View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2130_low_8 (Length: 249)

Name: NF2130_low_8
Description: NF2130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2130_low_8
NF2130_low_8
[»] chr1 (34 HSPs)
chr1 (11-231)||(28991322-28991542)
chr1 (1-225)||(13804062-13804286)
chr1 (1-222)||(21497088-21497312)
chr1 (9-231)||(13451999-13452222)
chr1 (1-231)||(2385138-2385367)
chr1 (11-231)||(41744718-41744939)
chr1 (11-231)||(32135325-32135547)
chr1 (15-197)||(3431621-3431804)
chr1 (1-221)||(31541135-31541356)
chr1 (1-221)||(31549704-31549925)
chr1 (1-231)||(23355617-23355853)
chr1 (11-159)||(13477078-13477226)
chr1 (9-231)||(28459743-28459968)
chr1 (1-197)||(43456044-43456242)
chr1 (9-186)||(51055327-51055503)
chr1 (9-159)||(8241078-8241229)
chr1 (22-222)||(31553334-31553533)
chr1 (22-222)||(31562468-31562667)
chr1 (13-215)||(21054863-21055064)
chr1 (22-222)||(22472532-22472730)
chr1 (9-222)||(16135095-16135307)
chr1 (1-103)||(22479724-22479827)
chr1 (9-222)||(20502091-20502304)
chr1 (9-103)||(52101236-52101331)
chr1 (9-222)||(3350741-3350953)
chr1 (11-96)||(23952221-23952306)
chr1 (11-103)||(32608685-32608778)
chr1 (22-103)||(34336843-34336924)
chr1 (22-103)||(38123654-38123734)
chr1 (15-107)||(36848721-36848813)
chr1 (9-103)||(12464260-12464354)
chr1 (141-197)||(11950321-11950378)
chr1 (22-222)||(18702433-18702630)
chr1 (49-128)||(4282763-4282840)
[»] chr4 (32 HSPs)
chr4 (11-231)||(773117-773337)
chr4 (11-231)||(10640314-10640534)
chr4 (11-231)||(8092952-8093173)
chr4 (11-230)||(12998500-12998719)
chr4 (11-231)||(8101757-8101978)
chr4 (20-225)||(27341737-27341943)
chr4 (7-186)||(52297702-52297881)
chr4 (11-231)||(21530322-21530546)
chr4 (11-231)||(1875560-1875785)
chr4 (11-231)||(1889675-1889900)
chr4 (11-221)||(12425432-12425644)
chr4 (11-129)||(20865875-20865993)
chr4 (15-126)||(4522434-4522545)
chr4 (22-222)||(4747630-4747829)
chr4 (9-225)||(21399035-21399252)
chr4 (9-222)||(55584372-55584585)
chr4 (15-103)||(26210600-26210688)
chr4 (15-103)||(26219360-26219448)
chr4 (22-222)||(34842634-34842832)
chr4 (1-104)||(26034168-26034271)
chr4 (22-222)||(25247385-25247584)
chr4 (22-222)||(19645093-19645291)
chr4 (22-103)||(10786713-10786793)
chr4 (22-222)||(18010017-18010216)
chr4 (22-103)||(19759880-19759960)
chr4 (22-103)||(19774636-19774716)
chr4 (9-103)||(14718712-14718807)
chr4 (22-94)||(21811096-21811167)
chr4 (22-100)||(25652675-25652753)
chr4 (186-231)||(20866021-20866066)
chr4 (9-75)||(14736997-14737064)
chr4 (144-222)||(24924559-24924638)
[»] chr3 (68 HSPs)
chr3 (11-231)||(50826477-50826697)
chr3 (1-231)||(8153335-8153567)
chr3 (1-224)||(8204235-8204459)
chr3 (1-231)||(8196424-8196655)
chr3 (9-231)||(3711711-3711937)
chr3 (11-231)||(50849156-50849381)
chr3 (1-231)||(51922267-51922498)
chr3 (1-231)||(27550851-27551083)
chr3 (11-231)||(18949657-18949879)
chr3 (11-231)||(13507456-13507677)
chr3 (11-197)||(27339075-27339262)
chr3 (11-197)||(4435580-4435767)
chr3 (11-197)||(4456371-4456558)
chr3 (9-222)||(14425756-14425973)
chr3 (11-225)||(18900547-18900765)
chr3 (11-212)||(18890364-18890568)
chr3 (11-197)||(30062844-30063032)
chr3 (1-231)||(17935197-17935424)
chr3 (1-221)||(41016522-41016743)
chr3 (11-221)||(15694546-15694759)
chr3 (11-221)||(15696859-15697072)
chr3 (11-221)||(15711149-15711362)
chr3 (1-231)||(39706967-39707195)
chr3 (1-231)||(16814589-16814818)
chr3 (11-176)||(2256601-2256766)
chr3 (2-197)||(43468278-43468472)
chr3 (1-231)||(17360194-17360426)
chr3 (1-231)||(17364836-17365068)
chr3 (22-222)||(6293743-6293941)
chr3 (22-222)||(1004338-1004538)
chr3 (22-222)||(10720928-10721128)
chr3 (1-197)||(18041059-18041254)
chr3 (9-222)||(18351158-18351373)
chr3 (45-221)||(41007743-41007920)
chr3 (42-222)||(6563730-6563912)
chr3 (42-222)||(6577399-6577581)
chr3 (105-231)||(9183894-9184020)
chr3 (22-221)||(16290823-16291020)
chr3 (9-209)||(2215132-2215331)
chr3 (9-231)||(21185629-21185849)
chr3 (1-100)||(17630358-17630457)
chr3 (22-222)||(13274828-13275028)
chr3 (84-219)||(27957882-27958018)
chr3 (9-103)||(11918413-11918508)
chr3 (9-103)||(11932983-11933078)
chr3 (9-222)||(31278608-31278820)
chr3 (35-231)||(27958025-27958216)
chr3 (11-103)||(5144480-5144573)
chr3 (22-103)||(1480127-1480207)
chr3 (22-222)||(27978714-27978913)
chr3 (22-222)||(17562918-17563118)
chr3 (1-103)||(13847874-13847977)
chr3 (22-103)||(30102160-30102242)
chr3 (9-103)||(7063836-7063931)
chr3 (22-101)||(15675298-15675376)
chr3 (22-101)||(15683840-15683918)
chr3 (22-103)||(4503586-4503666)
chr3 (39-103)||(25264847-25264911)
chr3 (39-103)||(25274341-25274405)
chr3 (9-104)||(27880426-27880521)
chr3 (9-104)||(27884821-27884916)
chr3 (9-103)||(17616689-17616783)
chr3 (22-103)||(22951943-22952023)
chr3 (22-103)||(22965917-22965997)
chr3 (9-103)||(7096683-7096778)
chr3 (1-81)||(27957379-27957459)
chr3 (9-77)||(9567487-9567554)
chr3 (22-222)||(24216213-24216401)
[»] chr6 (43 HSPs)
chr6 (11-231)||(20530715-20530936)
chr6 (11-231)||(5487139-5487359)
chr6 (1-231)||(33300049-33300278)
chr6 (11-231)||(14475512-14475734)
chr6 (11-231)||(30823197-30823418)
chr6 (11-230)||(5996584-5996803)
chr6 (11-230)||(23927514-23927735)
chr6 (9-197)||(15389430-15389619)
chr6 (11-228)||(25713675-25713896)
chr6 (1-231)||(27537341-27537569)
chr6 (1-231)||(27551550-27551778)
chr6 (40-231)||(25692937-25693131)
chr6 (40-231)||(25699578-25699772)
chr6 (11-231)||(19826597-19826815)
chr6 (1-221)||(35090345-35090566)
chr6 (1-231)||(13491956-13492187)
chr6 (22-222)||(27047277-27047477)
chr6 (22-222)||(27057521-27057721)
chr6 (11-231)||(13827683-13827905)
chr6 (11-168)||(25993570-25993728)
chr6 (15-187)||(25552386-25552557)
chr6 (9-222)||(16302982-16303196)
chr6 (11-222)||(16588951-16589161)
chr6 (11-222)||(16606219-16606429)
chr6 (9-222)||(25653920-25654132)
chr6 (9-230)||(12451533-12451755)
chr6 (22-222)||(21358645-21358844)
chr6 (22-222)||(23962627-23962826)
chr6 (22-222)||(23982737-23982936)
chr6 (9-197)||(21708582-21708768)
chr6 (10-222)||(24485460-24485672)
chr6 (15-103)||(16635467-16635555)
chr6 (15-103)||(16645424-16645512)
chr6 (9-103)||(18205153-18205248)
chr6 (9-103)||(18220152-18220247)
chr6 (9-103)||(24920528-24920623)
chr6 (22-197)||(27960236-27960407)
chr6 (36-103)||(30995569-30995636)
chr6 (22-103)||(18111981-18112061)
chr6 (22-103)||(18126526-18126606)
chr6 (22-101)||(28266570-28266648)
chr6 (22-101)||(28345319-28345397)
chr6 (22-101)||(28304283-28304362)
[»] chr5 (47 HSPs)
chr5 (11-231)||(1726835-1727057)
chr5 (26-230)||(20370777-20370981)
chr5 (26-230)||(20396480-20396684)
chr5 (1-222)||(41093757-41093982)
chr5 (11-197)||(31423722-31423909)
chr5 (9-197)||(43596721-43596911)
chr5 (9-197)||(43629515-43629705)
chr5 (1-221)||(24955500-24955721)
chr5 (1-221)||(24963960-24964181)
chr5 (1-221)||(28845123-28845345)
chr5 (1-221)||(28853733-28853955)
chr5 (11-197)||(31412817-31413003)
chr5 (11-231)||(19225795-19226014)
chr5 (22-222)||(33835358-33835557)
chr5 (22-222)||(20377683-20377884)
chr5 (22-222)||(20386472-20386673)
chr5 (22-222)||(33844057-33844256)
chr5 (9-222)||(23039025-23039237)
chr5 (80-231)||(21931392-21931546)
chr5 (22-222)||(17642395-17642593)
chr5 (9-222)||(21850852-21851064)
chr5 (1-103)||(23348749-23348851)
chr5 (22-222)||(23984670-23984869)
chr5 (9-222)||(31548260-31548472)
chr5 (9-103)||(21857013-21857108)
chr5 (22-103)||(23637375-23637455)
chr5 (22-103)||(23827977-23828057)
chr5 (22-103)||(23835435-23835515)
chr5 (22-103)||(27064117-27064197)
chr5 (25-221)||(26078590-26078783)
chr5 (25-221)||(26088569-26088762)
chr5 (9-103)||(21858766-21858861)
chr5 (9-222)||(26176999-26177212)
chr5 (22-103)||(21986397-21986477)
chr5 (22-103)||(21995045-21995125)
chr5 (22-222)||(36458555-36458753)
chr5 (22-103)||(3476994-3477074)
chr5 (22-103)||(3491764-3491844)
chr5 (39-103)||(11802591-11802655)
chr5 (39-103)||(11812667-11812731)
chr5 (39-103)||(12170373-12170437)
chr5 (39-103)||(12179802-12179866)
chr5 (22-129)||(23762511-23762615)
chr5 (39-103)||(27220387-27220451)
chr5 (39-103)||(27223394-27223458)
chr5 (39-103)||(27232865-27232929)
chr5 (138-222)||(23025833-23025917)
[»] chr2 (54 HSPs)
chr2 (7-231)||(6856170-6856396)
chr2 (1-231)||(24293365-24293595)
chr2 (1-231)||(24286797-24287027)
chr2 (9-231)||(26896743-26896966)
chr2 (1-222)||(42247682-42247906)
chr2 (1-197)||(17685142-17685339)
chr2 (1-231)||(34528053-34528288)
chr2 (1-231)||(34542027-34542262)
chr2 (11-231)||(44374972-44375196)
chr2 (11-231)||(44390553-44390777)
chr2 (11-212)||(35039894-35040096)
chr2 (1-221)||(35139803-35140024)
chr2 (1-221)||(35148144-35148365)
chr2 (1-221)||(41232522-41232743)
chr2 (1-221)||(42564583-42564805)
chr2 (1-221)||(42573207-42573429)
chr2 (20-230)||(25495773-25495982)
chr2 (1-221)||(15951705-15951929)
chr2 (1-221)||(15943195-15943418)
chr2 (11-231)||(26717717-26717936)
chr2 (11-231)||(26731850-26732069)
chr2 (15-197)||(20364749-20364933)
chr2 (9-186)||(20920701-20920877)
chr2 (9-197)||(16274632-16274816)
chr2 (9-197)||(16283808-16283992)
chr2 (22-222)||(34068895-34069095)
chr2 (64-225)||(20623528-20623692)
chr2 (9-222)||(28481175-28481388)
chr2 (11-222)||(30524734-30524943)
chr2 (22-222)||(34685528-34685727)
chr2 (10-231)||(17095633-17095848)
chr2 (22-103)||(21850353-21850434)
chr2 (22-103)||(21858788-21858869)
chr2 (9-222)||(42245376-42245591)
chr2 (9-103)||(10681540-10681635)
chr2 (9-103)||(21151383-21151477)
chr2 (9-103)||(35304648-35304743)
chr2 (22-103)||(34708069-34708149)
chr2 (9-103)||(15600680-15600776)
chr2 (22-222)||(27681155-27681356)
chr2 (9-103)||(31354928-31355023)
chr2 (22-103)||(22187281-22187362)
chr2 (22-222)||(42385950-42386148)
chr2 (22-222)||(42400834-42401032)
chr2 (9-103)||(11622257-11622352)
chr2 (22-103)||(29855291-29855371)
chr2 (11-103)||(33306772-33306864)
chr2 (22-103)||(34437039-34437119)
chr2 (39-222)||(3755129-3755311)
chr2 (39-222)||(3765180-3765362)
chr2 (39-222)||(2652863-2653045)
chr2 (83-227)||(17069159-17069301)
chr2 (83-227)||(17075152-17075294)
chr2 (10-65)||(17069062-17069117)
[»] chr8 (35 HSPs)
chr8 (11-222)||(17529009-17529219)
chr8 (11-222)||(36248683-36248896)
chr8 (11-231)||(26871428-26871653)
chr8 (9-222)||(22103639-22103856)
chr8 (15-197)||(17662488-17662671)
chr8 (15-197)||(17681617-17681800)
chr8 (11-197)||(4837578-4837766)
chr8 (11-197)||(17975638-17975826)
chr8 (1-221)||(30939464-30939685)
chr8 (9-222)||(19850751-19850969)
chr8 (9-222)||(19856787-19857005)
chr8 (1-221)||(39836217-39836439)
chr8 (1-221)||(39844259-39844481)
chr8 (11-231)||(16775200-16775425)
chr8 (11-231)||(16760763-16760988)
chr8 (11-176)||(25585067-25585232)
chr8 (9-184)||(23923067-23923243)
chr8 (22-222)||(36252523-36252723)
chr8 (1-163)||(4583602-4583763)
chr8 (11-103)||(15832007-15832099)
chr8 (9-222)||(23092683-23092896)
chr8 (22-222)||(6582905-6583102)
chr8 (9-103)||(14204590-14204685)
chr8 (9-103)||(14219231-14219326)
chr8 (11-108)||(4843023-4843121)
chr8 (11-222)||(36576759-36576970)
chr8 (22-103)||(16190620-16190700)
chr8 (22-103)||(22418206-22418287)
chr8 (22-103)||(25719112-25719192)
chr8 (22-103)||(31000836-31000916)
chr8 (10-125)||(26912740-26912851)
chr8 (9-103)||(31207712-31207807)
chr8 (22-88)||(17129388-17129454)
chr8 (22-103)||(22366956-22367038)
chr8 (67-221)||(17129235-17129388)
[»] scaffold0039 (1 HSPs)
scaffold0039 (35-231)||(38672-38868)
[»] scaffold0056 (1 HSPs)
scaffold0056 (11-231)||(29851-30072)
[»] chr7 (45 HSPs)
chr7 (1-197)||(18303068-18303265)
chr7 (22-197)||(10442175-10442350)
chr7 (11-188)||(4661900-4662077)
chr7 (11-221)||(13832687-13832897)
chr7 (11-221)||(13840717-13840927)
chr7 (11-231)||(24186144-24186363)
chr7 (22-168)||(10449321-10449467)
chr7 (11-231)||(1886949-1887165)
chr7 (11-231)||(1901050-1901266)
chr7 (22-222)||(5199207-5199407)
chr7 (22-222)||(5208324-5208524)
chr7 (9-186)||(17739396-17739573)
chr7 (11-104)||(4940308-4940401)
chr7 (9-222)||(17211223-17211435)
chr7 (1-222)||(16909841-16910061)
chr7 (22-222)||(16227686-16227885)
chr7 (22-222)||(16244564-16244763)
chr7 (9-222)||(40679896-40680110)
chr7 (22-106)||(29023465-29023548)
chr7 (22-106)||(29031903-29031986)
chr7 (11-103)||(29082024-29082117)
chr7 (11-103)||(29096783-29096876)
chr7 (9-222)||(16545389-16545601)
chr7 (9-222)||(16620061-16620273)
chr7 (22-103)||(16120725-16120805)
chr7 (22-103)||(16147465-16147545)
chr7 (10-107)||(43600636-43600734)
chr7 (22-222)||(16889778-16889976)
chr7 (22-103)||(27965985-27966065)
chr7 (22-103)||(27975438-27975518)
chr7 (39-103)||(15185593-15185657)
chr7 (39-103)||(15200213-15200277)
chr7 (22-103)||(558483-558563)
chr7 (22-103)||(568393-568473)
chr7 (22-103)||(2549000-2549080)
chr7 (22-103)||(2562886-2562966)
chr7 (22-103)||(17514376-17514456)
chr7 (22-103)||(17538758-17538838)
chr7 (22-103)||(27435300-27435382)
chr7 (22-103)||(27444330-27444412)
chr7 (22-103)||(44075242-44075322)
chr7 (10-95)||(4323863-4323947)
chr7 (39-103)||(36476818-36476884)
chr7 (93-231)||(33533462-33533599)
chr7 (22-70)||(19384138-19384185)
[»] scaffold0015 (3 HSPs)
scaffold0015 (9-230)||(188494-188716)
scaffold0015 (9-103)||(194811-194906)
scaffold0015 (22-103)||(159154-159234)
[»] scaffold0431 (1 HSPs)
scaffold0431 (11-221)||(4331-4543)
[»] scaffold0257 (1 HSPs)
scaffold0257 (11-197)||(10140-10328)
[»] scaffold1804 (1 HSPs)
scaffold1804 (11-129)||(24-142)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-231)||(109317-109540)
[»] scaffold0222 (1 HSPs)
scaffold0222 (9-221)||(10014-10226)
[»] scaffold0091 (1 HSPs)
scaffold0091 (9-197)||(19766-19955)
[»] scaffold0077 (1 HSPs)
scaffold0077 (22-197)||(32399-32573)
[»] scaffold0357 (1 HSPs)
scaffold0357 (9-127)||(4297-4415)
[»] scaffold0278 (1 HSPs)
scaffold0278 (22-176)||(10404-10556)
[»] scaffold0043 (1 HSPs)
scaffold0043 (9-222)||(63164-63376)
[»] scaffold0044 (2 HSPs)
scaffold0044 (9-103)||(80553-80648)
scaffold0044 (10-103)||(64152-64246)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-103)||(46678-46759)
[»] scaffold0144 (1 HSPs)
scaffold0144 (15-103)||(160-248)
[»] scaffold0545 (1 HSPs)
scaffold0545 (138-231)||(8035-8130)
[»] scaffold0031 (1 HSPs)
scaffold0031 (9-103)||(508-603)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-103)||(21658-21760)
[»] scaffold1481 (1 HSPs)
scaffold1481 (22-103)||(1550-1631)
[»] scaffold0451 (1 HSPs)
scaffold0451 (9-103)||(4588-4684)
[»] scaffold0047 (1 HSPs)
scaffold0047 (9-103)||(83481-83576)
[»] scaffold0497 (1 HSPs)
scaffold0497 (138-231)||(12655-12749)
[»] scaffold0455 (1 HSPs)
scaffold0455 (22-103)||(3801-3882)
[»] scaffold0023 (2 HSPs)
scaffold0023 (22-103)||(145509-145591)
scaffold0023 (9-91)||(136533-136617)
[»] scaffold0429 (1 HSPs)
scaffold0429 (9-103)||(14925-15021)
[»] scaffold0007 (2 HSPs)
scaffold0007 (138-231)||(19427-19519)
scaffold0007 (147-231)||(26354-26437)
[»] scaffold0273 (1 HSPs)
scaffold0273 (9-65)||(22924-22980)
[»] scaffold1547 (1 HSPs)
scaffold1547 (74-103)||(1633-1662)


Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 28991322 - 28991542
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28991322 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 28991421  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28991422 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 28991521  T
Q  211 ggttttaagaagggataagag 231  Q
    |||||||||||||||||||||    
T  28991522 ggttttaagaagggataagag 28991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13804062 - 13804286
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| || |||||| ||||||||||||||||||||||    
T  13804062 ctaaattgatttgcttatttgaaaattactacctaaaaatctaagtgaaagaatggggggagaagaaatatgttttttgttatttttatttgatttggaa 13804161  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagat 200  Q
    ||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13804162 ggataaaaatcctatgcttacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaggt 13804261  T
Q  201 tttagaaaatggttttaagaaggga 225  Q
    |||||||||||||||||||||||||    
T  13804262 tttagaaaatggttttaagaaggga 13804286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 21497088 - 21497312
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21497088 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 21497187  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  21497188 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaag 21497287  T
Q  199 attttagaaaat-ggttttaagaag 222  Q
    ||||| |||||| ||||||||||||    
T  21497288 atttttgaaaatgggttttaagaag 21497312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 13452222 - 13451999
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13452222 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagcatggagggagaagaagtatgtttttggttatttttatttgttttggaaggataaa 13452123  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaa 207  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  13452122 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctctttggtgggttggttgattttaaattttagaa 13452023  T
Q  208 aatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||    
T  13452022 aatggttttaagaagggataagag 13451999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2385367 - 2385138
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2385367 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 2385268  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacct-aaaaagtttctttttggtgggttggttgattttaga 199  Q
    |||| |||  ||| |||||||||||||||        |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |    
T  2385267 ggattaaa--cctttgcctacatacccttaaaggaaagggatcaaaaccaatgtagttcacctaaaaaagtttcttttgggtgggttggttgattttaaa 2385170  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||||||||||    
T  2385169 ttttagaaaatggttttaagaagggataagag 2385138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 41744718 - 41744939
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41744718 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaa 41744817  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttag-aaa 208  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||    
T  41744818 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttc-ttttggtgggttggttgattttaaattttagaaaa 41744916  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||||||||| ||||||||    
T  41744917 atggttttaagaagagataagag 41744939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 32135325 - 32135547
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  32135325 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatatttttggttatttttatttgatttggaaggataaaaat 32135424  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgatttta--gattttagaaa 208  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||| ||||    
T  32135425 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttaattttaacaattttggaaa 32135524  T
Q  209 atggttttaagaagggataagag 231  Q
    | |||||||||||| ||| ||||    
T  32135525 aaggttttaagaagagattagag 32135547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 3431621 - 3431804
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatccta 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3431621 ttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatccta 3431720  T
Q  115 tgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  3431721 tgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttgttgggttaggttgatttta 3431804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 31541356 - 31541135
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  31541356 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 31541257  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  31541256 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 31541159  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  31541158 atttttgaaaatgggttttaagaa 31541135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 31549925 - 31549704
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  31549925 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 31549826  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  31549825 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 31549728  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  31549727 atttttgaaaatgggttttaagaa 31549704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 23355617 - 23355853
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagt----ctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgattt 96  Q
    ||||| ||||||||||||||||||||||||||||||||      ||| | ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  23355617 ctaaattgatttgcttatttgaaaattattacctaaaaaatctactatgcgaaagaatgggcggagaagaagtatgtttttggttatttttatttgattt 23355716  T
Q  97 ggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattt 195  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||  |||||||||||||||| | |||||||    
T  23355717 ggaaggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaaattctttttggtgggttagattgattt 23355816  T
Q  196 t-agattttagaaaatggttttaagaagggataagag 231  Q
    | | ||||| |||||||||||||||||| ||||||||    
T  23355817 taatatttttgaaaatggttttaagaagagataagag 23355853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 13477226 - 13477078
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13477226 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 13477127  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttc 159  Q
    |||||||||||||||||||        ||||||||||||||||||||||    
T  13477126 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttc 13477078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 28459968 - 28459743
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| || |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28459968 atttgcttacttgaaaaattgttacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaa 28459869  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt- 203  Q
    ||||||||| ||||||||||||        |||||||||| |||||||||||||||||| | ||||  ||||||||||| |||||||||||   |||||     
T  28459868 aatcctatgtctacatacccttaaagaaaagggatcaaaatcaatgtagttcacctaaagaatttc--tttggtgggttaggttgattttaacaattttg 28459771  T
Q  204 agaaaatggttttaagaagggataagag 231  Q
    | |||| |||||||||||||||||||||    
T  28459770 aaaaaaaggttttaagaagggataagag 28459743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 43456242 - 43456044
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaag--tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttgg 98  Q
    ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |    
T  43456242 ctaaattgatttgcttatttgaaaattattacctaaaaaaatctaagtgaaagaatggagggagaagaagtatatttttggttatttttatttgattttg 43456143  T
Q  99 aaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgatttta 197  Q
    ||||||  || |||| |||||| ||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  43456142 aaggat-taactcctttgcctatatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttggattgatttta 43456044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 51055327 - 51055503
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||    
T  51055327 atttgcttatttaaaaattattgcctaaaagtctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggat-taa 51055425  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt 186  Q
     | || || ||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51055426 cttctttggctacatacccttaaaagaaagggatcaaaaccaatgtagttcacctaaaaaggttctttttggtgggtt 51055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 8241078 - 8241229
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacg-tttttggttatttttatttgatttggaaggataaa 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8241078 atttgcttatttgaaaattattgcctaaaagtctaagtgaaagaatggggggagaagaagtaagttttttggttatttttatttgatttggaaggataaa 8241177  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttc 159  Q
    |||||| |||||||||||||||        ||||||||||||||||||||||    
T  8241178 aatcctttgcctacatacccttaaagaaaagggatcaaaaccaatgtagttc 8241229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 31553533 - 31553334
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31553533 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 31553435  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||| ||| |||| ||||||||||||||    
T  31553434 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttggttttaagattttttgaaaatggttttaa 31553338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 31562667 - 31562468
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31562667 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 31562569  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||| ||| |||| ||||||||||||||    
T  31562568 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttggttttaagattttttgaaaatggttttaa 31562472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 21055064 - 21054863
Alignment:
Q  13 gcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcc 112  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||  ||    
T  21055064 gcttatttgaaaattattgcctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaatgat-taacgcc 21054966  T
Q  113 tatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacct-aaaaagtttctttttggtgggttgg-ttgattttagattttagaaaat 210  Q
    | | |||||||||||||        |||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||  ||| ||||| ||||||    
T  21054965 ttttcctacatacccttaaagaaaagggatcaaaaccaatgtagttcccctgaaaaaatttctttttggtgggttggattga--ttaaatttttgaaaat 21054868  T
Q  211 ggttt 215  Q
    |||||    
T  21054867 ggttt 21054863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 22472730 - 22472532
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  22472730 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 22472633  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaag 219  Q
     |||||||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  22472632 gtacccttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaag 22472535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 16135307 - 16135095
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  16135307 atttgcttacttgaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 16135211  T
Q  108 aatcctatgcctacataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agatttta 204  Q
    | |||| ||||||| ||||| ||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| |||||||     
T  16135210 agtcctctgcctacgtaccctttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagattttt 16135113  T
Q  205 gaaaatggttttaagaag 222  Q
    ||||||||||||||||||    
T  16135112 gaaaatggttttaagaag 16135095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22479827 - 22479724
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttgga 99  Q
    ||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22479827 ctaaaattatttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttgga 22479728  T
Q  100 agga 103  Q
    ||||    
T  22479727 agga 22479724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 20502304 - 20502091
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  20502304 atttgcttacttgaaaaattattacctaaaaatctaagtggaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 20502207  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| | ||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  20502206 agtcctctacctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttg 20502109  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  20502108 aaaatgggttttaagaag 20502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 52101331 - 52101236
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  52101331 atttgcttatttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaaatatgtttttggttatttttatttgatttggaagga 52101236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 3350741 - 3350953
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  | |    
T  3350741 atttgcttacttgaaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttgtttttatttgatttggaagg--aca 3350838  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-tttta 204  Q
    | |||| ||||||| |||||||        |||||||||||||| |||||||  || |||| ||||  ||||||||||| |||||||||| ||| ||||     
T  3350839 agtcctctgcctacgtaccctt-ttgggaagggatcaaaaccaacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttt 3350935  T
Q  205 gaaaatggttttaagaag 222  Q
    ||||||||||||||||||    
T  3350936 gaaaatggttttaagaag 3350953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 23952306 - 23952221
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgattt 96  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  23952306 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgattt 23952221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 32608778 - 32608685
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttgg-ttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32608778 ttgcttatttgaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggtttatttttatttgatttggaagga 32608685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 34336843 - 34336924
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34336843 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 34336924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 38123654 - 38123734
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38123654 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 38123734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 36848721 - 36848813
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    |||| ||||||||||| ||||| |||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||    
T  36848721 ttatatgaaaattattgcctaagagtctaggtgaaagaatggagggagaagaagtatgttttttgttgtttttatttgatttggaatgataaa 36848813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 12464260 - 12464354
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  12464260 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaataagtatg-ttttggttatttttatttgatttggaagga 12464354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 11950378 - 11950321
Alignment:
Q  141 atcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgatttta 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11950378 atcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggattgatttta 11950321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 18702630 - 18702433
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||| ||||| |||||||| |||||||  |||||||||||||  | || |||  |||||||    
T  18702630 aaaattattgcctaat-gtctaagtgaaagaatggagggagaaaaagtatgtttttgg-tattttttattgatttggaagg--acaagtcccttgcctac 18702535  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatg-gttttaa 218  Q
     |||||||        |||||||||||| | ||||||  ||| |||| ||||  ||||||||||| |||||||||| ||||||| ||||||| |||||||    
T  18702534 gtacccttttgggaaagggatcaaaaccgacgtagtttccctcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgagttttaa 18702437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 4282763 - 4282840
Alignment:
Q  49 aagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacataccct 128  Q
    |||||||||||||||||||  | |||||| ||| ||||||||||||||||||||||  ||||| | ||||||||||||||    
T  4282763 aagaatggagggagaagaaacatgttttttgttgtttttatttgatttggaaggat--aaatcatttgcctacataccct 4282840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 773337 - 773117
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  773337 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 773238  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  773237 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttatttttggtgggttggttgattttagattttagaaaat 773138  T
Q  211 ggttttaagaagggataagag 231  Q
    |||||||||||||||||||||    
T  773137 ggttttaagaagggataagag 773117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 10640534 - 10640314
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10640534 ttgcttatttgaaaattattacttaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 10640435  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10640434 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgactttagattttagaaaat 10640335  T
Q  211 ggttttaagaagggataagag 231  Q
    |||||||||||||||||||||    
T  10640334 ggttttaagaagggataagag 10640314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 8092952 - 8093173
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8092952 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 8093051  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga-ttttagaaaa 209  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8093052 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctgaaaagtttctttttggtgggttggttgattttagatttttagaaaa 8093151  T
Q  210 tggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||    
T  8093152 tggttttaagaagggataagag 8093173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 12998719 - 12998500
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |    
T  12998719 ttgcttatttaaaaattattacctaaaagtctaagtgaaagaatggagggataagaagtatgtttttggttatttttatttgatttggaaggataaaatt 12998620  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    | | |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12998619 cttttgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaattttagaaaat 12998520  T
Q  211 ggttttaagaagggataaga 230  Q
    ||||||||||||||||||||    
T  12998519 ggttttaagaagggataaga 12998500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 8101757 - 8101978
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8101757 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 8101856  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga-ttttagaaaa 209  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8101857 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctgaaaagtttctttttggtgggttggttgattttagatttttagaaaa 8101956  T
Q  210 tggttttaagaagggataagag 231  Q
    |||||| |||||||||||||||    
T  8101957 tggtttcaagaagggataagag 8101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 27341737 - 27341943
Alignment:
Q  20 tgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27341737 tgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcct 27341836  T
Q  120 acatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatgg-ttttaa 218  Q
    ||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  27341837 acataccctttaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttggttgcttttaaattttagaaaatggtttttaa 27341936  T
Q  219 gaaggga 225  Q
    |||||||    
T  27341937 gaaggga 27341943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 52297881 - 52297702
Alignment:
Q  7 tgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataa 106  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52297881 tgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataa 52297782  T
Q  107 aaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt 186  Q
    |||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52297781 aaatcctatgcctacataccttttaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt 52297702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 21530322 - 21530546
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  21530322 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 21530421  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttaga 206  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| ||    
T  21530422 tcccatgcctacatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaagattttttga 21530521  T
Q  207 aaatggttttaagaagggataagag 231  Q
    ||||||||||||||| |||||||||    
T  21530522 aaatggttttaagaaaggataagag 21530546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 1875560 - 1875785
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  1875560 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 1875659  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt-ag 205  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||| |     
T  1875660 tcccatgcctacatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaacaattttgaa 1875759  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    |||| |||||||||||||||||||||    
T  1875760 aaaaaggttttaagaagggataagag 1875785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 1889675 - 1889900
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  1889675 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 1889774  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt-ag 205  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||| |     
T  1889775 tcccatgcctacatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaacaattttgaa 1889874  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    |||| |||||||||||||||||||||    
T  1889875 aaaaaggttttaagaagggataagag 1889900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 12425432 - 12425644
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  12425432 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatggggggagaaaaagtatgtttttggttatttttatttgatttggaaggataaaaa 12425531  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gattttaga 206  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  |||| |||||| |||||||||||   ||||| ||    
T  12425532 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttgatgggttaggttgattttaagaatttttga 12425629  T
Q  207 aaatggttttaagaa 221  Q
    |||||||||||||||    
T  12425630 aaatggttttaagaa 12425644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 20865875 - 20865993
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  20865875 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaaaaagtatgtttttggttatttttatttgatttggaaggataaaaat 20865974  T
Q  111 cctatgcctacataccctt 129  Q
    |||||||||||||||||||    
T  20865975 cctatgcctacataccctt 20865993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 4522434 - 4522545
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatccta 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4522434 ttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatccta 4522533  T
Q  115 tgcctacatacc 126  Q
    ||||||||||||    
T  4522534 tgcctacatacc 4522545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 4747630 - 4747829
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4747630 aaaattattgcctaat-gtctaagtgaaagaatggagggaggagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 4747728  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||| ||| |||| ||||||||||||||    
T  4747729 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttggttttaagattttttgaaaatggttttaa 4747825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 21399035 - 21399252
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  | |    
T  21399035 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaaatatgtttttggttatttttatttgatttggaagg--aca 21399132  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--tttt 203  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| |||  ||||    
T  21399133 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttt 21399230  T
Q  204 agaaaatggttttaagaaggga 225  Q
     |||||||||||||||||||||    
T  21399231 tgaaaatggttttaagaaggga 21399252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 55584372 - 55584585
Alignment:
Q  9 atttgcttatttg-aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||       
T  55584372 atttgcttacttggaaaattattacctaaaaatctaagtgaaagaatggagggagaggaagtatgtttttggttatttttatttgatttcgaaggat-tg 55584470  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  |||||||||||||||        |||||||||||||||||||||||||| |||| ||||  |||||| |||| |||||||||| ||||||| |    
T  55584471 actcccttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggttggttaggttgattttaagatttttg 55584567  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  55584568 aaaatgggttttaagaag 55584585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 26210600 - 26210688
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26210600 ttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 26210688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 26219360 - 26219448
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26219360 ttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 26219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 34842832 - 34842634
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  34842832 aaaattattacctaaaaatctaagtgaaagaatggaggaagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 34842735  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaag 219  Q
     |||||||        |||||||||||| | |||||||  |||||||  |||  ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  34842734 gtacccttttgggaaagggatcaaaaccgacgtagttccactaaaaaaattc--tttggtgggttaggttgattttaagatttttgaaaatggttttaag 34842637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26034168 - 26034271
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  26034168 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggaggaagaagaagaatgtttttggttatttttatttgatttggaa 26034267  T
Q  101 ggat 104  Q
    ||||    
T  26034268 ggat 26034271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 25247385 - 25247584
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  25247385 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 25247482  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  |||||||  |||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  25247483 gtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaaattc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 25247580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 19645093 - 19645291
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  19645093 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 19645189  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaa 218  Q
     |||||||        |||||||||||| | |||||||  |  |||| ||||  ||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  19645190 gtacccttttgggaaagggatcaaaaccgacgtagttccacacaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaa 19645287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 10786793 - 10786713
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10786793 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 10786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 18010216 - 18010017
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| | ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  18010216 aaaattattacctaaaaatataaatgaaagaatgaagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 18010119  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaa 218  Q
     |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  18010118 gtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaa 18010021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 19759960 - 19759880
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19759960 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 19759880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 19774716 - 19774636
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19774716 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 19774636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 14718712 - 14718807
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14718712 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 14718807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 21811096 - 21811167
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgat 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21811096 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgat 21811167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 25652675 - 25652753
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||| || ||||||| |||||||||||||||||||||    
T  25652675 aaaattattacctaaaaatctaagtgaaagaatggagagaaaagaaatatgtttttgattatttttatttgatttggaa 25652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 20866021 - 20866066
Alignment:
Q  186 tggttgattttagattttagaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  20866021 tggttgattttagattttagaaaatggttttaagaaggaataagag 20866066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 14736997 - 14737064
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgttt 75  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||||| ||||    
T  14736997 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaagaagtatgttt 14737064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 24924638 - 24924559
Alignment:
Q  144 aaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaagaag 222  Q
    |||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  24924638 aaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaagaag 24924559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 50826697 - 50826477
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  50826697 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgacttggaaggataaaaat 50826598  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50826597 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 50826498  T
Q  211 ggttttaagaagggataagag 231  Q
    |||||||||||||||||||||    
T  50826497 ggttttaagaagggataagag 50826477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 8153335 - 8153567
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8153335 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 8153434  T
Q  101 gga-taaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga 199  Q
    ||| | ||||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8153435 ggattgaaaatcctatgcctacatacccttaaacaaaagggatcaaaaccaatgtagttcacctgaaaagtttctttttggtgggttggttgattttaga 8153534  T
Q  200 -ttttagaaaatggttttaagaagggataagag 231  Q
     ||||||||||||||||||||||||||||||||    
T  8153535 tttttagaaaatggttttaagaagggataagag 8153567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 8204235 - 8204459
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8204235 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagagagaagaagtatgtttttggttatttttatttgatttggaa 8204334  T
Q  101 gga-taaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga 199  Q
    ||| | ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8204335 ggattgaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga 8204434  T
Q  200 ttttagaaaatggttttaagaaggg 224  Q
    |||||||||||||||||||||||||    
T  8204435 ttttagaaaatggttttaagaaggg 8204459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 8196424 - 8196655
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8196424 ctaaattgattttcttatttgaaaattattacctaaaagtctaagtgaaagaatggagagagaagaagtatgtttttggttatttttatttgatttggaa 8196523  T
Q  101 gga-taaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga 199  Q
    ||| | ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8196524 ggattgaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtggtttggttgattttaga 8196623  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||| ||||||||    
T  8196624 ttttagaaaatggttttaagaagagataagag 8196655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 3711937 - 3711711
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3711937 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 3711838  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttag--- 205  Q
    ||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       
T  3711837 atcctgtgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaattttagaaa 3711738  T
Q  206 -aaaatggttttaagaagggataagag 231  Q
     |||| |||||||||||||||||||||    
T  3711737 aaaaaaggttttaagaagggataagag 3711711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 50849156 - 50849381
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggat--aaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||    
T  50849156 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggattgaaaa 50849255  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga---ttttag 205  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  50849256 atcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagatttttttag 50849355  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||||    
T  50849356 aaaatggttttaagaagggataagag 50849381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 51922267 - 51922498
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  51922267 ctaaattgatttgtttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttctttgatttggaa 51922366  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga- 199  Q
    ||||||||||||| |||||||||||| ||        |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |     
T  51922367 ggataaaaatcctctgcctacatacctttaaagaaaggggatcaaaaccaacgtagttcacctaaaaagtttctttttggtgggttggttgattttaaat 51922466  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||||||||||    
T  51922467 ttttagaaaatggttttaagaagggataagag 51922498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27550851 - 27551083
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  27550851 ctaaattgatttgcttatttgaaaattaatatctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttacttgatttggaa 27550950  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  27550951 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaag 27551050  T
Q  199 attttagaaaatggttttaagaagggataagag 231  Q
    ||||| ||||||||||||||||| |||||||||    
T  27551051 atttttgaaaatggttttaagaaaggataagag 27551083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 18949657 - 18949879
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18949657 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatagggggagaagaagtatgtttttggttatttttatttgacttggaaggataaaaa 18949756  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga-ttttagaaa 208  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18949757 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagatttttagaaa 18949856  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||| ||||||||||||||    
T  18949857 atggttttgagaagggataagag 18949879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 13507456 - 13507677
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga-taaaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||| | ||||    
T  13507456 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggggggagaagaggtatgtttttggttatttttattcgatttggaaggattgaaaa 13507555  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaa 209  Q
    ||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13507556 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgcagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaa 13507655  T
Q  210 tggttttaagaagggataagag 231  Q
    |||||||||||  |||||||||    
T  13507656 tggttttaagagaggataagag 13507677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 27339075 - 27339262
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27339075 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 27339174  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27339175 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcaccaaaaaagtttctttttggtgggttaggttgatttta 27339262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 4435767 - 4435580
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4435767 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaaggatgaaaat 4435668  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4435667 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 4435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 4456558 - 4456371
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||    
T  4456558 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatatttttggttatttttatttgatttggaaggatgaaaat 4456459  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4456458 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 4456371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 14425973 - 14425756
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14425973 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaa 14425874  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |    
T  14425873 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaagttgattttaagatttttg 14425774  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  14425773 aaaatgggttttaagaag 14425756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 18900547 - 18900765
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttt-tggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  18900547 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggggggagaaggagtatgttttttggttatttttatttgatttggaaggataaaaa 18900646  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||    
T  18900647 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttgatgggttaggttgattttaagatttttgaa 18900746  T
Q  208 aat-ggttttaagaaggga 225  Q
    ||| |||||| ||||||||    
T  18900747 aatgggtttttagaaggga 18900765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 18890364 - 18890568
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttt-tggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  18890364 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatgggaggagaaggagtatgttttttggttatttttatttgatttggaaggataaaaa 18890463  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||    
T  18890464 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaagatttttgaa 18890563  T
Q  208 aatgg 212  Q
    |||||    
T  18890564 aatgg 18890568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 30062844 - 30063032
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30062844 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaa 30062943  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30062944 tcccatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 30063032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 17935424 - 17935197
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17935424 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 17935325  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtggg-ttggttgattttaga 199  Q
    ||||  || |||| |||||||||||||||        |||||||||||||||||||||||||| |||| ||  ||||||||||| ||||||||||||| |    
T  17935324 ggat-taactcctttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatt--tttttggtgggtttggttgattttaaa 17935229  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||| ||||||||    
T  17935228 ttttagaaaatggttttaagaagagataagag 17935197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41016743 - 41016522
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  41016743 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 41016644  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  41016643 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 41016546  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  41016545 atttttgaaaatgggttttaagaa 41016522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 15694759 - 15694546
Alignment:
Q  11 ttgcttatttgaaaattatt-acctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15694759 ttgcttatttgaaagttatttacctaaaaatctaagtgaaagaatgggggaagaagaagtatggttttggttatttttatttgatttggaaggataaaaa 15694660  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||| |||    
T  15694659 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttgggttgattttaaggtttttgaa 15694560  T
Q  208 aatggttttaagaa 221  Q
    ||||||||||||||    
T  15694559 aatggttttaagaa 15694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 15697072 - 15696859
Alignment:
Q  11 ttgcttatttgaaaattatt-acctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15697072 ttgcttatttgaaagttatttacctaaaaatctaagtgaaagaatgggggaagaagaagtatggttttggttatttttatttgatttggaaggataaaaa 15696973  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||| |||    
T  15696972 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttgggttgattttaaggtttttgaa 15696873  T
Q  208 aatggttttaagaa 221  Q
    ||||||||||||||    
