatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 23974824 - 23974756
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  |||||||||||||||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||  |||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 1565475 - 1565406
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||  |||||| ||||||||||| || ||||||||  ||||||||||||||||||||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacca 1565406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 22187329 - 22187262
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||| ||||||| ||||||| |||  ||||||||||  ||| ||||||||||||||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 28516525 - 28516593
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||||| | ||||||||| |||||||||||   ||| ||||||||||||||||    
T  28516525 tttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 22600532 - 22600429
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| |||||||||  | ||||||| |||| |||||||||| | | |||||| ||||||||||| ||| ||||| |  |||||||| |||||||||    
T  22600532 accatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaacttt 22600433  T
Q  306 acca 309  Q
    ||||    
T  22600432 acca 22600429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 39079882 - 39079925
Alignment:
Q  265 gacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||| |||||||||||  |||||||||||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 39301178 - 39301099
Alignment:
Q  230 ccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| ||||||| ||||||||||  |||| | | ||||||||| |||||||||||  | |||||||||||||||||||    
T  39301178 ccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 43574684 - 43574609
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacc 281  Q
    |||||||| | ||||||| || ||||||| ||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  43574684 accatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Original strand, 9794473 - 9794511
Alignment:
Q  263 aggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  9794473 aggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 17419943 - 17419889
Alignment:
Q  255 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||||||||||| |||||||  |||||| ||||||| |||||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttacca 17419889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 19143000 - 19143066
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 273  Q
    |||||||| |||| |||| || ||||||| |||||||||||||||||  |||||| |||||||||||    
T  19143000 accatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 22025587 - 22025542
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||||    
T  22025587 tttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  268 ttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 10634253 - 10634301
Alignment:
Q  256 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||||||||||||| | |||||||||  |||| ||||||||||||    
T  10634253 tgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 5648336 - 5648234
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  5648336 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaacttta 5648237  T
Q  307 cca 309  Q
    |||    
T  5648236 cca 5648234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 6430683 - 6430785
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||||  |||||||||||||||||||    
T  6430683 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaacttta 6430782  T
Q  307 cca 309  Q
    |||    
T  6430783 cca 6430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 14590916 - 14590812
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  14590916 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 14590817  T
Q  305 tacca 309  Q
    |||||    
T  14590816 tacca 14590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 30639462 - 30639355
Alignment:
Q  203 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| |||||||||||  ||||||||||  ||||| ||||||||    
T  30639462 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaa 30639363  T
Q  302 ctttacca 309  Q
    ||||||||    
T  30639362 ctttacca 30639355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 48598882 - 48598983
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  48598882 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 48598980  T
Q  307 cca 309  Q
    |||    
T  48598981 cca 48598983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 54730293 - 54730225
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  54730293 tttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 5306721 - 5306823
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||| ||||||||    
T  5306721 accatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaacttta 5306820  T
Q  307 cca 309  Q
    |||    
T  5306821 cca 5306823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 40915906 - 40915804
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || |||||||  |||||||||||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||    
T  40915906 accatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaacttta 40915807  T
Q  307 cca 309  Q
    |||    
T  40915806 cca 40915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 47528587 - 47528688
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  47528587 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 47528685  T
Q  307 cca 309  Q
    |||    
T  47528686 cca 47528688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 11054206 - 11054306
Alignment:
Q  209 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| ||||||||| || | ||||| ||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccctgtttt-acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttac 11054304  T
Q  308 ca 309  Q
    ||    
T  11054305 ca 11054306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 16911631 - 16911537
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  16911631 tgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttacca 16911537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 20225060 - 20224959
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||  |||||| ||||||||||| | |||||||||  |||||||||||||||||||    
T  20225060 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 20224962  T
Q  307 cca 309  Q
    |||    
T  20224961 cca 20224959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 39077886 - 39077948
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 303  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  39077886 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 16408694 - 16408763
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  16408694 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 16408763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 44363223 - 44363292
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| ||| ||||||  |||||||||||||||||||||||  ||||||||||||||||||||||    
T  44363223 tttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacca 44363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 17315378 - 17315457
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||  ||||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||||    
