View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21313_high_7 (Length: 213)
Name: NF21313_high_7
Description: NF21313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21313_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 4578853 - 4579034
Alignment:
| Q |
17 |
cagtctataccagttgttcaaccatggtcggttataagtctgtcagaacctcattcaaccatggtttgttcaaccgaatcattgttttttagaatgttca |
116 |
Q |
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| T |
4578853 |
cagtctataccggttgttcaaccatggtcggttataagtctgtcagaacctcattcaaccatggtttattcaaccgaatcattgttttttcgaatgttca |
4578952 |
T |
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| Q |
117 |
tacatatttcgggaaatattctttaattcctggatatgaaagacaaccaaaatctcatattagtttcattcatggtcctatg |
198 |
Q |
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| T |
4578953 |
tacatatttcgggaaatattctttaattcctggatatgaaagacaaccaaaatctcatattagttttattcatggtcctatg |
4579034 |
T |
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