View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21315_low_2 (Length: 562)

Name: NF21315_low_2
Description: NF21315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21315_low_2
NF21315_low_2
[»] chr8 (65 HSPs)
chr8 (137-548)||(24375797-24376212)
chr8 (14-81)||(24375673-24375740)
chr8 (137-259)||(28786410-28786533)
chr8 (185-267)||(18029706-18029788)
chr8 (185-281)||(34227409-34227503)
chr8 (174-281)||(38703784-38703890)
chr8 (173-281)||(2873531-2873638)
chr8 (174-266)||(5642804-5642897)
chr8 (174-266)||(5644745-5644838)
chr8 (137-229)||(11908509-11908602)
chr8 (185-266)||(15935585-15935666)
chr8 (174-281)||(24331516-24331621)
chr8 (174-281)||(24768621-24768727)
chr8 (185-281)||(41509580-41509674)
chr8 (187-281)||(32684763-32684855)
chr8 (137-227)||(14698198-14698287)
chr8 (203-279)||(8442134-8442208)
chr8 (185-281)||(9305605-9305699)
chr8 (137-227)||(23289013-23289106)
chr8 (174-281)||(30872581-30872688)
chr8 (185-266)||(11830271-11830352)
chr8 (185-281)||(32393393-32393487)
chr8 (178-250)||(12719265-12719337)
chr8 (138-246)||(13373285-13373392)
chr8 (197-284)||(24528818-24528903)
chr8 (174-279)||(30221855-30221959)
chr8 (137-227)||(9235453-9235543)
chr8 (185-281)||(23389101-23389196)
chr8 (185-281)||(29211952-29212047)
chr8 (174-266)||(38711808-38711902)
chr8 (197-284)||(9235366-9235452)
chr8 (185-266)||(12478669-12478750)
chr8 (174-281)||(15568890-15568996)
chr8 (174-266)||(35839453-35839546)
chr8 (174-266)||(35990733-35990826)
chr8 (185-281)||(29346087-29346183)
chr8 (137-212)||(12719193-12719268)
chr8 (174-252)||(25653890-25653969)
chr8 (185-281)||(5566681-5566776)
chr8 (183-279)||(27702933-27703028)
chr8 (185-266)||(31974888-31974970)
chr8 (185-281)||(297691-297785)
chr8 (185-266)||(36637088-36637169)
chr8 (199-267)||(5600210-5600278)
chr8 (199-267)||(5640342-5640410)
chr8 (216-283)||(23245571-23245636)
chr8 (183-259)||(33958683-33958756)
chr8 (185-266)||(4943995-4944075)
chr8 (185-281)||(12936334-12936428)
chr8 (173-214)||(13558752-13558793)
chr8 (197-281)||(14698115-14698197)
chr8 (174-214)||(13558722-13558762)
chr8 (144-224)||(23245660-23245740)
chr8 (173-213)||(32684685-32684725)
chr8 (137-172)||(8980741-8980776)
chr8 (173-212)||(12936290-12936329)
chr8 (223-281)||(37545128-37545184)
chr8 (173-212)||(41509503-41509542)
chr8 (208-266)||(13572635-13572693)
chr8 (208-281)||(27637290-27637361)
chr8 (310-360)||(2671983-2672035)
chr8 (185-230)||(3156194-3156239)
chr8 (174-211)||(13558695-13558732)
chr8 (138-227)||(24528904-24528993)
chr8 (177-213)||(34845411-34845447)
[»] chr2 (73 HSPs)
chr2 (137-281)||(31989436-31989578)
chr2 (137-276)||(31377636-31377774)
chr2 (138-259)||(35791098-35791219)
chr2 (141-281)||(29878833-29878973)
chr2 (185-279)||(19272746-19272838)
chr2 (178-281)||(28781813-28781914)
chr2 (174-266)||(18756536-18756629)
chr2 (185-281)||(30497233-30497327)
chr2 (137-281)||(16590530-16590672)
chr2 (185-281)||(7007971-7008066)
chr2 (185-281)||(26498709-26498803)
chr2 (185-281)||(29949638-29949732)
chr2 (174-266)||(42794107-42794200)
chr2 (137-260)||(11478096-11478220)
chr2 (185-281)||(36525358-36525453)
chr2 (174-281)||(39373076-39373183)
chr2 (138-224)||(42223194-42223280)
chr2 (185-266)||(874449-874530)
chr2 (185-266)||(1975681-1975762)
chr2 (185-281)||(33218524-33218618)
chr2 (185-281)||(38127845-38127938)
chr2 (137-279)||(11915102-11915244)
chr2 (137-244)||(31397378-31397484)
chr2 (174-266)||(18048912-18049006)
chr2 (185-281)||(25103933-25104028)
chr2 (185-281)||(9419698-9419792)
chr2 (185-266)||(15543912-15543993)
chr2 (174-266)||(19253495-19253588)
chr2 (185-281)||(29096829-29096923)
chr2 (197-281)||(41906073-41906155)
chr2 (185-281)||(17886612-17886708)
chr2 (185-260)||(18755223-18755298)
chr2 (174-260)||(22846167-22846253)
chr2 (174-259)||(36795339-36795426)
chr2 (192-281)||(2526434-2526521)
chr2 (174-281)||(34831574-34831681)
chr2 (174-266)||(43830688-43830782)
chr2 (144-201)||(23381350-23381407)
chr2 (185-280)||(29883999-29884093)
chr2 (174-266)||(38949952-38950045)
chr2 (141-281)||(15580523-15580661)
chr2 (185-265)||(16204506-16204586)
chr2 (185-281)||(7318174-7318269)
chr2 (185-286)||(16303820-16303919)
chr2 (185-266)||(16260605-16260686)
chr2 (185-281)||(16138912-16139007)
chr2 (185-259)||(776473-776547)
chr2 (181-281)||(23381242-23381341)
chr2 (174-281)||(39752046-39752153)
chr2 (197-281)||(42223107-42223190)
chr2 (146-207)||(943958-944019)
chr2 (185-281)||(4158023-4158117)
chr2 (174-214)||(34831671-34831712)
chr2 (173-213)||(19272874-19272914)
chr2 (174-210)||(31260794-31260830)
chr2 (174-243)||(11673798-11673869)
chr2 (174-212)||(18755180-18755219)
chr2 (144-243)||(41567366-41567465)
chr2 (173-215)||(7007898-7007940)
chr2 (243-281)||(11673726-11673763)
chr2 (152-281)||(13315930-13316055)
chr2 (184-230)||(24759024-24759070)
chr2 (243-281)||(29884170-29884208)
chr2 (178-212)||(36525488-36525522)
chr2 (174-214)||(18756505-18756546)
chr2 (177-213)||(776402-776438)
chr2 (177-213)||(9419627-9419663)
chr2 (185-252)||(22984017-22984085)
chr2 (186-282)||(24217032-24217127)
chr2 (179-247)||(25293464-25293532)
chr2 (177-213)||(31122167-31122203)
chr2 (178-214)||(39752020-39752056)
chr2 (208-260)||(41100794-41100846)
[»] chr7 (94 HSPs)
chr7 (137-279)||(45687732-45687873)
chr7 (137-284)||(2936231-2936376)
chr7 (174-281)||(31749402-31749507)
chr7 (185-281)||(11576769-11576863)
chr7 (185-281)||(31307933-31308027)
chr7 (149-281)||(27082650-27082780)
chr7 (149-281)||(27195521-27195651)
chr7 (185-281)||(442617-442711)
chr7 (141-281)||(15011882-15012021)
chr7 (178-281)||(31863902-31864003)
chr7 (174-267)||(24233391-24233485)
chr7 (185-281)||(5864644-5864738)
chr7 (185-281)||(12005462-12005556)
chr7 (174-281)||(13263951-13264057)
chr7 (137-281)||(24812844-24812988)
chr7 (174-281)||(26254744-26254850)
chr7 (181-281)||(32199956-32200054)
chr7 (174-281)||(32946368-32946474)
chr7 (185-281)||(47370235-47370329)
chr7 (178-266)||(14187785-14187873)
chr7 (185-281)||(17051898-17051993)
chr7 (174-281)||(10067836-10067943)
chr7 (174-281)||(20055007-20055113)
chr7 (185-281)||(31750802-31750896)
chr7 (174-266)||(10975621-10975713)
chr7 (204-279)||(34258324-34258397)
chr7 (203-281)||(1853184-1853260)
chr7 (185-267)||(2240619-2240702)
chr7 (137-224)||(9689332-9689419)
chr7 (185-278)||(17155693-17155783)
chr7 (174-266)||(20164290-20164384)
chr7 (137-227)||(43393874-43393964)
chr7 (174-266)||(2624758-2624851)
chr7 (185-281)||(21444064-21444158)
chr7 (185-281)||(35158265-35158358)
chr7 (185-281)||(43707125-43707219)
chr7 (187-281)||(2514113-2514205)
chr7 (185-259)||(8391065-8391140)
chr7 (174-281)||(2241041-2241148)
chr7 (138-223)||(3092337-3092422)
chr7 (197-281)||(15635169-15635251)
chr7 (185-281)||(30632080-30632173)
chr7 (185-281)||(36374228-36374322)
chr7 (173-281)||(38130917-38131023)
chr7 (185-266)||(40938211-40938292)
chr7 (195-281)||(13592789-13592874)
chr7 (137-208)||(28696628-28696700)
chr7 (137-227)||(1853266-1853354)
chr7 (138-281)||(25601843-25601984)
chr7 (140-211)||(27484941-27485012)
chr7 (183-237)||(2924093-2924147)
chr7 (185-281)||(3401884-3401979)
chr7 (197-281)||(10931974-10932057)
chr7 (137-223)||(11625132-11625218)
chr7 (174-267)||(17167595-17167689)
chr7 (137-227)||(42957468-42957558)
chr7 (185-285)||(1572814-1572912)
chr7 (185-266)||(15721025-15721106)
chr7 (174-281)||(41380471-41380577)
chr7 (185-281)||(46146243-46146337)
chr7 (186-259)||(2300924-2300999)
chr7 (195-281)||(38192771-38192856)
chr7 (243-281)||(10068008-10068046)
chr7 (144-214)||(10975703-10975773)
chr7 (185-247)||(13253463-13253525)
chr7 (138-227)||(15635252-15635342)
chr7 (184-238)||(19093197-19093250)
chr7 (185-281)||(21022556-21022651)
chr7 (185-281)||(33441062-33441157)
chr7 (173-214)||(15994650-15994691)
chr7 (217-281)||(21522000-21522062)
chr7 (185-237)||(18268270-18268322)
chr7 (137-189)||(19377094-19377146)
chr7 (173-213)||(35158394-35158434)
chr7 (158-260)||(14675639-14675742)
chr7 (140-211)||(22859369-22859439)
chr7 (204-281)||(3092434-3092509)
chr7 (177-211)||(20089305-20089339)
chr7 (243-281)||(32946509-32946546)
chr7 (197-266)||(43393803-43393873)
chr7 (213-266)||(9689471-9689524)
chr7 (173-214)||(17167679-17167720)
chr7 (185-238)||(26876689-26876742)
chr7 (172-213)||(28696585-28696626)
chr7 (209-281)||(42957572-42957642)
chr7 (178-214)||(2241015-2241051)
chr7 (178-230)||(2918790-2918842)
chr7 (173-213)||(5864568-5864608)
chr7 (245-281)||(13592966-13593001)
chr7 (245-281)||(15994697-15994733)
chr7 (177-213)||(17155786-17155822)
chr7 (177-213)||(21521943-21521979)
chr7 (195-266)||(22969258-22969330)
chr7 (213-284)||(27484835-27484904)
[»] chr4 (62 HSPs)
chr4 (137-284)||(9780436-9780584)
chr4 (174-279)||(2032601-2032708)
chr4 (185-281)||(42056061-42056155)
chr4 (185-281)||(29104242-29104337)
chr4 (137-281)||(49277771-49277914)
chr4 (174-281)||(49296188-49296294)
chr4 (174-281)||(32682357-32682464)
chr4 (174-266)||(41325399-41325492)
chr4 (178-281)||(25244551-25244652)
chr4 (185-281)||(3652353-3652447)
chr4 (185-259)||(4102891-4102965)
chr4 (176-281)||(17696254-17696357)
chr4 (185-281)||(18165087-18165182)
chr4 (174-266)||(22854059-22854153)
chr4 (185-281)||(23184839-23184932)
chr4 (138-227)||(5283766-5283855)
chr4 (185-281)||(18510065-18510159)
chr4 (185-281)||(26040705-26040800)
chr4 (137-224)||(13555709-13555796)
chr4 (137-281)||(16734162-16734307)
chr4 (183-281)||(24675362-24675458)
chr4 (180-259)||(29700602-29700681)
chr4 (173-281)||(30919000-30919105)
chr4 (174-279)||(39133169-39133273)
chr4 (185-266)||(21507921-21508001)
chr4 (185-281)||(31856976-31857070)
chr4 (185-266)||(49166741-49166822)
chr4 (185-286)||(50773366-50773466)
chr4 (137-227)||(8810044-8810134)
chr4 (137-223)||(16875981-16876066)
chr4 (185-281)||(30409303-30409398)
chr4 (185-266)||(7913312-7913392)
chr4 (174-266)||(14946053-14946146)
chr4 (178-259)||(40568193-40568274)
chr4 (210-281)||(14121470-14121539)
chr4 (137-281)||(49533146-49533288)
chr4 (137-227)||(42161381-42161472)
chr4 (185-281)||(5514553-5514648)
chr4 (203-268)||(46088141-46088207)
chr4 (185-254)||(15786002-15786071)
chr4 (185-282)||(18509068-18509164)
chr4 (185-281)||(31226380-31226474)
chr4 (185-266)||(32681897-32681977)
chr4 (137-281)||(29172646-29172788)
chr4 (137-192)||(8678934-8678989)
chr4 (173-211)||(5114260-5114298)
chr4 (182-266)||(14574766-14574851)
chr4 (173-213)||(3652483-3652523)
chr4 (204-279)||(5283685-5283758)
chr4 (177-213)||(15786074-15786110)
chr4 (174-214)||(32682327-32682367)
chr4 (149-277)||(40920757-40920884)
chr4 (197-279)||(8809963-8810043)
chr4 (173-211)||(14121371-14121409)
chr4 (243-281)||(25244474-25244511)
chr4 (185-281)||(39152039-39152134)
chr4 (178-212)||(50719771-50719805)
chr4 (213-266)||(13555848-13555901)
chr4 (138-175)||(25786326-25786363)
chr4 (197-281)||(42161298-42161380)
chr4 (174-214)||(49296157-49296198)
chr4 (174-221)||(5114188-5114236)
[»] chr1 (51 HSPs)
chr1 (137-281)||(13436932-13437073)
chr1 (137-266)||(22151997-22152126)
chr1 (355-481)||(17877801-17877927)
chr1 (185-281)||(5932044-5932138)
chr1 (185-281)||(26190813-26190907)
chr1 (137-281)||(44228357-44228499)
chr1 (185-281)||(14909957-14910051)
chr1 (356-509)||(20145217-20145365)
chr1 (174-266)||(5457176-5457269)
chr1 (137-281)||(33864133-33864277)
chr1 (137-281)||(33916645-33916789)
chr1 (174-281)||(47231199-47231305)
chr1 (138-281)||(9240549-9240691)
chr1 (185-281)||(21770837-21770931)
chr1 (185-281)||(27665999-27666093)
chr1 (152-253)||(44078638-44078739)
chr1 (174-266)||(9209670-9209764)
chr1 (185-281)||(41189919-41190013)
chr1 (185-281)||(44961088-44961182)
chr1 (174-266)||(26399041-26399136)
chr1 (137-212)||(5469473-5469548)
chr1 (150-252)||(16639595-16639698)
chr1 (137-227)||(25059909-25059999)
chr1 (174-266)||(20158837-20158929)
chr1 (187-267)||(21853728-21853809)
chr1 (185-266)||(22387374-22387455)
chr1 (185-281)||(23161908-23162001)
chr1 (197-281)||(25060000-25060082)
chr1 (174-265)||(31883557-31883649)
chr1 (177-281)||(16420995-16421099)
chr1 (185-281)||(47979963-47980057)
chr1 (174-259)||(6284364-6284451)
chr1 (174-235)||(16474431-16474493)
chr1 (185-281)||(30147148-30147243)
chr1 (185-281)||(47641883-47641978)
chr1 (137-194)||(7261486-7261543)
chr1 (174-259)||(15336679-15336767)
chr1 (186-227)||(22315288-22315329)
chr1 (185-265)||(46528958-46529039)
chr1 (185-226)||(50345090-50345131)
chr1 (386-442)||(20186430-20186486)
chr1 (173-213)||(26190942-26190982)
chr1 (152-252)||(49590540-49590640)
chr1 (209-260)||(22315341-22315392)
chr1 (174-211)||(23162006-23162044)
chr1 (245-281)||(15336571-15336607)
chr1 (178-214)||(15336653-15336689)
chr1 (195-266)||(21881297-21881369)
chr1 (177-213)||(44961186-44961222)
chr1 (177-213)||(46528887-46528923)
chr1 (174-214)||(47231295-47231335)
[»] chr3 (64 HSPs)
chr3 (137-265)||(7308137-7308264)
chr3 (137-281)||(30226182-30226325)
chr3 (173-281)||(7272642-7272748)
chr3 (174-281)||(2985685-2985790)
chr3 (174-281)||(7226151-7226259)
chr3 (185-281)||(13049639-13049733)
chr3 (185-281)||(52839498-52839592)
chr3 (137-227)||(43426370-43426461)
chr3 (137-227)||(25124876-25124966)
chr3 (153-281)||(37050096-37050220)
chr3 (185-281)||(13041562-13041656)
chr3 (174-285)||(28735521-28735631)
chr3 (185-281)||(31293651-31293745)
chr3 (183-281)||(13439761-13439857)
chr3 (185-281)||(5572152-5572246)
chr3 (174-266)||(14220555-14220648)
chr3 (174-266)||(14224782-14224875)
chr3 (174-281)||(19111128-19111233)
chr3 (185-281)||(32721706-32721800)
chr3 (197-279)||(25124967-25125047)
chr3 (137-227)||(55257748-55257839)
chr3 (137-227)||(17030694-17030783)
chr3 (185-281)||(22817964-22818058)
chr3 (138-259)||(23070103-23070224)
chr3 (141-281)||(7013277-7013416)
chr3 (137-227)||(17582477-17582567)
chr3 (143-258)||(18359345-18359463)
chr3 (189-267)||(45151718-45151796)
chr3 (185-254)||(34314778-34314847)
chr3 (144-211)||(22438727-22438794)
chr3 (183-281)||(31073854-31073950)
chr3 (185-267)||(54571292-54571374)
chr3 (185-281)||(14870130-14870223)
chr3 (197-281)||(17030611-17030693)
chr3 (185-266)||(38703183-38703264)
chr3 (183-267)||(52962325-52962409)
chr3 (197-260)||(25158890-25158953)
chr3 (141-253)||(25158965-25159081)
chr3 (185-281)||(39218832-39218926)
chr3 (185-266)||(300263-300344)
chr3 (185-281)||(7670570-7670664)
chr3 (185-250)||(14004463-14004528)
chr3 (179-281)||(22447005-22447108)
chr3 (153-260)||(1452080-1452187)
chr3 (145-212)||(45008056-45008123)
chr3 (174-281)||(26770106-26770213)
chr3 (185-266)||(3505199-3505280)
chr3 (174-266)||(48689200-48689293)
chr3 (217-281)||(28298187-28298250)
chr3 (173-213)||(52839422-52839462)
chr3 (173-215)||(7226248-7226290)
chr3 (243-281)||(7226294-7226331)
chr3 (177-211)||(30451479-30451513)
chr3 (243-281)||(39218733-39218770)
chr3 (173-215)||(45151830-45151872)
chr3 (203-260)||(5303594-5303651)
chr3 (195-279)||(22438810-22438892)
chr3 (216-281)||(41423129-41423193)
chr3 (197-266)||(45007958-45008027)
chr3 (177-213)||(14870059-14870095)
chr3 (178-214)||(19111102-19111138)
chr3 (173-213)||(22818094-22818134)
chr3 (178-214)||(36727759-36727795)
chr3 (177-260)||(36727788-36727870)
[»] chr5 (59 HSPs)
chr5 (137-266)||(13153643-13153772)
chr5 (185-281)||(41123343-41123437)
chr5 (178-281)||(31312645-31312746)
chr5 (185-281)||(11721348-11721442)
chr5 (137-281)||(31567715-31567856)
chr5 (174-281)||(8855480-8855585)
chr5 (173-267)||(15885561-15885655)
chr5 (174-281)||(4414009-4414115)
chr5 (185-281)||(22756263-22756357)
chr5 (177-266)||(23188756-23188845)
chr5 (174-286)||(27330986-27331093)
chr5 (185-259)||(8861405-8861479)
chr5 (144-210)||(20024156-20024222)
chr5 (185-281)||(25962884-25962978)
chr5 (174-281)||(26243183-26243289)
chr5 (174-281)||(31920142-31920248)
chr5 (173-281)||(34309497-34309603)
chr5 (174-281)||(12148094-12148201)
chr5 (137-227)||(37869476-37869566)
chr5 (185-281)||(6896983-6897077)
chr5 (185-281)||(21039947-21040041)
chr5 (185-281)||(30916565-30916659)
chr5 (137-279)||(20628067-20628213)
chr5 (137-227)||(21144067-21144157)
chr5 (185-281)||(25233824-25233919)
chr5 (185-281)||(25297984-25298079)
chr5 (185-281)||(4561802-4561896)
chr5 (185-266)||(6117681-6117762)
chr5 (148-257)||(17190792-17190901)
chr5 (138-227)||(20355180-20355269)
chr5 (185-281)||(28796429-28796523)
chr5 (185-281)||(42368519-42368613)
chr5 (203-281)||(20355097-20355173)
chr5 (187-266)||(23159562-23159641)
chr5 (174-281)||(40765466-40765569)
chr5 (177-266)||(7577882-7577972)
chr5 (174-281)||(10819538-10819643)
chr5 (137-281)||(35687330-35687471)
chr5 (185-260)||(21125182-21125258)
chr5 (185-260)||(30907421-30907496)
chr5 (197-260)||(42778906-42778969)
chr5 (144-214)||(15885502-15885572)
chr5 (185-281)||(23108831-23108926)
chr5 (174-281)||(25088734-25088841)
chr5 (174-281)||(25146703-25146810)
chr5 (185-238)||(12067966-12068019)
chr5 (185-281)||(38874536-38874630)
chr5 (178-230)||(41185134-41185186)
chr5 (137-212)||(15399722-15399797)
chr5 (159-260)||(17668682-17668784)
chr5 (174-281)||(29691043-29691149)
chr5 (173-213)||(11721478-11721518)
chr5 (173-213)||(22756187-22756227)
chr5 (173-213)||(41123267-41123307)
chr5 (150-282)||(5818468-5818599)
chr5 (183-214)||(29691139-29691170)
chr5 (137-175)||(42779020-42779058)
chr5 (206-259)||(6527388-6527441)
chr5 (197-281)||(21144158-21144240)
[»] scaffold0258 (1 HSPs)
scaffold0258 (185-266)||(18799-18880)
[»] chr6 (45 HSPs)
chr6 (140-281)||(3816598-3816738)
chr6 (185-281)||(9222526-9222620)
chr6 (138-223)||(9662856-9662941)
chr6 (174-281)||(12292945-12293051)
chr6 (185-281)||(686490-686584)
chr6 (185-281)||(16659661-16659755)
chr6 (185-266)||(2270548-2270629)
chr6 (185-250)||(10343609-10343674)
chr6 (174-281)||(16119776-16119882)
chr6 (185-254)||(33708751-33708820)
chr6 (174-249)||(34077532-34077608)
chr6 (137-227)||(9044565-9044655)
chr6 (177-266)||(14291167-14291257)
chr6 (185-266)||(1227772-1227853)
chr6 (185-281)||(17158312-17158406)
chr6 (208-281)||(8237721-8237792)
chr6 (174-281)||(10546048-10546155)
chr6 (185-286)||(22495899-22495997)
chr6 (185-281)||(26882159-26882254)
chr6 (185-281)||(7321959-7322053)
chr6 (185-281)||(9234927-9235020)
chr6 (185-266)||(9676419-9676500)
chr6 (181-250)||(18274296-18274365)
chr6 (185-266)||(21544226-21544307)
chr6 (185-281)||(34414469-34414563)
chr6 (140-219)||(25167027-25167106)
chr6 (174-259)||(18591306-18591392)
chr6 (185-266)||(26475858-26475940)
chr6 (174-281)||(32216929-32217033)
chr6 (197-281)||(25166934-25167018)
chr6 (175-238)||(5460021-5460085)
chr6 (197-259)||(9044501-9044564)
chr6 (185-279)||(18592095-18592187)
chr6 (185-260)||(22362720-22362795)
chr6 (216-281)||(3108711-3108774)
chr6 (185-281)||(13729134-13729229)
chr6 (185-281)||(32603683-32603776)
chr6 (178-238)||(21556103-21556163)
chr6 (174-224)||(10671868-10671918)
chr6 (215-266)||(13462715-13462766)
chr6 (184-230)||(359860-359906)
chr6 (185-281)||(11107730-11107825)
chr6 (208-281)||(29942608-29942679)
chr6 (177-210)||(9676380-9676413)
chr6 (203-281)||(9662768-9662845)
[»] scaffold0004 (3 HSPs)
scaffold0004 (174-281)||(212595-212701)
scaffold0004 (137-227)||(82313-82403)
scaffold0004 (203-284)||(82227-82306)
[»] scaffold0067 (1 HSPs)
scaffold0067 (137-227)||(25845-25936)
[»] scaffold0003 (2 HSPs)
scaffold0003 (137-204)||(306667-306733)
scaffold0003 (182-281)||(316515-316612)
[»] scaffold0430 (2 HSPs)
scaffold0430 (174-266)||(12670-12763)
scaffold0430 (174-214)||(12639-12680)
[»] scaffold0154 (1 HSPs)
scaffold0154 (183-267)||(9315-9400)
[»] scaffold0121 (1 HSPs)
scaffold0121 (174-281)||(12550-12656)
[»] scaffold0026 (1 HSPs)
scaffold0026 (194-259)||(84276-84341)
[»] scaffold0002 (2 HSPs)
scaffold0002 (185-281)||(332146-332240)
scaffold0002 (185-266)||(432592-432673)
[»] scaffold1462 (2 HSPs)
scaffold1462 (174-254)||(220-300)
scaffold1462 (177-214)||(290-327)
[»] scaffold0142 (1 HSPs)
scaffold0142 (197-281)||(34960-35042)
[»] scaffold0022 (1 HSPs)
scaffold0022 (185-266)||(63230-63311)
[»] scaffold0289 (1 HSPs)
scaffold0289 (185-266)||(6820-6901)
[»] scaffold0125 (1 HSPs)
scaffold0125 (185-281)||(3484-3578)
[»] scaffold0188 (1 HSPs)
scaffold0188 (137-190)||(13286-13339)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-266)||(242524-242609)
[»] scaffold0110 (1 HSPs)
scaffold0110 (137-260)||(23217-23334)
[»] scaffold0010 (2 HSPs)
scaffold0010 (204-279)||(145108-145181)
scaffold0010 (174-213)||(145056-145095)


Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 137 - 548
Target Start/End: Original strand, 24375797 - 24376212
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24375797 gaccttcatggcatcaaattacaaaatttatggtactttcgtcccttgtaatttgagcaaatttcagtttaccccctgccatatcatcaattttgtacag 24375896  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatggaatctnnnnnnnnnnt-acaaggggtaaaccggaaatggtatatattacagg 335  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||||||          | |||| || ||||||||||||| | |||||||||||    
T  24375897 tcgaaattcatgaaggtccaaaatgaaaaaa-tcttcaaattacatggaatctaaaaaaaaaattacaaaggataaaccggaaatgatctatattacagg 24375995  T
Q  336 -agtaaagcaatattaacccttaaaactatttaagtctttttataaaggggaggtggtgctttccaggtttttatggctgagagttgttggtcgacagtt 434  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24375996 gagtaaagcaatattaacccttaaaactatttaagtctttttataaaggggaggtggtgctttctaggtttttatggctgagagttgttggtcgacagtt 24376095  T
Q  435 acagatggtggaatccataaaagctgaccattgcttaatggtgatgat---agaagcagttataattaagtgttttaagttgtcgattgcagcaaacaaa 531  Q
    ||| |||||||||||||||||||| || ||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  24376096 acaaatggtggaatccataaaagccgagcattgcttaatggtgatgatagaagaagcagttataattaagtgttttaaattgtcgattgcagcgaacaaa 24376195  T
Q  532 tctcctcgtgatggaag 548  Q
    |||||||||||||||||    
T  24376196 tctcctcgtgatggaag 24376212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 24375673 - 24375740
Alignment:
Q  14 ataattctaacatatgtcaataaacaataaacatccttgtaaaataggtcattttcgggttatcccct 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24375673 ataattctaacatatgtcaataaacaataaacatccttgtaaaataggtcatttttgggttatcccct 24375740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 28786410 - 28786533
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacc-ccctgccatatcatcgattttataca 235  Q
    ||||||||||||||||| || |||| |||| |||||||   | |||||||||||||||||||||  ||||| | ||||||||||||||||||||| ||||    
T  28786410 gaccttcatggcatcaattttcaaactttaaggtacttccgctccctgtaatttgagcaaattttggtttagctccctgccatatcatcgattttgtaca 28786509  T
Q  236 gtcgaaattcatgaaggtctaaaa 259  Q
    ||| ||||||||||||||| ||||    
T  28786510 gtcaaaattcatgaaggtccaaaa 28786533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 18029788 - 18029706
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  18029788 taatttgagaaaatttcggtttaccccctgccatatcatcaattttatacagtcaaaattcatgaaggtccaaaacaaaaaaa 18029706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 34227503 - 34227409
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||||   ||||||||||||||||||    
T  34227503 taatttgagcaaattttggtttaccccctgccatatgttcgattttgtacagtcaaaattcatgaaggtctaaaac--caaaaatcttcaaattaca 34227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 38703784 - 38703890
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||| ||||||  ||||||||||||||| |||||   |||||||||    
T  38703784 tttaccccctgttaatttgagcaaatttcggtttaccccctaccatatcttcgattttgtacagtaaaaattcatgaaggtccaaaac--caaaaatctt 38703881  T
Q  273 caaattaca 281  Q
    |||||||||    
T  38703882 caaattaca 38703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 2873638 - 2873531
Alignment:
Q  173 ttttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||| |||||||| |||||||||||||||| ||||| |||||| |||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||    