T  17315378 gccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 42164228 - 42164307
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||| |||||||||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||| ||||||    
T  42164228 gccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 17043451 - 17043549
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| |||||||||||  ||||||||||  |||| ||||||||||||    
T  17043451 accatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 47441587 - 47441689
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| |||||||||  | ||||||| ||| |||||||| |||||||||||||| ||||||||||  ||||||||||  |||| |||||||||||||    
T  47441587 accatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaacttt 47441686  T
Q  306 acc 308  Q
    |||    
T  47441687 acc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 55830803 - 55830881
Alignment:
Q  232 ttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttacca 309  Q
    |||| ||||||  ||||||||||||||||| |  |||||||||| |||||||| |||||||||||||||||||||||||    
T  55830803 ttaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttacca 55830881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 21647008 - 21646939
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| |||||||||||  |||||||| |  ||||||||||||||||||||||    
T  21647008 tttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttacca 21646939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 30352682 - 30352751
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||  ||| |||||||||||| |||| |||||||||||||||||    
T  30352682 tttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttacca 30352751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 30496380 - 30496476
Alignment:
Q  209 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||| |||||||||||| ||||||| | || |||||||||||| ||||||| | ||||||||| |||||||||||  |||| |||||||||||||    
T  30496380 ccatttggtgtattgtatgcagccttaccc-gtgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 32478865 - 32478942
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    ||||||| |||||||||||| ||||  |||||| |||||||||||  ||||||| ||| |||||||||||||||||||    
T  32478865 gccttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  244 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 47444035 - 47443927
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt----tcgatcacatgacaacaa 301  Q
    |||||||| ||||||||| || ||||||| |||||||| || |||||| ||||||| ||||||||||| |||||||||    ||| |||||||| |||||    
T  47444035 accatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaa 47443936  T
Q  302 ctttaccaa 310  Q
    |||||||||    
T  47443935 ctttaccaa 47443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 49938671 - 49938746
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||  ||||||||||  |||| |||||||||||||    
T  49938671 ccttaccccgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 8473679 - 8473780
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||||||||| ||||||| |||||   ||||||||| ||||||| ||||||||||| ||  ||||| || ||| |||||||||||||||    
T  8473679 accatttggtgtattgtatgcagccttaccctgttaa-acacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaacttta 8473777  T
Q  307 cca 309  Q
    |||    
T  8473778 cca 8473780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 23580299 - 23580365
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||||||||| || ||||||| |||||||| |||||||||||  |||| ||||||||||||||    
T  23580299 tttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 54175137 - 54175043
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttttacacaagagactg-tttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||| ||||||||| || ||||||| ||||||||||||||||| ||| |||| ||||||||||  |||||| ||||  |||||||||||||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 14983878 - 14983809
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| | ||||||||  ||||||||| | |||| ||||||||||||||||||    
T  14983878 tttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacca 14983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 487230 - 487294
Alignment:
Q  244 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 9832370 - 9832468
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||  ||||||||||| |||||||||||  ||| || ||||||| ||||    
T  9832370 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 19027926 - 19027823
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||||||   |||||| ||||||||||| |||||||||||  |||| ||||||||||| |    
T  19027926 accaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactct 19027827  T
Q  306 acca 309  Q
    ||||    
T  19027826 acca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||| ||||||||| || ||||||| |||||||| |||||||||||| |||| || ||||||||  ||||||| ||  |||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 37494929 - 37494826
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| | ||||||||||  |||||| |||||||| |||||||||  |||||| |||||||||||  ||||||||||  || |||| ||||||||||    
T  37494929 accatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaacttt 37494830  T
Q  306 acca 309  Q
    ||||    
T  37494829 acca 37494826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 50856344 - 50856395
Alignment:
Q  257 gtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||||| ||||||||||| ||||  ||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttacc 50856395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 5313108 - 5313154
Alignment:
Q  263 aggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||    
T  5313108 aggaattgaacccgtgacctttcaatcacatgacaacaactttacca 5313154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 25463166 - 25463108
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 298  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||||  |||||||||||    
T  25463166 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 30690274 - 30690340
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 32629348 - 32629418
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 299  Q
    ||||||| ||||||||  ||||||| ||||||| |||| |||||| |||||||||||  ||||||||||||    
T  32629348 gccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 55766532 - 55766626
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||||||  |||||||| |||||||| |  |||||||| | |||||||| || ||||||||||||||||||||||    
T  55766532 tgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttacca 55766626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 7385567 - 7385628
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    |||||||||| ||| ||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  7385567 tttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 10660448 - 10660379
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  ||||||||||||||||||||||    
T  10660448 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacca 10660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 10874593 - 10874524
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  ||||||||||||||||||||||    
T  10874593 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacca 10874524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  243 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||  ||||||  |||||||||| |||||||||||  |||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23501812 - 23501768
