View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21315_low_19 (Length: 261)
Name: NF21315_low_19
Description: NF21315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21315_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 3674194 - 3673956
Alignment:
| Q |
16 |
gataagtcttcagaatcaagtagagggaaaaacttggtggaatgggcaagaccaatgttgagagatcaaaagaagctgcaccgtattatcgaccgtagac |
115 |
Q |
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| T |
3674194 |
gataagtcttcagaatcaagtagagggaaaaacttggtggaatgggcaagaccaatgttgagagatcaaaagaagctgcaccgtattatcgaccgtagac |
3674095 |
T |
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| Q |
116 |
ttgaaggtcaatatcctaccaaaggagcattgaaagttgctatgttagcttttaaatgtttgagtcatcacccaaatccaagacccttcatgagtgatgt |
215 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3674094 |
ttgaaggtcaatatcctaccaaaggagctttgaaagttgctatgttagcttttaaatgtttgagtcatcacccaaatccaagacccttcatgagtgatgt |
3673995 |
T |
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| Q |
216 |
tgttaaggttttggaaccacttcaagattttgatgatgt |
254 |
Q |
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| T |
3673994 |
tgttaaggttttggaaccacttcaagattttgatgatgt |
3673956 |
T |
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