View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21315_high_11 (Length: 348)

Name: NF21315_high_11
Description: NF21315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21315_high_11
NF21315_high_11
[»] chr5 (17 HSPs)
chr5 (18-338)||(8547751-8548071)
chr5 (18-110)||(8535645-8535737)
chr5 (18-338)||(1599941-1600260)
chr5 (156-266)||(8644488-8644598)
chr5 (18-300)||(8529087-8529360)
chr5 (18-97)||(9074606-9074685)
chr5 (156-266)||(8637143-8637253)
chr5 (131-300)||(9074409-9074578)
chr5 (156-206)||(2904783-2904833)
chr5 (234-300)||(8535858-8535924)
chr5 (156-210)||(8678090-8678144)
chr5 (18-46)||(2844997-2845025)
chr5 (18-46)||(2856824-2856852)
chr5 (18-46)||(2874434-2874462)
chr5 (281-338)||(2904644-2904705)
chr5 (64-100)||(2904878-2904914)
chr5 (61-97)||(9003647-9003683)
[»] chr6 (2 HSPs)
chr6 (157-338)||(16716647-16716832)
chr6 (18-105)||(16716490-16716577)
[»] chr7 (2 HSPs)
chr7 (18-300)||(48361535-48361814)
chr7 (22-107)||(35779976-35780061)
[»] scaffold0627 (2 HSPs)
scaffold0627 (157-337)||(4948-5130)
scaffold0627 (18-105)||(4791-4878)
[»] chr4 (1 HSPs)
chr4 (18-300)||(9443248-9443521)
[»] chr1 (1 HSPs)
chr1 (132-203)||(5131022-5131093)


Alignment Details
Target: chr5 (Bit Score: 289; Significance: 1e-162; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 338
Target Start/End: Complemental strand, 8548071 - 8547751
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcgca 117  Q
    |||||| |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8548071 atattcgttcataacccacattgtaacataagagagatagttccagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcaca 8547972  T
Q  118 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8547971 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 8547872  T
Q  218 tttccttaaatcggatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccactgagttctccatgttggt 317  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  8547871 tttccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccacttatttctccatgttggt 8547772  T
Q  318 gttccgagtgtgtgtatctca 338  Q
    |||||||||||||||||||||    
T  8547771 gttccgagtgtgtgtatctca 8547751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 8535645 - 8535737
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtct 110  Q
    ||||||||||||||||||||||| ||||| ||| ||| || |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  8535645 atattcattcataacccacattgaaacatcagataaaaaggtcgaatcacaaatgtaaagaaatccctttaattctcccatgctaatatgtct 8535737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 338
Target Start/End: Complemental strand, 1600260 - 1599941
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcgca 117  Q
    |||||| |||||||||||||||| ||||| ||| ||| || |  ||||||||||||||||| |||||||||||||||||| ||||| | | ||  |   |    
T  1600260 atattccttcataacccacattggaacatcagataaaaaggt--agtcacaaatgtaaagaaatccctttaattctcccatgctaacatggctgtt---a 1600166  T
Q  118 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 217  Q
    |||| |  | |  ||||||||||| ||||| ||  || ||||||||||||||| || |||||||| ||||||||||| |||  |||||| |||  |  |     
T  1600165 ccacaagttccattattatgatttccaaactcatgtggaggagaaggaaatgactgcaacctctcactttcaaaacagaaaaccaatattgacatttgct 1600066  T
Q  218 tttccttaaatcggatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact----gagttctccatgt 313  Q
       ||| | |||  |||||||||||||||| | ||||||||||||||| | ||||     || ||||||||||||||||||||     | ||||||| |     
T  1600065 caccctcatatcttatccaatgaagtgcaccattcacacaagtgggattcttaagcatccaaaaagaaatttgaggatccacttcaacatttctccagga 1599966  T
Q  314 tggtgttccgagtgtgtgtatctca 338  Q
    ||||||||| ||||||| |||||||    
T  1599965 tggtgttccaagtgtgtttatctca 1599941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 8644488 - 8644598
Alignment:
Q  156 aggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcggatccaatgaagtgcacgagtcaca 255  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| | |    |||| ||||| |||||||||||| |||| | | |||    
T  8644488 aggagaaggaaatgattgcaacctctcactttcaaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaaca 8644587  T
Q  256 caagtgggata 266  Q
     ||||||||||    
T  8644588 taagtgggata 8644598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 8529087 - 8529360
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcgca 117  Q
    ||||||||||||||||||||||| ||||| ||| | | || |||  ||||||||||| ||| |||||||||||||||||| ||||||| | || |    |    
T  8529087 atattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctac---aa 8529183  T
Q  118 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 217  Q
    | |  |||      |||||||||| ||||||||  || |||||||||||| || || ||||||||  ||||||| || |||  |||||| |||| |  |     
T  8529184 caaaaaac------attatgatttccaaacacatgtggaggagaaggaaacgactgcaacctctcattttcaaagcagaaaaccaatattgacctttgct 8529277  T
Q  218 tttccttaaatcggatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact 300  Q
       ||| |||||  |||||||||||||||| | ||||||||||||||||| | |||   ||| ||||||||||||||||||||    
T  8529278 gaccctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactttagactcgaaaaagaaatttgaggatccact 8529360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 9074685 - 9074606
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctccca 97  Q
    |||||||||||||||||||| || ||||| ||| ||| |  || ||||||||||||||||| ||||||||||||||||||    
T  9074685 atattcattcataacccacactgaaacatcagataaaaatgtccagtcacaaatgtaaagaaatccctttaattctccca 9074606  T

