View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21306_low_6 (Length: 317)
Name: NF21306_low_6
Description: NF21306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21306_low_6 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 4571369 - 4571068
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571369 |
aaatttcagatagaggcctaattgctggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
4571270 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571269 |
aacgaccgaaagcatatctactggagttccaatgttgtgttagccattttttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
4571170 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571169 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataa |
4571070 |
T |
|
| Q |
301 |
tg |
302 |
Q |
| |
|
|| |
|
|
| T |
4571069 |
tg |
4571068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 4557522 - 4557222
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||| |||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
4557522 |
aaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactc |
4557423 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
4557422 |
aaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactgcagatatatttgcaatacatgggagatt |
4557323 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataa |
300 |
Q |
| |
|
|| || ||||| || || |||||||||||| ||||||| ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||| |||| |
|
|
| T |
4557322 |
ggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattgatggagggggagaaaggaaagaagatgtggaaaaagataa |
4557223 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
4557222 |
t |
4557222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4586033 - 4585739
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4586033 |
aaatttcagatagaggcctaatcgcgggttggtgcccgcaagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactc |
4585934 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||| |||||||||| |
|
|
| T |
4585933 |
aaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaaactgtagaattatttgcaatgaatgggagatt |
4585834 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||| | || || |||||||||||| | ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
4585833 |
gggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaatgaattgatggtgggagagaatggaaagaagatgaggcaaaa |
4585739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 4622539 - 4622251
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||||||| |||||||||||| | |||||||| | |||||| ||||| | ||||| ||| |||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
4622539 |
aaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattc |
4622440 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| ||||||||||||| | |||||||| ||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4622439 |
aaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatatctgcaattcatgggagatt |
4622340 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgag |
289 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| | |||||| |||| || |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4622339 |
ggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctgatcaatgaattgatgtcgggagataaaggaaagaagatgag |
4622251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4579829 - 4579535
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | | ||||| |||||||| ||||| ||||||| |||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
4579829 |
aaatttcagatagaggcctaataacgagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactc |
4579730 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
|| || |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||| || ||| |||||| | |||||||||||| | ||| |
|
|
| T |
4579729 |
aatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcgctgatcacccagtaagctgcagatatttatgcaatacatggaaaatt |
4579630 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||||| |||||||| ||||||||||||||| | ||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||| |||| |
|
|
| T |
4579629 |
ggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaatgaattgatggtgggagagaaagcaaagaagatgaggcaaaa |
4579535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4461520 - 4461226
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | | ||||| |||||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
4461520 |
aaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattc |
4461421 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| | |||||||||| |
|
|
| T |
4461420 |
aaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttggtgatcagccagcaaactgtagatttatttgcaacaaatgggagatt |
4461321 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||| | |||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||||||| |||| |
|
|
| T |
4461320 |
ggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaacgaattgatggttggagagattggaaagaagatgaggcaaaa |
4461226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4613453 - 4613747
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | | | ||||| | |||||| ||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| |
|
|
| T |
4613453 |
aaatttcagatagaggcctaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactc |
4613552 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| |||||||||||||||||||| || || ||||||||||||||||| |||||||| |||||| |||||| ||| |
|
|
| T |
4613553 |
aaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaactgcagatatatatgcaatgaatgggaaatt |
4613652 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||| || || |||||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||| |||| |
|
|