T  15696872 aatggttttaagaa 15696859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 15711362 - 15711149
Alignment:
Q  11 ttgcttatttgaaaattatt-acctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15711362 ttgcttatttgaaagttatttacctaaaaatctaagtgaaagaatgggggaagaagaagtatggttttggttatttttatttgatttggaaggataaaaa 15711263  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||| |||    
T  15711262 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttgggttgattttaaggtttttgaa 15711163  T
Q  208 aatggttttaagaa 221  Q
    ||||||||||||||    
T  15711162 aatggttttaagaa 15711149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 39707195 - 39706967
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  39707195 ctaaattgatttgcttatttgaaaattaatacctaaaaatctaagtgaaagaatggaggaagaggaagtatgtttttgattatttttatttgatttggaa 39707096  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttaga 199  Q
    |||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| |    
T  39707095 ggatgaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-a 39706999  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    |||| |||||| ||||||||||| ||||||||    
T  39706998 tttttgaaaatagttttaagaagagataagag 39706967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 16814589 - 16814818
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  16814589 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgaagggagaaaaagtatgtttttggttatttttatttgatttggaa 16814688  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtggg-ttggttgattttaga 199  Q
    ||||  || | || |||||||||||||||        ||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||| |    
T  16814689 ggat-taacttctttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctaaataatttctttttgatgggtttggttgattttaaa 16814786  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||| ||||| ||||||||    
T  16814787 ttttagaaaatggttttgagaagagataagag 16814818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 2256766 - 2256601
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  2256766 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatatttttggttatttttatttgatttggaaggataaaaat 2256667  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttcttt 176  Q
    ||| |||||||||||||||        |||||||||||||||||||||||||| |||| |||||||    
T  2256666 cctctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttcttt 2256601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 43468278 - 43468472
Alignment:
Q  2 taaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaag 101  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||| | ||||||||||||||||||||||||||||    
T  43468278 taaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaaaggggggagaaaaagtatg-ttttggttatttttatttgatttggaag 43468376  T
Q  102 gataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||  || |||| |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43468377 gat-taactcctttgcctacatacccttaaaagaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 43468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 17360426 - 17360194
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  17360426 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaataatggagggagaagaagtatgttttt-gttttttttatttgatttggaa 17360328  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-- 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||| ||||| |||||| |||| ||  | ||| ||||||| |||||||||||      
T  17360327 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccattgtagctcacctcaaaaatt--tatttagtgggttaggttgattttaat 17360230  T
Q  198 --gattttagaaaatggttttaagaagggataagag 231  Q
        |||| |||||||||||||||||| ||||||||    
T  17360229 attttttttgaaaatggttttaagaagagataagag 17360194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 17365068 - 17364836
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  17365068 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaataatggagggagaagaagtatgttttt-gttttttttatttgatttggaa 17364970  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-- 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||| ||||| |||||| |||| ||  | ||| ||||||| |||||||||||      
T  17364969 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccattgtagctcacctcaaaaatt--tatttagtgggttaggttgattttaat 17364872  T
Q  198 --gattttagaaaatggttttaagaagggataagag 231  Q
        |||| |||||||||||||||||| ||||||||    
T  17364871 attttttttgaaaatggttttaagaagagataagag 17364836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 6293743 - 6293941
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6293743 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 6293841  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaag 219  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  |||| |||||| |||||||||| ||||||| ||| |||||||||||    
T  6293842 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttgatgggttaggttgattttaagatttttgaagatggttttaag 6293938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 1004338 - 1004538
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1004338 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaaggataaaaatcctatgcctac 1004436  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttga-ttttaga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| | |||| ||||||| |||| ||||||||||||||    
T  1004437 ataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttagattgatttttagactttttgaaaatggttttaa 1004534  T
Q  219 gaag 222  Q
    ||||    
T  1004535 gaag 1004538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 10720928 - 10721128
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggtt-atttttatttgatttggaaggataaaaatcctatgccta 120  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10720928 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggtttatttttatttgatttggaaggataaaaatcctatgccta 10721026  T
Q  121 catacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
    |||||||||        |||||||||||||||||||||||||| |||| ||||  |||||||| || | |||||||| ||||||| ||||||||||||||    
T  10721027 cataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtggtttagattgattttaagatttttgaaaatggttttaa 10721124  T
Q  219 gaag 222  Q
    ||||    
T  10721125 gaag 10721128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 18041254 - 18041059
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||    
T  18041254 ctaaattgatttgcttatttgaatattattacctaaaaatctaagtgaaagaatggagggagaagaagcatgttcttggttatttatatttgatttggaa 18041155  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgatttta 197  Q
    ||||  || |||  |||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  18041154 ggat-taactcccttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctaaaaagtttttttttggtgggttggattgatttta 18041059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 18351373 - 18351158
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||       
T  18351373 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttaaattggaaggat-tg 18351275  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  18351274 actcccctgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaagatttttg 18351176  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  18351175 aaaatgggttttaagaag 18351158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 41007920 - 41007743
Alignment:
Q  45 gtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatca 144  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||    
T  41007920 gtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttaaagaaaagggatca 41007821  T
Q  145 aaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaagaa 221  Q
    ||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  41007820 aaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaagaa 41007743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 6563912 - 6563730
Alignment:
Q  42 taagtgaaagaatggagggagaagaagtacgttttt-ggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnnggg 140  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        |||    
T  6563912 taagtgaaagaatggagggagaagaagtatgttttttggttatttttatttgatttggaaggataaaaatcctatgcctacataccctt-aaagaaaggg 6563814  T
Q  141 atcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggttttaagaag 222  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |||  |||| ||||||||||||||||||    
T  6563813 atcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttttgaaaatggttttaagaag 6563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 6577581 - 6577399
Alignment:
Q  42 taagtgaaagaatggagggagaagaagtacgttttt-ggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnnggg 140  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        |||    
T  6577581 taagtgaaagaatggagggagaagaagtatgttttttggttatttttatttgatttggaaggataaaaatcctatgcctacataccctt-aaagaaaggg 6577483  T
Q  141 atcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggttttaagaag 222  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |||  |||| ||||||||||||||||||    
T  6577482 atcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttttgaaaatggttttaagaag 6577399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 9183894 - 9184020
Alignment:
Q  105 aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagatttta 204  Q
    |||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9183894 aaaaatcctatgcctacataccctttaagaaaagggatcaaaaccaatgtagatcacctaaaaagtttctttttggtgggttggttgattttaaatttta 9183993  T
Q  205 gaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||    
T  9183994 gaaaatggttttaagaagggataagag 9184020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 16291020 - 16290823
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   | |||  |||||||    
T  16291020 aaaattataacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggat-tgactcccctgcctac 16290922  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaag 219  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  16290921 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaattttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaag 16290825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 2215132 - 2215331
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||       
T  2215132 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaataagtatgtttttggttatttttatttgatttggaaggat-tg 2215230  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  |||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  2215231 actcccttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttg 2215327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 21185629 - 21185849
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||  ||    
T  21185629 atttgcttatttgaaaattattgcctaaaggtctaagtgaaagaatgaagggagaagaagtatgttttttgttgtttttatttgatttggaaggat-taa 21185727  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgattttaga-ttttaga 206  Q
     |||| |||||||||| ||          |||||||||||||||| ||||| |||||| | ||||  ||||||| ||||| ||||||||| | |||| ||    
T  21185728 ctcctttgcctacatatcc-aaaagatttgggatcaaaaccaatgcagttcccctaaagaatttc--tttggtgagttggattgattttaaattttttga 21185824  T
Q  207 aaatggttttaagaagggataagag 231  Q
    |||||||||||||||| ||||||||    
T  21185825 aaatggttttaagaagagataagag 21185849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17630457 - 17630358
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17630457 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 17630358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 13275028 - 13274828
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  13275028 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 13274931  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  ||||||| | | | ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  13274930 gtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaatat-tctttggtgggttaggttgattttaagatttttgaaaatggttttaa 13274832  T
Q  219 gaag 222  Q
    ||||    
T  13274831 gaag 13274828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 27957882 - 27958018
Alignment:
Q  84 ttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgg 183  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  27957882 ttttatttgatttggaatgataaaaatcctttgcctacatacccttaaatgaaagggatcaaaaccaatgtagttcacctaaaaaatttcttttttgtgg 27957981  T
Q  184 gttg-gttgattttagattttagaaaatggttttaag 219  Q
    ||||  ||||||||| ||||| |||||||||||||||    
T  27957982 gttgaattgattttaaatttttgaaaatggttttaag 27958018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 11918413 - 11918508
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11918413 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 11918508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 11932983 - 11933078
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11932983 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 11933078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 31278820 - 31278608
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  |      
T  31278820 atttgcttacttgaaaaattatttcctaaaaatctaagtgaaagaatgaagggagaagaagtatgtttttggttatttttatttgatttggaagg--acg 31278723  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | | |||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  31278722 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgcagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttg 31278625  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  31278624 aaaatggttttaagaag 31278608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 231
Target Start/End: Original strand, 27958025 - 27958216
Alignment:
Q  35 aaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnn 134  Q
    |||| |||||||||||||||||  |||||||||  | ||||||||||    ||||||||||||||| |||||||||||| |||||||||||| ||         
T  27958025 aaaaatctaagtgaaagaatgg--ggagaagaaacatgtttttggtt----ttatttgatttggaatgataaaaatcctttgcctacatacctttaaatg 27958118  T
Q  135 nnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttg-gttgattttagattttagaaaatggttttaagaagggataagag 231  Q
       |||||||||| |||||| ||||||||||||| ||||||||| ||||||||  ||||||||| ||||| |||||||||| ||||||| ||||||||    
T  27958119 aaagggatcaaaatcaatgtcgttcacctaaaaaatttctttttagtgggttgaattgattttaaatttttgaaaatggttctaagaagagataagag 27958216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 5144480 - 5144573
Alignment:
Q  11 ttgcttatttgaaaa--ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5144480 ttgcttatttgaaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 5144573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 1480207 - 1480127
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1480207 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 1480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 27978913 - 27978714
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| | ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  27978913 aaaattattacctaaaaatataaatgaaagaatgaagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 27978816  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaa 218  Q
     |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  27978815 gtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaa 27978718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 17562918 - 17563118
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggtta-tttttatttgatttggaaggataaaaatcctatgccta 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  | || |||| ||||||    
T  17562918 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttattttttatttgatttggaagg--acaagtcctctgccta 17563014  T
Q  121 catacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggtttt 216  Q
    | |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| |||  |||| ||||||||||||    
T  17563015 cgtacccttttggaaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttttgaaaatggtttt 17563112  T
Q  217 aagaag 222  Q
    ||||||    
T  17563113 aagaag 17563118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13847874 - 13847977
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacg-tttttggttatttttatttgatttgga 99  Q
    ||||| |||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  13847874 ctaaattgatttgcttatttgaaaattattacttaagaatctaaatgaaagaatggagggagaagaagtatgttttttgattatttttatttgatttgga 13847973  T
Q  100 agga 103  Q
    ||||    
T  13847974 agga 13847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 30102242 - 30102160
Alignment:
Q  22 aaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30102242 aaaattattacctaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 30102160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 7063836 - 7063931
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||  | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  7063836 atttgcttacttgaaaaattattacctaaaaatctatataaaagaatggagggagaataagtatgtttttggttatttttatttgatttggaagga 7063931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 15675298 - 15675376
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaag 101  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15675298 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaag 15675376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 15683840 - 15683918
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaag 101  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15683840 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaag 15683918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 4503586 - 4503666
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  4503586 aaaattattatctaaaa-tctaagtgaaagaatggagggagaagaaatatgtttttggttttttttatttgatttggaagga 4503666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 25264911 - 25264847
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  25264911 gtctaagtgaaagaatggagggagaagaagtatgtttttagttatttttatttgatttggaagga 25264847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 25274405 - 25274341
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  25274405 gtctaagtgaaagaatggagggagaagaagtatgtttttagttatttttatttgatttggaagga 25274341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 27880521 - 27880426
Alignment:
Q  9 atttgcttattt-gaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggat 104  Q
    |||||||||||| ||||||  |||| |||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||    
T  27880521 atttgcttattttgaaaatgcttacttaaaagtctaagtgaaagaatggaggaagaagaagtatgttttt-gttgtttttatttgatttggaaggat 27880426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 27884916 - 27884821
Alignment:
Q  9 atttgcttattt-gaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggat 104  Q
    |||||||||||| ||||||  |||| |||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  27884916 atttgcttattttgaaaatgcttacttaaaagtctaagtgaaagaatggatggagaagaagtatgttttt-gttgtttttatttgatttggaaggat 27884821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 17616689 - 17616783
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  17616689 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaataagtatg-ttttggttatttttatttgatttggaagga 17616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22952023 - 22951943
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22952023 aaaattattgcctaat-gtctaaatgagagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 22951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22965997 - 22965917
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22965997 aaaattattgcctaat-gtctaaatgagagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 22965917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 7096683 - 7096778
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||  | |||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||    
T  7096683 atttgcttacttgaaaaattattacctaaaaatctatataaaagaatggacggagaataagtatgtttttggttaattttatttgatttggaagga 7096778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27957379 - 27957459
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacct-aaaagtctaagtgaaagaatggagggagaagaagtacgtttttggtt 81  Q
    ||||| |||||||||||||||||||||||| ||| |||| | ||||||||||||||| ||||||||||||| ||||||||||    
T  27957379 ctaaattgatttgcttatttgaaaattattgcctaaaaaatataagtgaaagaatgg-gggagaagaagtatgtttttggtt 27957459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 9567487 - 9567554
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgttttt 77  Q
    |||||||||||||||||| ||  | ||| |||||||||||||||||||||| |||||||||| ||||||    
T  9567487 atttgcttatttgaaaataatgtc-taagagtctaagtgaaagaatggaggaagaagaagtatgttttt 9567554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 24216213 - 24216401
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||  |  | |||| |||||||    
T  24216213 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagta----------tatttttatttgatttggaagg--acgagtcctctgcctac 24216299  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  24216300 gtaccctttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 24216397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 20530715 - 20530936
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20530715 ttgcttatttgaaaattattacctaaaagatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaa 20530814  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaa 209  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20530815 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaa 20530914  T
Q  210 tggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||    
T  20530915 tggttttaagaagggataagag 20530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 5487139 - 5487359
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5487139 ttgcttatttgaaaattattacctaaaagtctaaatgaaagaatggagggggaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 5487238  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5487239 cctatgcctacatacccttaaagaaaagggatcaaaaccactgtagttcacctcaaaagtttctttttggtgggttggttgattttagattttagaaaat 5487338  T
Q  211 ggttttaagaagggataagag 231  Q
    |||||||||||||||||||||    
T  5487339 ggttttaagaagggataagag 5487359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 33300278 - 33300049
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  33300278 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgg-gggagaagaagtatgtttttggttatttttatttgatttggaa 33300180  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagat 200  Q
    |||||||||||  ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33300179 ggataaaaatctcatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaat 33300080  T
Q  201 tttagaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||||||    
T  33300079 tttagaaaatggttttaagaagggataagag 33300049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 14475734 - 14475512
Alignment:
Q  11 ttgcttatttgaaaatta-ttacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14475734 ttgcttatttgaaaattaattacctaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 14475635  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaa 208  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14475634 atcctatgcctacatacccttaaataaaatggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagatttcagaaa 14475535  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||    
T  14475534 atggttttaagaagggataagag 14475512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 30823197 - 30823418
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30823197 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 30823296  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaga-ttttagaaaa 209  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30823297 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctgaaaagtttctttttggtgggttggttgattttagatttttagaaaa 30823396  T
Q  210 tggttttaagaagggataagag 231  Q
    |||||| |||||||||||||||    
T  30823397 tggtttcaagaagggataagag 30823418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 5996803 - 5996584
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5996803 ttgcttatttgaaaaattttacctaaaaatctaagtgaaagaatgaggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 5996704  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  5996703 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttagttgattttaaattttagaaaat 5996604  T
Q  211 ggttttaagaagggataaga 230  Q
    ||||||||||||||| ||||    
T  5996603 ggttttaagaagggaaaaga 5996584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 23927735 - 23927514
Alignment:
Q  11 ttgcttatttgaaaatta-ttacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  23927735 ttgcttatttgaaaattaattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggatacaaa 23927636  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttc-tttttggtgggttggttgattttagattttagaaa 208  Q
    ||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  23927635 tcccatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttcttttttggtgggttggttgattttaaattttagaaa 23927536  T
Q  209 atggttttaagaagggataaga 230  Q
    ||||||||||||||||||||||    
T  23927535 atggttttaagaagggataaga 23927514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 15389430 - 15389619
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15389430 atttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 15389529  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||||        |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  15389530 atcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtaattcacctaaaaagtttctttttggtgggttaggttgatttta 15389619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 25713896 - 25713675
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttgg----ttatttttatttgatttggaaggataa 106  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    || ||||||||||||||||||||||||    
T  25713896 ttgcttatctgaaagttattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttttttttttttatttgatttggaaggataa 25713797  T
Q  107 aaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttaga 206  Q
    |||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  25713796 aaatcctatgcctacatacccttaaagaaaagggatcaaaatcaatgtagttcacctaaaaagtttttttttggtgggttggttgattttcaattttaga 25713697  T
Q  207 aaatggttttaagaagggataa 228  Q
    ||||||||||||||||||||||    
T  25713696 aaatggttttaagaagggataa 25713675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27537569 - 27537341
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  27537569 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 27537470  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttaga 199  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| |    
T  27537469 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-a 27537373  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    |||| |||||| ||||||||||| ||||||||    
T  27537372 tttttgaaaatagttttaagaagagataagag 27537341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27551778 - 27551550
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  27551778 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 27551679  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttaga 199  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| |    
T  27551678 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-a 27551582  T
Q  200 ttttagaaaatggttttaagaagggataagag 231  Q
    |||| |||||| ||||||||||| ||||||||    
T  27551581 tttttgaaaatagttttaagaagagataagag 27551550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 25693131 - 25692937
Alignment:
Q  40 tctaagtgaaagaatggagggagaagaagtacgtttttggttattttt---atttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnn 136  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||           
T  25693131 tctaagtgaaagaatggagggagaagaagtatgtttttggtttttttttttatttgatttggaaggataaaaatcctatgcctacatacccttaaagaaa 25693032  T
Q  137 ngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatggttttaagaagggataagag 231  Q
     |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25693031 agggatcaaaatcaatgtagttcacctaaaaagtttttttttggtgggttggttgattttaaattttagaaaatggttttaagaagggataagag 25692937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 25699772 - 25699578
Alignment:
Q  40 tctaagtgaaagaatggagggagaagaagtacgtttttggttattttt---atttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnn 136  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||           
T  25699772 tctaagtgaaagaatggagggagaagaagtatgtttttggtttttttttttatttgatttggaaggataaaaatcctatgcctacatacccttaaagaaa 25699673  T
Q  137 ngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatggttttaagaagggataagag 231  Q
     |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25699672 agggatcaaaatcaatgtagttcacctaaaaagtttttttttggtgggttggttgattttaaattttagaaaatggttttaagaagggataagag 25699578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 19826597 - 19826815
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  19826597 ttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggaaaagaagtatgtttttggtcatttttatttgatttggaaggataaaaat 19826696  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaaa 209  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| |||||    
T  19826697 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaaa 19826793  T
Q  210 tggttttaagaagggataagag 231  Q
    | ||||||||||| ||||||||    
T  19826794 tagttttaagaagagataagag 19826815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 35090345 - 35090566
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  35090345 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 35090444  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    ||||||||||  |||||||||||| | ||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  35090445 ggataaaaattttatgcctacatatctttaaaaaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 35090542  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  35090543 atttttgaaaatgggttttaagaa 35090566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 13492187 - 13491956
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttat-ttttatttgatttgga 99  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||    
T  13492187 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggggggagaagaagtatgtgtttggttattttttatttgatttgga 13492088  T
Q  100 aggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    |||||   | |||| |||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |    
T  13492087 aggat-tgactcctttgcctacatacccttaaatgaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttagattgattttaa 13491989  T
Q  198 gattttagaaaatggttttaagaagggataagag 231  Q
     ||||| |||||| ||||||||||| ||||||||    
T  13491988 tatttttgaaaat-gttttaagaagagataagag 13491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 27047277 - 27047477
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27047277 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 27047375  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttga-ttttaga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| | |||| ||||||| |||| ||||||||||||||    
T  27047376 ataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttagattgatttttagactttttgaaaatggttttaa 27047473  T
Q  219 gaag 222  Q
    ||||    
T  27047474 gaag 27047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 27057521 - 27057721
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27057521 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 27057619  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttga-ttttaga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| | |||| ||||||| |||| ||||||||||||||    
T  27057620 ataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttagattgatttttagactttttgaaaatggttttaa 27057717  T
Q  219 gaag 222  Q
    ||||    
T  27057718 gaag 27057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 13827905 - 13827683
Alignment:
Q  11 ttgcttatttgaaaatt-attacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13827905 ttgcttatttgaacatttattacctaaaaatctaagtgaaagaatgacgggagaagaagtatgtttttggttatttttatttgatttggaagtataaaaa 13827806  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gattttaga 206  Q
    ||  ||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| |||||||||||   |||||  |    
T  13827805 tctcatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgattttaataattttgaa 13827708  T
Q  207 aaatggttttaagaagggataagag 231  Q
    |||  ||||||||||||||||||||    
T  13827707 aaaaagttttaagaagggataagag 13827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 25993728 - 25993570
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacg-tttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  25993728 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaattgggggagaagaagtatgttttttgattatttttatttgatttggaaggataaaaa 25993629  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaa 168  Q
    |||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  25993628 tcctctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaa 25993570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 25552557 - 25552386
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacg-tttttggttatttttatttgatttggaaggataaaaatcct 113  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||    
T  25552557 ttatttgaaaattattacctaaaaatctaagtgaaagaattgggggagaagaagtatgttttttgattatttttatttgatttggaaggataaaaatgct 25552458  T
Q  114 atgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttg 187  Q
     |||||||||||||||        ||||||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  25552457 ctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacct--aaattttttttttggtgggttg 25552386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 16302982 - 16303196
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       
T  16302982 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggatttg 16303081  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  | |||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  16303082 actcccctacctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttg 16303178  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  16303179 aaaatgggttttaagaag 16303196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 16589161 - 16588951
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |    
T  16589161 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagt 16589064  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    ||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| | |||||||| ||||||| ||||    
T  16589063 cctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttagattgattttaagatttttgaaa 16588966  T
Q  209 at-ggttttaagaag 222  Q
    || ||||||||||||    
T  16588965 atgggttttaagaag 16588951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 16606219 - 16606429
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |    
T  16606219 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagt 16606316  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    ||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| | |||||||| ||||||| ||||    
T  16606317 cctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttagattgattttaagatttttgaaa 16606414  T
Q  209 at-ggttttaagaag 222  Q
    || ||||||||||||    
T  16606415 atgggttttaagaag 16606429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 25654132 - 25653920
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  25654132 atttgcttacttgaaaaattattacctaaaaatttaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 25654035  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  |||||||  |||  ||||||||||| |||||||||| ||||||| |    
T  25654034 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactaaaaaaattc--tttggtgggttaggttgattttaagatttttg 25653937  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  25653936 aaaatggttttaagaag 25653920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 230
Target Start/End: Original strand, 12451533 - 12451755
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtct--aagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataa 106  Q
    ||||||||||||||||||||||||||| || | |  |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||      
T  12451533 atttgcttatttgaaaattattacctagaaatatttaagtgagagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggat-t 12451631  T
Q  107 aaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgattttagatttta- 204  Q
     | |||| |||||||||||||||         ||||||||||||||||||||| ||||||||  |||  ||||||||||||| ||||||||| | ||||     
T  12451632 gactcctttgcctacatacccttaaagaaaatggatcaaaaccaatgtagttcccctaaaaaaattc--tttggtgggttggattgattttaaagtttat 12451729  T
Q  205 gaaaatggttttaagaagggataaga 230  Q
    |||||| ||||| ||||| |||||||    
T  12451730 gaaaatagttttgagaagagataaga 12451755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 21358645 - 21358844
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  21358645 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 21358741  T
Q  122 ataccc--ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggtttta 217  Q
     |||||  ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||    
T  21358742 gtacccttttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggtttta 21358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 23962627 - 23962826
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  23962627 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 23962723  T
Q  122 ataccc--ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggtttta 217  Q
     |||||  ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||    
T  23962724 gtacccttttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggtttta 23962821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 23982737 - 23982936
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  23982737 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 23982833  T
Q  122 ataccc--ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggtttta 217  Q
     |||||  ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||    
T  23982834 gtacccttttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggtttta 23982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 21708582 - 21708768
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||       
T  21708582 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaacaagtatgtttttggttacttttatttgatttggaaggat-tg 21708680  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    | |||  |||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||||    
T  21708681 actcccttgcctacataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgatttta 21708768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 24485460 - 24485672
Alignment:
Q  10 tttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |  |    
T  24485460 tttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acga 24485557  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttaga 206  Q
    ||||| ||||||| | |||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||    
T  24485558 atcctctgcctacgtgcccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttga 24485655  T
Q  207 aaat-ggttttaagaag 222  Q
    |||| ||||||||||||    
T  24485656 aaatgggttttaagaag 24485672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 16635555 - 16635467
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  16635555 ttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttattttttattgatttggaagga 16635467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 16645512 - 16645424
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  16645512 ttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttattttttattgatttggaagga 16645424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 18205153 - 18205248
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18205153 atttgcttacttgaaaaattattacctaaaaagctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 18205248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 18220152 - 18220247
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18220152 atttgcttacttgaaaaattattacctaaaaagctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 18220247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 24920623 - 24920528
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24920623 atttgcttacttgaaaaattattacttaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggtcatttttatttgatttggaagga 24920528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 27960407 - 27960236
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  27960407 aaaattatttcctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 27960311  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
     |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||||    