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Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 8637143 - 8637253
Alignment:
Q  156 aggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcggatccaatgaagtgcacgagtcaca 255  Q
    |||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||| | |     ||||||||| |||||||||||  | || | |||||    
T  8637143 aggagaaggaaatgattgcaacctctcattttctaaacagaaacacaatatagacctttcttgacccttaaatctgatccaatgaatcgtaccattcaca 8637242  T
Q  256 caagtgggata 266  Q
    |||||||||||    
T  8637243 caagtgggata 8637253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 9074578 - 9074409
Alignment:
Q  131 tattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcg 230  Q
    ||||||| ||| ||||||||   | ||||||||||||||| || |||||||| ||||||||||| ||| ||||||| |||| |  |   |  | | |||     
T  9074578 tattatggtttccaaacacatgcggaggagaaggaaatgactgcaacctctcactttcaaaacagaaaaacaatattgacctttgctgattttcatatct 9074479  T
Q  231 gatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact 300  Q
     |||||||||||||||| | |||||||||||||||||   |||    || ||||||||||||||||||||    
T  9074478 tatccaatgaagtgcaccattcacacaagtgggatactcgagactcaaaaaagaaatttgaggatccact 9074409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 2904833 - 2904783
Alignment:
Q  156 aggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatat 206  Q
    |||||||||||||||||| | |||||| ||||||||||  |||||||||||    
T  2904833 aggagaaggaaatgattgcatcctctcactttcaaaactgaaacacaatat 2904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8535858 - 8535924
Alignment:
Q  234 ccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact 300  Q
    |||||| ||||||| | ||||||||||||||||| | |||   ||| ||||||||||||||||||||    
T  8535858 ccaatgtagtgcaccattcacacaagtgggatactttagactcgaaaaagaaatttgaggatccact 8535924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 8678090 - 8678144
Alignment:
Q  156 aggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagac 210  Q
    |||||||||||||||||| ||| ||||  |||| ||||| |||||||||||||||    
T  8678090 aggagaaggaaatgattgcaacttctcagtttctaaacagaaacacaatatagac 8678144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 2845025 - 2844997
Alignment:
Q  18 atattcattcataacccacattgtaacat 46  Q
    |||||||||||||||||||||||||||||    
T  2845025 atattcattcataacccacattgtaacat 2844997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 2856852 - 2856824
Alignment:
Q  18 atattcattcataacccacattgtaacat 46  Q
    |||||||||||||||||||||||||||||    
T  2856852 atattcattcataacccacattgtaacat 2856824  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 2874462 - 2874434
Alignment:
Q  18 atattcattcataacccacattgtaacat 46  Q
    |||||||||||||||||||||||||||||    
T  2874462 atattcattcataacccacattgtaacat 2874434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 2904705 - 2904644
Alignment:
Q  281 aagaaatttgaggatccact----gagttctccatgttggtgttccgagtgtgtgtatctca 338  Q
    ||||||||||||||||||||    || ||||||||| || ||||||||| ||||||||||||    
T  2904705 aagaaatttgaggatccacttcaagatttctccatgatgttgttccgagcgtgtgtatctca 2904644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 2904914 - 2904878
Alignment:
Q  64 tcacaaatgtaaagacatccctttaattctcccaagc 100  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  2904914 tcacaaatgtaaagaaatcccttcaattctcccaagc 2904878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 9003647 - 9003683
Alignment:
Q  61 gagtcacaaatgtaaagacatccctttaattctccca 97  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  9003647 gagtcacaaatgtaaagaaatccccttaattctccca 9003683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 157 - 338
Target Start/End: Original strand, 16716647 - 16716832
Alignment:
Q  157 ggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcggatccaatgaagtgcacgagtcacac 256  Q
    |||||||||||||| || ||| |||| |||||||||||||||||||||||||||  | ||||| ||| ||||  || |||||||||||||| | ||||||    
T  16716647 ggagaaggaaatgaatgcaacttctcactttcaaaacaaaaacacaatatagacatttcccttccctcaaatgtgaaccaatgaagtgcaccattcacac 16716746  T
Q  257 aagtgggatacataagataagaagaagaaatttgaggatccac--tg--agttctccatgttggtgttccgagtgtgtgtatctca 338  Q
    ||||||||| ||||||| | ||| | |||||||||||||||||  ||  | |||||||||||||||||||||||||||||||||||    
T  16716747 aagtgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttggtgttccgagtgtgtgtatctca 16716832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16716490 - 16716577
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaata 105  Q
    ||||||||||||||||||||||||||||||   |||  |||| |||||| ||||||| ||| |||||||||||||||||| |||||||    
T  16716490 atattcattcataacccacattgtaacatattcgaagaagtttgagtcagaaatgtatagaaatccctttaattctcccatgctaata 16716577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 48361814 - 48361535
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcgca 117  Q
    ||||||||||||||||||||||| ||||| |||   | || |||||||||||||||||||| |||||||||||||||||| ||||||| | ||  |   |    
T  48361814 atattcattcataacccacattgaaacatcagatgcaaaggtcgagtcacaaatgtaaagaaatccctttaattctcccatgctaatatgcctgtt---a 48361718  T
Q  118 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 217  Q
    ||| ||| | |  ||||||||||| ||||||||  || ||||||||||||||| || | |||||| ||||||||||| ||| ||||||| |||| |  |     
T  48361717 ccaagaattccattattatgatttccaaacacatgtggaggagaaggaaatgactgcaccctctcactttcaaaacagaaaaacaatattgacctttgct 48361618  T
Q  218 tttccttaaatcggatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact 300  Q
       ||| |||||  |||||||||||||||| | |||||||||||||||||   |||   ||| ||||||| ||||||||||||    
T  48361617 gaccctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactcgagactcgaaaaagaaatgtgaggatccact 48361535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 35779976 - 35780061
Alignment:
Q  22 tcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacg 107  Q
    ||||||||||||||||||||||||| |   ||| | ||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  35779976 tcattcataacccacattgtaacatcaacaaaaaaattcaagtcacaaatgtaaagaaatccctttaattctcccatgctaatacg 35780061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 337
Target Start/End: Original strand, 4948 - 5130
Alignment:
Q  157 ggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcggatccaatgaagtgcacgagtcacac 256  Q
    ||||| ||||||||||| |||||||| || |||||||||||||||||||  |||  | || || ||| ||||| ||||||||||||||||| | ||||||    
T  4948 ggagagggaaatgattgcaacctctcactgtcaaaacaaaaacacaata--gacgtttcctttccctcaaatctgatccaatgaagtgcaccattcacac 5045  T
Q  257 aagtgggatacataagataagaagaagaaatttgaggatccac--tg--agttctccatgttggtgttccgagtgtgtgtatctc 337  Q
    ||||||||| ||||||| | ||| | |||||||||||||||||  ||  | |||||||||||| |||||||||||||||||||||    
T  5046 aagtgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttgatgttccgagtgtgtgtatctc 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 4791 - 4878
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaata 105  Q
    ||||||||||||||||||||||||||||||    ||  |||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  4791 atattcattcataacccacattgtaacatattttaaggagtttgagtcacaaatgtaaagaaatccctttaattctcccatgctaata 4878  T