Alignment:
Q  265 gacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 23501768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 35567214 - 35567146
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||| | ||||||| | ||||||||| | |||||||||  | |||||||||||||||||||    
T  35567214 tttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 41018885 - 41018945
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 301  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||| |||||||||    
T  41018885 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 54640430 - 54640498
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||| | ||||||||| |||||||||||   ||| ||||||||| ||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 54967065 - 54966997
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  | |||| || ||||||||  ||||||||||  |||||||||||||||||||||    
T  54967065 tttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 7909338 - 7909397
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctagga 266  Q
    |||||||| ||||||||| ||  |||||| ||||||||||||||||||||||||| ||||    
T  7909338 accatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 44357274 - 44357195
Alignment:
Q  231 cttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| ||| |||||||| ||  |||||||||||||||||||| |||||||||  | |||| |||| ||||||||||    
T  44357274 cttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  265 gacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 29207955 - 29208032
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| |  |||| ||||||||||| |||||||||||    
T  29207955 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggcaatttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 32632614 - 32632716
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  ||| |||||||||||||||    
T  32632614 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaacttta 32632713  T
Q  307 cca 309  Q
    |||    
T  32632714 cca 32632716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 38478339 - 38478438
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  38478339 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagttta 38478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 14617103 - 14617037
Alignment:
Q  242 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  14617103 tttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 34725155 - 34725256
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||  ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  34725155 accatttagtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 34725253  T
Q  307 cca 309  Q
    |||    
T  34725254 cca 34725256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 47214610 - 47214509
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| ||  |||||| ||||||| | ||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  47214610 accatttggtgtattgtacgcaaccttaccctgttttaa-acaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 47214512  T
Q  307 cca 309  Q
    |||    
T  47214511 cca 47214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 41319865 - 41319966
Alignment:
Q  210 catttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||| ||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||| |||  ||||||||||  ||||||||||||||||||||    
T  41319865 catttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttac 41319964  T
Q  308 ca 309  Q
    ||    
T  41319965 ca 41319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 18724636 - 18724704
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  18724636 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 27474351 - 27474279
Alignment:
Q  237 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||||||||||| | |||||||||  ||||||||||  ||||||||||||||||||||||    
T  27474351 ctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacca 27474279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 309
Target Start/End: Original strand, 22930148 - 22930227
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| |||||||||||||| || ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  22930148 ccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 22930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 45812594 - 45812692
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||||||||| ||||||| || |||| ||||||||||||||||  |||||||||||  ||||||||||  |||||||||||||||||||    
T  45812594 accatttggtgtattgtatgcagccttaccctctttt-acacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 11596613 - 11596512
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||| || || ||||||| |||||||||||||||||  |||||||||||||||||| |||||| ||||  |||||||||| | ||||||    
T  11596613 accatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccacttta 11596514  T
Q  307 cc 308  Q
    ||    
T  11596513 cc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 25468320 - 25468421
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||||  |||||| ||||||||||| | ||||||||| |||||||||||||||||||    
T  25468320 accatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaacttt 25468419  T
Q  306 ac 307  Q
    ||    
T  25468420 ac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 45402164 - 45402093
Alignment:
Q  237 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  45402164 ctgtttttacacaagaggctgtttccaggacttgaacccgttacc-ttccatcacatgacaacaactttacca 45402093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 19414538 - 19414436
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||  ||||||| ||| ||||| || |||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  19414538 accatttggtgtattgtacgcagccttaacctgtttt-acataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaacttta 19414440  T
Q  307 ccaa 310  Q
    ||||    
T  19414439 ccaa 19414436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 20036285 - 20036218
Alignment:
Q  242 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 23768377 - 23768480
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| | |||||||||  |||||||| |  ||||||||||||||||||    
T  23768377 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaacttt 23768476  T
Q  306 acca 309  Q
    ||||    
T  23768477 acca 23768480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 27201744 - 27201645
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||| ||||||||| || ||||||| |||||| | ||||||||| ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 46248010 - 46248113
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| | ||||||||| |||||| ||||  ||||||||||||||||||    
T  46248010 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaacttt 46248109  T
Q  306 acca 309  Q
    ||||    
T  46248110 acca 46248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||||||||||||||| | ||||| |||  |||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 18944735 - 18944641
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||| |||||||  ||||||||||  ||||||||||||||||||||||    
T  18944735 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttacca 18944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 30395794 - 30395888
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||||||    ||||||||||||||||||||||    