| T |
4613653 |
gggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaatgaattgatggtgggagagaaaggaaagaaaatgaggcaaaa |
4613747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4574705 - 4574411
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||| | |||||||||||||||||||| | |||| | ||||| ||||||||||| || ||||||||||| |
|
|
| T |
4574705 |
aaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactc |
4574606 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | |||||||||||||||| ||||||||||| ||| | ||||||||||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
4574605 |
aaccactgaaagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagatt |
4574506 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||| ||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4574505 |
ggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaa |
4574411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 4564108 - 4563822
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| | || ||||||||||||||||| ||||||||||| || ||||||||||| || ||||||||||| |
|
|
| T |
4564108 |
aaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactc |
4564009 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| | |||| |||||||||| |
|
|
| T |
4564008 |
aaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggagatt |
4563909 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatg |
287 |
Q |
| |
|
|| || ||||||||||| ||||| |||||| | ||||||||||| | ||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
4563908 |
gggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatgaattgatgtcaggagagaaaggaaagaagatg |
4563822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4592628 - 4592334
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||||||||||||||| |||| | | | ||||| | |||||| ||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
4592628 |
aaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactc |
4592529 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| |||| | ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||| ||| | |||| |||||||||| |
|
|
| T |
4592528 |
aaccactgaaagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagatt |
4592429 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||| ||||| ||||| |||||| | ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4592428 |
gggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaa |
4592334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 2 - 295
Target Start/End: Complemental strand, 4470199 - 4469906
Alignment:
| Q |
2 |
aatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactca |
101 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| | |||||| ||||| ||||||| |||||||| ||||| ||||||||||| || |||||||||||| |
|
|
| T |
4470199 |
aatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactca |
4470100 |
T |
|
| Q |
102 |
acgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattg |
201 |
Q |
| |
|
|| || |||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||| ||| |||||| ||||||||||| |
|
|
| T |
4470099 |
accactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggagattg |
4470000 |
T |
|
| Q |
202 |
gaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| | |||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||| ||||| || ||||||||||||||| |||| |
|
|
| T |
4469999 |
gacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaatgaattgatggttggagagaatggaaagaagatgagggaaaa |
4469906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 4266901 - 4267180
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||| | ||||| ||||| |||||||| ||||| |||||||| ||||||||||| || |||||||| || |
|
|
| T |
4266901 |
aaatttcagatagaggactaatagcaagttggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattc |
4267000 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||| || |||||||||| |
|
|
| T |
4267001 |
aaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatgggagatt |
4267100 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaa |
280 |
Q |
| |
|
||| |||||||| |||| |||||||||||| |||| || ||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
4267101 |
ggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaaaggaaa |
4267180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4560903 - 4560609
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||| | |||||||||||||||||||| || ||| | ||||| ||||||||||| || ||||||||||| |
|
|
| T |
4560903 |
aaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaactc |
4560804 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| |||| ||||| |
|
|
| T |
4560803 |
aaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatggaagatt |
4560704 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||| |||||| ||||| ||||| ||||| | || |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4560703 |
ggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgaggcaaaa |
4560609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4626348 - 4626054
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
4626348 |
aaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactc |
4626249 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| | |||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||| |||||| |||||||||| |
|
|
| T |
4626248 |
aaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatgggagatt |
4626149 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||||| ||||||||| ||||||||||||| | | ||| ||||| || |||||| |||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
4626148 |
ggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatgcattgatggcaggagataacggaaagaagatgaggcaaaa |