T  2873638 tttttccccctgttaatttgagcaaatttcggtttatcccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatct 2873541  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  2873540 tcaaattaca 2873531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 5642897 - 5642804
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||| |||| || ||||||||||||||| ||||| |||||    
T  5642897 tttaccccctgttaatttgagcaaatttcggtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaa 5642804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 5644838 - 5644745
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||| |||| || ||||||||||||||| ||||| |||||    
T  5644838 tttaccccctgttaatttgagcaaatttcggtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaa 5644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 11908509 - 11908602
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccc-cctgccatatcatcgattt 229  Q
    |||||||||||||||||||| ||||||||| |||||||||  || |||||||||||||| ||||  |||||||| |||||||||||||||||||    
T  11908509 gaccttcatggcatcaaatttcaaaatttaaggtacttttgtcctctgtaatttgagcatattttggtttaccctcctgccatatcatcgattt 11908602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 15935585 - 15935666
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||| ||||||| ||||||||||||||||||||| |||||    
T  15935585 taatttgagcaaatttcggtttaccccctaccatatcttcaattttgtacagtcaaaattcatgaaggtctaaaaccaaaaa 15935666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 24331516 - 24331621
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||| |||| || ||||||||||||||| |||||   |||||||||    
T  24331516 tttaccccctgttaatttgagcaaatttcggtttacccc-tgccatatcttcgattttgtacaatcaaaattcatgaaggtccaaaac--caaaaatctt 24331612  T
Q  273 caaattaca 281  Q
    |||||||||    
T  24331613 caaattaca 24331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 24768727 - 24768621
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||| |||||||| |||||  |||||   |||||||||    
T  24768727 tttacccccttgtaatttgagcaaatttcggtttaccccttgccatatcttcgattttgtacagtcaaaattcattaaggttcaaaac--caaaaatctt 24768630  T
Q  273 caaattaca 281  Q
    |||||||||    
T  24768629 caaattaca 24768621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 41509580 - 41509674
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||| |||| || ||||||||||||||| |||||   ||||||||||||||||||    
T  41509580 taatttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacaatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 41509674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 32684763 - 32684855
Alignment:
Q  187 atttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||| |||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  32684763 atttaagcaaatttcggtttaccccttgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 32684855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 14698287 - 14698198
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||||||||||||||| ||| |||||||| |||||||||  ||  ||||||||||| |||||||||||| ||||||||||||||||||||    
T  14698287 gaccttcatggcatcaa-ttataaaatttaaggtacttttgtcctttgtaatttgagaaaatttcagtttgccccctgccatatcatcgat 14698198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 8442134 - 8442208
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||  ||||||||||    
T  8442134 gtttaccccctgccatatcatcgattttatacactcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaatta 8442208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 9305605 - 9305699
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||||||||| |||||| |||||||| ||||||| ||||||||||||||  |||||   ||||||||||||||||||    
T  9305605 taatttgagcaaatttcgatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggttcaaaac--caaaaatcttcaaattaca 9305699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 23289106 - 23289013
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta---ccccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| ||||||||   |||||||||||||||  |||||| |||||   ||||||| ||||||||||||    
T  23289106 gaccttcatggcatcaaattacaaaatttaaggtactttcgtcccctgtaatttgagagaatttctgtttaatcccccctgtcatatcatcgat 23289013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 30872581 - 30872688
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| ||||| || ||||||| |||||| |||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||    
T  30872581 tttaccccctgttaattttagaaaatttcggtttactcccctgacatattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--ct 30872678  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  30872679 tcaaattaca 30872688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 11830352 - 11830271
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  11830352 taatttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 11830271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 32393487 - 32393393
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||||||| ||||||| | |||||| ||||||  |||||||| |||||| |||||  |||||||||||||||||||    
T  32393487 taatttgagaaaatttcggtttaccccctaccatatctttgattttgtacagttaaaattcataaaggtccaaaac--aaaaaatcttcaaattaca 32393393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 12719265 - 12719337
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaa 250  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||||||| || ||||  ||||||||||    
T  12719265 ccccctctaatttgagcaaatttcggtttacctcctgccatatcatcgattttgtatagtcacaattcatgaa 12719337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 13373285 - 13373392
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    |||||| |||||||||||||||||||||| |||| |||| |||| |||||||||||  |||| | || || ||||||| |||||||||||||| ||||||    
T  13373285 accttcctggcatcaaattacaaaatttaaggtatttttgccccttgtaatttgagagaattccggtgta-cccctgctatatcatcgattttgtacagt 13373383  T
Q  238 cgaaattca 246  Q
      |||||||    
T  13373384 aaaaattca 13373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 24528903 - 24528818
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    ||||||||||||||||||  |||||||||||||| ||||||| |||||||||||  |||||||| ||||| |  ||||||||||||||    
T  24528903 atttcagtttaccccctgtaatatcatcgattttgtacagtcaaaattcatgaaaatctaaaaccaaaaaga--ttcaaattacatgg 24528818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 30221959 - 30221855
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||| |||||||  ||||||| ||||||||| ||||||||| ||| ||| ||||||||||||||  ||||| ||||||  |||    
T  30221959 tttaccccctgttaatttgagaaaatttcgatttaccctctgccatattatcgattttgtacggtcaaaattcatgaaggttcaaaaccaaaaaa--ctt 30221862  T
Q  273 caaatta 279  Q
    |||||||    
T  30221861 caaatta 30221855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 9235543 - 9235453
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||   |||||  ||||| ||| || ||||||||||||    
T  9235543 gaccttcatggcatcaaattacaaaatttaaggtactttcgccccttgtaatttgaaagaattttggtttaacccttgacatatcatcgat 9235453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 23389196 - 23389101
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||| ||||| | |||||| |||||||| ||||||| ||||| ||||||||| |||||   ||||||||||||||||||    
T  23389196 taatttgagcaaatttcggtttacccccccgtcatatcttcgattttgtacagtcaaaatttatgaaggtccaaaac--caaaaatcttcaaattaca 23389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 29212047 - 29211952
Alignment:
Q  185 taatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||||| || |||| ||||||||||||||| |||||   | ||||||||||||||||    
T  29212047 taatttgagcaaatttcagtttactcccctaccatatcatatattttgtatagtcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 29211952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 38711808 - 38711902
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||| |||||||| ||||| ||||| ||||||||  |||||| ||||||||||||||| ||||| |||||    
T  38711808 tttaccccctgttaattttagcaaatttcggtttaccctcctgctatatcttcgattttgaacagtcaaaattcatgaaggtccaaaaccaaaaa 38711902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 9235452 - 9235366
Alignment:
Q  197 atttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    ||||| ||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||| |||||   |||| ||||||||||||||||    
T  9235452 atttcggtttaccaccctgtcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaattcttcaaattacatgg 9235366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 12478750 - 12478669
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| | |||||| ||| ||| ||||||||||||||| ||||| |||||    
T  12478750 taatttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 12478669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 15568890 - 15568996
Alignment:
Q  174 tttaccccctg-taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    ||||||||||| |||||||| |||||||| |||||| | ||| ||||| ||||||||| ||| ||  || ||||||||||||||||||   |||||||||    
T  15568890 tttaccccctgataatttgaccaaatttcggtttacactctgtcatattatcgattttgtactgttaaatttcatgaaggtctaaaac--caaaaatctt 15568987  T
Q  273 caaattaca 281  Q
    |||||||||    
T  15568988 caaattaca 15568996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 35839546 - 35839453
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||||||||||||||  ||||||||| | |||||| |||||||| |||  || ||||||||||||||| ||||| |||||    
T  35839546 tttaccccctgttaatttgagcaaatttcgatttaccccccgtcatatcttcgattttgtactatcaaaattcatgaaggtccaaaaccaaaaa 35839453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 35990733 - 35990826
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| |||||||||||  |||||  |||||||| ||| ||| |||||||||||| || ||||| |||||    
T  35990733 tttaccccctgttaatttgagcaaatttcggtttaccccctatcatattttcgattttgtactgtcaaaattcatgaagatccaaaactaaaaa 35990826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 29346183 - 29346087
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc--tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||| ||  || |||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  29346183 taatttgagaaaatttcggtttacctcccatgacatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 29346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 12719193 - 12719268
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||| ||||||||| ||||||| ||| ||||||  |||| ||||||||||||| |||| |||||||||||    
T  12719193 gaccttcatgacatcaaatttcaaaattgatgatactttcgccccttgtaatttgagcagattttagtttaccccc 12719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 25653890 - 25653969
Alignment:
Q  174 tttaccccctgtaattt-gagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaagg 252  Q
    |||||||||||| |||| ||||||||||| |||||||| || ||||||| |||||||| ||| ||| |||||||||||||    
T  25653890 tttaccccctgttattttgagcaaatttcggtttaccctctaccatatcttcgattttgtactgtcaaaattcatgaagg 25653969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 5566681 - 5566776
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| ||||||  |||| ||||||| |||||| |||||||| ||||||| ||||||||||||||| |||||   | ||||||||||||||||    
T  5566681 taatttgagcgaatttcgatttagccccctgtcatatcgtcgattttgtacagtcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 5566776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 27702933 - 27703028
Alignment:
Q  183 tgtaatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    |||||||||| |||||||||||||||| || || ||||||||||||||| ||| ||| ||||| ||||| ||||||| |  ||| |||||||||||||    
T  27702933 tgtaatttgaacaaatttcagtttacctccgtgtcatatcatcgattttgtaccgtcaaaatttatgaaagtctaaacc--aaacaatcttcaaatta 27703028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 31974888 - 31974970
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||| |||| |||||||||| || ||||| ||||||| ||||||||||||||  ||||| |||||    
T  31974888 taatttgagcaaatttcggtttgcccccctgccatatcttcaattttgtacagtcaaaattcatgaaggttcaaaaccaaaaa 31974970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 297785 - 297691
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||  | ||||| ||||||||| |||||   |||| |||||||||||||    
T  297785 taatttgagcaaatttcggtttaccccctaccatatattcgattttgtacaaccaaaatttatgaaggtcaaaaac--caaaattcttcaaattaca 297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 36637169 - 36637088
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||| | || |||||||  ||||||||||| ||| ||||||||||| ||| ||||| |||||    
T  36637169 taatttgagcaaatttcggtttactctcttccatatctacgattttatacggtcaaaattcatgaatgtccaaaactaaaaa 36637088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 5600278 - 5600210
Alignment:
Q  199 ttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||| |||||  ||||| ||||||    
T  5600278 ttcagtttaccctctgccatattatcgattttgtacagtcaaaattcataaaggtacaaaactaaaaaa 5600210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 5640342 - 5640410
Alignment:
Q  199 ttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||| |||||  ||||| ||||||    
T  5640342 ttcagtttaccctctgccatattatcgattttgtacagtcaaaattcataaaggtacaaaactaaaaaa 5640410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 23245636 - 23245571
Alignment:
Q  216 catatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatg 283  Q
    ||||||||||||||| ||||||| ||||||||||| ||| |||||   ||||||||||||||||||||    
T  23245636 catatcatcgattttgtacagtcaaaattcatgaaagtccaaaac--taaaaatcttcaaattacatg 23245571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 33958756 - 33958683
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||||||||||||||||||||||    |||||| |||||||| ||| ||| ||||| ||||||||| ||||    
T  33958756 tgtaatttgagcaaatttcagtttacccc---tcatatcttcgattttgtacggtcaaaattgatgaaggtccaaaa 33958683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 4943995 - 4944075
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| ||||||||||||| ||||| | |||||||| ||||| ||| ||| ||||||||||| || |||||| |||||    
T  4943995 taatttgagtaaatttcagttta-ccccttctatatcatcaattttgtaccgtcaaaattcatgaaagtttaaaactaaaaa 4944075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 12936334 - 12936428
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| |||||||  ||||||||||| || ||||| |||||| ||  ||| ||||| ||||||||| ||||| ||||||  ||||||||||||    
T  12936334 taatttgagaaaatttcgatttaccccctgtcacatcattgattttgtatggtcaaaatttatgaaggtccaaaaccaaaaaa--cttcaaattaca 12936428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 13558793 - 13558752
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  13558793 ttttaccccctgtaatttgagcaaatttaggtttaccccctg 13558752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 14698197 - 14698115
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||| ||||||||||| |||||| ||| ||| |||||||| |||||  ||||   |||||||||||||||||||    
T  14698197 atttcaggttaccccttgccatatcattgattttgtactgtcaaaattcataaaggttcaaaa--taaaaaatcttcaaattaca 14698115  T

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Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 13558762 - 13558722
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13558762 tttaccccctgtaatttgagcaaatttaggtttaccccctg 13558722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 23245740 - 23245660
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatc 224  Q
    ||||||| |||||  |||||||| ||||||||  |||| |||||||||||  ||||||  |||||||| ||||||||||||    
T  23245740 atggcattaaattttaaaatttaaggtactttcgccccatgtaatttgagataatttcgttttaccccttgccatatcatc 23245660  T

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Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 32684685 - 32684725
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  32684685 ttttaccccctgtaatttgagcaaatttaggtttaccccct 32684725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 8980776 - 8980741
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtac 172  Q
    |||||||||| |||||||||||||||||||||||||    
T  8980776 gaccttcatgacatcaaattacaaaatttatggtac 8980741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 12936290 - 12936329
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  12936290 ttttgccccctgtaatttgagcaaatttcggtttaccccc 12936329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 37545128 - 37545184
Alignment:
Q  223 tcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  37545128 tcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 37545184  T

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Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 41509503 - 41509542
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  41509503 ttttaccccctgtaatttgagcaaatttaggtttaccccc 41509542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 13572693 - 13572635
Alignment:
Q  208 ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||| |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  13572693 ccccctgacatatcgtcgattttttactgtcaaaattcatgaaggtccaaaaccaaaaa 13572635  T

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Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 27637290 - 27637361
Alignment:
Q  208 ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||  ||||||| ||| ||| ||||||||||||||| |||||   | ||||||||||||||||    
T  27637290 ccccctgccatatcgccgattttgtactgtcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 27637361  T

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Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 2672035 - 2671983
Alignment:
Q  310 aaaccggaaatggtatatattacaggagt--aaagcaatattaacccttaaaa 360  Q
    ||||||||||||| |||||||||||| ||  |||||| |||||||||||||||    
T  2672035 aaaccggaaatggcatatattacaggggtgaaaagcactattaacccttaaaa 2671983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 3156239 - 3156194
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgatttt 230  Q
    ||||||||||||||||| ||||||||| | ||||||| ||||||||    
T  3156239 taatttgagcaaatttctgtttaccccttaccatatcttcgatttt 3156194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 13558732 - 13558695
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    |||||||||||||||||||||||||||  |||||||||    
T  13558732 tttaccccctgtaatttgagcaaatttaggtttacccc 13558695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 24528993 - 24528904
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||| ||||||||||||| ||||||||  ||| |||  |||  |||||||| ||  ||| || ||||||||||| |||||||||||||    
T  24528993 accttcgtggcatcaaattataaaatttaaagtattttcgccctttgtaattttagagaatctcggtttaccccctaccatatcatcgat 24528904  T

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Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 34845411 - 34845447
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  34845411 accccctgtaatttgagcaaatttaggtttaccccct 34845447  T

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Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 31989578 - 31989436
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||| |    
T  31989578 gaccttcatggcatcaaattacaaaatttatggtactttcgccccctataatatgagcaaatttcagttta-cccctgccatatcatcgattttgtacgg 31989480  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||  |||||||||||||| |||||  ||| | |||||||||||||    
T  31989479 tcataattcatgaaggtcgaaaac-caaagattcttcaaattaca 31989436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 31377774 - 31377636
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||||||  ||||| |||||||||||||||||||||| ||| |    
T  31377774 gaccttcatggcatcatattacaaaatttatagtactttcgcctcctgtaatttgagcaaattttggtttaacccctgccatatcatcgattttgtacgg 31377675  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaa 276  Q
    || ||||||||||| ||  ||||| |||| ||||||||||    
T  31377674 tcaaaattcatgaaagttcaaaac-aaaagaatcttcaaa 31377636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 35791219 - 35791098
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    ||||||||| ||||||||||||||||||| ||||||||  |||  |||||||||||   ||||| |||||||||||||||||||||||||||| ||||||    
T  35791219 accttcatgccatcaaattacaaaatttaaggtactttcgccctttgtaatttgagagtatttcggtttaccccctgccatatcatcgattttgtacagt 35791120  T
Q  238 cgaaattcatgaaggtctaaaa 259  Q
    | ||||||||||||||| ||||    
T  35791119 caaaattcatgaaggtccaaaa 35791098  T

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Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 29878833 - 29878973
Alignment:
Q  141 ttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcg 239  Q
    ||||||||||||||||||||||||||||||| |||   ||| |||||||| |||||||||  |||||||| |||||||||||||| ||||| |||| ||     
T  29878833 ttcatggcatcaaattacaaaatttatggtattttcgtcccttgtaatttaagcaaatttacgtttaccctcctgccatatcatcaattttgtacaatca 29878932  T
Q  240 aaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| ||||||||||||  ||| |||||||||||||||    
T  29878933 aaattcataaaggtctaaaac-caaagaatcttcaaattaca 29878973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 19272838 - 19272746
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||   ||||||||||||||||    
T  19272838 taatttgagcaaatttcagtttaccccctgccatatcttcaattttttacagtcaaaattcatgaaggtctaaaac--caaaaatcttcaaatta 19272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 28781813 - 28781914
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaat 277  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||| |||| |  ||||||||    
T  28781813 ccccctgcaatttgagcaaatttcggtttaccccctgccatattatcgattttgtacggtcaaaattcatgaaggtctaaaaccaaaata--cttcaaat 28781910  T
Q  278 taca 281  Q
    ||||    
T  28781911 taca 28781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 18756536 - 18756629
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  18756536 tttaccccctgttaatttgagcaaatttcggtttaccccatgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 18756629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30497327 - 30497233
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| |||| || |||||||||||||||||||||   | ||||||||||||||||    
T  30497327 taatttaagcaaatttcagtttaccccctgccatatcatctattttgtacattcaaaattcatgaaggtctaaaac--cagaaatcttcaaattaca 30497233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 16590672 - 16590530
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| ||||||||||||||||||| ||||||||  || ||| || ||||||  ||||||  |||||||||| | |||||||||||||| ||||     
T  16590672 gaccttcatgacatcaaattacaaaatttaaggtactttcgcctcctata-tttgagagaatttcgatttaccccctactatatcatcgattttgtacaa 16590574  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || ||||||||||||||  |||||  |||||||||||||||||||    
T  16590573 tcaaaattcatgaaggtgcaaaac-caaaaaatcttcaaattaca 16590530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 7007971 - 7008066
Alignment:
Q  185 taatttgagcaaatttcagttt-accccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| |||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  7007971 taatttgaacaaatttcggtttgaccccctgtcatatcatcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 7008066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 26498709 - 26498803
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| |  |||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  26498709 taatttgagaaaatttcggtttaccccctgccatatcatcgattttgtctagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 26498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 29949732 - 29949638
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||| |||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  29949732 taatttgaggaaatttcggtttatcccctgtcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 29949638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 42794200 - 42794107
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||| ||||||||||||||||||||  ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  42794200 tttaccccctgttaatttgagaaaatttcagtttaccccctggtatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 42794107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 11478096 - 11478220