T  27960310 gtaccctttttggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgatttta 27960236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 30995569 - 30995636
Alignment:
Q  36 aaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30995569 aaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 30995636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 18112061 - 18111981
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18112061 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 18111981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 18126606 - 18126526
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18126606 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 18126526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 28266648 - 28266570
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaag 101  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  28266648 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgttttctgttatttttatttgatttggaag 28266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 28345397 - 28345319
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaag 101  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  28345397 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgttttctgttatttttatttgatttggaag 28345319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 28304362 - 28304283
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttt-tggttatttttatttgatttggaag 101  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  28304362 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgttttcttgttatttttatttgatttggaag 28304283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 1726835 - 1727057
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag--tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1726835 ttgcttatttgaaaattattacctaaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 1726934  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaa 208  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1726935 atcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaa 1727034  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||    
T  1727035 atggttttaagaagggataagag 1727057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 20370777 - 20370981
Alignment:
Q  26 ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatac 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20370777 ttattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggatgaaaatcctatgcctacatac 20370876  T
Q  126 ccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatggttttaagaaggga 225  Q
    ||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20370877 ccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaattttagaaaatggttttaagaaggga 20370976  T
Q  226 taaga 230  Q
    |||||    
T  20370977 taaga 20370981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 20396480 - 20396684
Alignment:
Q  26 ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatac 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20396480 ttattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggatgaaaatcctatgcctacatac 20396579  T
Q  126 ccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatggttttaagaaggga 225  Q
    ||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20396580 ccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaattttagaaaatggttttaagaaggga 20396679  T
Q  226 taaga 230  Q
    |||||    
T  20396680 taaga 20396684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 41093757 - 41093982
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttgga 99  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41093757 ctaaattgatttgcttatttgaaaaattattacctaaaagtataattgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttgga 41093856  T
Q  100 aggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  41093857 aggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaa 41093956  T
Q  198 gattttagaaaat-ggttttaagaag 222  Q
    |||||| |||||| ||||||||||||    
T  41093957 gatttttgaaaatgggttttaagaag 41093982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 31423909 - 31423722
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  31423909 ttgcttatttgaaaattattacctaaaagtctaaatgaaagaatggagggagaaaaagtgtgtttttggttatttttatttgatttggaaggataaaaat 31423810  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||| |||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31423809 cctatgcctgcatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 31423722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 43596721 - 43596911
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  43596721 atttgcttacttgaaaaattattacctaaaagtctaagtgaaagaatggggggagaagaagtatgtttttgtttatttttatttgatttggaaggataaa 43596820  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43596821 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 43596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 43629515 - 43629705
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  43629515 atttgcttacttgaaaaattattacctaaaagtctaagtgaaagaatggggggagaagaagtatgtttttgtttatttttatttgatttggaaggataaa 43629614  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43629615 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 43629705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24955500 - 24955721
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  24955500 ctaaactgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 24955599  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  24955600 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 24955697  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  24955698 atttttgaaaatgggttttaagaa 24955721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24963960 - 24964181
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  24963960 ctaaactgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 24964059  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  24964060 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 24964157  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  24964158 atttttgaaaatgggttttaagaa 24964181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28845345 - 28845123
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28845345 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 28845246  T
Q  101 ggata-aaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    ||||| ||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  28845245 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 28845148  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  28845147 gatttttgaaaatgggttttaagaa 28845123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28853955 - 28853733
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28853955 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 28853856  T
Q  101 ggata-aaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    ||||| ||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  28853855 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 28853758  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  28853757 gatttttgaaaatgggttttaagaa 28853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 31413003 - 31412817
Alignment:
Q  11 ttgcttatttgaaaattattaccta-aaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31413003 ttgcttatttgaaaattattacctagaaaatctaagtgaaagaatgg--ggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaa 31412906  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31412905 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 31412817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 19226014 - 19225795
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19226014 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttgaaaggataaaaa 19225915  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  || |||||||| ||||||||||| ||||| ||||    
T  19225914 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--ttcggtgggttaggttgatttta-atttttgaaa 19225818  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||||||||| ||||||||    
T  19225817 atggttttaagaagagataagag 19225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 33835358 - 33835557
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33835358 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 33835456  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||| ||||  |||||||||||||    
T  33835457 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttttaaaatggttttaa 33835553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 20377884 - 20377683
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  20377884 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttagttatttttatttgatttggaaggataaaaatcctatgcctac 20377786  T
Q  122 ataccctt-nnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggtttta 217  Q
    ||||||||         |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||| |||| |||||||||||||    
T  20377785 atacccttaaagaaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagattttttgaaaatggtttta 20377688  T
Q  218 agaag 222  Q
    |||||    
T  20377687 agaag 20377683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 20386673 - 20386472
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  20386673 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttagttatttttatttgatttggaaggataaaaatcctatgcctac 20386575  T
Q  122 ataccctt-nnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggtttta 217  Q
    ||||||||         |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||| |||| |||||||||||||    
T  20386574 atacccttaaagaaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagattttttgaaaatggtttta 20386477  T
Q  218 agaag 222  Q
    |||||    
T  20386476 agaag 20386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 33844057 - 33844256
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  33844057 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttacttttatttgatttggaaggataaaaatcatatgcctac 33844155  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||| ||||  |||||||||||||    
T  33844156 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttttaaaatggttttaa 33844252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 23039237 - 23039025
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  23039237 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 23039140  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||| ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |    
T  23039139 agtcctctgcctacgtaccattttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttg 23039042  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  23039041 aaaatggttttaagaag 23039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 21931546 - 21931392
Alignment:
Q  80 ttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttg 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||    
T  21931546 ttatttttatttgatttggaaggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgcagttcacctaaaaagtttctttttg 21931447  T
Q  180 gtgggttgg-ttgatttt-agat-tttagaaaatggttttaagaagggataagag 231  Q
    ||||||||| |||||||| | || ||| ||||||||||||||||||  |||||||    
T  21931446 gtgggttggattgattttaatatgttttgaaaatggttttaagaagaaataagag 21931392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 17642593 - 17642395
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  17642593 aaaattattacctaaaaatctaagtgaaagaatggaaggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 17642496  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaag 219  Q
     |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  17642495 gtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaag 17642398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 21850852 - 21851064
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||  | |    
T  21850852 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggaaggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 21850949  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||  | ||||||||||| |||||||||| ||||||| |    
T  21850950 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatt--tatttggtgggttaggttgattttaagatttttg 21851047  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  21851048 aaaatggttttaagaag 21851064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 23348749 - 23348851
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  23348749 ctaaattgatttgcttatttgaaaattactacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaa 23348848  T
Q  101 gga 103  Q
    |||    
T  23348849 gga 23348851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 23984869 - 23984670
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | |  |||| |||||||    
T  23984869 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaggtcctctgcctac 23984772  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-gattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  23984771 gtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttatgatttttgaaaatggttttaa 23984674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 31548260 - 31548472
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |  | |    
T  31548260 atttgcttacttgaaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttgtttttatttgatttggaatg--aca 31548357  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| |||| || |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  31548358 agtcctctgcccacgtacccttttgggacagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttg 31548455  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  31548456 aaaatggttttaagaag 31548472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 21857013 - 21857108
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  21857013 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggaaggagaagaagtatgtttttggttatttttatttgatttggaagga 21857108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 23637455 - 23637375
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23637455 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 23637375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 23827977 - 23828057
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23827977 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 23828057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 23835435 - 23835515
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23835435 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 23835515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 27064197 - 27064117
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27064197 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 26078590 - 26078783
Alignment:
Q  25 attattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacata 124  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||  | || |||| ||||||| ||    
T  26078590 attattacctaaaa-tctaagtgaaaaaatggagggagaagaagtatgtttttggctatttttatttgatttggaagg--acaagtcctctgcctacgta 26078686  T
Q  125 cccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaagaa 221  Q
    |||||        |||||||||||| | |||||||  || || | ||||  ||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  26078687 ccctttttggaaagggatcaaaaccgacgtagttccactcaagaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaagaa 26078783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 26088569 - 26088762
Alignment:
Q  25 attattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacata 124  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||  | || |||| ||||||| ||    
T  26088569 attattacctaaaa-tctaagtgaaaaaatggagggagaagaagtatgtttttggctatttttatttgatttggaagg--acaagtcctctgcctacgta 26088665  T
Q  125 cccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaagaa 221  Q
    |||||        |||||||||||| | |||||||  || || | ||||  ||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  26088666 ccctttttggaaagggatcaaaaccgacgtagttccactcaagaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaagaa 26088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 21858766 - 21858861
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  21858766 atttgcttacttgaaaaattattacctaaaaatttaagtgaaagaatggaaggagaagaagtatgtttttggttatttttatttgatttggaagga 21858861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 26177212 - 26176999
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||  | |    
T  26177212 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaataagtatgttttgggttatttttatttgatttggaagg--aca 26177115  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-tttta 204  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||| ||||     
T  26177114 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttt 26177017  T
Q  205 gaaaatggttttaagaag 222  Q
    ||||||||||||||||||    
T  26177016 gaaaatggttttaagaag 26176999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 21986397 - 21986477
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21986397 aaaattattacttaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 21986477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 21995045 - 21995125
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21995045 aaaattattacttaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 21995125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 36458753 - 36458555
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttgg-ttatttttatttgatttggaaggataaaaatcctatgccta 120  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |  | |||| ||||||    
T  36458753 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggtttatttttatttgatttggaagg--acgagtcctctgccta 36458657  T
Q  121 catacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
    | |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  36458656 cgtacccttttgagaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 36458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 3476994 - 3477074
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3476994 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 3477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 3491764 - 3491844
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3491764 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 3491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 11802591 - 11802655
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11802591 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 11802655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 11812667 - 11812731
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11812667 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 11812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 12170373 - 12170437
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12170373 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 12170437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 12179802 - 12179866
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12179802 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 12179866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 23762511 - 23762615
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||   | || |||| |||||||    
T  23762511 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaaatatgtttttggttatttttatttgatttgaaag--aacaagtcctctgcctac 23762607  T
Q  122 ataccctt 129  Q
    ||||||||    
T  23762608 ataccctt 23762615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 27220387 - 27220451
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27220387 gtctaagtgaaagtatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27220451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 27223394 - 27223458
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27223394 gtctaagtgaaagtatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27223458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 27232865 - 27232929
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27232865 gtctaagtgaaagtatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27232929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 23025833 - 23025917
Alignment:
Q  138 gggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-gattttagaaaatggttttaagaag 222  Q
    ||||| |||||| | |||||||  ||||||| |||||||  |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  23025833 gggattaaaaccgacgtagttccactaaaaaatttcttt--ggtgggttaggttgattttaagatttttgaaaatggttttaagaag 23025917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 6856170 - 6856396
Alignment:
Q  7 tgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6856170 tgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataa 6856269  T
Q  107 aaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-gatttta 204  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||     
T  6856270 aaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttatgattttt 6856369  T
Q  205 gaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||    
T  6856370 gaaaatggttttaagaagggataagag 6856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 24293595 - 24293365
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| ||    
T  24293595 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaacggagagagaagaagtatgtttttggttatttttatttgatttgaaa 24293496  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagat 200  Q
    |||||| |||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24293495 ggataacaatcctctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaat 24293396  T
Q  201 tttagaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||||||    
T  24293395 tttagaaaatggttttaagaagggataagag 24293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 24287027 - 24286797
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||    
T  24287027 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaacggagggagaagaagtatgtttttggttatttttatttgatttgaaa 24286928  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagat 200  Q
    |||||| |||||| |||||||||||| ||        ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  24286927 ggataacaatcctctgcctacatacctttaaagaaaagggatcaaaaccaatatagttcacctaaaaagtttctttttggtgggttggttgattttaaat 24286828  T
Q  201 tttagaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||||||||||    
T  24286827 tttagaaaatggttttaagaagggataagag 24286797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 26896743 - 26896966
Alignment:
Q  9 atttgcttatttgaaaatt-attacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26896743 atttgcttacttgaaaatttattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaa 26896842  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaa 207  Q
    | |||| |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26896843 agtcctctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttaaattttagaa 26896942  T
Q  208 aatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||    
T  26896943 aatggttttaagaagggataagag 26896966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 42247682 - 42247906
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42247682 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 42247781  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    ||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  42247782 ggataaaaatcctatgcatacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaag 42247881  T
Q  199 attttagaaaatg-gttttaagaag 222  Q
    ||||| ||||||| |||||||||||    
T  42247882 atttttgaaaatgagttttaagaag 42247906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17685142 - 17685339
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  17685142 ctaaattgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgaattggaa 17685241  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17685242 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 17685339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 34528053 - 34528288
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34528053 ctaaattgatttgcttatttgaaaattaatacctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 34528152  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-- 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  34528153 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaac 34528252  T
Q  198 gatttt--agaaaatggttttaagaagggataagag 231  Q
     |||||  | |||| |||||||||||||||||||||    
T  34528253 aattttgaaaaaaaaggttttaagaagggataagag 34528288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 34542027 - 34542262
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34542027 ctaaattgatttgcttatttgaaaattaatacctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 34542126  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-- 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  34542127 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaac 34542226  T
Q  198 gatttt--agaaaatggttttaagaagggataagag 231  Q
     |||||  | |||| |||||||||||||||||||||    
T  34542227 aattttgaaaaaaaaggttttaagaagggataagag 34542262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 44375196 - 44374972
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag--tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||||||||| | ||||||||||   |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  44375196 ttgcttatttgaaaactgttacctaaaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 44375097  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttaga 206  Q
    ||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||    
T  44375096 atcatatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttcttttttgtgggttaggttgattttaagatttttga 44374997  T
Q  207 aaatggttttaagaagggataagag 231  Q
    ||||||||||||||| |||||||||    
T  44374996 aaatggttttaagaaaggataagag 44374972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 44390777 - 44390553
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag--tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||||||||| | ||||||||||   |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  44390777 ttgcttatttgaaaactgttacctaaaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 44390678  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttaga 206  Q
    ||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||    
T  44390677 atcatatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttcttttttgtgggttaggttgattttaagatttttga 44390578  T
Q  207 aaatggttttaagaagggataagag 231  Q
    ||||||||||||||| |||||||||    
T  44390577 aaatggttttaagaaaggataagag 44390553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 212
Target Start/End: Complemental strand, 35040096 - 35039894
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  35040096 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagcat-tttttggttatttttatttgatttggaaggataaaaat 35039998  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    |||||||||||||||||||        ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  35039997 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcatctaaaaagtttctttttggtgggttaggttgattttaagatttttgaaa 35039898  T
Q  209 atgg 212  Q
    ||||    
T  35039897 atgg 35039894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35140024 - 35139803
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  35140024 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 35139925  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-g 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||||||||| |    
T  35139924 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttacg 35139827  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  35139826 atttttgaaaatgggttttaagaa 35139803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35148365 - 35148144
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  35148365 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 35148266  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  35148265 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 35148168  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  35148167 atttttgaaaatgggttttaagaa 35148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41232522 - 41232743
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  41232522 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 41232621  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  41232622 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 41232719  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  41232720 atttttgaaaatgggttttaagaa 41232743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42564583 - 42564805
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42564583 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 42564682  T
Q  101 ggat-aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    |||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  42564683 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 42564780  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  42564781 gatttttgaaaatgggttttaagaa 42564805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42573207 - 42573429
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42573207 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 42573306  T
Q  101 ggat-aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    |||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  42573307 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 42573404  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  42573405 gatttttgaaaatgggttttaagaa 42573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 25495982 - 25495773
Alignment:
Q  20 tgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcct 119  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25495982 tgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaagataaaaatcctatgcct 25495883  T
Q  120 acatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaaatggttttaa 218  Q
    ||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| |||||||||||  |||| ||||||||||||||    
T  25495882 acatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgattttaattttttgaaaatggttttaa 25495785  T
Q  219 gaagggataaga 230  Q
    |||| |||||||    
T  25495784 gaagagataaga 25495773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15951705 - 15951929
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15951705 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 15951804  T
Q  101 ggat---aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt 196  Q
    ||||   |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||||||||    
T  15951805 ggataaaaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgatttt 15951902  T
Q  197 -agattttagaaaat-ggttttaagaa 221  Q
     ||||||| |||||| |||||||||||    
T  15951903 aagatttttgaaaatgggttttaagaa 15951929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15943195 - 15943418
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  15943195 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgacttggaa 15943294  T
Q  101 ggat--aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt- 196  Q
    ||||  |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||||||||     
T  15943295 ggataaaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgatttta 15943392  T
Q  197 agattttagaaaat-ggttttaagaa 221  Q
    ||||||| |||||| |||||||||||    
T  15943393 agatttttgaaaatgggttttaagaa 15943418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 26717717 - 26717936
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26717717 ttgcttatttgaaatttattacctaaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttacttgatttggaaggataaaaa 26717816  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| ||||    
T  26717817 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaa 26717913  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||| ||||||||    
T  26717914 atagttttaagaagagataagag 26717936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 26731850 - 26732069
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26731850 ttgcttatttgaaatttattacctaaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttacttgatttggaaggataaaaa 26731949  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| ||||    
T  26731950 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaa 26732046  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||| ||||||||    
T  26732047 atagttttaagaagagataagag 26732069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 20364749 - 20364933
Alignment:
Q  15 ttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcct 113  Q
    ||||||||||||||||||||||||  |||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20364749 ttatttgaaaattattacctaaaaaatctaagtgaaagaatgggaggagaagaagtatgtttttggtcatttttatttgatttggaaggataaaaatcct 20364848  T
Q  114 atgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||        ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  20364849 atgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcaccaaaaaagttactttttggtgggttaggttgatttta 20364933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 20920877 - 20920701
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20920877 atttgcttatttgaaaattattgcctaaacatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggacaaaa 20920778  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt 186  Q
    ||||| | |||||||||||||        |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  20920777 atcctttccctacataccctt-aaagaaagggatcaaaaccaatgtagttcgcctaaaaaatttctttttggtgggtt 20920701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 16274816 - 16274632
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||||||||||    
T  16274816 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggag----aagaagtatgtttttggttatttttatttgatttggaaggataaa 16274721  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||||    
T  16274720 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgatttta 16274632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 16283992 - 16283808
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||||||||||    
T  16283992 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggag----aagaagtatgtttttggttatttttatttgatttggaaggataaa 16283897  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||||    
T  16283896 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgatttta 16283808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 34068895 - 34069095
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   | |||  ||||||     
T  34068895 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggat-tgactcccctgcctat 34068992  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaa 218  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  34068993 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaagatttttgaaaataggttttaa 34069091  T
Q  219 gaag 222  Q
    ||||    
T  34069092 gaag 34069095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 20623692 - 20623528
Alignment:
Q  64 agaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacct 163  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||    
T  20623692 agaagtatgtttttggttatttttatttgatttggaaggataaaaatcccatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacct 20623593  T
Q  164 aaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaagaaggga 225  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||| ||||||||    
T  20623592 aaaaagtttctttttggtgggttaggttgattttaagatttttgaaaatgggtttttagaaggga 20623528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 28481388 - 28481175
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  28481388 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 28481291  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  28481290 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttg 28481193  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  28481192 aaaatgggttttaagaag 28481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 30524734 - 30524943
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttgg-ttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  | ||     
T  30524734 ttgcttatttgaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggtttatttttatttgatttggaagg--acaag 30524831  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaa 207  Q
     ||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |||    
T  30524832 ccctctgcctacgtaccctt-ttgggaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaa 30524928  T
Q  208 aatggttttaagaag 222  Q
    |||||||||||||||    
T  30524929 aatggttttaagaag 30524943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 34685727 - 34685528
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  34685727 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 34685631  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggtttta 217  Q
     |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| |||  |||| |||||||||||||    
T  34685630 gtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttttgaaaatggtttta 34685533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 231
Target Start/End: Original strand, 17095633 - 17095848
Alignment:
Q  10 tttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||| ||   |||||||| || ||| ||| ||||||||||||||||||||||  ||     
T  17095633 tttgcttatttgaaaattattgc-taagagtctaagtgaaagaatggggg---aagaagtatgtcttttgttgtttttatttgatttggaaggat-taac 17095727  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgattttagattttagaaa 208  Q
    || | |||||||||||||||        ||||||||||||||||||||||   |||| | ||||  ||||||||||||| ||||||||| ||||| ||||    
T  17095728 tcttttgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcctgtaaagaatttc--tttggtgggttggattgattttaaatttttgaaa 17095825  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||||||||||||    
T  17095826 attgttttaagaagggataagag 17095848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 21850353 - 21850434
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21850353 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 21850434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 21858788 - 21858869
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21858788 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 21858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 42245591 - 42245376
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  42245591 atttgcttacttgaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 42245495  T
Q  108 aatcctatgcctacataccc----ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agatt 201  Q
    | |||| ||||||| |||||    ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| ||||| |||| |||||    
T  42245494 agtcctctgcctacgtacccctttttttgagaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttggttttaagatt 42245397  T
Q  202 ttagaaaatggttttaagaag 222  Q
    || ||||||||||||||||||    
T  42245396 tttgaaaatggttttaagaag 42245376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 10681540 - 10681635
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10681540 atttgcttacttgaaaaattatcacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 10681635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 21151477 - 21151383
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21151477 atttgcttacttgaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 21151383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 35304743 - 35304648
Alignment:
Q  9 atttgcttatttgaaaatt-attacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35304743 atttgcttacttgaaaatttattacctaaaaatttaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 35304648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 34708149 - 34708069
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34708149 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 34708069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 15600776 - 15600680
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttat-ttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  15600776 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttattttttatttgatttggaagga 15600680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 27681155 - 27681356
Alignment:
Q  22 aaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgccta 120  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| ||||||    
T  27681155 aaaattattaccaaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgccta 27681252  T
Q  121 cataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggtttt 216  Q
    | ||||| ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| |||||| ||||||    
T  27681253 cgtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggtttt 27681350  T
Q  217 aagaag 222  Q
    ||||||    