4626054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 295
Target Start/End: Original strand, 4256349 - 4256641
Alignment:
| Q |
4 |
tttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaac |
103 |
Q |
| |
|
|||| |||||||| ||||| | | ||||||| |||||||| ||||| ||||||| ||||| ||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
4256349 |
tttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaac |
4256448 |
T |
|
| Q |
104 |
gaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcag-ccagcaaactgtagatatatctgcaatacatgggagattgg |
202 |
Q |
| |
|
| |||||||| | | | |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||| || | |||||||||||| |
|
|
| T |
4256449 |
cattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatgggagattgg |
4256548 |
T |
|
| Q |
203 |
aatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||| |||||| ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| |||||||||||||||||| |||| |
|
|
| T |
4256549 |
aattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattgatgtcgggagaaaaaggaaagaagatgaggcaaaa |
4256641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 4481090 - 4480803
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||| ||||||||||||| | ||||||| | ||||||||||| |||||||| |||||||| || || ||||||||||| || ||||||||||| |
|
|
| T |
4481090 |
aaatttcaaatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactc |
4480991 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| ||| | ||||||| |||||||||||||||||||||||||| ||||||||| | ||| ||||| ||| |||||| |||||||||| |
|
|
| T |
4480990 |
aaccactgaaagtgtatgtgctggagtgccaatgttgtgttggccattctttgccgatcagccacctaaccgtagaattatttgcaatgaatgggagatt |
4480891 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatga |
288 |
Q |
| |
|
||| ||||||||||||| |||||||||||| | || ||||||| || ||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
4480890 |
ggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatcaatgaattgttggtgggagagaaaggaaagaagatga |
4480803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4514856 - 4515150
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||| |||||||||||||||| | ||||||| | ||||||||||| |||||||| ||||||||||| || ||||||||||| || ||||||||||| |
|
|
| T |
4514856 |
aaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactc |
4514955 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || || ||||||| ||||||| |||||| | ||||||| |||||||| |||||| ||| |||||||||||| ||| |||||| |||||||||| |
|
|
| T |
4514956 |
aaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatgggagatt |
4515055 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| ||||||||||||| |||||||||||| | ||||| || || | ||||||||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
4515056 |
gggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaattgatggtgggagagaaaggaaataaaatgaggaaaaa |
4515150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 37 - 295
Target Start/End: Complemental strand, 4516682 - 4516424
Alignment:
| Q |
37 |
cgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgtt |
136 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||| || ||||||||||| |||||||||||||| || | |||||||| | | | ||||| |||||||| |
|
|
| T |
4516682 |
cgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgtt |
4516583 |
T |
|
| Q |
137 |
gtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgag |
236 |
Q |
| |
|
||||||||| || |||||||| |||||| |||| || |||||||| |||||| ||||||||||||| ||||| ||||| |||||||||||| | ||| |
|
|
| T |
4516582 |
gtgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggag |
4516483 |
T |
|
| Q |
237 |
gtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4516482 |
gtggagaagctgatcaatgaattaatggtgggagataaaggaaagaagatgaggcaaaa |
4516424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4598568 - 4598274
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||||||||||||||| || ||| | ||||| ||||||| ||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||| |
|
|
| T |
4598568 |
aaatttcagatagaggcttagttgcaagctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactc |
4598469 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| |||| | | ||||| |||||||||||||| || || || || ||||||| ||| ||||| |||||||| |||||| |||||||||| |
|
|
| T |
4598468 |
aaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactgcagatatatttgcaatgaatgggagatt |
4598369 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||||| |||| || ||||||||||||||| | ||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||| |||| |
|
|
| T |
4598368 |
ggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatgaggcaaaa |
4598274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4602186 - 4601892
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| | ||||||||||| |||||||| ||||| || || || ||||||||||| |||||||||||||| |
|
|
| T |
4602186 |
aaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactc |
4602087 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| || |||||||||||||| || ||||| ||||||||| |||||||||||| ||| || ||| |||||||||| |
|
|
| T |
4602086 |
aaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagatt |
4601987 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||||||||| |||||||||||| | ||| ||| ||| || |||||||| |||| | ||||||||||| |||||||||||| |||| |
|
|
| T |
4601986 |
ggtatggaaatcgatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgaggcaaaa |
4601892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 39 - 277
Target Start/End: Complemental strand, 4457953 - 4457715
Alignment:
| Q |
39 |
caagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgt |
138 |
Q |
| |
|