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccc-cctgccatatcatcgattttataca 235  Q
    ||||||||| |||||||||||||||||||| ||||||||  || | ||||||||| |  |||||| |||||||| |||||||||||||| ||||| ||||    
T  11478096 gaccttcatagcatcaaattacaaaatttaaggtactttcgcctcttgtaatttgggataatttcggtttaccctcctgccatatcatcaattttgtaca 11478195  T
Q  236 gtcgaaattcatgaaggtctaaaac 260  Q
    ||| ||| || |||||||| |||||    
T  11478196 gtcaaaagtcgtgaaggtccaaaac 11478220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 36525453 - 36525358
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||| ||| ||||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  36525453 taatttgagcaaatttcggtttaccccactgtcatatcatcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 36525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 39373183 - 39373076
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||  |||||||| | ||||| ||||||||||||||| |||||   ||||||||    
T  39373183 tttacccccttgtaatttgagcaaatttcggtttaccctcctgccatatattcgattttgtccagtcaaaattcatgaaggtccaaaac--caaaaatct 39373086  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  39373085 tcaaattaca 39373076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 42223280 - 42223194
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatc 224  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||   |||||| |||||||||||| |||||||||    
T  42223280 accttcatggcatcaaattacaaaatttaaggtactttcgccccttgtaatttgaaagaatttcggtttaccccctgacatatcatc 42223194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 874530 - 874449
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||||  ||||||||| || ||||| |||||||| ||||||| ||||||||||||||||||||| |||||    
T  874530 taatttgagcaaatttcgatttacccccggctatatcttcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaa 874449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 1975681 - 1975762
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  1975681 taattttagcaaatttcggtttaccccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 1975762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 33218524 - 33218618
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |  ||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  33218524 taatttgagcaaatttcggtttaccccctgccatatctttcattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 33218618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 38127938 - 38127845
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||| ||||||||| || ||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  38127938 taatttgagcaaatttcggtttacccc-tgccatatcttcaattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 38127845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 279
Target Start/End: Complemental strand, 11915244 - 11915102
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgattttataca 235  Q
    |||||||||| ||||||||||||||||||| || |||||  |||| |||||||||||  |||||  ||||| | |||| |||||||||| ||||| ||||    
T  11915244 gaccttcatgacatcaaattacaaaatttaaggcactttcgccccgtgtaatttgagagaattttggtttatcaccctaccatatcatcaattttttaca 11915145  T
Q  236 gtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||| ||||  ||||||||| |||||  ||| |||||||||||||    
T  11915144 gtcaaaatctatgaaggtccaaaac-caaagaatcttcaaatta 11915102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 31397484 - 31397378
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| | ||||||| ||||||||||| ||||||  |||| ||||||||||||  |||||| ||||||||||||||||| ||||||||| ||| |    
T  31397484 gaccttcatgacgtcaaatttcaaaatttatgatactttcgccccttgtaatttgagc-gatttcaatttaccccctgccatattatcgattttgtaccg 31397386  T
Q  237 tcgaaatt 244  Q
    || |||||    
T  31397385 tcaaaatt 31397378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 18049006 - 18048912
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||||| |||||||| |||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  18049006 tttaccccctgttaatttgaccaaatttcggtttacccccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 18048912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 25103933 - 25104028
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||| |||||||||| | |||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  25103933 taatttgagcaaatttcggtttacccccctgccatatctttgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 25104028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 9419698 - 9419792
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||| ||||| |||||| |||||||| ||||||| ||||||||||| ||| |||||  ||||||||||||| |||||    
T  9419698 taatttgagcaaatttcgatttactccctgtcatatcttcgattttgtacagtcaaaattcatgaaagtccaaaac--aaaaaatcttcaagttaca 9419792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 15543912 - 15543993
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  15543912 taatttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 15543993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 19253588 - 19253495
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||||||| |||||| ||||| ||| ||||||||  |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  19253588 tttaccccctgttaatttgagcgaatttcggtttaacccatgccatattttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 19253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 29096923 - 29096829
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| || ||||||| |||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||||  ||||||  ||||||||||||    
T  29096923 taatttcagaaaatttcggtttaccccctgccatatcatctattttgtacaatcaaaattcatgaaggtccaaaatcaaaaaa--cttcaaattaca 29096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 41906155 - 41906073
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||| |||||   ||| ||||||||||||||    
T  41906155 atttcagtttacccccttccatatcgtcgattttgtacagtcaaaattcatgaaggtcgaaaac--caaatatcttcaaattaca 41906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 17886612 - 17886708
Alignment:
Q  185 taatttgagcaaatttcagtttaccc--cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||||||| ||||||| || ||||||||| || ||||| ||||||  ||||||||||||    
T  17886612 taatttgagaaaatttcggtttaccctccctgccatatcatcgattttgtacagtcaaagttcatgaagatccaaaaccaaaaaa--cttcaaattaca 17886708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 18755223 - 18755298
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||| ||||||  ||||||||||||||| |||||    
T  18755223 taatttgagcaaattttggtttaccccatgccatatcttcgattttgtacagttaaaattcatgaaggtccaaaac 18755298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 22846167 - 22846253
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||| | |||||||| ||||||| ||||||| ||||||| |||||    
T  22846167 tttacccccttgtaatttgaggaaatttcggtttaccccctgccata-cttcgattttgtacagtcaaaattcaagaaggtccaaaac 22846253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 36795339 - 36795426
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccct-gccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||| ||| ||| ||||| ||||||||| ||||    
T  36795339 tttaccccctgttaatttgagaaaatttcggtttacccccttgccatatcatcgattttgtacggtcaaaatttatgaaggtcaaaaa 36795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 2526521 - 2526434
Alignment:
Q  192 agcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||  |||| |||||| ||||||||||||||| || |||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  2526521 agcaaatttcgctttatcccctgacatatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 2526434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 34831681 - 34831574
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| |||||||||||||| | | ||||| |||||||||||| | |||||| ||||||| ||||||||||||| | |||||   ||||||||    
T  34831681 tttaccccctgttaatttgagcaaattccggcttacctccctgccatatctttgattttgtacagtcaaaattcatgaagggccaaaac--caaaaatct 34831584  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  34831583 tcaaattaca 34831574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 43830688 - 43830782
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||  ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  43830688 tttaccccctgttaatttgagcaaatttcgatttacccccctgttatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 43830782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 23381407 - 23381350
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttc 201  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  23381407 atggcatcaaattacaaaatttatggtactttcgccccttgtaatttgagtaaatttc 23381350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 29884093 - 29883999
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattac 280  Q
    ||||||||| ||||||| ||||||| |||| |||||||||||||||| ||||| | |||||||||||||||  |||| ||||||  |||||||||||    
T  29884093 taatttgagaaaatttcggtttacctcccttccatatcatcgattttgtacagccaaaattcatgaaggtcctaaaccaaaaaa--cttcaaattac 29883999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 38950045 - 38949952
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||| |||||||  ||||||||||  |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  38950045 tttaccccctgttaatttgagaaaatttcgatttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 38949952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 15580523 - 15580661
Alignment:
Q  141 ttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcga 240  Q
    |||||||||||||||| ||||||||| |||| | |  || | |||||||||||  |||||  |||||  |  |||||||||||||||||| ||| ||| |    
T  15580523 ttcatggcatcaaatttcaaaatttaaggtattgtctcctcttgtaatttgagagaattttggtttattct-tgccatatcatcgattttgtacggtcaa 15580621  T
Q  241 aattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||| ||||   |||||||||||||||||||    
T  15580622 aattcatgaaggtccaaaa-tcaaaaaatcttcaaattaca 15580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 16204506 - 16204586
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaa 265  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||||  ||||||||||| ||| ||||| ||||    
T  16204506 taatttgagaaaatttcggtttaccccctgccatatctttgattttgtacagttaaaattcatgaatgtccaaaaccaaaa 16204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 7318269 - 7318174
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||| | ||| | |||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  7318269 taatttgagcgaatttcggcttaactccctgccatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 7318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 16303820 - 16303919
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    |||||| |||||||||| ||||||||||||||||||| | |||||| |||  || ||||||||||| ||| |||||   |||| ||||||||||||| ||    
T  16303820 taatttcagcaaatttcggtttaccccctgccatatctttgattttgtactctcaaaattcatgaaagtccaaaac--caaaattcttcaaattacaagg 16303917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 16260686 - 16260605
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||| ||||||||||| |||| ||||||  |||||| ||||||||||||  || ||||||||||||||  |||||||||||    
T  16260686 taattggagcaaatttcggtttgccccctatcatatcttcgattttatactatcaaaattcatgaaggttcaaaacgaaaaa 16260605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 16139007 - 16138912
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| | || |||  ||||||||| |||||||| || |||| ||||||||||||||| ||||  |||||||||||  |||||||    
T  16139007 taatttgagcaaatttcgggttgccctttgccatatcttcgattttgtagagtcaaaattcatgaaggtccaaaa-taaaaaaatctttgaattaca 16138912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 776473 - 776547
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||||||||||||||  ||||||| | | ||||||| |||||||| ||| ||| ||||||||||||||| ||||    
T  776473 taatttgagcaaattttggtttacctcttaccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaa 776547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 23381341 - 23381242
Alignment:
Q  181 cctgtaatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||||||  |||  | |||||| ||||||||||||||| | ||||| ||||||||||| ||| ||||   |||||| ||||||||||    
T  23381341 cctgtaatttgagcaaattttggttaccacccctgtcatatcatcgattttgtgcagtcaaaattcatgaaagtccaaaa--taaaaaagcttcaaatta 23381244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 39752046 - 39752153
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| |||||||  ||||||  ||||| |||||||||||||| |||||||| ||| ||| |||||||| |||||| |||||   | ||||||    
T  39752046 tttaccccctgttaatttgaaaaaattttggtttagccccctgccatatcgtcgattttgtactgtcaaaattcataaaggtccaaaac--cagaaatct 39752143  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  39752144 tcaaattaca 39752153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 42223190 - 42223107
Alignment:
Q  197 atttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||| |||||||||||| || |||||   |||| |||||||||||||    
T  42223190 atttcggtttaccaccctaccatatcatcgattttgtacagtcaaaattcatgaagatccaaaac--caaaattcttcaaattaca 42223107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 943958 - 944019
Alignment:
Q  146 ggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta 207  Q
    ||||||||||||||||||||||| ||||||   || |||||||| |||||||||| ||||||    
T  943958 ggcatcaaattacaaaatttatgctactttcgtcctctgtaattcgagcaaattttagttta 944019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 4158023 - 4158117
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||||||||| ||||||||||||| | || ||| |||  || | |||||||| |||| ||||    ||||||||||||||||||    
T  4158023 taatttgagcaaatttcagtttatcccctgccatatctttgaatttgtactttcaacattcatgacggtccaaaa--tcaaaaatcttcaaattaca 4158117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 34831712 - 34831671
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  34831712 tttacccccttgtaatttgagcaaatttcagtttaccccctg 34831671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 19272914 - 19272874
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  19272914 ttttaccccctgtaatttgagcaaatttaggtttaccccct 19272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 31260794 - 31260830
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccc 210  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31260794 tttaccccctgtaatttgagtaaatttcagtttaccc 31260830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 11673798 - 11673869
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagttt-accccctgccatatcatcgattttatacagtcgaaat 243  Q
    |||||||||||| |||||||||||||||| |||| || ||||| |||||||| |||||| ||||||| ||||    
T  11673798 tttaccccctgttaatttgagcaaatttcggtttgactccctgtcatatcattgattttgtacagtcaaaat 11673869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 18755180 - 18755219
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  18755180 tttacccccttgtaatttgagcaaatttcagtttaccccc 18755219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 41567366 - 41567465
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaat 243  Q
    |||| |||||||| ||||||||| ||||||||  || | |||||||||||| | |||  ||||||||  |  ||||||||||||||| ||||||| ||||    
T  41567366 atggtatcaaatttcaaaatttaaggtactttcgcctcatgtaatttgagcgattttttgtttaccctatatcatatcatcgattttgtacagtcaaaat 41567465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 7007898 - 7007940
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgc 215  Q
    |||| |||||||||||||||| ||||||| |||||||||||||    
T  7007898 ttttgccccctgtaatttgagaaaatttcggtttaccccctgc 7007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 11673763 - 11673726
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11673763 ttcatgaaggtctaaaac-aaaaaaatcttcaaattaca 11673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 13316055 - 13315930
Alignment:
Q  152 aaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaag 251  Q
    ||||||||||||||  ||||||||  |||  ||||||||||   ||||||  |||||||||||||||||||| |||||| |  |||| ||||||||| ||    
T  13316055 aaattacaaaatttcaggtactttcgccca-tgtaatttgaaagaatttcgatttaccccctgccatatcatagattttgt--agtcaaaattcatgtag 13315959  T
Q  252 gtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||  |||||  ||| |||||||||||||||    
T  13315958 gtacaaaac-caaataatcttcaaattaca 13315930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 24759070 - 24759024
Alignment:
Q  184 gtaatttgagcaaatttcagtttaccccctgccatatcatcgatttt 230  Q
    |||||||||||||||||| ||||||| |||| ||| |||||||||||    
T  24759070 gtaatttgagcaaatttcggtttacctcctgtcatgtcatcgatttt 24759024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 29884170 - 29884208
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  29884170 ttcatgaaggtctgaaaccaaaaaaatcttcaaattaca 29884208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 36525522 - 36525488
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||||||||| ||||||||||||||||||    
T  36525522 ccccctgtaatttgaggaaatttcagtttaccccc 36525488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 18756505 - 18756546
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  18756505 tttacccccttgtaatttgagcaaatttcggtttaccccctg 18756546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 776402 - 776438
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  776402 accccctgtaatttgagcaaatttaggtttaccccct 776438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 9419627 - 9419663
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  9419627 accccctgtaatttgagcaaatttaggtttaccccct 9419663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 22984085 - 22984017
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaagg 252  Q
    ||||||||||||||||  ||||| | |||||||||||| |||||||| ||| ||| |||||||| ||||    
T  22984085 taatttgagcaaattttggtttagctccctgccatatcgtcgattttgtactgtcaaaattcataaagg 22984017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 24217032 - 24217127
Alignment:
Q  186 aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacat 282  Q
    |||||||||||||||  ||||||||||| | ||||| |||||||| |||| |  |||||||| || ||  |||||  ||| ||||||||||||||||    
T  24217032 aatttgagcaaattttggtttaccccctacaatatcgtcgattttgtacaattaaaattcataaaagttcaaaac-caaagaatcttcaaattacat 24217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 25293464 - 25293532
Alignment:
Q  179 cccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcat 247  Q
    ||||||||||||||||||||||   |||||||||   |||||| ||||||||||||  || ||||||||    
T  25293464 cccctgtaatttgagcaaattttgatttacccccgatcatatcttcgattttatacgatcaaaattcat 25293532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 31122203 - 31122167
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  31122203 accccctgtaatttgagcaaatttaggtttaccccct 31122167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 39752020 - 39752056
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  39752020 ccccctgtgatttgagcaaatttcggtttaccccctg 39752056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 41100846 - 41100794
Alignment:
Q  208 ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||||||||||||  |||||||| ||| ||| ||||||||||||||| |||||    
T  41100846 ccccctgccatatagtcgattttgtactgtcaaaattcatgaaggtccaaaac 41100794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 137 - 279
Target Start/End: Original strand, 45687732 - 45687873
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||| |||||||||  |||||  ||||| |||||| ||||||||||||||| ||| |    
T  45687732 gaccttcatggcatcaaattataaaatttaaggtactttcaccccctataatttgagagaattttggtttatcccctgtcatatcatcgattttgtacgg 45687831  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    || |||||||||||||||||||||| ||| |||||||||||||    
T  45687832 tcaaaattcatgaaggtctaaaacg-aaataatcttcaaatta 45687873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 137 - 284
Target Start/End: Original strand, 2936231 - 2936376
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||  |||||  ||||| |||||| ||||||||||||||| |||||    
T  2936231 gaccttcatgacatcaaattacaaaatttaaggtactttcgccccctgtaatttgagagaatttgggttta-cccctgtcatatcatcgattttgtacag 2936329  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    || ||||| ||||||||| |||||  ||| ||||||||||||||||||    
T  2936330 tcaaaatttatgaaggtcgaaaac-caaagaatcttcaaattacatgg 2936376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 31749507 - 31749402
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttc 273  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||| ||||||  ||||    
T  31749507 tttaccccctgcaatttgagcaaatttcgatttaccccctgccatatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaa--cttc 31749410  T
Q  274 aaattaca 281  Q
    ||||||||    
T  31749409 aaattaca 31749402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 11576769 - 11576863
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||||||||||| |||||  |||||||||||||||||||    
T  11576769 taatttgagcaaatttcggtttaccccctgccatatcttcgatttcgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaaattaca 11576863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 31308027 - 31307933
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||| |||||  |||||||||||||||||||    
T  31308027 taatttgagcaaatttcggtttgccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaaattaca 31307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 27082650 - 27082780
Alignment:
Q  149 atcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatg 248  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||  |||||  |||||||||||||||||| ||||| ||||| ||||| ||||||||     
T  27082650 atcaaattacaaagtttaaggtactttcgccccctgtaatttgagataattttggtttaccccctgccatattatcga-tttatccagtcaaaattcata 27082748  T
Q  249 aaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||  ||| |||||||||||||||    
T  27082749 aaggtctaaaac-caaataatcttcaaattaca 27082780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 27195651 - 27195521
Alignment:
Q  149 atcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatg 248  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||  |||||  |||||||||||||||||| ||||| ||||| ||||| ||||||||     
T  27195651 atcaaattacaaagtttaaggtactttcgccccctgtaatttgagataattttggtttaccccctgccatattatcga-tttatccagtcaaaattcata 27195553  T
Q  249 aaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||  ||| |||||||||||||||    
T  27195552 aaggtctaaaac-caaataatcttcaaattaca 27195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 442711 - 442617
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  442711 taatttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaagttaca 442617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 15012021 - 15011882
Alignment:
Q  141 ttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcga 240  Q
    |||| ||||||||||||||||||| | |||| ||||| || | ||||||||||  |||||| |||||||| ||||||||||||||||||| ||| ||| |    
T  15012021 ttcacggcatcaaattacaaaattcaaggtatttttatcctcggtaatttgagagaatttcggtttaccctctgccatatcatcgattttgtaccgtcaa 15011922  T
Q  241 aattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| ||||  |||||  ||| |||||||||||||||    
T  15011921 aattcatgcaggttcaaaac-caaagaatcttcaaattaca 15011882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 31863902 - 31864003
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaat 277  Q
    ||||||| |||||||||||||||| ||||||||| || ||||||||||||||| ||||||| | ||||||||||||| ||||| ||||||  ||||||||    
T  31863902 ccccctgcaatttgagcaaatttcggtttaccccttgtcatatcatcgattttgtacagtcaagattcatgaaggtccaaaaccaaaaaa--cttcaaat 31863999  T
Q  278 taca 281  Q
    ||||    
T  31864000 taca 31864003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 24233485 - 24233391
Alignment:
Q  174 tttaccccctgta-atttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||||||||  ||||||| |||||||||||||| |||  ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||    