T  30395794 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttacca 30395888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 6925167 - 6925098
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| || |||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  6925167 tttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 6925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 20004183 - 20004252
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| |||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  20004183 tttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 20004252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 34714678 - 34714621
Alignment:
Q  252 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttacca 34714621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 46991871 - 46991802
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  46991871 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 46991802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 35117847 - 35117927
Alignment:
Q  229 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||| |||| ||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  35117847 gccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 33223054 - 33222983
Alignment:
Q  237 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||||| ||||||| | ||||| ||  |||||||||||  |||||||||||||||||||||    
T  33223054 ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 9939521 - 9939463
Alignment:
Q  247 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 10668292 - 10668218
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttc-----gatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||      |||||||||||||||||||||||    
T  10668292 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttacca 10668218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 12126897 - 12126993
Alignment:
Q  211 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| || |||| ||| ||||||||||| || ||||||||||||||||||    
T  12126897 atttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 22327166 - 22327101
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||||||||||  |||||| ||||||||||| || ||||||||  ||||||||||||||||||    
T  22327166 tttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 44485166 - 44485267
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || |||||||  ||| ||||||||||| |  |||||| ||||||  ||| ||||||||||| |||||||||||||||||||    
T  44485166 accatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcacatgacaacaacttt 44485265  T
Q  306 ac 307  Q
    ||    
T  44485266 ac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 2435878 - 2435946
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435878 ttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 2435984 - 2436052
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||| |||  |||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 4430083 - 4430186
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||| |||||||  | ||||| ||| ||||||||| |  ||||||||||||||||||    
T  4430083 accatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaacttt 4430182  T
Q  306 acca 309  Q
    ||||    
T  4430183 acca 4430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 25290232 - 25290162
Alignment:
Q  240 tttttacacaagagactgt--ttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||  ||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  25290232 tttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 18335379 - 18335445
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||| ||||||||||||||| ||||||| |||| ||||||||||   |||||||||| |||||||    
T  18335379 tttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaaacttta 18335445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 22324989 - 22324927
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 273  Q
    |||| |||||||||||| ||||||| ||||||||||||||||| ||||||| | |||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 35253244 - 35253321
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||| |||||    
T  35253244 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 8197110 - 8197041
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| |  || | ||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  8197110 tttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgacca 8197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 27136743 - 27136811
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||  |||| | || ||||||||||||| |||| | ||||| ||||||||||||||||    
T  27136743 tttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgacaacaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 50760321 - 50760385
Alignment:
Q  244 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||| ||||||  ||||||||||| |||||||| ||  |||||||||||| ||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 35005220 - 35005145
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| ||||||  | ||||||||| |||||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 6983915 - 6983969
Alignment:
Q  255 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| |||||||||||  ||||||||||  |||| |||||||||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 31272432 - 31272510
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    ||||||||||||  |||| || |||||||  ||||||||||||||||  |||||| |||||||||||  ||||||||||    
T  31272432 accatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 40424786 - 40424740
Alignment:
Q  263 aggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttacca 40424740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 23371191 - 23371146
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    ||||||| |||| | ||||||||||||||||||| |||||||||||    
T  23371191 tttttacccaagtggctgtttctaggacttgaacccgtgacctttc 23371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 50812006 - 50811938
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||  ||||||| ||||| |||   |||||||||||  |||| ||||||||||||||||    
T  50812006 tttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 52910284 - 52910216
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||  ||||| ||||||| | || ||||||  ||||||||||  |||||||||||||||||||||    
T  52910284 tttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 226462 - 226566
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  226462 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 226561  T
Q  305 tacca 309  Q
    |||||    
T  226562 tacca 226566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 9e-24; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 10870031 - 10870111
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  10870031 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10870111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 12914087 - 12914195
Alignment:
Q  203 gtcttaccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 300  Q
    |||| |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  12914087 gtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaaca 12914186  T
Q  301 actttacca 309  Q
    |||||||||    
T  12914187 actttacca 12914195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 26869806 - 26869704
