View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21313_high_3 (Length: 243)
Name: NF21313_high_3
Description: NF21313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21313_high_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 38840954 - 38841191
Alignment:
| Q |
6 |
aggcccaaccgagactccaaaaactaaattgaaatagtaatttctttctaaaaaccaatttctgaaatgttttaatacatgtagaagcacaacttaacat |
105 |
Q |
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| T |
38840954 |
aggcccaaccgagactccaaaaactaaattgaaatagtaatttctttctaaaaaccaatttctaaaatgttttaatacatgtagaagcacaacttaacat |
38841053 |
T |
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| Q |
106 |
gttataaatatgttgtaaatcattttgctagcattatcatgtagtaaaaatatgttgtaaccatcttgtgtctcaagtagtaccatgttatttccaacac |
205 |
Q |
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| T |
38841054 |
gttataaatatgttgtaaatcattttgctagcattatcatgtagtaaaaatatgttgtaaccatcttgtgtctcaagtagtaccatgttatttccaacac |
38841153 |
T |
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| Q |
206 |
caaataattgatgcgaagagggtagcaacattgctgct |
243 |
Q |
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| T |
38841154 |
caaataattgacgcgaagagggtagcaacattgctgct |
38841191 |
T |
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