T  24233485 tttaccccctgttgatttgagtaaatttcagtttacaccccaccatatcatcgattttatatagtcaaaattcatgaaggtctaaaaccaaaaaa 24233391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 5864644 - 5864738
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| |||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  5864644 taatttgatcaaatttcggttttccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 5864738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 12005462 - 12005556
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||||||||| ||| |||||  ||||||||||||| |||||    
T  12005462 taatttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaagtccaaaac--aaaaaatcttcaagttaca 12005556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 13264057 - 13263951
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||   ||||||||||| |||||| |||||||| ||||||| ||||||||||||||| |||||   |||||||||    
T  13264057 tttaccccctgttaatttgagcaaatttagatttaccccctgacatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatctt 13263960  T
Q  273 caaattaca 281  Q
    |||||||||    
T  13263959 caaattaca 13263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 24812988 - 24812844
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgattttataca 235  Q
    |||||| | ||||||||||||||||||||| |||||||| | ||| ||||||||||   |||||  ||||| ||||||| ||||||||||||| | | ||    
T  24812988 gacctttaaggcatcaaattacaaaatttaaggtactttcatcccttgtaatttgaaagaattttggtttatccccctgtcatatcatcgattatgtgca 24812889  T
Q  236 gtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||| |||||||||||| |||||||| |||| ||| |||||||||||    
T  24812888 gtcaaaattcatgaagatctaaaac-aaaagaattttcaaattaca 24812844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 26254744 - 26254850
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| ||| |||  |||||||||| |||||||| ||||||| ||||||||||||||| |||||   |||||||||    
T  26254744 tttaccccctgttaatttgagcaaatttcggttaaccttctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatctt 26254841  T
Q  273 caaattaca 281  Q
    |||||||||    
T  26254842 caaattaca 26254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 32199956 - 32200054
Alignment:
Q  181 cctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattac 280  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||| || |||||||||||| ||||  ||||||  |||||||||||    
T  32199956 cctgcaatttgagcaaatttcggtttaccccctaccatatcatcgattttgtacagtcaaagttcatgaaggtccaaaattaaaaaa--cttcaaattac 32200053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 32946474 - 32946368
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| | |||||||  ||||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||| ||||||  |||    
T  32946474 tttacccccttgcaatttgaaaaaatttcggtttaccccctgccatatcatcgattttgtacagttaaaattcatgaaggtccaaaaccaaaaaa--ctt 32946377  T
Q  273 caaattaca 281  Q
    |||||||||    
T  32946376 caaattaca 32946368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 47370329 - 47370235
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||||||||||||| ||||   ||||||||||||| |||||    
T  47370329 taatttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaa--taaaaaatcttcaagttaca 47370235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 14187785 - 14187873
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||| || ||||| ||||||| |||||||| |||||||||||| |||||    
T  14187785 ccccttgtaatttgagcaaatttcggtttaccccctgctatatcttcaattttgtacagtcaaaattcattaaggtctaaaaccaaaaa 14187873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 17051993 - 17051898
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||   ||||||| |||||||||||    
T  17051993 taatttgagcaaattttggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-tcaaaaaatattcaaattaca 17051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 10067943 - 10067836
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||| ||| ||||| ||||||||| ||||   |||||| ||    
T  10067943 tttaccccctgttaatttgagcaaatttcggtttactcccctgccatatcatcgattttgtacggtcaaaatttatgaaggtccaaaa--taaaaaaact 10067846  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  10067845 tcaaattaca 10067836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 20055007 - 20055113
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| |||||||||||||||||| |||||||| ||| |||||| || ||||| ||||||| ||||||||||| ||| |||||   |||||||||    
T  20055007 tttacccccttgtaatttgagcaaatttcggtttaccctctgtcatatcttcaattttgtacagtcaaaattcatgaaagtccaaaac--caaaaatctt 20055104  T
Q  273 caaattaca 281  Q
    |||||||||    
T  20055105 caaattaca 20055113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 31750896 - 31750802
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||| ||||||| |||||||||||| || ||||   ||||||| |||||||||||    
T  31750896 taatttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaagatccaaaa--taaaaaattttcaaattaca 31750802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 10975713 - 10975621
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||| ||| || |||||||| ||| ||||| |||||    
T  10975713 tttagcccctgtaatttgagcaaatttcggtttaccccctatcatatcatcgattttgtactgtcaaagttcatgaaagtcgaaaaccaaaaa 10975621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 34258324 - 34258397
Alignment:
Q  204 tttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||  |||||| ||||||||||    
T  34258324 tttaccccctgccatatcatcgattttgtacagtcaaaattcatgaagatctaaaac--aaaaaaacttcaaatta 34258397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 1853260 - 1853184
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  1853260 gtttaccccctgtcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 1853184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 2240619 - 2240702
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||| ||||| ||||||    
T  2240619 taatttgagaaaatttcggtttacccccctgccatatcatcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaaa 2240702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 9689332 - 9689419
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatc 224  Q
    |||||||||| |||||||||| |||||||| |||||||||  ||| |||||||||||  |||||| ||||||||||| ||||||||||    
T  9689332 gaccttcatgacatcaaattataaaatttaaggtacttttgtcccttgtaatttgagagaatttcggtttaccccctaccatatcatc 9689419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 17155783 - 17155693
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatt 278  Q
    ||||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| |||||   |||||||||||||||    
T  17155783 taatttgagcaaatttcggtttacccc-tgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaatt 17155693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 20164290 - 20164384
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||| |||||||| ||||| |||||||| ||||||| |||||||| |||||| ||||| |||||    
T  20164290 tttaccccctgttaatttgagcaaatttcggtttacccccctgctatatcttcgattttgtacagtcaaaattcattaaggtccaaaaccaaaaa 20164384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 43393964 - 43393874
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| ||||||||   ||| |||||  ||||  |||||||||||||||||||| ||| |||||||    
T  43393964 gaccttcatggcatcaaattacaaaatttaaggtactttcgacccttgtaacgtgagagaatttcagtttaccccctgctataccatcgat 43393874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 2624758 - 2624851
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||||||||| || ||| |||||| |||||||| |||| || ||||||||||||||  ||||| |||||    
T  2624758 tttaccccctgttaatttgagcaaatttcagtttatcctctgtcatatcttcgattttgtacaatcaaaattcatgaaggtacaaaaccaaaaa 2624851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 21444064 - 21444158
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  |||||||||||| |||||| || ||||| ||| ||| ||||||||||||||| |||||  |||||| ||||||||||||    
T  21444064 taatttgagcaaattttggtttaccccctgtcatatcttcaattttgtactgtcaaaattcatgaaggtccaaaac--aaaaaaacttcaaattaca 21444158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 35158358 - 35158265
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| || |||| ||||||||||||||| ||||    ||||||||||||||||||    
T  35158358 taatttgagcaaatttcggtttaccccc-gccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaa--tcaaaaatcttcaaattaca 35158265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 43707125 - 43707219
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||||| ||||||| || |||||| | |||||| ||||||| ||||||||||||| | |||||   ||||||||||||||||||    
T  43707125 taatttgagcaaatttcagcttaccccttgtcatatctttgattttgtacagtcaaaattcatgaagggccaaaac--caaaaatcttcaaattaca 43707219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 2514113 - 2514205
Alignment:
Q  187 atttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||| |||||||| |||| |||||||||||||| ||||||| ||||||| ||||||| ||||    ||||||||||||||||||    
T  2514113 atttgaacaaatttcggtttaccctctgctatatcatcgattttgtacagtcaaaattcacgaaggtccaaaa--tcaaaaatcttcaaattaca 2514205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 8391140 - 8391065
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||||||||||||||| ||||||  ||||||||||||||| ||||| ||||||| ||||||||||||||| ||||    
T  8391140 taatttgagcaaatttcggtttacgaccctgccatatcatctattttgtacagtcaaaattcatgaaggtccaaaa 8391065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 2241041 - 2241148
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| ||||| || ||||||| |||||||||| || ||||| ||||||||| ||| ||| ||||||||||||||| ||||| ||||||  ||    
T  2241041 tttaccccctgttaattttagaaaatttcggtttacccccctgacatattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaa--ct 2241138  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  2241139 tcaaattaca 2241148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 3092337 - 3092422
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcat 223  Q
    ||||||||  |||||||||| |||||||| |||||||| ||||||| |||||||||  |||| | ||||||||||| |||||||||    
T  3092337 accttcattacatcaaattataaaatttaaggtactttcaccccctataatttgagagaattacggtttacccccttccatatcat 3092422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 15635251 - 15635169
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||| ||||||||| |||||||||||| ||||||||| ||  ||||||||||||||| |||||   ||||||||||||||||||    
T  15635251 atttcggtttaccccatgccatatcatctattttatacggttaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 15635169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30632173 - 30632080
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||||| ||||||||| || ||||| | ||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  30632173 taatttgagtaaatttcggtttacccc-tgccatatcttcaattttgtgcagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 30632080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 36374322 - 36374228
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||| | |||||| |||||||||||| | |||||| |||  || ||||||||||||||| |||||   ||||||||||||||||||    
T  36374322 taatttgagcaaattccggtttactccctgccatatctttgattttgtactatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 36374228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 38131023 - 38130917
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||| |||||| |||||| |||||||||  ||||||| ||||||||||| |||||||| |||| |  | ||||||||||||| |||||   |||||||||    
T  38131023 tttttccccctttaattttagcaaattttggtttacctcctgccatatcttcgattttgtacaattaacattcatgaaggtccaaaac--caaaaatctt 38130926  T
Q  273 caaattaca 281  Q
    |||||||||    
T  38130925 caaattaca 38130917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 40938292 - 40938211
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||| |||| ||| ||||| ||||||||||||  |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  40938292 taatttgaacaaacttcggtttatcccctgccatattttcgattttgtactgtcaaaattcatgaaggtctaaaaccaaaaa 40938211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 13592874 - 13592789
Alignment:
Q  195 aaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||| |||| ||||||||| |||||||||| ||| ||||||||||||||| |||||  |||||| ||||||||||||    
T  13592874 aaatttcggtttacctccctaccatatcattgattttatactgtcaaaattcatgaaggtccaaaac--aaaaaaacttcaaattaca 13592789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 28696700 - 28696628
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccc-cctgtaatttgagcaaatttcagtttac 208  Q
    |||||||| | ||||||||||||||| |||||||||||||||||   ||||||||||||||||||| ||||||    
T  28696700 gaccttcaagacatcaaattacaaaacttatggtacttttacccttttgtaatttgagcaaatttcggtttac 28696628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 1853354 - 1853266
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||| ||||||||| ||||||||   |||||| ||||||||  ||||||   |||||||||||| ||||||||||    
T  1853354 gaccttcatggcatcaaatttcaaaatttaaggtactttcgtcccctgaaatttgagagaatttc--gttaccccctgccttatcatcgat 1853266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 25601843 - 25601984
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    |||||||||  ||||||||||||||||||  |||||||  ||||||||||||| ||  |||||| ||| | ||| ||  |||||||| || || ||||||    
T  25601843 accttcatgatatcaaattacaaaatttaatgtactttcgccccctgtaattttagagaatttcggttca-cccatgttatatcatcaatattgtacagt 25601941  T
Q  238 cgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    | ||||||||||| || ||||||   ||||||||||||||||||    
T  25601942 caaaattcatgaatgtttaaaac-cgaaaaatcttcaaattaca 25601984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 27485012 - 27484941
Alignment:
Q  140 cttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    ||||||||||| |||||| |||||||| | ||||||||||| || |||||||||  ||||||||||||||||    
T  27485012 cttcatggcattaaattaaaaaatttaagatacttttaccctctataatttgagagaatttcagtttacccc 27484941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 2924147 - 2924093
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  2924147 tgtaattttagcaaatttcggtttaccccctgccatatcattgattttgtacagt 2924093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 3401979 - 3401884
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||  |||||| ||||| ||||||| |||||| |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  3401979 taatttgagtgaatttcggtttagccccctgacatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 3401884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 10932057 - 10931974
Alignment:
Q  197 atttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||| ||||| ||||||||||||||| |||| || ||||||||||||||| |||||   |||| |||||||||||||    
T  10932057 atttcagtttaccaccctgtcatatcatcgattttgtacaatcaaaattcatgaaggtccaaaac--caaaattcttcaaattaca 10931974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 11625218 - 11625132
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcat 223  Q
    |||||||||| |||||||||||| |||||| ||||||||  |||| |||| |||| |  |||||| ||||||||||| |||||||||    
T  11625218 gaccttcatgacatcaaattacataatttaaggtactttcgccccttgtagtttgtgagaatttcggtttaccccctaccatatcat 11625132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 17167689 - 17167595
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    |||||||||||| ||||| || |||||||  ||||||||||| ||||||||||||||| || |||| ||||| ||||| ||| ||||| ||||||    
T  17167689 tttaccccctgttaatttaagtaaatttcgatttaccccctgtcatatcatcgattttgtatagtcaaaatttatgaatgtccaaaaccaaaaaa 17167595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 42957468 - 42957558
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||| ||||||||||||||||||| ||||||||   ||| |||||||||||  ||||||  ||||||| ||| |||||| |||||    
T  42957468 gaccttcatgacatcaaattacaaaatttaaggtactttcgtcccttgtaatttgagagaatttcgatttaccctctgtcatatcctcgat 42957558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 1572912 - 1572814
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    |||||| || |||||||  |||||||||||||||||||||||| || ||||| | || ||| |||||||| |||||   | |||||||||||||||||||    
T  1572912 taatttaagaaaatttcgatttaccccctgccatatcatcgatgttgtacagacaaagttcttgaaggtccaaaac--tagaaatcttcaaattacatgg 1572815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 15721106 - 15721025
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||  |||||||||||  |||||| |||||||| | | ||| ||||||||||||||| ||||| |||||    
T  15721106 taatttgagcaaatttatgtttaccccctatcatatcttcgattttgtgctgtcaaaattcatgaaggtccaaaaccaaaaa 15721025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 41380577 - 41380471
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| ||||||||| | |||| ||||| ||| ||||||||  |||||||| ||  ||| ||||||||||||||| |||||  ||||||||||    
T  41380577 tttaccccctgttaatttgagcgattttcggtttaacccatgccatattttcgattttgtaatgtcaaaattcatgaaggtccaaaac--aaaaaatctt 41380480  T
Q  273 caaattaca 281  Q
    ||| |||||    
T  41380479 caacttaca 41380471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 46146243 - 46146337
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| ||||||||||| ||| ||  |||||||| ||||||| ||||| ||||||||| ||||| |||| ||  |||||||||||    
T  46146243 taatttaagcaaatttcggtttacccccttccaaattttcgattttgtacagtcaaaatttatgaaggtccaaaacaaaaagaa--ttcaaattaca 46146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 2300999 - 2300924
Alignment:
Q  186 aatttgagcaaatttcagttta--ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||| || ||||||| |||||  ||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  2300999 aatttaagaaaatttcggtttaacccccccgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaa 2300924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 38192771 - 38192856
Alignment:
Q  195 aaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||| |||| ||||||||| |||||| ||| ||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  38192771 aaatttcggtttacctccctaccatatcattgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 38192856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 10068008 - 10068046
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10068008 ttcatgaaggtctaaaaccaaaaaaatcttcaaattaca 10068046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 10975773 - 10975703
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||||||||||||| |||||||||||   ||| ||||||||||| ||||||  ||||| ||||||    
T  10975773 atggcatcaaattacaaaatctatggtactttcgtcccttgtaatttgagtaaatttatgtttagcccctg 10975703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 13253525 - 13253463
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcat 247  Q
    ||||||||||||||||   ||||||||||| |||||| |||||||| ||||||| ||||||||    
T  13253525 taatttgagcaaattttgatttaccccctgacatatcttcgattttgtacagtcaaaattcat 13253463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 15635342 - 15635252
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgat 227  Q
    ||||| ||| ||||||||| ||||||||||||||||||  |||||| ||| |||||  ||||||  |||| |||||| |||||||||||||    
T  15635342 acctttatgccatcaaatttcaaaatttatggtactttcgccccctataacttgagagaatttcgttttacccccctaccatatcatcgat 15635252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 19093250 - 19093197
Alignment:
Q  184 gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtc 238  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||    
T  19093250 gtaatttgagaaaatttcagttta-cccctaccatatcatcgattttgtacagtc 19093197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 21022556 - 21022651
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||  ||||| |||| |||||| || |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  21022556 taatttgagcgaattttggtttagccccatgccatgtcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 21022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 33441062 - 33441157
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||| ||  | |||||||||| ||||| |||| || ||||||||||||||| |||||   | ||||||||||||||||    
T  33441062 taatttgagcaaatttcggtttactcctgtaccatatcatctattttgtacaatcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 33441157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 15994691 - 15994650
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  15994691 ttttgccccctgtaatttgaacaaatttcagtttaccccctg 15994650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 21522000 - 21522062
Alignment:
Q  217 atatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  21522000 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaagttaca 21522062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 18268322 - 18268270
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    |||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  18268322 taatttgagcgaatttcggtttaccccctgctatatcatcgattctgtacagt 18268270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 19377146 - 19377094
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatt 189  Q
    |||||||||||| ||||||||||||||||| ||||||||  |||| |||||||    
T  19377146 gaccttcatggcgtcaaattacaaaatttaaggtactttcgccccttgtaatt 19377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 35158434 - 35158394
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  35158434 ttttaccccctgtaatttgagcaaatttaggtttaccccct 35158394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 14675639 - 14675742
Alignment:
Q  158 caaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtcta 256  Q
    |||||||||  |||||||| ||||||||||||||||  |||||  ||||||||| |||| ||||| |||||||| ||| ||  |||||||  |||||| |    
T  14675639 caaaatttaaagtacttttgccccctgtaatttgagagaattttggtttacccctctgcaatatcgtcgattttgtacggttaaaattcacaaaggtcca 14675738  T
Q  257 aaac 260  Q
    ||||    
T  14675739 aaac 14675742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 22859369 - 22859439
Alignment:
Q  140 cttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    ||||||||| |||| |||||||||||||||||||||   ||  ||||||||||||||||||  |||||||||    
T  22859369 cttcatggcttcaagttacaaaatttatggtactttcgtcca-tgtaatttgagcaaattttggtttacccc 22859439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 3092434 - 3092509
Alignment:
Q  204 tttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| || |||||| |||||||| ||||||| ||||| ||||||||| |||   | ||||||||||||||||||    
T  3092434 tttaccccatgtcatatcgtcgattttgtacagtcaaaattaatgaaggtccaaat--acaaaaatcttcaaattaca 3092509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 20089305 - 20089339
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttacccc 211  Q
    |||||||||||||||||||||||||| ||||||||    
T  20089305 accccctgtaatttgagcaaatttcaatttacccc 20089339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 32946509 - 32946546
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32946509 ttcatgaaggtctaaaac-aaaaaaatcttcaaattaca 32946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 43393873 - 43393803
Alignment:
Q  197 atttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||| |||||| ||||||| |||||||| ||| ||| ||||||||||| ||| ||||| |||||    
T  43393873 atttcagtttatcccccttccatatcgtcgattttgtacggtcaaaattcatgaatgtcaaaaaccaaaaa 43393803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 9689471 - 9689524
Alignment:
Q  213 tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||||| |||||||  |||||||||||| | ||||| |||||    
T  9689471 tgccatatcatcgattttgtacagtcataattcatgaaggaccaaaaccaaaaa 9689524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 17167720 - 17167679
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||| |||||||||||||||| ||||||| ||||||||||||    
T  17167720 tttttccccctgtaatttgaggaaatttcggtttaccccctg 17167679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 26876689 - 26876742
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtc 238  Q
    ||||||||||||||||  ||  || ||||||||||||||||||||| |||||||    
T  26876689 taatttgagcaaattttggtccactccctgccatatcatcgattttgtacagtc 26876742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 28696626 - 28696585
Alignment:
Q  172 cttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||| |||||||||||||||||||||||| |||||| ||||    
T  28696626 cttttgccccctgtaatttgagcaaatttcggtttactccct 28696585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 42957572 - 42957642
Alignment:
Q  209 cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||| |||||| |||| || || |||||||||||| |||||   ||||||||||||||||||    
T  42957572 cccctgctatatcattgattttgtacaatcaaagttcatgaaggtcgaaaac--caaaaatcttcaaattaca 42957642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 2241015 - 2241051
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  2241015 ccccctgcaatttgagcaaatttcggtttaccccctg 2241051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 2918842 - 2918790
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgatttt 230  Q
    |||| |||||||| |||||||||  | ||||||||||||||||||| ||||||    
T  2918842 ccccttgtaattttagcaaattttggcttaccccctgccatatcattgatttt 2918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 5864568 - 5864608
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  5864568 ttttaccccctgtaatttgagcaaatttagttttaccccct 5864608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 13592966 - 13593001
Alignment:
Q  245 catgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13592966 catgaaggtctaaaac-aaaaaaatcttcaaattaca 13593001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 15994697 - 15994733
Alignment:
Q  245 catgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  15994697 catgaaggtccaaaacgaaaaaaatcatcaaattaca 15994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 17155822 - 17155786
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  17155822 accccctgtaatttgagcaaatttaggtttaccccct 17155786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 21521943 - 21521979
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  21521943 accccctataatttgagcaaatttaagtttaccccct 21521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 22969258 - 22969330
Alignment:
Q  195 aaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||| ||||||| |||| ||||||||| |||||| ||| ||| || |||||||||||| ||||| |||||    
T  22969258 aaatttcggtttacctccctaccatatcattgattttgtactgtcaaagttcatgaaggtccaaaaccaaaaa 22969330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 27484904 - 27484835
Alignment:
Q  213 tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    |||||||||| | ||||| ||||||| |||||||||||| || ||||    |||||||||||||||||||||    
T  27484904 tgccatatcaccaattttgtacagtcaaaattcatgaagatccaaaa--tcaaaaatcttcaaattacatgg 27484835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 137 - 284
Target Start/End: Original strand, 9780436 - 9780584
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc--ctgccatatcatcgattttatac 234  Q
    ||||| ||||||||||||||| |||||||| |||||||| | |||||||||||||||  |||||| |||||||||  ||||||||||||||||||| |||    
T  9780436 gacctacatggcatcaaattaaaaaatttaaggtactttcatcccctgtaatttgagataatttcggtttaccccttctgccatatcatcgattttctac 9780535  T
Q  235 agtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    |||| ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  9780536 agtcaaaattcatgaaggtccaaaac-caaataatcttcaaattacatgg 9780584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 2032601 - 2032708
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||    
T  2032601 tttacccccttgtaatttgagcaaatttcggtttacccccctgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaaatct 2032700  T
Q  272 tcaaatta 279  Q
    ||||||||    
T  2032701 tcaaatta 2032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 42056155 - 42056061
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  42056155 taatttgagcaaatttcggtttaccccctgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 42056061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 29104337 - 29104242
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||  |||||||||||||||||||    
T  29104337 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagttaaaattcatgaaggtctaaaac-caaaaaatcttcaaattaca 29104242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 137 - 281
Target Start/End: Original strand, 49277771 - 49277914
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |  ||||||| |||||||||||| |||||||| ||||| ||  |    
T  49277771 gaccttcatggcatcaaattacaaaatttaaggtacttttgccctctgtaatttgcgagaatttcaatttaccccctgcgatatcatcaattttgtatcg 49277870  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || ||||| ||||||||  |||||  ||| |||||||||||||||    
T  49277871 tcaaaatttatgaaggttcaaaac-caaataatcttcaaattaca 49277914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 49296188 - 49296294
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||||||    
T  49296188 tttaccccctgttaatttgagcaaatttcggtttgccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatctt 49296285  T
Q  273 caaattaca 281  Q
    ||| |||||    
T  49296286 caagttaca 49296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 32682357 - 32682464
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||    
T  32682357 tttaccccctgttaatttgagaaaatttcggtttacccccctgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--ct 32682454  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  32682455 tcaaattaca 32682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 41325399 - 41325492
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |||||    
T  41325399 tttaccccctgttaattttagcaaatttcggtttaccccctgctatatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaaaa 41325492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 25244551 - 25244652
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaat 277  Q
    ||||||| ||||||||||| |||| |||||||||||  ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||    
T  25244551 ccccctgcaatttgagcaattttcggtttaccccctatcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaat 25244648  T
Q  278 taca 281  Q
    ||||    
T  25244649 taca 25244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 3652447 - 3652353
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  3652447 taatttaagcaaatttcggtttaccccatgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 3652353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 4102965 - 4102891
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | |||||||||| |||||||    
T  4102965 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaatattcatgaagatctaaaa 4102891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 17696254 - 17696357
Alignment:
Q  176 taccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaa 275  Q
    |||||||| |||| | |||||||||  ||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||    
T  17696254 taccccctataatataagcaaattttggtttaccccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaa 17696351  T
Q  276 attaca 281  Q
    ||||||    
T  17696352 attaca 17696357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 18165087 - 18165182
Alignment:
Q  185 taatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| |||||   | ||||||||||||||||    
T  18165087 taatttgagcaaatttcggtttactcccctgccatatcatctattttgtacagtcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 18165182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 22854153 - 22854059
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccct-gccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||||||||||||||| |  ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  22854153 tttaccccctgttaatttgagcaaatttcagtttacccccttgttatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 22854059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 23184932 - 23184839
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||||| ||||||| ||||||||||||||| ||| |   ||||||||||||||||||    
T  23184932 taatttgagcaaacttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaacc---aaaaatcttcaaattaca 23184839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 5283855 - 5283766
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||| |||||||| |||||| || |||| ||||||||||   |||||| ||||||||||||| |||||||||||    
T  5283855 accttcatggcatcaaattaaaaaatttaaggtactcttgccccttgtaatttgaaggaatttcggtttaccccctgcaatatcatcgat 5283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 18510159 - 18510065
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||| ||||| |||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  18510159 taatttgagcaaatttcgatttactccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaagttaca 18510065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 26040705 - 26040800
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||| |||||||  ||||||||||||||||| | || ||||| ||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  26040705 taatttgatcaaattttggtttaccccctgccatagcttcaattttgtacggtcaaaattcatgaaggtccaaaac-aaaaaaatcttcaaattaca 26040800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 13555709 - 13555796
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatc 224  Q
    |||||||||| |||||||||| |||||||| |||||||||  ||| |||||||||||  |||||| ||||||||||| ||||||||||    
T  13555709 gaccttcatgacatcaaattataaaatttaaggtacttttgtcccttgtaatttgagagaatttcggtttaccccctaccatatcatc 13555796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 16734307 - 16734162
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta--ccccctgccatatcatcgattttatac 234  Q
    |||||||||||||| ||||||||||||||| |||| |||  | ||||||||||||||  ||||||||||||  || || | |||||||| |||||  ||     
T  16734307 gaccttcatggcataaaattacaaaatttaaggtattttcgcaccctgtaatttgagagaatttcagtttagccctcccgtcatatcattgatttcgtag 16734208  T
Q  235 agtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||| |||||||||||| ||||||||  | | |||||||||||||||    
T  16734207 agtcaaaattcatgaagctctaaaac-catagaatcttcaaattaca 16734162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 24675458 - 24675362
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||| ||||||  ||||||| ||||||||||| |||||||| |||| |||||||||||||||||| |||||   ||| ||||||||||||||    
T  24675458 tgtaatttgagtaaattttggtttacctcctgccatatcttcgattttgtacaatcgaaattcatgaaggtccaaaac--caaatatcttcaaattaca 24675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 29700681 - 29700602
Alignment:
Q  180 ccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||||||||||||| |||||||||||||||| ||| |||| ||||||||| ||||||  ||||||||||||||| ||||    
T  29700681 ccctgtaatttgagcgaatttcagtttaccccttgcaatatgatcgattttgtacagtaaaaattcatgaaggtcaaaaa 29700602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 30919105 - 30919000
Alignment:
Q  173 ttttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||| |||||||| |||||||| ||||||| ||  ||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||    
T  30919105 ttttcccccctgttaatttgagtaaatttcggt--accccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatct 30919010  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  30919009 tcaaattaca 30919000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 39133273 - 39133169
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| ||||||||||||||||  |||  ||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   |||||||||    
T  39133273 tttaccccctgttaatttgagcaaatttcgatttgtcccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatctt 39133176  T
Q  273 caaatta 279  Q
    |||||||    
T  39133175 caaatta 39133169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 21508001 - 21507921
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  21508001 taatttgagcaaatttcggtttacccc-tgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 21507921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 31857070 - 31856976
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||| |||||| ||||||| || ||||| ||||||| || ||||||||||||||||||   | ||||||||||||||||    
T  31857070 taatttgagcaaatttctgtttgccccctaccatatcttcaattttgtacagtcaaagttcatgaaggtctaaaac--cagaaatcttcaaattaca 31856976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 49166822 - 49166741
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  49166822 taatttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 49166741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 50773466 - 50773366
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatg 283  Q
    ||||||||| ||||||| |||||||||| || |||||| |||||||| ||| ||| ||||||||||||||| |||||   |||||||||||||||||| |    
T  50773466 taatttgagaaaatttcggtttacccccctgtcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattacaag 50773369  T
Q  284 gaa 286  Q
    |||    
T  50773368 gaa 50773366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 8810134 - 8810044
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||| |||||||||| |||||||| ||||||||   ||| ||||||||||| ||||||| |||||||||||  ||| ||||||||    
T  8810134 gaccttcatgacatcaaattataaaatttaaggtactttcgtcccgtgtaatttgagaaaatttcggtttaccccctatcatgtcatcgat 8810044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 16875981 - 16876066
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcat 223  Q
    |||||| ||||||||||||||||||||||| |||| ||||  |||||||||||||||  |||||| |||||  ||||||||||||||    
T  16875981 gacctttatggcatcaaattacaaaatttaaggtatttttgtcccctgtaatttgagagaatttcggttta-tccctgccatatcat 16876066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 30409303 - 30409398
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||||| ||||||  | ||| ||||||||||||||||||||||  ||||||||||||||| ||||| ||||||  ||||||||||||    
T  30409303 taatttgggcaaatttctgtttacttctctgtcatatcatcgattttatacagttaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 30409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 7913312 - 7913392
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||| |||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  7913312 taattttagcaaatttcggtttacccc-tgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 7913392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 14946146 - 14946053
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||| |||| |||||||| |||||||||||  ||| |||||| |||| ||| ||||| |||||    
T  14946146 tttaccccctgttaatttgagcaaatttcggtttatcccccgccatatcttcgattttatattgtcaaaattcttgaaagtccaaaaccaaaaa 14946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 40568193 - 40568274
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    ||||||||||||| |||||| ||   ||||||||||| |||||||| |||||| || |||||||||||||||||||| ||||    
T  40568193 ccccctgtaatttaagcaaaattttttttaccccctgtcatatcattgattttgtaaagtcgaaattcatgaaggtccaaaa 40568274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 14121470 - 14121539
Alignment:
Q  210 ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||| ||||| ||||||  ||||||||||||    
T  14121470 ccctgccatatcatcgattttgtacagtcaaaattcatgaaagtccaaaaccaaaaaa--cttcaaattaca 14121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 49533288 - 49533146
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| |||||||||||||||||||  ||| |||| |||| | |||||||||  ||||||  |||| || || | |||||||| ||||| ||||     
T  49533288 gaccttcatgacatcaaattacaaaatttaacgtatttttgccccttataatttgagagaatttcgatttatcctctcctatatcatcaattttgtacat 49533189  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || ||||| ||||| ||| |||| | |||||||||||||||||||    
T  49533188 tcaaaatt-atgaaagtccaaaatg-aaaaaatcttcaaattaca 49533146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 42161472 - 42161381
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccc-cctgccatatcatcgat 227  Q
    |||||| | ||||||||||||||||||||| ||||||||  | || |||||||||||  ||||||  ||||||| |||||||||||||||||    
T  42161472 gaccttgaaggcatcaaattacaaaatttaaggtactttcgctccttgtaatttgagagaatttcgatttaccctcctgccatatcatcgat 42161381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 5514553 - 5514648
Alignment:
Q  185 taatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||||| ||||||| || |||||||| | ||||| |||||||| |||||| |||||   ||||||||||||||||||    
T  5514553 taatttgagaaaatttcggtttacccccctgccatttcttcgattttgtgcagtcaaaattcataaaggtccaaaac--caaaaatcttcaaattaca 5514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 46088207 - 46088141
Alignment:
Q  203 gtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaa 268  Q
    |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||    
T  46088207 gtttacccccatgtcatatcatcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaaaaaa 46088141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 15786071 - 15786002
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtc 254  Q
    ||||||||| ||||||||||||||| |||| |||||| |||||||| ||| ||| ||||||| |||||||    
T  15786071 taatttgagtaaatttcagtttacctcctgtcatatcttcgattttgtacggtcaaaattcacgaaggtc 15786002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 18509164 - 18509068
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacat 282  Q
    |||||||||| ||||||  |||||| |||||||||||||| |||||  ||| |  |||||||| ||||||||||||| ||| ||||||| ||||||||    
T  18509164 taatttgagcgaatttcgatttacctcctgccatatcatcaatttttcacaataaaaattcattaaggtctaaaacg-aaataatcttctaattacat 18509068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 31226380 - 31226474
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||| || |||||| | |||||| |||   | ||||||||||||||| |||||   ||||||||||||||||||    
T  31226380 taatttgagcaaatttcggtttaccccatgtcatatctttgattttgtacgaccaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 31226474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 32681897 - 32681977
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||| |||||||| ||||||||| ||| ||||| |||||||| ||| ||| |||||||||||||| |||||| |||||    
T  32681897 taatttgaacaaatttcggtttacccc-tgctatatcttcgattttgtactgtcaaaattcatgaaggtttaaaaccaaaaa 32681977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 281
Target Start/End: Original strand, 29172646 - 29172788
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||| |||||||||| || ||||||||| ||||| ||   ||  |||||||||||| |||||  ||||||||||| |||||||||| ||||| |||||    
T  29172646 gaccttaatggcatcaagtttcaaaatttaaggtacgttcgtcca-tgtaatttgagcgaattttggtttacccccttccatatcatctattttgtacag 29172744  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
     | ||| ||| ||||||  |||||  ||| |||||||||||||||    
T  29172745 ccaaaagtcacgaaggttcaaaac-caaagaatcttcaaattaca 29172788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 8678934 - 8678989
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttga 192  Q
    |||||||||||||||||||||||||||||| ||||||||  || | ||||||||||    
T  8678934 gaccttcatggcatcaaattacaaaatttaaggtactttcgcctcttgtaatttga 8678989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 5114298 - 5114260
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  5114298 ttttaccccctgtaatttgagcaaatttcggtttacccc 5114260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 14574851 - 14574766
Alignment:
Q  182 ctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||||||  ||||| ||||||| |||||| |||||||| ||||||  ||||| | ||||||| ||||| |||||    
T  14574851 ctgtaatttgagcaaatttaggtttacccccctgtcatatcttcgattttgtacagtaaaaattaacgaaggtccaaaaccaaaaa 14574766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 3652523 - 3652483
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  3652523 ttttaccccctgtaatttgagcaaatttaggtttaccccct 3652483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 5283758 - 5283685
Alignment:
Q  204 tttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||| || |||||||||||||||| || |||| ||||||||||||||  |||||   ||||||||||||||||    
T  5283758 tttaccctctaccatatcatcgattttgtagagtcaaaattcatgaaggttcaaaac--caaaaatcttcaaatta 5283685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 15786110 - 15786074
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15786110 accccctgtaatttgagcaaatttcggtttaccccct 15786074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 32682327 - 32682367
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  32682327 tttaccccctgtaatttgagcaaattttggtttaccccctg 32682367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 277
Target Start/End: Original strand, 40920757 - 40920884
Alignment:
Q  149 atcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatg 248  Q
    |||||||| ||||||||| |||  |||||||| || ||||||||||||||||  ||||||| | |||||  |||| | ||||   ||||| ||||| |||    
T  40920757 atcaaatttcaaaatttaaggtgattttacccactataatttgagcaaattttggtttacctcatgccaagtcattggttttgcccagtcaaaatttatg 40920856  T
Q  249 aaggtctaaaacgaaaaaaatcttcaaat 277  Q
    ||| || |||| | |||||||||||||||    
T  40920857 aagatccaaaa-gtaaaaaatcttcaaat 40920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 8810043 - 8809963
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||| |||||||||| |||||||| |||||| |||| |  ||||||||||||||  |||||   ||||||||||||||||    
T  8810043 atttcaggttaccccctgtcatatcattgattttgtacaattaaaattcatgaaggttcaaaac--taaaaatcttcaaatta 8809963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 14121371 - 14121409
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  14121371 ttttgccccctgtaatttgaggaaatttcagtttacccc 14121409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 25244511 - 25244474
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25244511 ttcatgaaggtctaaaac-aaaaaaatcttcaaattaca 25244474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 39152134 - 39152039
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||||   |||||| |||| | |||||||||||||| ||| ||| |||||||||||| |  |||||  |||||||||||||||||||    
T  39152134 taatttgtgcaaatttagatttaccaccctactatatcatcgattttgtacggtcaaaattcatgaagattcaaaac--aaaaaatcttcaaattaca 39152039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 50719805 - 50719771
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||| ||||||||||||||||||||||||||||||    
T  50719805 ccccttgtaatttgagcaaatttcagtttaccccc 50719771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 13555848 - 13555901
Alignment:
Q  213 tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||||| |||||||  |||||||||||| | ||||| |||||    
T  13555848 tgccatatcatcgattttgtacagtcataattcatgaaggaccaaaaccaaaaa 13555901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 25786363 - 25786326
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttt 175  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  25786363 accttcatggcatcaaattacaaattttaaggtacttt 25786326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 42161380 - 42161298
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||| ||| ||||||||| ||||| |||   | ||||||||||||||| ||||    ||||||||||||||||||    
T  42161380 atttcagtttaccctctgtcatatcatcaattttgtacctacaaaattcatgaaggtcaaaaa--tcaaaaatcttcaaattaca 42161298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 49296157 - 49296198
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  49296157 tttacccccttgtaatttgagaaaatttcagtttaccccctg 49296198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 5114236 - 5114188
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatc 221  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||    
T  5114236 tttaccccctgttaatttgagcaaattttggtttaccccctaccatatc 5114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 13437073 - 13436932
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| ||||||||||||||||||| ||||||||  |||| |||||||||||  |||||  ||||| |||||| ||||||||||||||| ||||     
T  13437073 gaccttcatgacatcaaattacaaaatttaaggtactttcgccccttgtaatttgagagaattttggttta-cccctgtcatatcatcgattttgtacaa 13436975  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || |||||||||||||||||||||  |||||||||||||||||||    
T  13436974 tcaaaattcatgaaggtctaaaac--aaaaaatcttcaaattaca 13436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 22151997 - 22152126