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| |||||||||||| |||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  26869806 accatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 26869707  T
Q  307 cca 309  Q
    |||    
T  26869706 cca 26869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 7696945 - 7697045
Alignment:
Q  209 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||   ||||||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttac 7697043  T
Q  308 ca 309  Q
    ||    
T  7697044 ca 7697045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 22122974 - 22123075
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||| ||||    
T  22122974 accatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaattta 22123072  T
Q  307 cca 309  Q
    |||    
T  22123073 cca 22123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 8247780 - 8247849
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  8247780 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 8247849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 22609865 - 22609764
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| ||| ||||| |  |||||||||||||||||||    
T  22609865 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaacttta 22609766  T
Q  307 cc 308  Q
    ||    
T  22609765 cc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 5173801 - 5173876
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||| ||||||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  5173801 ccttactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 13628858 - 13628948
Alignment:
Q  217 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  13628858 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 16735540 - 16735438
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||||  ||||||| ||||||| ||||||||||| |||||| || |  |||||||||||||||||||    
T  16735540 accatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaacttta 16735441  T
Q  307 cca 309  Q
    |||    
T  16735440 cca 16735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 46421103 - 46421197
Alignment:
Q  217 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||   ||||||||||||||||||||||    
T  46421103 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttacca 46421197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 1217187 - 1217087
Alignment:
Q  209 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | ||||||| ||||||||||    
T  1217187 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttac 1217089  T
Q  308 ca 309  Q
    ||    
T  1217088 ca 1217087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 13730695 - 13730764
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  13730695 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 13730764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 26782432 - 26782356
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagtgcgt 316  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||||    
T  26782432 tttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgt 26782356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 39203614 - 39203515
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  39203614 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaacttta 39203516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 34420735 - 34420802
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||||    
T  34420735 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 40272869 - 40272972
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| ||||||||||| | ||||||| |  ||||||||||||||||||    
T  40272869 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaacttt 40272968  T
Q  306 acca 309  Q
    ||||    
T  40272969 acca 40272972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 26573227 - 26573125
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||    
T  26573227 accaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttt 26573128  T
Q  306 acc 308  Q
    |||    
T  26573127 acc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 29366788 - 29366882
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||||   ||||||||||||||||||||||    
T  29366788 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 29366882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 52926305 - 52926370
Alignment:
Q  244 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 52926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 6411881 - 6411981
Alignment:
Q  210 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||| ||||||  | ||||||||| | |||||| ||  | |||||||||||||||||||    
T  6411881 catttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T
Q  309 a 309  Q
    |    
T  6411981 a 6411981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 30928238 - 30928302
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| |||||    
T  30928238 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 35417982 - 35417914
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 45620920 - 45620988
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| ||||||| || |||||||| |||||||||||  |||| ||||||||||||||||    
T  45620920 tttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 53062104 - 53062036
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  53062104 ttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 4495721 - 4495824
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| || || |||  ||||||||||| ||||||||| |  ||||||||||||||||||    
T  4495721 accatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaacttt 4495820  T
Q  306 acca 309  Q
    ||||    
T  4495821 acca 4495824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 516475 - 516417
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 298  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||    
T  516475 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 9607269 - 9607202
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||| |||||| ||||||| |||||||||||   |||||||||  ||||||||||||||||||||    
T  9607269 tttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 33926160 - 33926094
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 295  Q
    ||||||| ||||||||||||||||| || |||| ||||||||||| | |||||||||  ||||||||    
T  33926160 gccttaccctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 53996627 - 53996725
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| | ||||||||| |||||||||||  ||| |||||||||| ||||||    
T  53996627 tttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 7943090 - 7942993
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 303  Q
    |||||||||||||||||| || | ||||| |||||||| | ||||||  ||||||| ||||||||||  ||||||||| |  ||||||||||||||||    
T  7943090 accatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 54032616 - 54032693
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctt 283  Q
    |||||| | |||||||||||| ||||||| ||||||| ||||||||||  |||||| ||||||||||| |||||||||    
T  54032616 accattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 19731068 - 19731000
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| ||||||||| ||||||    
T  19731068 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 21796831 - 21796935
Alignment:
Q  207 taccatttgatgtattgtat-gcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||||||||| |||||  | | ||||| || ||||||||||||||||||||| ||| | ||||||  |||||| |||  |||  |||||||||||||    
T  21796831 taccatttgatgttttgtacagagtcttaccctatttttacacaagagactgtttatagtatttgaacatgtgaccattccctcatgtgacaacaacttt 21796930  T
Q  306 accaa 310  Q
    |||||    
T  21796931 accaa 21796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 48667196 - 48667156
Alignment:
Q  268 ttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  48667196 ttgaactcgtgacctttccatcacatcacaacaactttacc 48667156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 25944535 - 25944468
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||||| |||| | ||||| ||||||||||| | |||||||||  |||| |||||||||||||||    
T  25944535 tttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 31542457 - 31542411
Alignment:
Q  262 taggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  31542457 taggatttgaattcgtgacctttcaatcatatgacaacaactttacc 31542411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 31592947 - 31592882
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 273  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  31592947 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 45139539 - 45139624
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 295  Q
    |||| |||||||||||| ||||||| |||| |||||||||||||  |||||| |  |||||||| |||||||||||  ||||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 47624141 - 47624088
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgttt 260  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||    
T  47624141 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  212 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtg 278  Q
    |||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 19751644 - 19751576
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| |||||| || ||||||    
T  19751644 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 19426980 - 19427049
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19426980 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacca 19427049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 40463954 - 40463853
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||| || || ||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||| |  |||||||||||||||||||    
T  40463954 accatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaacttta 40463855  T
Q  307 cc 308  Q
    ||    
T  40463854 cc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 47077945 - 47078013
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 47078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 21172066 - 21172167
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||    
T  21172066 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaacttta 21172164  T
Q  307 cca 309  Q
    |||    
T  21172165 cca 21172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 33871967 - 33872069
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||  |||||||||||||||||  |||||| ||||||||||| || ||||||||  |||||||||||||||||||    
T  33871967 accatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttta 33872066  T
Q  307 cca 309  Q
    |||    
T  33872067 cca 33872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 43557541 - 43557447
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  43557541 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 43557447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 27629678 - 27629609
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  27629678 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttacca 27629609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 2541076 - 2541180
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaactt 304  Q
    |||||||| ||||| ||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||| | |||||||||||||||||    
T  2541076 accatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactt 2541175  T
Q  305 tacca 309  Q
    |||||    
T  2541176 tacca 2541180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 10693130 - 10693229
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| || |||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  10693130 accatttggtgtattgtacgcagccttaccctctttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 39123937 - 39123865
Alignment:
Q  237 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | ||||  ||||||||||||||||||||||    
T  39123937 ctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 309
Target Start/End: Original strand, 42495916 - 42495995
Alignment:
Q  230 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 42495995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 42798747 - 42798644
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||||| |  ||||||||||||||||||    
T  42798747 accatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaacttt 42798648  T
Q  306 acca 309  Q
    ||||    
T  42798647 acca 42798644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 32758337 - 32758236
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||||||  | ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  32758337 accatttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 32758239  T
Q  307 cca 309  Q
    |||    
T  32758238 cca 32758236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 34626265 - 34626367
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||| | || ||||||| ||||||||||||| ||| ||||||| ||||||||||   ||| |||||| ||||||||||||||||||||    
T  34626265 accatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaacttta 34626364  T
Q  307 cca 309  Q
    |||    
T  34626365 cca 34626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 46354263 - 46354169
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||| || ||||||| |||||||| |||||||||  |||||| ||||||||||| ||||||||| | |||||||||||||||||||||||    
T  46354263 tgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttacca 46354169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 28078189 - 28078286
Alignment:
Q  208 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 304  Q
    |||||||| ||||||| ||||  |||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||    
T  28078189 accatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 42805568 - 42805499
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  42805568 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 42805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 18327089 - 18327009
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||| |||||||||    ||||||||||||||||||||||    
T  18327089 gccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttacca 18327009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 11617645 - 11617748
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||||  |||||| |||||||||||  ||||||||||  ||||||||||||||||||    
T  11617645 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttt 11617744  T
Q  306 acca 309  Q
    ||||    
T  11617745 acca 11617748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 29907463 - 29907393
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatg--acaacaactttacc 308  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||  |||||||  ||||||||||||||    