||||| ||||| |||||||| |||||||| || || ||||||||||| |||||||| |||||||| || |||||||||| ||||||| |||||| || |
|
|
| T |
4457953 |
caagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgc |
4457854 |
T |
|
| Q |
139 |
gttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggt |
238 |
Q |
| |
|
||||||||||||||| |||| ||||| ||| ||||||| ||| |||||| ||| |||||||| || ||||||||||| |||||||||||| ||||||| |
|
|
| T |
4457853 |
gttggccattctttggtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtgaagagagatgaggt |
4457754 |
T |
|
| Q |
239 |
ggagaatttggtcaatgaattgatggtgggagataaagg |
277 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
4457753 |
ggagaagttagtcaatgaattgatggtgggagaaaaagg |
4457715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4506254 - 4505960
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||| |||| || | | ||||| || ||||||||||| || || || |||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
4506254 |
aaatttcagatagaagccttatagcaagctggtgttcacaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactc |
4506155 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| ||||||| |||||| |||||||||| ||||||| |||||| ||| |||||||||||| ||| |||||| || ||||||| |
|
|
| T |
4506154 |
aaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggagatt |
4506055 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||||||||||| |||||||||||||| ||| | | || ||||| ||||| ||||| | ||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
4506054 |
ggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatgaaattatggttggagagaaaggaaacaagatgaggaaaaa |
4505960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 3172138 - 3171849
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
3172138 |
aaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactc |
3172039 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| ||| | ||||| | |||||||||||| ||||||| ||||||||||| ||| | ||| ||||| ||| ||| | |||| ||||| |
|
|
| T |
3172038 |
aaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatcaaccacctaacagtagaattatttgccaagaatggaagatt |
3171939 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgagg |
290 |
Q |
| |
|
|| || ||||| ||||| ||||| |||||| ||||| ||||| || |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3171938 |
gggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgagg |
3171849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4259889 - 4260183
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||||| |||||||||||||| | | | ||||| |||||||| ||||| ||||||| ||||| ||||||| ||||| ||||| || ||||||||||| |
|
|
| T |
4259889 |
aaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactc |
4259988 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| | |||||||| | | | | |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| || || |||||||||| |
|
|
| T |
4259989 |
aaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaacgaatgggagatt |
4260088 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||||| ||||| ||||||||||||| ||| ||||||||| ||| || |||||||| | ||| ||||| ||||||||||||||||| |||| |
|
|
| T |
4260089 |
ggaattgaaattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatgaaattatgtcaggagaagaaggaaagaagatgaggcaaaa |
4260183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4490090 - 4490384
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||| | |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
4490090 |
aaatttcagatagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactc |
4490189 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
|| | || || |||| | ||||||| |||||||||||||||||||| ||||||||||| ||| | | ||||| ||| ||| | |||||||||| |
|
|
| T |
4490190 |
aatcatggagagtatatgtgctggagtgccaatgttgtgttggccattttttgctgatcaaccacttagcagtagaattatttgcgaagaatgggagatt |
4490289 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || |||| ||||| ||||| |||||| | ||||| ||||| || |||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
4490290 |
gggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgaggcaaaa |
4490384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 291
Target Start/End: Complemental strand, 4493346 - 4493062
Alignment:
| Q |
7 |
cagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgac |
106 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||| | ||||||| | ||| |||||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
107 |
cgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatc |
206 |
Q |
| |
|
| ||| ||||| | | ||||| ||||||||||||||||| |||||| |||||||||| |||||||||||| || |||||| || |||||||||| | |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattggagta |
4493147 |
T |
|
| Q |
207 |
gaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgagga |
291 |
Q |
| |
|
|||||||||| ||||| || ||| | | ||||||||| |||||||||| | ||||| ||||| |||||||| |||||||||| |
|
|
| T |
4493146 |
gaaatcgataggaatgttaatagagaaaatgtggagaatctggtcaatgagattatggttggagagaaaggaaacaagatgagga |
4493062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 4617419 - 4617132
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
||||| |||||||||||||||| | ||||||| | ||||| ||||| |||||||| |||||||| || || ||||||||||| || |||||||| || |
|
|
| T |
4617419 |
aaattgcagatagaggcctaatagcaagttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattc |
4617320 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| |||| ||||||| |||||||||||||||||||| ||||| || |||||| || ||||||||| ||| || ||| |||||||||| |
|
|
| T |
4617319 |
aaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggagatt |
4617220 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatga |
288 |
Q |
| |
|
|| || ||||||||||| |||||||||||| | ||| ||| || || |||||||| |||| | ||||||||||||||||| |||| |