T  27681351 aagaag 27681356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 31354928 - 31355023
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31354928 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 31355023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22187362 - 22187281
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  22187362 aaaattattacctaaaaatctaagtgaaagaatggagggagcaggagtatgtttttggttatttttatttgatttggaagga 22187281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 42386148 - 42385950
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |  | |||| |||||||    
T  42386148 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctac 42386052  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  42386051 gtaccctttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 42385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 42401032 - 42400834
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |  | |||| |||||||    
T  42401032 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctac 42400936  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  42400935 gtaccctttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 42400838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 11622257 - 11622352
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  11622257 atttgcttacttgaaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttgtttttatttgatttgggagga 11622352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 29855371 - 29855291
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29855371 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 29855291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 33306772 - 33306864
Alignment:
Q  11 ttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  33306772 ttgcttatttgaaaaattattacctgaac-tctaagtgaaagaatggagggagaagaagtatgtttttagttatttttatttgatttggaagga 33306864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 34437119 - 34437039
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34437119 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 34437039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 3755129 - 3755311
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnng 138  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |  | |||| ||||||| |||||||        |    
T  3755129 gtctaaatgaaagaatggagggagaagaagcatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctacgtacccttttgagaaag 3755226  T
Q  139 ggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaagaag 222  Q
    ||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  3755227 ggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagattttttgaaaatggttttaagaag 3755311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 3765180 - 3765362
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnng 138  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |  | |||| ||||||| |||||||        |    
T  3765180 gtctaaatgaaagaatggagggagaagaagcatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctacgtacccttttgagaaag 3765277  T
Q  139 ggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaagaag 222  Q
    ||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  3765278 ggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagattttttgaaaatggttttaagaag 3765362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 2653045 - 2652863
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnng 138  Q
    |||||| |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||  |  | |||| ||||||| |||||||        |    
T  2653045 gtctaaatgaaaggatggagggagaagaagcatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctacgtacccttttgagaaag 2652948  T
Q  139 ggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaagaag 222  Q
    ||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  2652947 ggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagattttttgaaaatggttttaagaag 2652863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 17069159 - 17069301
Alignment:
Q  83 tttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtg 182  Q
    |||||||||||||||||||||| ||  || | | |||||||||||||        |||||||||||||||||||||| | | || | |||||||  ||||    
T  17069159 tttttatttgatttggaaggattaac-tcttttccctacatacccttaaagaaaagggatcaaaaccaatgtagttctcgtgaagaatttcttt--ggtg 17069255  T
Q  183 ggttgg-ttgattttagattttagaaaatggttttaagaagggata 227  Q
    |||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  17069256 ggttggattgattttaaatttttgaaaatggttttaagaagagata 17069301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 17075152 - 17075294
Alignment:
Q  83 tttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtg 182  Q
    |||||||||||||||||||||| ||  || | | |||||||||||||        |||||||||||||||||||||| | | || | |||||||  ||||    
T  17075152 tttttatttgatttggaaggattaac-tcttttccctacatacccttcaagaaaagggatcaaaaccaatgtagttctcgtgaagaatttcttt--ggtg 17075248  T
Q  183 ggttgg-ttgattttagattttagaaaatggttttaagaagggata 227  Q
    |||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  17075249 ggttggattgattttaaatttttgaaaatggttttaagaagagata 17075294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 17069062 - 17069117
Alignment:
Q  10 tttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaag 65  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| || |||||    
T  17069062 tttgcttatttgaaaattattgcctaagagtctaagtgaaagaatgggggaagaag 17069117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 9e-88; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 17529219 - 17529009
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  17529219 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatgg-gggagaagaagtatatttttggttatttttatttgatttggaaggataaaaat 17529121  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 210  Q
    ||||||||| |||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17529120 cctatgcctgcatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaat 17529021  T
Q  211 ggttttaagaag 222  Q
    ||||||||||||    
T  17529020 ggttttaagaag 17529009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 36248896 - 36248683
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  36248896 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgttttttgttatttttatttgatttggaaggataaaaat 36248797  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||| ||||    
T  36248796 cctatgcctacatacccttgaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttaagttgattttaagatttttgaaa 36248697  T
Q  209 atggttttaagaag 222  Q
    ||||||||||||||    
T  36248696 atggttttaagaag 36248683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 26871428 - 26871653
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26871428 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 26871527  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgatttta----gattttag 205  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||      |||| |    
T  26871528 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttggattgattttaatattttttttg 26871627  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||| ||||||||    
T  26871628 aaaatggttttaagaagagataagag 26871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 22103639 - 22103856
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22103639 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttagttttatttgatttggaaggataaa 22103738  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |    
T  22103739 aatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaagttgattttaagatttttg 22103838  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  22103839 aaaatgggttttaagaag 22103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 17662488 - 17662671
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatccta 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  17662488 ttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaaaccta 17662587  T
Q  115 tgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17662588 tgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 17662671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 17681617 - 17681800
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatccta 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  17681617 ttatttgaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaatgataaaaatccta 17681716  T
Q  115 tgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17681717 tgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 17681800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 4837578 - 4837766
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4837578 ttgcttatttgaaaattatcacctaaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaa 4837677  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4837678 tcctatgcctacatacccttacagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 4837766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 17975826 - 17975638
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17975826 ttgcttatctgaaagttattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 17975727  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacct-aaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  17975726 cctatgcctacatacccttaaagaatagggatcaaaaccaatgtagttcacctaaaaaaatttctttttggtgggttaggttgatttta 17975638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30939685 - 30939464
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30939685 ctaaattgatttgcttatttgaaaattattatctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 30939586  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-ag 198  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||    
T  30939585 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaag 30939488  T
Q  199 attttagaaaat-ggttttaagaa 221  Q
    ||||| |||||| |||||||||||    
T  30939487 atttttgaaaatgggttttaagaa 30939464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 19850969 - 19850751
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19850969 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagagagaagaagtatgtttttggttatttttatttgatttggaaggataaa 19850870  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--tttt 203  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||  ||||    
T  19850869 aatcctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgcttttaagatttttt 19850770  T
Q  204 agaaaatggttttaagaag 222  Q
     |||| |||||||||||||    
T  19850769 tgaaattggttttaagaag 19850751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 19857005 - 19856787
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19857005 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagagagaagaagtatgtttttggttatttttatttgatttggaaggataaa 19856906  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--tttt 203  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||  ||||    
T  19856905 aatcctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgcttttaagatttttt 19856806  T
Q  204 agaaaatggttttaagaag 222  Q
     |||| |||||||||||||    
T  19856805 tgaaattggttttaagaag 19856787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 39836217 - 39836439
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39836217 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 39836316  T
Q  101 ggat-aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    |||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  39836317 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 39836414  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  39836415 gatttttgaaaatgggttttaagaa 39836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 39844259 - 39844481
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39844259 ctaaattgatttgcttacttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaa 39844358  T
Q  101 ggat-aaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-a 197  Q
    |||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| |    
T  39844359 ggataaaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaa 39844456  T
Q  198 gattttagaaaat-ggttttaagaa 221  Q
    |||||| |||||| |||||||||||    
T  39844457 gatttttgaaaatgggttttaagaa 39844481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 16775425 - 16775200
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  16775425 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 16775326  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt-ag 205  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||| |     
T  16775325 tcccatgcctacatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaacaattttgaa 16775226  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    |||| |||||||||||||||||||||    
T  16775225 aaaaaggttttaagaagggataagag 16775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 16760988 - 16760763
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  16760988 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 16760889  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt-ag 205  Q
    ||| ||||||| ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||| |     
T  16760888 tcccatgcctatatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaacaattttgaa 16760789  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    |||| |||||||||||||||||||||    
T  16760788 aaaaaggttttaagaagggataagag 16760763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 25585067 - 25585232
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  25585067 ttgcttatttgaaaattattacctaaaaatctaaatgaaagagtggagggagaagaagtatatttttggttatttttatttgatttggaaggataaaaat 25585166  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttcttt 176  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||| | |||||||    
T  25585167 cctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttcttt 25585232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 23923067 - 23923243
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  23923067 atttgcttatttgaaaattattgcctaaaaggtctaagtgaaagaatggagggaggagaaatatgtttttggttatttttatttgatttggaaggataaa 23923166  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtggg 184  Q
    ||| || |||||||||||| ||        ||||||||||||||||||||||| ||||||| | |||||||||||||    
T  23923167 aattctttgcctacataccgttaaaagaaagggatcaaaaccaatgtagttcatctaaaaaatatctttttggtggg 23923243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 36252523 - 36252723
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||   | |||  |||||||    
T  36252523 aaaattattacctaaaaatctaagtgaaagaatggagggagaagtagtatgcttttggttatttttatttgatttggaaggat-tgactcccttgcctac 36252621  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaa 218  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  36252622 atacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaa 36252719  T
Q  219 gaag 222  Q
    ||||    
T  36252720 gaag 36252723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4583763 - 4583602
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  4583763 ctaaattgatttgcttacatgaaaattattacctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 4583664  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacct 163  Q
    ||||   | |||  |||||||||||||||        ||||||||||||||||||||||||||    
T  4583663 ggat-tgactcccctgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacct 4583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 15832099 - 15832007
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  15832099 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaaatatgtttttggttttttttatttgatttggaagga 15832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 23092896 - 23092683
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  23092896 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 23092799  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  |  |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  23092798 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccacacaaaaatttc--tttggtgggttaggttgattttaagatttttg 23092701  T
Q  206 aaaat-ggttttaagaag 222  Q
    ||||| ||||||||||||    
T  23092700 aaaatgggttttaagaag 23092683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 6582905 - 6583102
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  6582905 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 6583002  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga-ttttagaaaatggttttaa 218  Q
     |||||||        |||||||||| | | |||||||  ||||||| ||||||    ||||||| |||||||||| ||| |||| ||||||||||||||    
T  6583003 gtacccttttgggaaagggatcaaaatcgacgtagttccactaaaaaatttctt----gtgggttaggttgattttaagattttttgaaaatggttttaa 6583098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 14204685 - 14204590
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14204685 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 14204590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 14219326 - 14219231
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14219326 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 14219231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 4843023 - 4843121
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4843023 ttgcttatttgaaaattatcacctaaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 4843121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 36576759 - 36576970
Alignment:
Q  11 ttgcttatttgaaa-attattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | ||     
T  36576759 ttgcttatttgaaagattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acaag 36576855  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttag 205  Q
    |||| ||||||| |||||||        |||||||||||||| |||||||  || || | ||||  ||||||||||| |||||||||| |||  |||| |    
T  36576856 tcctctgcctacgtacccttttgggaaagggatcaaaaccaacgtagttccactcaagaatttc--tttggtgggttaggttgattttaagatttttttg 36576953  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  36576954 aaaatggttttaagaag 36576970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 16190620 - 16190700
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16190620 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 16190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22418287 - 22418206
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  22418287 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagga 22418206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 25719192 - 25719112
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25719192 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 25719112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 31000836 - 31000916
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31000836 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 31000916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 26912740 - 26912851
Alignment:
Q  10 tttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||  |||    
T  26912740 tttgcttatttgaaaattattgcctaagagtctaggtgaaagaatgg-gggagaagaagtatgttttt-gttgtttttatttgatttggaaggat--aaa 26912835  T
Q  110 tcctatgcctacatac 125  Q
    |||| |||||||||||    
T  26912836 tcctttgcctacatac 26912851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 31207712 - 31207807
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  31207712 atttgcttacttgaaaaattattacctaaaaatctatgtaaaagaatggagggggaagaagtatgtttttggttatttttatttgatttggaagga 31207807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 17129454 - 17129388
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttattttta 88  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17129454 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttattttta 17129388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 22366956 - 22367038
Alignment:
Q  22 aaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  22366956 aaaattattacctaaaaaatctaagtaaaagaatggagagagaagaattatgtttttggttatttttatttgatttggaagga 22367038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 221
Target Start/End: Complemental strand, 17129388 - 17129235
Alignment:
Q  67 agtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaa 166  Q
    |||| |||||||||||||||||||||||||||||||  | || | || ||||||| |||||||        |||||||||||| | |||||||  || ||    
T  17129388 agtatgtttttggttatttttatttgatttggaagg--acaagttctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaa 17129291  T
Q  167 aagtttctttttggtgggtt-ggttgatttt-agattttagaaaat-ggttttaagaa 221  Q
    || ||||  ||||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  17129290 aaatttc--tttggtgggttaggttgattttaagatttttgaaaatgggttttaagaa 17129235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 35 - 231
Target Start/End: Original strand, 38672 - 38868
Alignment:
Q  35 aaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttnnnnn 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  38672 aaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctacatacccttaaaga 38771  T
Q  135 nnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaaatggttttaagaagggataagag 231  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38772 aaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgactttagattttagaaaatagttttaagaagggataagag 38868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 30072 - 29851
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag--tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  30072 ttgcttatttgaaaattattacctaaaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 29973  T
Q  109 atcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaaa 208  Q
    ||||| |||||||||||||||        ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29972 atcctctgcctacataccctt-aaagaaagggatcaaaaccaatgaggttcacctaaaaagtttctttttggtgggttggttgattttatattttagaaa 29874  T
Q  209 atggttttaagaagggataagag 231  Q
    |||||||||||||||||||||||    
T  29873 atggttttaagaagggataagag 29851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 18303068 - 18303265
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  18303068 ctaaattgatttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggaggaagaagaagtatgtttttggttatttttatttgatttggaa 18303167  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18303168 ggataaaaatcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 18303265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 10442350 - 10442175
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442350 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 10442251  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgatttta 197  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442250 atacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgatttta 10442175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 4661900 - 4662077
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  4661900 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgttttttgttatttttatttgatttggaaggataaaaat 4661999  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg 188  Q
     ||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4662000 tctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaatttctttttggtgggttgg 4662077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 13832897 - 13832687
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  13832897 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggtta-ttttatttgatttggaaggataaaaat 13832799  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| ||||    
T  13832798 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaa 13832701  T
Q  209 at-ggttttaagaa 221  Q
    || |||||||||||    
T  13832700 atgggttttaagaa 13832687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 13840927 - 13840717
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  13840927 ttgcttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggtta-ttttatttgatttggaaggataaaaat 13840829  T
Q  111 cctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaa 208  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| ||||    
T  13840828 cctatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaa 13840731  T
Q  209 at-ggttttaagaa 221  Q
    || |||||||||||    
T  13840730 atgggttttaagaa 13840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 24186144 - 24186363
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24186144 ttgcttatttgaaatttattacctaaaaaatctaagtgaaagaatgggggaagaagaagtatgtttttggttatttttacttgatttggaaggataaaaa 24186243  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| ||||    
T  24186244 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaa 24186340  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||| ||||||||    
T  24186341 atagttttaagaagagataagag 24186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 10449467 - 10449321
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10449467 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 10449368  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaa 168  Q
    ||||||||        |||||||||||||||||||||||||||||||    
T  10449367 atacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaa 10449321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 1886949 - 1887165
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| ||   |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1886949 ttgcttatttgaaatttattacctaaaaaatctaagtgaaagaatggggg---aagaagtatgtttttggttatttttacttgatttggaaggataaaaa 1887045  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| ||||    
T  1887046 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaa 1887142  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||| ||||||||    
T  1887143 atagttttaagaagagataagag 1887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 1901050 - 1901266
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| ||   |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1901050 ttgcttatttgaaatttattacctaaaaaatctaagtgaaagaatggggg---aagaagtatgtttttggttatttttacttgatttggaaggataaaaa 1901146  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaa 208  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||||||||| ||||| ||||    
T  1901147 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgatttta-atttttgaaa 1901243  T
Q  209 atggttttaagaagggataagag 231  Q
    || ||||||||||| ||||||||    
T  1901244 atagttttaagaagagataagag 1901266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 5199207 - 5199407
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5199207 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 5199305  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggtttta 217  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||| |||  |||| |||||||||||||    
T  5199306 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttggttttaagatttttttgaaaatggtttta 5199402  T
Q  218 agaag 222  Q
    |||||    
T  5199403 agaag 5199407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 5208324 - 5208524
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5208324 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 5208422  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-aga--ttttagaaaatggtttta 217  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||| |||  |||| |||||||||||||    
T  5208423 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttggttttaagatttttttgaaaatggtttta 5208519  T
Q  218 agaag 222  Q
    |||||    
T  5208520 agaag 5208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 17739396 - 17739573
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |    
T  17739396 atttgcttatttgaaaattattgcctaaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggat-ta 17739494  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt 186  Q
    | |||| | |||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17739495 actccttttcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctaaaaaagttctttttggtgggtt 17739573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 4940308 - 4940401
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4940308 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggat 4940401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 17211435 - 17211223
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |      
T  17211435 atttgcttacttgaaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga-atg 17211337  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  |||||||||||||||         ||||||||||| ||||||||||||| |||| ||||  |||||||| || |||||||||| ||||||| |    
T  17211336 attcccctgcctacatacccttgaagaaac-ggatcaaaacccatgtagttcacctcaaaaatttc--tttggtggattaggttgattttaagatttttg 17211240  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  17211239 aaaatggttttaagaag 17211223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16909841 - 16910061
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||||| ||||||||| ||||||||| ||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  16909841 ctaaaatcatttgcttacttgaaaattgttagctaaaaatctaagtgaaagagtggagggggaagaagtatgtttttggttatttttatttgatttggaa 16909940  T
Q  101 ggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta-g 198  Q
    ||  | || |||| ||||||| |||||||        |||||||||||| | ||||||| ||| |||| ||||  ||||||||||| ||||||||||| |    
T  16909941 gg--acaagtcctttgcctacgtacccttttgggaaagggatcaaaaccgacgtagttcccctcaaaaatttc--tttggtgggttaggttgattttatg 16910036  T
Q  199 attttagaaaat-ggttttaagaag 222  Q
    ||||| |||||| ||||||||||||    
T  16910037 atttttgaaaataggttttaagaag 16910061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 16227885 - 16227686
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  16227885 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 16227788  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  16227787 gtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 16227690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 16244763 - 16244564
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | || |||| |||||||    
T  16244763 aaaattattacctaaaaatctaagtgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagg--acaagtcctctgcctac 16244666  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  ||||||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  16244665 gtaccctttttgggaaagggatcaaaaccgacgtagttccactaaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 16244568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 40680110 - 40679896
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  40680110 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--aca 40680013  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtggg-ttggttgatttt-aga--tttt 203  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||| | |||||||||| |||  ||||    
T  40680012 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggctaggttgattttaagatttttt 40679915  T
Q  204 agaaaatggttttaagaag 222  Q
     ||||||||||||||||||    
T  40679914 tgaaaatggttttaagaag 40679896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 29023548 - 29023465
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataa 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29023548 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataa 29023465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 29031986 - 29031903
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataa 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29031986 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataa 29031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 29082117 - 29082024
Alignment:
Q  11 ttgcttatttgaaaa--ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29082117 ttgcttatttgaaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 29082024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 29096876 - 29096783
Alignment:
Q  11 ttgcttatttgaaaa--ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29096876 ttgcttatttgaaaaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 29096783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 16545601 - 16545389
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||  | |    
T  16545601 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttctgattatttttatttgatttggaagg--aca 16545504  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| | ||||  |    
T  16545503 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaatatttctg 16545406  T
Q  206 aaaatggttttaagaag 222  Q
    |||||| ||||||||||    
T  16545405 aaaatgtttttaagaag 16545389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 16620061 - 16620273
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||  | |    
T  16620061 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttctgattatttttatttgatttggaagg--aca 16620158  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| | ||||  |    
T  16620159 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaatatttctg 16620256  T
Q  206 aaaatggttttaagaag 222  Q
    |||||| ||||||||||    
T  16620257 aaaatgtttttaagaag 16620273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 16120725 - 16120805
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16120725 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 16120805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 16147465 - 16147545
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16147465 aaaattattacctaaaa-tctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 16147545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 43600734 - 43600636
Alignment:
Q  10 tttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacg-tttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||    
T  43600734 tttgcttatttgaaaattattgcctaagagtctaggtgaaagaatggagggagaagaagtatgtttttttgttgtttttatttgatttggaaggataaa 43600636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 16889778 - 16889976
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |  | |||| |||||||    
T  16889778 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acgagtcctctgcctac 16889874  T
Q  122 ataccc-ttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaa 218  Q
     ||||| ||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  16889875 gtaccctttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttgaaaatggttttaa 16889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 27965985 - 27966065
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27965985 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27966065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 27975438 - 27975518
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27975438 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 27975518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 15185657 - 15185593
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15185657 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 15185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 15200277 - 15200213
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15200277 gtctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 15200213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 558483 - 558563
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  558483 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaagga 558563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 568393 - 568473
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  568393 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaagga 568473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 2549080 - 2549000
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  2549080 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaagga 2549000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 2562966 - 2562886
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  2562966 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaagga 2562886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 17514376 - 17514456
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17514376 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatggttttggttatttttatttgatttggaagga 17514456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 17538838 - 17538758
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17538838 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatggttttggttatttttatttgatttggaagga 17538758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 27435382 - 27435300
Alignment:
Q  22 aaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  27435382 aaaattattacctaaaaaatctaagtaaaagaatggagagagaagaattatgtttttggttatttttatttgatttggaagga 27435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 27444412 - 27444330
Alignment:
Q  22 aaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  27444412 aaaattattacctaaaaaatctaagtaaaagaatggagagagaagaattatgtttttggttatttttatttgatttggaagga 27444330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 44075242 - 44075322
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  44075242 aaaattattgcctaat-gtctgagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttgggagga 44075322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 4323947 - 4323863
Alignment:
Q  10 tttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatt 95  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||| || ||||||||||||| |||||| ||| |||||||||||||    
T  4323947 tttgcttatttgaaaattattgcctaagagtctagatgaaagaaaggggggagaagaagtatgttttt-gttgtttttatttgatt 4323863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 36476818 - 36476884
Alignment:
Q  39 gtctaagtgaaagaatggagggagaagaagtacgtttt-tggtta-tttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||    
T  36476818 gtctaagtgaaagaatggagggagaagaagtatgttttgttgttattttttatttgatttggaagga 36476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 33533462 - 33533599
Alignment:
Q  93 atttggaaggataaaaatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttg 191  Q
    |||||||||||| ||  |||| |||||||||||||||        |||||||||||||||||||||| |||||  | ||||  ||||||||||||| |||    
T  33533462 atttggaaggattaac-tcctttgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcccctaaggaatttc--tttggtgggttggattg 33533558  T
Q  192 attttag-attttagaaaatggttttaagaagggataagag 231  Q
    ||||||| | ||| ||||||||||| |||||| ||||||||    
T  33533559 attttagaagttttgaaaatggtttgaagaagagataagag 33533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 19384138 - 19384185
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagta 70  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  19384138 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagta 19384185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 188716 - 188494
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  188716 atttgctaacttgaaaattattacctaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgttttggaaagataaa 188617  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttggttgattttagattttagaa 207  Q
    |||||  |||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  188616 aatcccttgcctacatacccttaaagaaaatggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttcgttgattttaaattttagaa 188517  T
Q  208 aatggttttaagaagggataaga 230  Q
    ||| |||||||||||||||||||    
T  188516 aatagttttaagaagggataaga 188494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 194906 - 194811
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  194906 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 194811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 159234 - 159154
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  159234 aaaattattgcctaat-gtctaagtgaaagaatggagggagaagaagtatgcttttggttatttttatttgatttggaagga 159154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 4543 - 4331
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4543 ttgcttatttgaaaattattacctaaaaaatctaagtgaaagaatggggggagaaaaagtatgtttttggttatttttatttgatttggaaggataaaaa 4444  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gattttaga 206  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||| |||| ||||  |||| |||||| |||||||||||   ||||| ||    
T  4443 tcctatgcctacatacccttaaagaaaagggatcaaaaccaatgtagttcacctcaaaaatttc--tttgatgggttaggttgattttaagaatttttga 4346  T
Q  207 aaatggttttaagaa 221  Q
    |||||||||||||||    
T  4345 aaatggttttaagaa 4331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 10328 - 10140
Alignment:
Q  11 ttgcttatttgaaaattat-tacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaa 109  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |||    
T  10328 ttgcttatttgaaaattaactacctaaaaatctaagtgaaagaatgggggaagaagaagcatgtttttggttatttttatttgatttggaaggatacaaa 10229  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10228 tcccatgcctacatacccttgaagagaagggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgatttta 10140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1804 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold1804
Description:

Target: scaffold1804; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 142 - 24
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaat 110  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  142 ttgcttatttgaaaattattacctaaaaatctaagtgaatgaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggataaaaat 43  T
Q  111 cctatgcctacataccctt 129  Q
    |||||||||||||||||||    
T  42 cctatgcctacataccctt 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 109540 - 109317
Alignment:
Q  11 ttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggata-aaaa 109  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |  ||||| |||||||||||||| ||| |||||||| ||||    
T  109540 ttgcttatttgaaaattattacctaaaaatctgagtgaaagaatggagggagaagaagcattttttttgttatttttatttggttttgaaggataaaaaa 109441  T
Q  110 tcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta--gatttt-ag 205  Q
    || |||||||||||||||||        ||||||||||||||||||||||||||||| | ||||  ||||||||||| |||||||||||   ||||| |     
T  109440 tcatatgcctacataccctttaagaaaagggatcaaaaccaatgtagttcacctaaagaatttc--tttggtgggttaggttgattttaacaattttgaa 109343  T
Q  206 aaaatggttttaagaagggataagag 231  Q
    |||| |||||||||||||||||||||    
T  109342 aaaaaggttttaagaagggataagag 109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 10014 - 10226
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||       
T  10014 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggctatttttatttgatttggaaggat-tg 10112  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||  |||||||||||||||         ||||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  10113 actcccttgcctacatacccttaaagaaaaaggatcaaaaccaatgtagttcacctcaaaaatttc--tttggtgggttaggttgattttaagatttttg 10210  T
Q  206 aaaatggttttaagaa 221  Q
    ||||||||||||||||    
T  10211 aaaatggttttaagaa 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 19955 - 19766
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       
T  19955 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggat-tg 19857  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttta 197  Q
    | |||  |||||||||||||||        |||||||| ||||||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  19856 actcccttgcctacatacccttaaagaaaagggatcaacaccaatgtagttcacctaaaaaaattctttttggtgagttgggttgatttta 19766  T