T  29907463 tttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 42391157 - 42391251
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 302  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  42391157 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 35334916 - 35334974
Alignment:
Q  251 gagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  35334916 gagactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttacca 35334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 42476949 - 42476848
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || |||||||  |||||| ||||||||||||||||| || |||||||  ||||||||||   |||||||||||||||||||    
T  42476949 accatttggtgtattgtacgcagccttaccttgtttt-acacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaacttta 42476851  T
Q  307 cca 309  Q
    |||    
T  42476850 cca 42476848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 7193127 - 7193062
Alignment:
Q  242 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 19265892 - 19265791
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||||||| || |||||||||||| | |||| || | ||||||||| |||||||||||  |||| ||||||||||||||    
T  19265892 accatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaacttta 19265793  T
Q  307 cc 308  Q
    ||    
T  19265792 cc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 22699061 - 22699130
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||| |||| ||||||||||| | | |||||||  ||||||||||||||||||||||    
T  22699061 tttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttacca 22699130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 3469270 - 3469338
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||||||| ||||||||||||||||    ||||||||||  |||||||||||||||||||||    
T  3469270 tttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 6736967 - 6736867
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| |||||||||||| | |||||  |||||||| |||||||  |||||  ||||||||||| |||||||||||  || ||||||||||||||||    
T  6736967 accatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaacttta 6736868  T
Q  307 c 307  Q
    |    
T  6736867 c 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 16341322 - 16341254
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||| |  |||||| ||||||||||||    
T  16341322 tttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 28362236 - 28362304
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||| | |||||||||||||||||  ||||||||||   ||||||||||||||||||||    
T  28362236 tttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 48735179 - 48735281
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttcta-ggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || |||||||  |||||| |||||||||  |||||| | |||||||||| |||||||||||  ||||||||||||||||||    
T  48735179 accatttggtgtattgtacgcagccttaccgtgtttt-acacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaacttt 48735277  T
Q  306 acca 309  Q
    ||||    
T  48735278 acca 48735281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 15108457 - 15108527
Alignment:
Q  211 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgac 280  Q
    |||||||||||||||  | |||||||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  15108457 atttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 31591166 - 31591243
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||||  ||||||||| || ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||    
T  31591166 accatttattgtattgtacgcagccttactctgtttt-acacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 47716528 - 47716438
Alignment:
Q  217 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||| ||||||||||    
T  47716528 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 48123541 - 48123643
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| |||||||||||| |  |||| ||||| |||||||||||| ||||||| ||||||||||| | |||||||||   ||||||| |||||||||    
T  48123541 accatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaacttt 48123640  T
Q  306 acc 308  Q
    |||    
T  48123641 acc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 7645000 - 7644931
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| | ||||||| |||||||    
T  7645000 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 7794597 - 7794666
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||| |  |||||| |||||||||||||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttacca 7794666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 13805145 - 13805077
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||| |||| || |||| ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  13805145 ttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 5180238 - 5180317
Alignment:
Q  231 cttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||| |||||||| ||||||||| ||||||| || | |||||| | |||||||||  ||||||||||||||||||||||    
T  5180238 cttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttacca 5180317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 22065654 - 22065563
Alignment:
Q  219 tattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||||||| || |||| || ||||||||||||||  |||||| |  |||||||||| |||| |||| ||||| |||||||||||||||||    
T  22065654 tattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 38262287 - 38262330
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctt 283  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  38262287 tttttacacaagagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 23419731 - 23419833
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| || ||||||||  |||||||||   |||||||||| |||||||    
T  23419731 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaacttt 23419830  T
Q  306 acc 308  Q
    |||    
T  23419831 acc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 35203483 - 35203433
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatca 290  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  35203483 tttttacacaagagaatgtttccaggacttgaacccgtgacctttcaatca 35203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 44123710 - 44123780
Alignment:
Q  238 tgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||||||||||| ||||||| || |||||||| ||| | |||||  |||||||||| ||||||||||    
T  44123710 tgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 1424001 - 1424070
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||| |||||||||| |||| |||||  ||||||||| |  |||||| |||||||||||||||    
T  1424001 tttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttacca 1424070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 7879716 - 7879639
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt 283  Q
    |||||||| ||||||||| || |||||||  ||||||| |||||||||| |||||| ||||||||||| |||||||||    
T  7879716 accatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 14099097 - 14099165
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14099097 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 14409114 - 14409182
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14409114 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 32233214 - 32233270
Alignment:
Q  229 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||| | |||||||||    