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| ||||||||| |||||||||||||||||   ||| ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||    
T  22151997 gaccttcatgacatcaaattgcaaaatttatggtacttacgcccactgtaatttaagcaaatttcagtttaccctctaccatatcatcgattttgtacag 22152096  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    || |||||||| |||||  ||||| |||||    
T  22152097 tcaaaattcataaaggtgcaaaactaaaaa 22152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 481
Target Start/End: Complemental strand, 17877927 - 17877801
Alignment:
Q  355 ttaaaactatttaagtctttttataaaggggaggtggtgctttccaggtttttatggctgagagttgttggtcgacagttacagatggtggaatccataa 454  Q
    |||||||||||||| ||||||| ||||| |||||||||| || |  ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  17877927 ttaaaactatttaaatctttttttaaagtggaggtggtggttgcttggtttttatagctgagagttgttggtcgacaattacaaatggtggaatccataa 17877828  T
Q  455 aagctgaccattgcttaatggtgatga 481  Q
    |||  || |||| |||||| |||||||    
T  17877827 aagtcgagcattacttaatcgtgatga 17877801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 5932138 - 5932044
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  5932138 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcgaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 5932044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 26190907 - 26190813
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  26190907 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 26190813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 44228499 - 44228357
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    ||||||| |||||||||||| ||||||||| ||||||||  |||| |||||||| |||||||||| |||||||||||| ||||||||| |||||   |||    
T  44228499 gaccttcgtggcatcaaatttcaaaatttaaggtactttcgcccc-tgtaatttaagcaaatttcggtttaccccctggcatatcatcaattttgcccag 44228401  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || ||||||||||||||| |||||  ||| |||||| ||||||||    
T  44228400 tcaaaattcatgaaggtccaaaac-caaagaatctttaaattaca 44228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 14909957 - 14910051
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||  ||||||  ||||||||||||    
T  14909957 taatttgagaaaatttcagtttaccccctgccatatcatcgattttgtacagttaaaattcatgaaggtccaaaagcaaaaaa--cttcaaattaca 14910051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 509
Target Start/End: Complemental strand, 20145365 - 20145217
Alignment:
Q  356 taaaactatttaagtctttttataaaggggaggtggtgctttccaggtttttatggctgagagttgttggtcgacagttacagatggtggaatccataaa 455  Q
    ||||||||||||| ||||||| ||||| |||||||||| ||   |||||||||| |||||||||  || ||||||||||| |||||||||||||||||||    
T  20145365 taaaactatttaaatctttttttaaagaggaggtggtggttgttaggtttttatagctgagagt--ttagtcgacagttagagatggtggaatccataaa 20145268  T
Q  456 agctgaccattgcttaatggtgatgatagaagcagttataattaagtgttttaa 509  Q
       ||  |||| ||||||||||||||  |||||||||| | || ||||||||||    
T  20145267 ---tgggcattacttaatggtgatgactgaagcagttaaagttcagtgttttaa 20145217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 5457269 - 5457176
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||| |||| || ||||||||||||||| ||||| |||||    
T  5457269 tttaccccctgttaattttagcaaatttcagtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaa 5457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 33864277 - 33864133
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc-ctgccatatcatcgattttataca 235  Q
    |||||| ||||||||||||||||||||||| |||| |||  || ||||||||||  |  |||||| ||||||||| |||| |||||||||||||| ||||    
T  33864277 gacctttatggcatcaaattacaaaatttaaggtattttcgcctcctgtaattttcgagaatttcggtttacccctctgcgatatcatcgattttgtaca 33864178  T
Q  236 gtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||| |||||||||||| |  |||||  ||| |||||||||||||||    
T  33864177 gtcaaaattcatgaagattcaaaac-caaagaatcttcaaattaca 33864133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 281
Target Start/End: Original strand, 33916645 - 33916789
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc-ctgccatatcatcgattttataca 235  Q
    |||||| ||||||||||||||||||||||| |||| |||  || ||||||||||  |  |||||| ||||||||| |||| |||||||||||||| ||||    
T  33916645 gacctttatggcatcaaattacaaaatttaaggtattttcgcctcctgtaattttcgagaatttcggtttacccctctgcgatatcatcgattttgtaca 33916744  T
Q  236 gtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||| |||||||||||| |  |||||  ||| |||||||||||||||    
T  33916745 gtcaaaattcatgaagattcaaaac-caaagaatcttcaaattaca 33916789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 47231305 - 47231199
Alignment:
Q  174 tttaccccctgtaa-tttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||||||||||| ||||| ||||||  |||    
T  47231305 tttaccccctgttagtttgagaaaatttcggtttaccccctgccatattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaa--ctt 47231208  T
Q  273 caaattaca 281  Q
    |||||||||    
T  47231207 caaattaca 47231199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 9240691 - 9240549
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    ||||||||||||||||||||  ||||||| ||||||||      ||||||||||||  ||||||||||||||| ||  |||||||| |||||||||||||    
T  9240691 accttcatggcatcaaattatgaaatttaaggtactttcgtattctgtaatttgagagaatttcagtttaccctctttcatatcattgattttatacagt 9240592  T
Q  238 cgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    | |||||||| |||||| ||||   ||| |||||||||||||||    
T  9240591 caaaattcataaaggtccaaaa-tcaaagaatcttcaaattaca 9240549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 21770931 - 21770837
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||| ||||||| |||||||||||||   |||||   ||||||||||||||||||    
T  21770931 taatttgagcaaatttcggtttaccctctgccatatcttcgattttgtacagtcaaaattcatgaaggcacaaaac--caaaaatcttcaaattaca 21770837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 27666093 - 27665999
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||| ||| ||  ||||||||||||||| |||||   ||||||||||||||||||    
T  27666093 taatttgagcaaatttcggtttaccccatgccatatcttcgattttctactgtaaaaattcatgaaggtcgaaaac--caaaaatcttcaaattaca 27665999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 44078739 - 44078638
Alignment:
Q  152 aaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaag 251  Q
    ||||| ||||||||| ||||||||| |||||| ||  ||||||||||||  || |||||||||  ||||||||||||||||||| || ||||||||||||    
T  44078739 aaatttcaaaatttaaggtacttttgccccctatagattgagcaaattttggtataccccctgtaatatcatcgattttatacaatcaaaattcatgaag 44078640  T
Q  252 gt 253  Q
    ||    
T  44078639 gt 44078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 9209764 - 9209670
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||| |||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  9209764 tttaccccctgttaattttagcaaatttcggtttacccccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 9209670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 41190013 - 41189919
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| || ||||||| ||||||||||| |||||||||||||||| ||| ||| |||| ||||||||||||||||   | ||||||||||||||||    
T  41190013 taattttagaaaatttcggtttaccccctaccatatcatcgattttgtaccgtcaaaatccatgaaggtctaaaac--cataaatcttcaaattaca 41189919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 44961182 - 44961088
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| |||||||| || ||||||| |||||||| ||||||| |||| |||||||||| ||||   |||||||||||||||||||    
T  44961182 taatttcagcaaatttcggtttaccctctaccatatcttcgattttgtacagtcaaaatccatgaaggtccaaaat--aaaaaatcttcaaattaca 44961088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 26399041 - 26399136
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccc--tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||| ||||| || ||||| ||||||| ||||||||||||||| ||||| |||||    
T  26399041 tttaccccctgttaatttgagcaaatttcggtttaccccccatgctatatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 26399136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 5469548 - 5469473
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||||||||||| ||||||||||| |||| |||| ||||||||||| ||||  |||||| ||||||||||    
T  5469548 gaccttcatggcatcaaactacaaaatttaaggtatttttgccccctgtaatatgagagaatttcggtttaccccc 5469473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 16639595 - 16639698
Alignment:
Q  150 tcaaattacaaaatttatggtacttttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatg 248  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| ||||||  |||||||||||  ||||| || |||||| ||||||| |||| ||||    
T  16639595 tcaaattacaaaatttatggtactttcgcccctttgtaatttgagaaaattttggtttaccccctatcatattattgattttgtacagtcaaaatccatg 16639694  T
Q  249 aagg 252  Q
    ||||    
T  16639695 aagg 16639698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 25059909 - 25059999
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||| | ||||||||||||||||||| |||| |||  |||| |||||||||||   ||||| |||||||||||| ||||||||||||    
T  25059909 gaccttcaagacatcaaattacaaaatttaaggtattttcgccccttgtaatttgagagcatttcggtttaccccctgtcatatcatcgat 25059999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 20158837 - 20158929
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| |||||||||||||||  ||||||||| ||| ||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  20158837 tttaccccctgttaatttgagcaaattttggtttacccc-tgctatatcttcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaa 20158929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 21853728 - 21853809
Alignment:
Q  187 atttgagcaaatttcagtttaccccct-gccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||| || |||| |||||||||||| || ||||| ||||||    
T  21853728 atttgagaaaatttcggtttacccccttgccatatcatcgattttgtatagtcaaaattcatgaagatccaaaaccaaaaaa 21853809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 22387374 - 22387455
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| ||||||   |||||||||||||||||| |||||||| ||||||| |||||| |||||||| ||||| |||||    
T  22387374 taatttgagaaaattttgttttaccccctgccatatcttcgattttgtacagtcaaaattcttgaaggtccaaaaccaaaaa 22387455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 23162001 - 23161908
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||| ||| ||| ||||||||||||||| ||||    ||||||||||||||||||    
T  23162001 taatttgagcaaattttggtttacccc-tgccatatcttcgattttgtaccgtcaaaattcatgaaggtccaaaa--tcaaaaatcttcaaattaca 23161908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 25060000 - 25060082
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||||||||||||||||| |||||| |||| || ||||||||||||||  |||||   ||||||||||||||||||    
T  25060000 atttcaggttaccccctgccatatcattgattttgtacaatcaaaattcatgaaggttcaaaac--taaaaatcttcaaattaca 25060082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 31883649 - 31883557
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaa 265  Q
    |||||||||||| |||||||  ||||||   |||||||||||||||||| |||||||| ||||||| |||||||||| |||| ||||| ||||    
T  31883649 tttaccccctgttaatttgattaaattttgatttaccccctgccatatcttcgattttgtacagtcaaaattcatgatggtccaaaaccaaaa 31883557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 16421099 - 16420995
Alignment:
Q  177 accccctgt-aatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttca 274  Q
    ||||||||| |||||||||||||||  ||||| |||||||||||||| |||||||| ||| ||| |||||||| |||||| |||||   | |||||||||    
T  16421099 accccctgttaatttgagcaaattttggtttagccccctgccatatcgtcgattttgtactgtcaaaattcataaaggtccaaaac--tagaaatcttca 16421002  T
Q  275 aattaca 281  Q
    |||||||    
T  16421001 aattaca 16420995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 47979963 - 47980057
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| ||||||| |||| |||||  |||||||| ||| ||| ||||| |||||| | ||||||  |||||||||||||||||||    
T  47979963 taattttagcaaatttcggtttaccacctgtcatattttcgattttgtacggtcaaaatttatgaagatttaaaac--aaaaaatcttcaaattaca 47980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 6284364 - 6284451
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||||| |||||||||||||||| ||||||  | |||| ||||| |||||||| | ||||| ||||||||||||||| ||||    
T  6284364 tttaccccctgttaatttgagcaaatttcggtttacaactctgctatatcttcgattttgtgcagtcaaaattcatgaaggtccaaaa 6284451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 16474493 - 16474431
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttataca 235  Q
    |||||||||||| |||||||| |||  || |||||||||||||||||||||||||||| ||||    
T  16474493 tttaccccctgttaatttgagaaaaaatcggtttaccccctgccatatcatcgattttgtaca 16474431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30147243 - 30147148
Alignment:
Q  185 taatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||| || ||||||||||| |||||||| ||| ||| |||||||| |||||| |||||   | ||||||||||||||||    
T  30147243 taatttgagcaaattttggtttagcctcctgccatatcgtcgattttgtactgtcaaaattcataaaggtccaaaac--cataaatcttcaaattaca 30147148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 47641883 - 47641978
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| | ||||||| ||||||| |||| ||||||||| ||| || ||| ||| ||||||||||||||| |||||  |||||| ||||||||||||    
T  47641883 taatttgtgaaaatttcggtttacctccctaccatatcattgatgttgtactgtcaaaattcatgaaggtccaaaac--aaaaaaacttcaaattaca 47641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 7261543 - 7261486
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagc 194  Q
    |||||||||| ||||||||| ||||||| | ||||||||  |||||||||||||||||    
T  7261543 gaccttcatgacatcaaatttcaaaattgaaggtactttgcccccctgtaatttgagc 7261486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 15336679 - 15336767
Alignment:
Q  174 tttaccccctgtaa-tttgagcaaatttcagttta--ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||||| | |||||||||||||  |||||  |||||||||||||| |||||||| ||| ||| |||||||| |||||| ||||    
T  15336679 tttaccccctgttagtttgagcaaattttggtttagcccccctgccatatcgtcgattttgtactgtcaaaattcataaaggtccaaaa 15336767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 22315288 - 22315329
Alignment:
Q  186 aatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  22315288 aatttgagaaaatttcagtttacccccttccatatcatcgat 22315329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 46528958 - 46529039
Alignment:
Q  185 taatttgagcaaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaa 265  Q
    |||||| ||||||||||  |||||| |||||||||||| ||||| || ||||| | ||||||||||||||| ||||| ||||    
T  46528958 taatttaagcaaatttcgatttacctccctgccatatcttcgatattgtacagccaaaattcatgaaggtccaaaaccaaaa 46529039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 50345090 - 50345131
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcga 226  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  50345090 taatttgagcaaatttcagtttaccctctgtcatatcatcga 50345131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 20186430 - 20186486
Alignment:
Q  386 aggtggtgctttccaggtttttatggctgagagttgttggtcgacagttacagatgg 442  Q
    ||||||||||||||| |||| ||||||| ||||||||||||  | ||||||||||||    
T  20186430 aggtggtgctttccaagtttatatggctaagagttgttggttaatagttacagatgg 20186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 26190982 - 26190942
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  26190982 ttttaccccctgtaatttgagcaaatttaggtttaccccct 26190942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 49590640 - 49590540
Alignment:
Q  152 aaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaag 251  Q
    ||||||||||| || ||||| ||||  ||| ||||||||||| |||||||  ||||||  || || ||||||||||||| |||  || ||||||||||||    
T  49590640 aaattacaaaaattgtggtatttttttcccatgtaatttgagtaaatttcgatttaccatcttccttatcatcgattttgtactatcaaaattcatgaag 49590541  T
Q  252 g 252  Q
    |    
T  49590540 g 49590540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 22315341 - 22315392
Alignment:
Q  209 cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||||| |||||||| |||||| || |||||||||| |||||||||||||||    
T  22315341 cccctgtcatatcattgattttttatagtcgaaattgatgaaggtctaaaac 22315392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 23162044 - 23162006
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttacccc 211  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23162044 tttacccccttgtaatttgagcaaatttcagtttacccc 23162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 15336607 - 15336571
Alignment:
Q  245 catgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  15336607 catgaaggtccaaaacaaaaaaaatcttcaaattaca 15336571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 15336653 - 15336689
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  15336653 ccccctgtgatttgagcaaatttcggtttaccccctg 15336689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 21881369 - 21881297
Alignment:
Q  195 aaatttcagtttacc-ccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||| ||||||| |||| ||||||||| |||||| ||| ||| || |||||||||||| ||||| |||||    
T  21881369 aaatttcggtttacctccctaccatatcattgattttgtactgtcaaagttcatgaaggtccaaaaccaaaaa 21881297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 44961222 - 44961186
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  44961222 accccatgtaatttgagcaaatttcggtttaccccct 44961186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 46528887 - 46528923
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  46528887 accccctgtaatttgagcaaatttaggtttaccccct 46528923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 47231335 - 47231295
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||||||||| |||||||| ||||||| ||||||||||||    
T  47231335 tttaccccctgcaatttgagaaaatttcggtttaccccctg 47231295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 7308264 - 7308137
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||  |||||| ||||||||||||||||||||| |||||| ||| |    
T  7308264 gaccttcatggcatcaaattacaaaatttaaggtactttcgcccc-tgtaatttgagagaatttcggtttaccccctgccatatcattgattttgtactg 7308166  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaa 265  Q
    || ||||||||||||||| ||||| ||||    
T  7308165 tcaaaattcatgaaggtccaaaaccaaaa 7308137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 30226325 - 30226182
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    |||||||||| || ||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||| ||||||||| ||||| ||| |    
T  30226325 gaccttcatgacaacaaattacaaaatttatggtactttcaccccttgtagtttgagcaaattttagtttaccccctgtcatatcatcaattttgtaccg 30226226  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || |||||||| ||| || |||||  ||| |||||||||||||||    
T  30226225 tcaaaattcataaagatccaaaac-caaataatcttcaaattaca 30226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 7272748 - 7272642
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||| ||||||  |||    
T  7272748 ttttgccccctgtaatttgaggaaatttcagtttaccccctgccatatcatcgattttgtacagtcacaattcatgaagatctaaaaccaaaaaa--ctt 7272651  T
Q  273 caaattaca 281  Q
    |||||||||    
T  7272650 caaattaca 7272642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 2985685 - 2985790
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttc 273  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||  ||||    
T  2985685 tttaccccctgcaatttgagcaaatttcggtttatcctctgccatatcatcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaaa--cttc 2985782  T
Q  274 aaattaca 281  Q
    ||||||||    
T  2985783 aaattaca 2985790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 7226259 - 7226151
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||| || ||||||||||||||| ||||| ||||||| |||    
T  7226259 tttaccccctgcaatttgagcaaatttcggtttacccccctgccatatcatcgattttgtacattcaaaattcatgaaggtccaaaaccaaaaaaaactt 7226160  T
Q  273 caaattaca 281  Q
    |||||||||    
T  7226159 caaattaca 7226151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 13049639 - 13049733
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  13049639 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 13049733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 52839498 - 52839592
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  52839498 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 52839592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 43426461 - 43426370
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgat 227  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||  |||||| ||||| ||||||||||||||||||||    
T  43426461 gaccttcatagcatcaaattacaaaatttaaggtacttttgccccctgtaatttgagagaatttcggtttacccccctgccatatcatcgat 43426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 25124876 - 25124966
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||||||||||||||||||| |||||||| ||||||||  |||| ||||||||| |  ||||||||||||||||||||||||||||||||    
T  25124876 gaccttcatggcatcaaattataaaatttaaggtactttcgccccttgtaatttgggagaatttcagtttaccccctgccatatcatcgat 25124966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 37050220 - 37050096
Alignment:
Q  153 aattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaagg 252  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||  ||||||  || |||| |||||||||||||  |||| |||||||||||||    
T  37050220 aattacaaaatttaaggtactttcgccccttgtaatttgagcaaatttcgatttaccttctaccatgtcatcgattttat--agtcaaaattcatgaagg 37050123  T
Q  253 tctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||   |||||||||||||||||||    
T  37050122 tctaaaa--taaaaaatcttcaaattaca 37050096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 13041562 - 13041656
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  13041562 taatttgagcaaatttcggttttccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 13041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 28735631 - 28735521
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| |||||| ||||| |||||| |||||||| ||||| | ||||||||||||||| |||||   |||||||||    
T  28735631 tttaccccctgtgaatttgagcaaatttcggtttactccctgtcatatcttcgattttgtacagccaaaattcatgaaggtccaaaac--caaaaatctt 28735534  T
Q  273 caaattacatgga 285  Q
    |||||||||||||    
T  28735533 caaattacatgga 28735521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 31293651 - 31293745
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  31293651 taatttgagaaaatttcggtttaccccctcccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 31293745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 13439761 - 13439857
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||| |||| || ||||||||||||||| |||||   ||||||||||||||||||    
T  13439761 tgtaatttgagcaaatttcaatttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 13439857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 5572152 - 5572246
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||    ||||||||||||||||||    
T  5572152 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaa--tcaaaaatcttcaaattaca 5572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 14220555 - 14220648
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| ||||| |||||    
T  14220555 tttaccccctgttaattttagcaaatttcagtttaccccctgctatatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaaaa 14220648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 14224782 - 14224875
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| ||||| |||||    
T  14224782 tttaccccctgttaattttagcaaatttcagtttaccccctgctatatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaaaa 14224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 19111128 - 19111233
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| ||||| ||| || |||||| |||||||||||||||| ||||||||||||||| |||||   |||||||||    
T  19111128 tttaccccctgttaatttgagcaaatttcggtttatccc-tgtcatatcttcgattttatacagtcaaaattcatgaaggtccaaaac--caaaaatctt 19111224  T
Q  273 caaattaca 281  Q
    |||||||||    
T  19111225 caaattaca 19111233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 32721706 - 32721800