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Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 9443248 - 9443521
Alignment:
Q  18 atattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcgca 117  Q
    ||||||||||||||||||||||| ||||| ||| | | || |||  ||||||||||| ||| |||||||||||||||||| ||||||| | || ||   |    
T  9443248 atattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctact---a 9443344  T
Q  118 ccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccc 217  Q
    | |  |||      |||||||||| ||||||||  || ||||||||||||||| || |||||||| |||||||| || |||  |||||| |||| |  |     
T  9443345 caataaac------attatgatttccaaacacatgtggaggagaaggaaatgactgcaacctctcactttcaaagcagaaaaccaatattgacctttgct 9443438  T
Q  218 tttccttaaatcggatccaatgaagtgcacgagtcacacaagtgggatacataagataagaagaagaaatttgaggatccact 300  Q
      |||| |||||  |||||||||||||||| | ||||||||||||||||| | |||   ||| ||||||||||||||||||||    
T  9443439 catcctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactttagactcgaaaaagaaatttgaggatccact 9443521  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 5131022 - 5131093
Alignment:
Q  132 attatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaa 203  Q
    ||||||||||||||||||   || ||||||||| |||||||| || ||||| ||||||||||  ||||||||    
T  5131022 attatgattttcaaacacgtgtggaggagaagggaatgattgcaatctctcactttcaaaactgaaacacaa 5131093  T

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