T  32233214 gccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 38604609 - 38604550
Alignment:
Q  203 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttc 261  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| |||||||    
T  38604609 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 11741871 - 11741774
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||||||||| || ||||||| || |||| |||| |||  ||||||  ||||||||||| | |||||||||  ||||||||||||||||||    
T  11741871 accatttggtgtattgtacgcagccttaccctatttt-acactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 14732928 - 14732982
Alignment:
Q  255 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||| ||||||||||| | |||| ||||  ||||||||||||||||||||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttacca 14732982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 18512510 - 18512588
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||| | ||||||||| || ||||||| || |||||||||||||   |||||| ||||||||||| |||||||||||    
T  18512510 accattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 8491963 - 8491918
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8491963 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8491918  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 8518772 - 8518727
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 285  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8518772 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8518727  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 12473359 - 12473280
Alignment:
Q  230 ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc-gatcacatgacaacaactttacc 308  Q
    |||||| |||||||| |||||||||  |||||  ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  12473359 ccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagat-acatgacaacaactttacc 12473280  T

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Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 42101976 - 42102044
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||||  ||||| ||||||| ||||||||||||  ||||||| |  |||| ||||||||||||||||    
T  42101976 tttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

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Target: scaffold0187 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 10110 - 10208
Alignment:
Q  211 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  10110 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10208  T

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Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 20438 - 20536
Alignment:
Q  211 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20438 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20536  T

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Target: scaffold0168 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 30655 - 30554
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || ||| ||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  30655 accatttggtgtattgtacgcagccctaccctgtttt-acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 30557  T
Q  307 cca 309  Q
    |||    
T  30556 cca 30554  T

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Target: scaffold0258 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 13081 - 13182
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||| | ||||||||| || |||||||  ||||||||| |||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  13081 accattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 13180  T
Q  307 cc 308  Q
    ||    
T  13181 cc 13182  T

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Target: scaffold1176 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 1646 - 1752
Alignment:
Q  210 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 308  Q
    |||||| |||||||||||| ||||||  ||||||| |||||||||  |||||  ||||||||||| | |||||||||  |||||||||||||||||||||    
T  1646 catttggtgtattgtatgcagccttatcctgtttt-acacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T
Q  309 aagtgcgt 316  Q
    || |||||    
T  1745 aattgcgt 1752  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 11207 - 11107
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 306  Q
    |||||||| ||||||||| || |||||||| |||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||| | ||||||||||    
T  11207 accatttggtgtattgtaagcagccttactttgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaacttta 11110  T
Q  307 cca 309  Q
    |||    
T  11109 cca 11107  T

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Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 4200 - 4134
Alignment:
Q  241 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 59021 - 58952
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| || |||||||    
T  59021 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacca 58952  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 46875 - 46800
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaagtgcg 315  Q
    ||||||||||||||  |||||| || |||||||| |||||||||    ||||||||||||||||||||||| ||||    
T  46875 tttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcg 46800  T

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Target: scaffold0057; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 46997 - 47041
Alignment:
Q  263 aggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  46997 aggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 24829 - 24927
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 305  Q
    |||||||| ||| ||||| || ||||||| |||||||| ||||||||| |||||     ||||||||| | |||||||||  ||||||||||||||||||    
T  24829 accatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaacttt 24923  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 35074 - 35167
Alignment:
Q  208 accatttgatgtattgtatgc-gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 298  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||  ||||||||||||  ||||||||||| ||||||||| |  |||||||||||    
T  35074 accatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaa 35167  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 8938 - 8866
Alignment:
Q  237 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||||   |||||| |||| ||||||  |||||||| |  ||||||||||||||||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacca 8866  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 72923 - 72999
Alignment:
Q  207 taccatttgatgtattgtatgc-gccttactctgttttt-acacaagagact-gtttctaggacttgaactcgtgac 280  Q
    ||||||||| ||||||||| || |||||||  ||||||| |||||||||||| ||||||||||||||||| ||||||    
T  72923 taccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac 72999  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 83903 - 83852
Alignment:
Q  256 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 307  Q
    |||||| | ||||||||| |||||||||||  ||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 10854 - 10785
Alignment:
Q  240 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 309  Q
    ||||||||||||||  |||||  ||  ||||||| ||||||||| |  ||||||||||||||||||||||    
T  10854 tttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttacca 10785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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