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||||||||| |||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  32721706 taatttgagcaaatttcgatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatcttcaagttaca 32721800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 25124967 - 25125047
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||    
T  25124967 atttcagtttacccccttccatatcatcgattttgtacagtcaaaattcatgaaggtcaaaaac--caaaaatcttcaaatta 25125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 55257748 - 55257839
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttac-cccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| | ||||||||   ||||||||||||| |||||||||||||||||||    
T  55257748 gaccttcatggcatcaaattacaaaatttaaggtactttcgccccttataatttgatagaatttcagtttacacccctgccatatcatcgat 55257839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 17030783 - 17030694
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||  |||||  ||||||| |||||||||||||||||    
T  17030783 gaccttcatggcatcaaattacaaaatttaaggtactttca-cccctgtaaattgagagaattttggtttacctcctgccatatcatcgat 17030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 22818058 - 22817964
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||| ||||||||||| |||||||| || |||| ||||||||||||||| |||||   ||||||||||||||||||    
T  22818058 taatttgagcaaattttggtttacctcctgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 22817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 23070103 - 23070224
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagt 237  Q
    |||||| || |||||||||| |||||||| ||||||||  |||| | |||||||||  ||||||  |||||||| | ||| ||| |||||||||||||||    
T  23070103 accttcgtgacatcaaattataaaatttaaggtactttcgccccttctaatttgagagaatttcgatttacccctttccacatcgtcgattttatacagt 23070202  T
Q  238 cgaaattcatgaaggtctaaaa 259  Q
    | ||||||||||||||| ||||    
T  23070203 caaaattcatgaaggtccaaaa 23070224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 7013277 - 7013416
Alignment:
Q  141 ttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcga 240  Q
    ||||||| |||||||||||||||||| | ||||||  |||| |||||||||||  |||||   ||||||||||||||| |||||||||||  ||| || |    
T  7013277 ttcatggtatcaaattacaaaatttaagatactttcgccccatgtaatttgagagaatttagatttaccccctgccatgtcatcgattttgcacaatcaa 7013376  T
Q  241 aattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||| |||||| || |||||  ||| |||||||||||||||    
T  7013377 aatttatgaagatccaaaac-caaagaatcttcaaattaca 7013416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 17582567 - 17582477
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||||||| |||||||||||||||||||| ||||||||  |||| |||||||||||  | |||| ||||||| |||||||||| ||||||    
T  17582567 gaccttcatagcatcaaattacaaaatttaaggtactttcgccccttgtaatttgagagattttcggtttacctcctgccatataatcgat 17582477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 18359345 - 18359463
Alignment:
Q  143 catggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatc----atcgattttatacagtc 238  Q
    |||||||||||||||||||||||| ||||||||   || ||||||||||||  |||||| | ||| |||||| ||||||    ||||||||| |||||||    
T  18359345 catggcatcaaattacaaaatttaaggtactttagtccgctgtaatttgagagaatttcggatta-cccctgtcatatcatcgatcgattttttacagtc 18359443  T
Q  239 gaaattcatgaaggtctaaa 258  Q
     |||||||||||||||||||    
T  18359444 aaaattcatgaaggtctaaa 18359463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 45151796 - 45151718
Alignment:
Q  189 ttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||| | ||||| ||||||    
T  45151796 ttgagaaaatttcggtttaccccctgccatatcatcgattttgtacagttaaaattcatgaaggaccaaaaccaaaaaa 45151718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 34314847 - 34314778
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtc 254  Q
    |||||||||||||||||   |||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  34314847 taatttgagcaaatttcgacttactccctgccatatcatcgattttgtacagtcaaaattcatgaaggtc 34314778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 22438727 - 22438794
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc 211  Q
    |||||||||||||||||||||||| |||||||  |||||| ||||||||| |||||||||||| ||||    
T  22438727 atggcatcaaattacaaaatttattgtactttcgccccctataatttgagtaaatttcagtttgcccc 22438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 31073854 - 31073950
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||||   ||||||||| |||||||| || ||||| |||| || ||||||||||||||| |||||   ||||||||||||||||||    
T  31073854 tgtaatttgagcaaattttgctttaccccccgccatatcttcaattttgtacattcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 31073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 54571292 - 54571374
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||| | ||||||| ||||| ||||||||  ||||| ||||||    
T  54571292 taatttgagaaaatttccgtttaccccctgctatatcatcgattctgtacagtcaaaatttatgaaggttcaaaacaaaaaaa 54571374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 14870130 - 14870223
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||   |||||||  ||||||||| |||||||| ||||||| |||||||| |||||| ||||||  ||||||||||||||||||    
T  14870130 taatttgagcaaattttgctttaccct-tgccatatcttcgattttgtacagtcaaaattcataaaggtccaaaacg--aaaaatcttcaaattaca 14870223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 17030693 - 17030611
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||| ||||| |||| |||||||| |||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  17030693 atttcaggttaccacctgacatatcattgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 17030611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 38703183 - 38703264
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||| |||||||  ||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||| ||||| |||||    
T  38703183 taatttgaacaaattttggtttaccccctgccatatcttcgattttgtacggtcaaaattcacgaaggtccaaaaccaaaaa 38703264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 52962409 - 52962325
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    |||||||| | |||||||  |||||||||||  |||||| |||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  52962409 tgtaatttcaacaaatttaggtttaccccctatcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa 52962325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 25158953 - 25158890
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| |||||    
T  25158953 attttagtttaccccttgccatatcatcgattttgtacagtcaaaattcatgaatgtccaaaac 25158890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 25159081 - 25158965
Alignment:
Q  141 ttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagttt----accccctgccatatcatcgattttatacag 236  Q
    |||||||||||||||||||||||||| |||| |||  || |||||||||||||  |||||  ||||    |||||| | ||||| ||| ||||| |||||    
T  25159081 ttcatggcatcaaattacaaaatttaaggtattttcgcctcctgtaatttgagagaattttggtttaaccacccccggtcatattatcaattttgtacag 25158982  T
Q  237 tcgaaattcatgaaggt 253  Q
    || ||||||||||||||    
T  25158981 tcaaaattcatgaaggt 25158965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 39218832 - 39218926
Alignment:
Q  185 taatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| |||||||  ||||| ||||| |||||||||||||||||||| ||| ||||| ||||||||| |||||    |||||||||||||||||    
T  39218832 taatttgagaaaatttcgatttactcccctcccatatcatcgattttatacggtcaaaatttatgaaggtccaaaac---taaaatcttcaaattaca 39218926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 300344 - 300263
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||  |||||||||||   ||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  300344 taatttgagcaaattttggtttaccccctatgatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 300263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 7670664 - 7670570
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||  ||||| |||||| |||||||| | ||||| |||||||| |||||| |||||   ||| ||||||||||||||    
T  7670664 taatttgagcaaatttcggtttattccctgtcatatcttcgattttgttcagtcaaaattcattaaggtccaaaac--caaatatcttcaaattaca 7670570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 14004463 - 14004528
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaa 250  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||| ||| ||| |||||||||||    
T  14004463 taatatgagcaaatttcggtttaccccctgctatatcttcgattttgtactgtcaaaattcatgaa 14004528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 22447005 - 22447108
Alignment:
Q  179 cccctgtaatttgagca---aatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaa 275  Q
    ||||||||||||||| |   |||||| ||||||||| |||||||| ||||||||| ||||||| || |||||| | ||| ||||| ||||  ||||||||    
T  22447005 cccctgtaatttgagaagaaaatttcggtttaccccatgccatataatcgattttgtacagtcaaagttcatgtatgtcgaaaactaaaa--atcttcaa 22447102  T
Q  276 attaca 281  Q
    ||||||    
T  22447103 attaca 22447108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 260
Target Start/End: Original strand, 1452080 - 1452187
Alignment:
Q  153 aattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaagg 252  Q
    |||| ||||||||| |||  ||| ||||| |||||||||||| |||||   |||||||| ||  |||||||||||||| ||  ||  |||||||||||||    
T  1452080 aatttcaaaatttaaggtgttttcaccccttgtaatttgagcgaattttgatttaccccatgtgatatcatcgattttgtaatgtaaaaattcatgaagg 1452179  T
Q  253 tctaaaac 260  Q
    ||||||||    
T  1452180 tctaaaac 1452187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 45008123 - 45008056
Alignment:
Q  145 tggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||||||||||||||| || |||||  |||| ||||||||||  ||||||| ||||||||||    
T  45008123 tggcatcaaattacaaaatttaaggaactttcgccccttgtaatttgataaaatttcggtttaccccc 45008056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 26770106 - 26770213
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| ||||||||  |||||| ||||| || |||| |||||| |||||||| ||| ||| ||||||||||||||| |||||   | ||||||    
T  26770106 tttaccccctgttaatttgagtgaatttcggtttagccacctgacatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--cagaaatct 26770203  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  26770204 tcaaattaca 26770213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 3505199 - 3505280
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| ||||||| |||||| |||||||||||  |||||||| ||| | | |||||||| |||||| ||||| |||||    
T  3505199 taatttgagtaaatttcggtttactccctgccatattctcgattttgtacggacaaaattcataaaggtccaaaaccaaaaa 3505280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 48689293 - 48689200
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||| ||||||||||||| ||||  ||||||| |||||||||| |||||||| ||| ||  ||||| |||| |||| ||||| |||||    
T  48689293 tttacccccttgtaatttgagcaagtttcgatttaccctctgccatatcttcgattttgtacggttaaaatttatgacggtccaaaaccaaaaa 48689200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 28298187 - 28298250
Alignment:
Q  217 atatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||  ||| |||| ||||||||||    
T  28298187 atatcatcgattttgtacagtcaaaattcatgaagatctaaaac-taaataatcatcaaattaca 28298250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 52839422 - 52839462
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  52839422 ttttaccccctgtaatttgagcaaatttaggtttaccccct 52839462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 7226290 - 7226248
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgc 215  Q
    |||| |||||||||||||||| ||||||| |||||||||||||    
T  7226290 ttttgccccctgtaatttgaggaaatttcggtttaccccctgc 7226248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 7226294 - 7226331
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7226294 ttcatgaaggtctaaaac-aaaaaaatcttcaaattaca 7226331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 30451513 - 30451479
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttacccc 211  Q
    |||||||||||||||||||||||| ||||||||||    
T  30451513 accccctgtaatttgagcaaatttaagtttacccc 30451479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 39218770 - 39218733
Alignment:
Q  243 ttcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39218770 ttcatgaaggtctaaaac-aaaaaaatcttcaaattaca 39218733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 45151872 - 45151830
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgc 215  Q
    |||| |||||||||||||||| ||||||| |||||||||||||    
T  45151872 ttttgccccctgtaatttgaggaaatttcggtttaccccctgc 45151830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 5303651 - 5303594
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||||||| ||||||||||||| ||||| ||||||  ||| ||||||||||| |||||    
T  5303651 gtttaccctctgccatatcatcaattttgtacagtgaaaaatcatgaaggtccaaaac 5303594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 22438810 - 22438892
Alignment:
Q  195 aaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||| ||||||| | |||||||| ||||||||| ||||||| || |||||| | ||| ||||| ||||  ||||||||||||    
T  22438810 aaatttcggtttacctcatgccatataatcgattttgtacagtcaaagttcatgtatgtccaaaactaaaa--atcttcaaatta 22438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 41423129 - 41423193
Alignment:
Q  216 catatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||| ||||||| || ||||||||||||||||| | ||| |||||| ||||||||    
T  41423129 catatcatctattttgtacagtcaaatttcatgaaggtctaaaa-gcaaataatctttaaattaca 41423193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 45008027 - 45007958
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||| ||||||||||||| ||| | |||||| ||| ||| ||||||||||||||  ||||| |||||    
T  45008027 atttcaggttaccccctgccaaatcgttgattttgtacggtcaaaattcatgaaggttcaaaactaaaaa 45007958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 14870059 - 14870095
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||  |||||||||||    
T  14870059 accccctgtaatttgagcaaatttaggtttaccccct 14870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 19111102 - 19111138
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  19111102 ccccttgtaatttgagaaaatttcagtttaccccctg 19111138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 22818134 - 22818094
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||| ||||||||||||||||||||||  |||||||||||    
T  22818134 ttttatcccctgtaatttgagcaaatttaggtttaccccct 22818094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 36727759 - 36727795
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  36727759 ccccctgtaatttgagcaaatttcggttcaccccctg 36727795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 36727788 - 36727870
Alignment:
Q  177 accccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    ||||||||| |||||||||||||||  ||||| |||||| |||||||| |||||| |||| || |||||||| |||||| |||||    
T  36727788 accccctgttaatttgagcaaattttggttta-cccctg-catatcattgattttgtacaatcaaaattcataaaggtccaaaac 36727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 7e-29; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 13153643 - 13153772
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    ||||||||| |||||||| ||||||||||| ||||||||   ||| |||||||||||  |||||| |||||||||||||||||| || |||||| |||||    
T  13153643 gaccttcatagcatcaaaatacaaaatttacggtactttcgtcccttgtaatttgagagaatttcggtttaccccctgccatataattgattttgtacag 13153742  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    || ||||||||||||||| ||||| |||||    
T  13153743 tcaaaattcatgaaggtccaaaaccaaaaa 13153772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 41123343 - 41123437
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  41123343 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcgaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 41123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 31312645 - 31312746
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaat 277  Q
    |||| ||||||||||||||||||| |||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||||   ||||||||||||||    
T  31312645 ccccttgtaatttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtctaaaac--caaaaatcttcaaat 31312742  T
Q  278 taca 281  Q
    ||||    
T  31312743 taca 31312746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 11721442 - 11721348
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  11721442 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 11721348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 31567856 - 31567715
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    ||||||||||  ||||||||||||||||||| |||||||  || ||||||||| || |||||||| |||||| || ||||||||||| |||||| |||||    
T  31567856 gaccttcatgatatcaaattacaaaatttatagtactttcgcctcctgtaatt-gaacaaatttcggtttacgccttgccatatcattgattttgtacag 31567758  T
Q  237 tcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    || |||||| |||||||| |||||   ||||||||||||||||||    
T  31567757 tcaaaattcttgaaggtccaaaac--caaaaatcttcaaattaca 31567715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 8855585 - 8855480
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttc 273  Q
    ||||||||||| ||||||||||||||||||||   ||||| |||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||    
T  8855585 tttaccccctgcaatttgagcaaatttcagttactcccctaccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttc 8855488  T
Q  274 aaattaca 281  Q
    ||||||||    
T  8855487 aaattaca 8855480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 15885561 - 15885655
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || | || ||||||| ||||||| ||||| ||||||    
T  15885561 ttttaccccctgtaatttgagcaaatttcggtttaccccctgccatatcattgattttgtagaatcaaaattcaagaaggtccaaaaccaaaaaa 15885655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 4414115 - 4414009
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||  |||||||| ||||||| ||||||||||||||| |||||   |||||||||    
T  4414115 tttacccccttgtaatttgagaaaatttcggtttaccccctgccatatattcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatctt 4414018  T
Q  273 caaattaca 281  Q
    |||||||||    
T  4414017 caaattaca 4414009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 22756263 - 22756357
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||| || ||||||||||||||| |||||   ||||||||||||||||||    
T  22756263 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtacaatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 22756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 23188756 - 23188845
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||| |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  23188756 accccttgtaatttgagcaaatttcggtttaccccctgtcatatcttcgattttgtactgtcaaaattcatgaaggtctaaaaccaaaaa 23188845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 27331093 - 27330986
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttc 273  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||||||   ||||| ||||||| |||||||| |||||||||||| ||||||  ||||    
T  27331093 tttaccccctgcaatttgagcaaatttcggtttaccctctgccatatca---attttgtacagtcaaaattcataaaggtctaaaaccaaaaaa--cttc 27330999  T
Q  274 aaattacatggaa 286  Q
    |||||||| ||||    
T  27330998 aaattacaaggaa 27330986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 8861405 - 8861479
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  8861405 taatttgaacaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtctaaaa 8861479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 20024156 - 20024222
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccc 210  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  20024156 atggcatcaaattacaaaatttatggtaattttaacccctgtaatttgagtaaatttcagtttaccc 20024222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 25962978 - 25962884
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||  || ||||||||||||||| |||||   ||||||||||||||||||    
T  25962978 taatttgagcaaatttcggtttaccccctgccatatcttcgattttgtactatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 25962884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 26243289 - 26243183
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| || ||||| ||  ||| ||||||||||||||| |||||   |||||||||    
T  26243289 tttaccccctgttaatttgagcaaatttcggtttaccccctgccatatcttcaattttttattgtcaaaattcatgaaggtccaaaac--caaaaatctt 26243192  T
Q  273 caaattaca 281  Q
    |||||||||    
T  26243191 caaattaca 26243183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 31920248 - 31920142
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    ||||||||||| |||| ||||||||||| |||||||||| || ||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||  |||    
T  31920248 tttaccccctgcaattcgagcaaatttcggtttacccccctgacatattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--ctt 31920151  T
Q  273 caaattaca 281  Q
    |||||||||    
T  31920150 caaattaca 31920142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 34309497 - 34309603
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||| ||| |||||||||||| ||||||   ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  |||    
T  34309497 ttttgccctctgtaatttgagaaaattttgatttaccccctgtcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaactaaaaaa--ctt 34309594  T
Q  273 caaattaca 281  Q
    |||||||||    
T  34309595 caaattaca 34309603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 12148094 - 12148201
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| |||||||| ||||||  ||||  |||||||||||||| |||||||| ||||||| ||||||||||||||| |||||  |||||||||    
T  12148094 tttaccccctgttaatttgagaaaattttggtttgtccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatct 12148191  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  12148192 tcaaattaca 12148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 37869566 - 37869476
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||| | |||||||||  ||||||  |||||| |||||||||||||||||    
T  37869566 gaccttcatgtcatcaaattacaaaatttaaggtacttttgccccttataatttgagagaatttctatttacctcctgccatatcatcgat 37869476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 6896983 - 6897077
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||| |||  || ||||| ||||||||| |||||  |||||||||||||||||||    
T  6896983 taatttgagcaaatttcggtttaccccctgtcatatcttcgattttgtactatcaaaatttatgaaggtccaaaac--aaaaaatcttcaaattaca 6897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 21040041 - 21039947
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||  ||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |||||  ||||||| |||||||||||    
T  21040041 taattttagcaaattttggtttaccccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--aaaaaatattcaaattaca 21039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30916659 - 30916565
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||| |||| || |||||||||||||| ||||||   ||||||||||||||||||    
T  30916659 taatttgagcaaattttggtttaccccttgccatatcttcgattttgtacaatcaaaattcatgaaggtataaaac--caaaaatcttcaaattaca 30916565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 279
Target Start/End: Original strand, 20628067 - 20628213
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccc-----cctgtaatttgagcaaatttcagtttaccccctgccatatcatcgatttta 231  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||      || || |||| ||||||||| ||||| ||||||||| ||||||||||||     
T  20628067 gaccttcttggcatcaaattacaaaatttatggtactttcaccctctctactctagtttgtgcaaatttcggtttatcccctgccaaatcatcgattttg 20628166  T
Q  232 tacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    |||  || ||||||||||| ||  |||||  ||| |||||||||||||    
T  20628167 tactatcaaaattcatgaatgttcaaaac-caaataatcttcaaatta 20628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 21144067 - 21144157
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||   |||||||| |||| |||||||||||  |||||  |||||||| ||| ||||||||||||    
T  21144067 gaccttcatggcatcaaattacaaaatttgatgtacttttgccccttgtaatttgagagaattttggtttaccctctgtcatatcatcgat 21144157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 25233824 - 25233919