|
|
| T |
4617219 |
ggtatggaaatcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatga |
4617132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 295
Target Start/End: Complemental strand, 4568417 - 4568159
Alignment:
| Q |
37 |
cgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgtt |
136 |
Q |
| |
|
|||||||| |||| |||||||| |||||| |||| | ||||||||||| |||||||||||||| || |||||||| | | | |||| |||||||| |
|
|
| T |
4568417 |
cgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgtt |
4568318 |
T |
|
| Q |
137 |
gtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgag |
236 |
Q |
| |
|
|||||||| || ||| |||| |||||| || |||| |||||||| || |||| | |||||| ||||||||||| ||||| |||||||||||| | ||| |
|
|
| T |
4568317 |
atgttggccttttttttctgagcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgtgaagagagaggag |
4568218 |
T |
|
| Q |
237 |
gtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||||||| || | |||||||| ||||||||| | |||||||| ||||||||| |||| |
|
|
| T |
4568217 |
gtggagaagctgatgaatgaattaatggtgggacagaaaggaaaaaagatgaggcaaaa |
4568159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 4504170 - 4504295
Alignment:
| Q |
39 |
caagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgt |
138 |
Q |
| |
|
||||| ||||| |||||||| |||||||| || || ||||||||||| ||||||||||||||||| || ||||| | | | ||||||| |||||||||| |
|
|
| T |
4504170 |
caagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgt |
4504269 |
T |
|
| Q |
139 |
gttggccattctttgctgatcagcca |
164 |
Q |
| |
|
|||||||||| ||| ||||||||||| |
|
|
| T |
4504270 |
gttggccatttttttctgatcagcca |
4504295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 4299671 - 4299769
Alignment:
| Q |
191 |
atgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgag |
289 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||| | |||||||| || || |||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
4299671 |
atgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatgag |
4299769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 4299601 - 4299672
Alignment:
| Q |
46 |
aagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatat |
117 |
Q |
| |
|
||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
4299601 |
aagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatat |
4299672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 4504383 - 4504426
Alignment:
| Q |
252 |
aatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
4504383 |
aatgaattgatggtgggagagaaaggaaagaagatgaggcaaaa |
4504426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 16686002 - 16686302
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||| ||||||||| ||||||| | | | |||||| |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||| |
|
|
| T |
16686002 |
aaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactc |
16686101 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || ||||| |||| | |||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||| |||||||||| |
|
|
| T |
16686102 |
aaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaaatgcagatatatttgcaatgaatgggagatt |
16686201 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataa |
300 |
Q |
| |
|
|| || ||||| || || |||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
16686202 |
ggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaagataa |
16686301 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
16686302 |
t |
16686302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 20863578 - 20863872
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | | ||||||| | |||||||| || ||||||||||||||||||||||| || | ||||| |||||||||||||| |
|
|
| T |
20863578 |
aaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaactc |
20863677 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| | || ||||||| | ||||||| ||||||||||| |||||||| |||||||||||||| ||||||| ||||| || ||||| | |||||||||| |
|
|
| T |
20863678 |
aaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactgcagatacatttgcaacaaatgggagatt |
20863777 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| |||||||| || || ||||| |||||| | |||||||||| |||| |||||||||||||||||||| ||||||| || ||||||| |||| |
|
|
| T |
20863778 |
gggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgatggtgggagagaaaggaaggaggatgaggcaaaa |
20863872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 1674623 - 1674329
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||| | ||||||||||| |||||||| |||||||| || || |||||||| ||||| ||||||||||| |
|
|
| T |
1674623 |
aaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactc |
1674524 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||| || ||| |||| ||||| |
|
|
| T |
1674523 |
aaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagatt |
1674424 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||| ||||| |||||||||||| | | ||||||| | |||||||||||||||||||||| || ||||| ||||||||| |||| |
|
|
| T |
1674423 |
ggtatggaaattgatacgaatgtgaagagagagggtttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaa |
1674329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 3086817 - 3086522
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||| ||||| | | ||||| |||||||| |||||||||| || |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
3086817 |
aaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactc |
3086718 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
|||| |||||| || | ||||||| |||||||||||||||||||| | || ||||| ||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
3086717 |
aacggttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggagatcaaccaataaactgtagatatatctgcaatatatgggagatt |