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Target: scaffold0077 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 32573 - 32399
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||   | |||  |||||||    
T  32573 aaaattattacctaaaaatctaagtgaaagaatggagggagaataagtatgtttttggttatttttatttgatttggaaggat-tgactcccttgcctac 32475  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgatttta 197  Q
    ||||||||        |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  32474 ataccctt-aaagaaagggatcaaaaccaatgtagttcacctcaaaaatttctttttggtgggttggattgatttta 32399  T

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Target: scaffold0357 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 4415 - 4297
Alignment:
Q  9 atttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaa 108  Q
    ||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4415 atttgcttacttaaaaattattacctaaaaatctaagtgaaagaatggggggagaagaagtatgtttttggttatttttatttgatttggaaggataaaa 4316  T
Q  109 atcctatgcctacataccc 127  Q
    ||||| ||||||| |||||    
T  4315 atcctttgcctacgtaccc 4297  T

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Target: scaffold0278 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 10556 - 10404
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaaaatcctatgcctac 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||| |||||||    
T  10556 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaaggat-taactcctttgcctac 10458  T
Q  122 atacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttcttt 176  Q
    ||||||||        ||||||||||||||||||| | |||||||||||||||||    
T  10457 ataccctt-aaggaaagggatcaaaaccaatgtagcttacctaaaaagtttcttt 10404  T

