View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21310_low_7 (Length: 220)
Name: NF21310_low_7
Description: NF21310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21310_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 23 - 203
Target Start/End: Original strand, 21601781 - 21601961
Alignment:
| Q |
23 |
gctgtgatgtataatcagaattgaattacatgattataaatatttatgtgttttactaattatcgaataaacaatcatatcaagaagatgattgaataaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21601781 |
gctgtgatgtataatcagaattgaattacatgattataaatatttatgtgttttactaattatcgaataaacaatcatatcaagaagatgattgaataaa |
21601880 |
T |
|
| Q |
123 |
ctaaataagaaacatcatcctcaaaacttttattttcacgttgaagaaggttatatatatcaagtatacatgttcatctca |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21601881 |
ctaaataagaaacatcatcctcaaaacttttattttcacgttgaagaaggttatatatatcaagtatacatgttcatctca |
21601961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University