3086618 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaat |
296 |
Q |
| |
|
||||| |||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3086617 |
ggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtgggagataaaggaaagaagatgaggcaaaat |
3086522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 24103393 - 24103109
Alignment:
| Q |
4 |
tttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaac |
103 |
Q |
| |
|
||||||||||||| ||||| | ||||||| | ||||| ||||| || ||||| ||||| |||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
24103393 |
tttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaac |
24103294 |
T |
|
| Q |
104 |
gaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattgga |
203 |
Q |
| |
|
|| |||||||||| | ||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||| ||| ||| || ||||||||||||| |
|
|
| T |
24103293 |
cactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatgggagattgga |
24103194 |
T |
|
| Q |
204 |
atcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatga |
288 |
Q |
| |
|
||||||||||||| |||||||||||| |||| || ||||| || ||||||||||||||||||||||| || ||||||| ||||| |
|
|
| T |
24103193 |
ctcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaacggaaagacgatga |
24103109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 27999834 - 28000128
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||| | ||||||||||| |||||||| |||||||| | || |||||||||||||| ||||||||||| |
|
|
| T |
27999834 |
aaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactc |
27999933 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| ||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||| ||| || ||| |||| ||||| |
|
|
| T |
27999934 |
aaccaccgaaagcatatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagatt |
28000033 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||| |||| |||||||||| | | || ||||||| | |||||||||||||||||||||| || ||||| ||||||||| |||| |
|
|
| T |
28000034 |
ggtatggaaattgatatgaatgtgaagatagaggatttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaa |
28000128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 3454 - 3748
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||| | |||||| ||||| ||| ||| |||||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
3454 |
aaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattc |
3553 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| ||||||| |||||| | |||||||||||||||| |||||||||| |||||||||||| ||| ||||| |||||||||| |
|
|
| T |
3554 |
aaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacgaatgggagatt |
3653 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
||| | |||||||||| ||||||||||| ||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||| |||| |
|
|
| T |
3654 |
ggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatgaattgacggtgggagagaaaggaaagaagatgaggcaaaa |
3748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 1281511 - 1281223
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| | ||||||||||| |||||||| |||||||| ||||| ||||||||||| || ||||||||||| |
|
|
| T |
1281511 |
aaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactc |
1281412 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| || |||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||| ||| || ||| |||| ||||| |
|
|
| T |
1281411 |
aaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagatt |
1281312 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgag |
289 |
Q |
| |
|
|| || ||||||||||| |||||||||||| | ||||||| || ||| ||||||||||||| | || ||| |||||||||| ||||| |
|
|
| T |
1281311 |
ggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaatgaattgatagccggggatgaaggaaagaatatgag |
1281223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4421 - 4715
Alignment:
| Q |
1 |
aaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactc |
100 |
Q |
| |
|
|||||||||||||||||||||||| | | ||||| | |||||| ||||| ||||||| |||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
4421 |
aaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactc |
4520 |
T |
|
| Q |
101 |
aacgaccgaaagcatatctactggagttccaatgttgtgttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagatt |
200 |
Q |
| |
|
||| | |||||||||| | ||||| |||||||||||||||||||| || || ||||||||| |||||| | | ||||||| | ||| |||||||| | |
|
|
| T |
4521 |
aaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaaactatcggtatatctcccatatatgggagact |
4620 |
T |
|
| Q |
201 |
ggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
295 |
Q |
| |
|
|| || ||||| |||||||||||||||||| | |||| |||| || |||||||||||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
4621 |
ggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcgggagataaaggaatgaagatgaggcaaaa |
4715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 3459 - 3662
Alignment:
| Q |
40 |
aagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtg |
139 |
Q |
| |
|
||||| |||| |||||||| |||| | ||||||| ||||| ||||| ||||||||||||||||| | |||||||| | | |||||||||||||| || | |
|
|
| T |
3459 |
aagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctggagttccaatgctgcg |
3557 |
T |
|
| Q |
140 |
ttggccattctttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtg |
239 |
Q |
| |
|
||||||||| || | || || || |||||||||||| || || ||| |||||||||||||| ||||| ||| | |||||||||||| | |||||| |
|
|
| T |
3558 |
ttggccatttttccccgaacactcaacaaactgtagatgcatttggaatgaatgggagattggaagtgaaatagattccaatgtgaagagagaggaggtg |
3657 |
T |
|
| Q |
240 |
gagaa |
244 |
Q |
| |
|
||||| |
|
|
| T |
3658 |
gagaa |
3662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University