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Target: scaffold0043 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 63376 - 63164
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaaggataaa 107  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |      
T  63376 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagg--acg 63279  T
Q  108 aatcctatgcctacatacccttnnnnnnnngggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttag 205  Q
    | |||| ||||||| |||||||        |||||||||||| | |||||||  || |||| ||||  ||||||||||| |||||||||| ||||||| |    
T  63278 agtcctctgcctacgtacccttttgggaaagggatcaaaaccgacgtagttccactcaaaaatttc--tttggtgggttaggttgattttaagatttttg 63181  T
Q  206 aaaatggttttaagaag 222  Q
    |||||||||||||||||    
T  63180 aaaatggttttaagaag 63164  T

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Target: scaffold0044 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 80553 - 80648
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  80553 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 80648  T

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Target: scaffold0044; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 64152 - 64246
Alignment:
Q  10 tttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||| ||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||    
T  64152 tttgcttacttgaaaaattattacctaaaaatctaactgaaagaatggaggaagaagaagtatatttttggttatttttatttgatttggtagga 64246  T

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Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 46678 - 46759
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46678 aaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 46759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 160 - 248
Alignment:
Q  15 ttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  160 ttatttgaaaattattacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttattttttattgatttggaagga 248  T

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Target: scaffold0545 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 8035 - 8130
Alignment:
Q  138 gggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgatttt-agattttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||    
T  8035 gggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttaggttgattttaagatttttgaaaatggttttaagaaaggataagag 8130  T

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Target: scaffold0031 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 508 - 603
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  508 atttgcttacttgaaaaattattacctaaaaatctaagtgaatgaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 603  T

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Target: scaffold0155 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21658 - 21760
Alignment:
Q  1 ctaaaatgatttgcttatttgaaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaa 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||||| |    
T  21658 ctaaattgatttgcttacttgaaaattattacctaaaaatctaaatgaaagaatggaggaagaagaagcatgtttttggttatttttatttgatttggga 21757  T
Q  101 gga 103  Q
    |||    
T  21758 gga 21760  T

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Target: scaffold1481 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1481
Description:

Target: scaffold1481; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 1631 - 1550
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1631 aaaattaatacctaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 4684 - 4588
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggaggg-agaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  4684 atttgcttacttgaaaaattattacctaaaaatctaagtgaaagaatggaggggagaagaagtatgtttttggttatttttatttgatttggaagga 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 83576 - 83481
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  83576 atttgcttacttgaaaaattattacctaaaaatctaagtaaaaaaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 83481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 12749 - 12655
Alignment:
Q  138 gggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggtt-ggttgattttagattttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||| |||||||||||||||||| ||||||||    
T  12749 gggatcaaaaccaatgtagttcacctaaaaagtttttttttggtgggttaggttgattttaattttttgaaaatggttttaagaagagataagag 12655  T

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Target: scaffold0455 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 3801 - 3882
Alignment:
Q  22 aaaattattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3801 aaaattattacctaaaaatctaaatgaaagaatggagggagaaggagtatgtttttggttatttttatttgatttggaagga 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 145509 - 145591
Alignment:
Q  22 aaaattattacctaaaagt-ctaagtgaaagaatggagggagaagaagtacgtttttggttatttttatttgatttggaagga 103  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  145509 aaaattattacctaaaaaagctaagtgaaagaatggagggagaagaagtatgtttttggttatttttatttgatttggaagga 145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 136533 - 136617
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaag-tctaagtgaaagaatggagggagaagaagtacgtttttggttatttttattt 91  Q
    ||||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  136533 atttgcttacttgaaaaattattacctaaaaaatctaagtgaaagaatggagggagaagaagtatgtttttggttatatttattt 136617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 15021 - 14925
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaagaagtacgtttttggtt-atttttatttgatttggaagga 103  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||    
T  15021 atttgcttacttgaaaaattattacctaaaaatctaagtaaaagaatggagggagaagaagtatgtttttggttgttttttatttgatttgggagga 14925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 19427 - 19519
Alignment:
Q  138 gggatcaaaaccaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgattttagattttagaaaatggttttaagaagggataagag 231  Q
    |||||||||||||||||||||| |||||| | ||||  ||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||||||||    
T  19427 gggatcaaaaccaatgtagttcccctaaagaatttc--tttggtgggttggattgattttaaatttttgaaattggttttaagaagagataagag 19519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 26354 - 26437
Alignment:
Q  147 accaatgtagttcacctaaaaagtttctttttggtgggttgg-ttgattttagattttagaaaatggttttaagaagggataagag 231  Q
    ||||||||||||| |||||| | |||||||  |||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||    
T  26354 accaatgtagttcccctaaagaatttcttt--ggtgggttggattgattttaaatttttgaaaatggttttaagaagagataagag 26437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 22924 - 22980
Alignment:
Q  9 atttgcttatttgaaaa-ttattacctaaaagtctaagtgaaagaatggagggagaag 65  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  22924 atttgcttacttgaaaaattattacctaaaa-tctaagtgaaagaatggagggagaag 22980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1547 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1547
Description:

Target: scaffold1547; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 1662 - 1633
Alignment:
Q  74 ttttggttatttttatttgatttggaagga 103  Q
    ||||||||||||||||||||||||||||||    
T  1662 ttttggttatttttatttgatttggaagga 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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