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||| ||||| |||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  25233824 taatttgagcgaatttcggtttaaccccctgccatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 25233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 25297984 - 25298079
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||| ||||| |||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   ||||||||||||||||||    
T  25297984 taatttgagcgaatttcggtttaaccccctgccatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 25298079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 4561802 - 4561896
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||||| | |||||||||||| || |||||   ||||||||||||||||||    
T  4561802 taatttgagcaaatttcggtttaccccctatcatatcttcgattttgtacagccaaaattcatgaagatccaaaac--caaaaatcttcaaattaca 4561896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 6117762 - 6117681
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| ||||| || |||||||||| |||||||| ||||||| |||||| |||||||| ||||| |||||    
T  6117762 taatttgagcaaatttccgtttatcctctgccatatcttcgattttgtacagtcaaaattcttgaaggtccaaaaccaaaaa 6117681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 17190901 - 17190792
Alignment:
Q  148 catcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcat 247  Q
    |||||||||  |||||||| |||||||| ||||| ||||||| |||| |||||   || || | ||| ||||||||||||||| ||||||| ||||||||    
T  17190901 catcaaattttaaaatttaaggtactttcaccccttgtaattagagcgaattttgattaacactctgtcatatcatcgattttgtacagtcaaaattcat 17190802  T
Q  248 gaaggtctaa 257  Q
    ||||||||||    
T  17190801 gaaggtctaa 17190792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 20355269 - 20355180
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||| |||||||||||||| |||||||| |||||| || |||| ||||||||||   |||||| ||||||||||||| |||||||||||    
T  20355269 accttgatggcatcaaattaaaaaatttaaggtactcttgccccttgtaatttgaaggaatttcggtttaccccctgcaatatcatcgat 20355180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 28796523 - 28796429
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||||  ||| ||||||||||||||  |||||   ||||||||||||||||||    
T  28796523 taatttaagcaaatttcggtttaccccctcccatatcttcgattttatatggtcaaaattcatgaaggttcaaaac--caaaaatcttcaaattaca 28796429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 42368613 - 42368519
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  | ||||||| ||||||||| | |||||| ||||||| ||||||||||||| | |||||  |||||||||||||||||||    
T  42368613 taatttgagcaaattttggcttaccccgtgccatatctttgattttgtacagtcaaaattcatgaagggccaaaac--aaaaaatcttcaaattaca 42368519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 20355173 - 20355097
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||||||  |||||   ||||||||||||||||||    
T  20355173 gtttaccccctaccatatcatcgattttgtacagtcaaaattcatgaaggttcaaaac--caaaaatcttcaaattaca 20355097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 23159641 - 23159562
Alignment:
Q  187 atttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||| |||||||||||  ||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  23159641 atttgagcaaatttcaatttaccccctgtaatatcttcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaa 23159562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 40765569 - 40765466
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||  ||| || ||||||||||||||| ||||| ||||||  |||    
T  40765569 tttaccccctgttaatttgag---atttcggtttaccccccgccatatcatcgattttgaacaatcaaaattcatgaaggtccaaaaccaaaaaa--ctt 40765475  T
Q  273 caaattaca 281  Q
    |||||||||    
T  40765474 caaattaca 40765466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 7577882 - 7577972
Alignment:
Q  177 accccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| |||||||||||||||| ||||||||| || |||||| | |||||| ||| ||| ||||||||||||||| ||||| |||||    
T  7577882 accccctgttaatttgagcaaatttcggtttaccccatgtcatatctttgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaa 7577972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 10819538 - 10819643
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| |||||||||| |||||||  |||||||||||||||||| |||||||| ||| ||  ||||||||||||||| ||| |   ||||| |||    
T  10819538 tttacccccttgtaatttgagaaaatttcgatttaccccctgccatatcttcgattttgtacggtaaaaattcatgaaggtccaaacc---aaaaaactt 10819634  T
Q  273 caaattaca 281  Q
    |||||||||    
T  10819635 caaattaca 10819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 281
Target Start/End: Original strand, 35687330 - 35687471
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttataca 235  Q
    ||||||||| ||||||||||||||||||||| |||| ||   ||||||| ||||||||||||||||  |||||| || | ||||||||||||||| |||     
T  35687330 gaccttcatagcatcaaattacaaaatttatagtac-ttccgcccctgtaaatttgagcaaatttcgatttacctcc-gtcatatcatcgattttgtacc 35687427  T
Q  236 gtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||| ||||| ||||| ||| ||||    ||||||||||||||||||    
T  35687428 gtcaaaatttatgaaagtccaaaa--tcaaaaatcttcaaattaca 35687471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 21125258 - 21125182
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    ||||||||||||||||| ||||||  || |||||||||||| ||||| ||||||| ||||||||||||||| |||||    
T  21125258 taatttgagcaaatttcggtttactaccatgccatatcatctattttgtacagtcaaaattcatgaaggtccaaaac 21125182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 30907496 - 30907421
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    |||||||||||||||||| |||| | |||| |||||| |||||||| ||| ||| ||||||||||||||| |||||    
T  30907496 taatttgagcaaatttcattttagctcctgtcatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac 30907421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 42778969 - 42778906
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    ||||||| ||||||||||||||||||| |||||| ||||| | |||||||||||||| ||||||    
T  42778969 atttcaggttaccccctgccatatcattgattttgtacagccaaaattcatgaaggtttaaaac 42778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 15885502 - 15885572
Alignment:
Q  144 atggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||||||||  ||||||||||||||||||||| |||| ||||||||||| ||||||   |||||||||||    
T  15885502 atggcatcaacgtacaaaatttatggtactttttccccttgtaatttgagtaaattttgttttaccccctg 15885572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 23108831 - 23108926
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctg-ccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||| || |  |||| ||||| ||||| ||||||| |||||||||||||||||||||   | ||||||||||||||||    
T  23108831 taatttgagcaaatttcggtttactccatttccatctcatctattttgtacagtcaaaattcatgaaggtctaaaac--cataaatcttcaaattaca 23108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 25088734 - 25088841
Alignment:
Q  174 tttaccccctg-taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||||||| | |||||| ||| ||| |||||||| |||||| |||||   | ||||||    
T  25088734 tttaccccctgctaatttgagcaaattttggtttagccccctgccatatcgttgattttgtactgtcaaaattcataaaggtccaaaac--cagaaatct 25088831  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  25088832 tcaaattaca 25088841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 25146703 - 25146810
Alignment:
Q  174 tttaccccctg-taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||||||| | |||||| ||| ||| |||||||| |||||| |||||   | ||||||    
T  25146703 tttaccccctgctaatttgagcaaattttggtttagccccctgccatatcgttgattttgtactgtcaaaattcataaaggtccaaaac--cagaaatct 25146800  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  25146801 tcaaattaca 25146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 12067966 - 12068019
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtc 238  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||| |||||||    
T  12067966 taatttgagcaaattttggtttaccccttgccatatcatcgattttgtacagtc 12068019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 38874536 - 38874630
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||| |||||||||| |||||||||||  |||||| |||||||| |||||   | ||||||||||||| |||||   ||||||||||||||||||    
T  38874536 taattttagcaaatttcggtttaccccctatcatatcttcgattttgtacagctaacattcatgaaggtccaaaac--caaaaatcttcaaattaca 38874630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 41185134 - 41185186
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgatttt 230  Q
    |||||||||||||||||||||||  |||||||||||| |||||| ||||||||    
T  41185134 ccccctgtaatttgagcaaattttggtttaccccctgtcatatcttcgatttt 41185186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 15399722 - 15399797
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccc 212  Q
    |||||||||  ||||||||||||||||||| ||||||||  |||| |||||||||||  ||||||  |||||||||    
T  15399722 gaccttcataacatcaaattacaaaatttaaggtactttcgccccttgtaatttgagataatttcgatttaccccc 15399797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 17668784 - 17668682
Alignment:
Q  159 aaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc-ctgccatatcatcgattttatacagtcgaaattcatgaaggtctaa 257  Q
    |||||||| ||||||||  ||||||||||||||||  |||||  ||||||||| |||| ||||| |||||||| ||| ||| |||||||  |||||| ||    
T  17668784 aaaatttaaggtactttcgccccctgtaatttgagagaattttggtttacccctctgcaatatcgtcgattttgtacggtcaaaattcacaaaggtccaa 17668685  T
Q  258 aac 260  Q
    |||    
T  17668684 aac 17668682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 29691149 - 29691043
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| ||||||||  |||||| ||||| ||| ||| ||||  || ||||| || |||| ||||||||||||||| |||||  ||||||||||    
T  29691149 tttaccccctgttaatttgagtgaatttcggtttaacccatgctatattttcaattttgtaaagtcaaaattcatgaaggtccaaaac--aaaaaatctt 29691052  T
Q  273 caaattaca 281  Q
    ||| |||||    
T  29691051 caacttaca 29691043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 11721518 - 11721478
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  11721518 ttttaccccctgtaatttgagcaaatttaggtttaccccct 11721478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 22756187 - 22756227
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  22756187 ttttaccccctgtaatttgagcaaatttaggtttaccccct 22756227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 41123267 - 41123307
Alignment:
Q  173 ttttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  41123267 ttttaccccctgtaatttgagcaaatttaggtttaccccct 41123307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 5818599 - 5818468
Alignment:
Q  150 tcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacccc--ctgccatatcatcgattttatacagtcgaaattcat 247  Q
    ||||||| |||||||||  |||||||  ||||| | ||||||| | |||||| |||||||    ||||||||||||||||||| || |||| ||| ||||    
T  5818599 tcaaatttcaaaatttaaagtactttcgccccc-gcaatttgatcgaatttcggtttaccttttctgccatatcatcgattttgtagagtc-aaaatcat 5818502  T
Q  248 gaaggtctaaaacgaaaaaaatcttcaaattacat 282  Q
    ||||||| |||||  |||||||||||||| |||||    
T  5818501 gaaggtccaaaac-taaaaaatcttcaaactacat 5818468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 29691170 - 29691139
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||||||||||||||||||||||||||||||    
T  29691170 tgtaatttgagcaaatttcagtttaccccctg 29691139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 42779058 - 42779020
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttt 175  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  42779058 gaccttcatgacatcaaattacaaaatttaaggtacttt 42779020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 6527388 - 6527441
Alignment:
Q  206 taccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||| || ||||||||||| ||||||| ||||| ||||||||| ||||    
T  6527388 taccccctgctatgtcatcgattttgtacagtcaaaatttatgaaggtccaaaa 6527441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 21144158 - 21144240
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||| |||||||||| |||||||||||| | ||| ||| ||  ||||||||||||||| ||| |   ||||||||||||||||||    
T  21144158 attttagtttaccccttgccatatcatctactttgtacggttaaaattcatgaaggtccaaacc--taaaaatcttcaaattaca 21144240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 18799 - 18880
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  18799 taatttgagcaaatttcagtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 18880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 3816598 - 3816738
Alignment:
Q  140 cttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcg 239  Q
    |||||||||||||||||| |||||||| ||||||||  |||||||||||||||| ||||||  ||||||| ||||| ||||||| |||||| ||| |||     
T  3816598 cttcatggcatcaaattataaaatttaaggtactttcgccccctgtaatttgagaaaattttggtttacctcctgctatatcattgattttgtacggtca 3816697  T
Q  240 aaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||  |||||||||| |||||  ||| |||||||||||||||    
T  3816698 aaacccatgaaggtcaaaaac-caaagaatcttcaaattaca 3816738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 9222526 - 9222620
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||    
T  9222526 taatttgaggaaatttcggtttaccccccgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa--cttcaaattaca 9222620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 9662941 - 9662856
Alignment:
Q  138 accttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcat 223  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||| || ||||||||    
T  9662941 accttcatgacatcaaattacaaaatttaaggtacttttgccccctgtaatttgagagaatttcagtttaccccttgtcatatcat 9662856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 12293051 - 12292945
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||| || ||||| ||||||| ||||||||||||||| |||||   |||||||||    
T  12293051 tttaccccctgttaatttgagcaaatttcggttttccccctgccatatcttcaattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatctt 12292954  T
Q  273 caaattaca 281  Q
    |||||||||    
T  12292953 caaattaca 12292945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 686490 - 686584
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||| ||||||||| ||||    ||||||||||||||||||    
T  686490 taatttgagcaaatttcggtttaccccctcccatatcttcgattttatacagtcaaaatttatgaaggtccaaaa--tcaaaaatcttcaaattaca 686584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 16659661 - 16659755
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||| ||| ||| ||||||||||||||| ||||   |||||||||||||||||||    
T  16659661 taatttgagcaaatttcggtttaccccctaccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaa--taaaaaatcttcaaattaca 16659755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 2270629 - 2270548
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  2270629 taatttgagcaaatttcggtttgccccctgccatattttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa 2270548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 10343674 - 10343609
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaa 250  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  10343674 taatttgagcaaacttcagtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaa 10343609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 16119882 - 16119776
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||| ||| |||||| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||||| ||| |   |||||||||    
T  16119882 tttacccccttgtattttgagtaaatttcggtttaccccctgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaatc--caaaaatctt 16119785  T
Q  273 caaattaca 281  Q
    |||||||||    
T  16119784 caaattaca 16119776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 33708751 - 33708820
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtc 254  Q
    |||||||||||||||||||||||| ||||||||| || |||||||| ||||||| |||||||||||||||    
T  33708751 taatttgagcaaatttcagtttactccctgccatgtcttcgattttgtacagtcaaaattcatgaaggtc 33708820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 34077532 - 34077608
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatga 249  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||| ||||||| ||||||||||    
T  34077532 tttaccccctgttaatttgagcaaatttcggtttaccccctaccatatcttcgattttgtacagtcaaaattcatga 34077608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 9044655 - 9044565
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||||||||||||||||||| | |||||| | |||||| ||| || ||||||||||  |||||  |||||||||||||||||||||||||    
T  9044655 gaccttcatggcatcaaattatataatttaagatactttcacctcccgtaatttgagagaattttggtttaccccctgccatatcatcgat 9044565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 14291257 - 14291167
Alignment:
Q  177 accccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| |||||||||||||||  ||||||||| ||||||||| |||||||| || |||| ||||||||||||||| ||||| |||||    
T  14291257 accccctgttaatttgagcaaattttggtttaccccttgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaa 14291167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 1227853 - 1227772
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  1227853 taatttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 1227772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 17158312 - 17158406
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||  ||||||| ||||||||| | |||||||| ||||||| ||||||||| ||||| |||||   ||||||||||||||||||    
T  17158312 taatttgagcaaattttggtttacctcctgccatagcttcgattttgtacagtcaaaattcatggaggtccaaaac--caaaaatcttcaaattaca 17158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 8237792 - 8237721
Alignment:
Q  208 ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| | ||||| ||||||  ||||||||||||    
T  8237792 ccccctgccatatcatcgattttgtacagtcaaaattcatgaaggaccaaaaccaaaaaa--cttcaaattaca 8237721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 10546048 - 10546155
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatct 271  Q
    |||||||||||| || ||||| |||||||  ||||||| |||||||||||||||||||| ||||||  ||||||||||||| | ||||| ||||||  ||    
T  10546048 tttaccccctgttaacttgagaaaatttcgatttacccacctgccatatcatcgattttgtacagttaaaattcatgaaggaccaaaaccaaaaaa--ct 10546145  T
Q  272 tcaaattaca 281  Q
    ||||||||||    
T  10546146 tcaaattaca 10546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 22495899 - 22495997
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    ||||||||||||||||| |||||| || ||||||||| |||||||| ||| ||| |||||| |||||||| |||||   |||||||||||||||||| ||    
T  22495899 taatttgagcaaatttcggtttactcc-tgccatatcttcgattttgtaccgtcaaaattcttgaaggtccaaaac--caaaaatcttcaaattacaagg 22495995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 26882254 - 26882159
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||| ||||| |||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||   | ||||||||||||||||    
T  26882254 taatttgagcgaatttcggtttagccccctgccatatcgtcgattttgtactgtcaaaattcatgaaggtccaaaac--cagaaatcttcaaattaca 26882159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 7321959 - 7322053
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| |||||||||||  |||||  ||||||||  ||| || ||||||||||||||| |||||   ||||||||||||||||||    
T  7321959 taatttgagcaaatttcggtttaccccctatcatatattcgattttgcacaatcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 7322053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 9235020 - 9234927
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  |||||||| ||||||||| |||| ||| ||||||| ||||| ||||||||| |||||   ||||||||||||||||||    
T  9235020 taatttgagcaaatttcgatttacccc-tgccatatcttcgagtttgtacagtcaaaatttatgaaggtccaaaac--caaaaatcttcaaattaca 9234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 9676419 - 9676500
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| ||||| ||  || |||||| |||||||||||||||| |||||||||||| || ||||| |||||    
T  9676419 taatttgagcaaatttcggtttaaccgatgtcatatcttcgattttatacagtcaaaattcatgaagatccaaaaccaaaaa 9676500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 18274296 - 18274365
Alignment:
Q  181 cctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaa 250  Q
    |||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||  ||||| |||||    
T  18274296 cctgtaatttgaacgaatttcggtttaccccctgccatatcatcgattttgtacagttaaaattaatgaa 18274365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 21544307 - 21544226
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| | |||||| ||| ||| ||||||||||||||| ||||| |||||    
T  21544307 taatttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 21544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 34414469 - 34414563
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  |||| || ||| |||||| |||||||| ||||||  ||||||||||||||| |||||  ||||||||||||| |||||    
T  34414469 taatttgagcaaatttcgatttatcctctgtcatatcttcgattttgtacagttaaaattcatgaaggtccaaaac--aaaaaatcttcaagttaca 34414563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 25167106 - 25167027
Alignment:
Q  140 cttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccata 219  Q
    ||||||||||||||||||||||||||| ||||||||   ||| |||||||||||  |||||| ||||||| || ||||||    
T  25167106 cttcatggcatcaaattacaaaatttaaggtactttcgtcccttgtaatttgagagaatttcggtttacctcccgccata 25167027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 18591306 - 18591392
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||||||| |||||||| ||||||| |||||||| ||| |||||| || ||||| ||||||| ||||||||||| ||| ||||    
T  18591306 tttaccccctgttaatttgagaaaatttcggtttaccctctgtcatatcttcaattttgtacagtcaaaattcatgaatgtccaaaa 18591392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 26475940 - 26475858
Alignment:
Q  185 taatttgagcaaatttcagtttaccccc-tgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||| |||||||||| |||||||||| ||| ||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  26475940 taattttagcaaatttcggtttacccccctgctatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 26475858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 32216929 - 32217033
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| ||||||||||||||||  |||||||  || |||||| | |||||| ||||||| ||||||||||||||| |||||   |||| ||||    
T  32216929 tttaccccctgttaatttgagcaaatttcgatttaccc--tgtcatatctttgattttgtacagtcaaaattcatgaaggtccaaaac--caaaactctt 32217024  T
Q  273 caaattaca 281  Q
    |||||||||    
T  32217025 caaattaca 32217033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 25167018 - 25166934
Alignment:
Q  197 atttcagtttaccccct-gccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| | ||||||||||||||| || |||| |||||||| |||||| ||||  ||||||||||| ||||||||    
T  25167018 atttcagtttacccccttgtcatatcatcgattttgtatagtcaaaattcataaaggtccaaaa-taaaaaaatctttaaattaca 25166934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 5460021 - 5460085
Alignment:
Q  175 ttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtc 238  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||| |||||||||| |||||||    
T  5460021 ttaccccctagtaatttgagcaaatttcggtttatcccctaccataacatcgattttgtacagtc 5460085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 9044564 - 9044501
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtc-gaaattcatgaaggtctaaaa 259  Q
    ||||||||||||||| |||||||||||||||||| || ||||  ||||||||||||||| ||||    
T  9044564 atttcagtttaccccttgccatatcatcgattttgtatagtcaaaaattcatgaaggtccaaaa 9044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 18592187 - 18592095
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    ||||||||||||||||  |||||  || ||||||||| | ||||||||||| || |||| |||||||||| |||||   ||||||||||||||||    
T  18592187 taatttgagcaaattttggtttaatccatgccatatctttgattttatacaatcaaaatccatgaaggtccaaaac--caaaaatcttcaaatta 18592095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 22362795 - 22362720
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaac 260  Q
    ||||||||||||||||| ||||| ||| |  |||||| |||||||| ||| ||| ||||||||||||||| |||||    
T  22362795 taatttgagcaaatttcggtttaacccttatcatatcttcgattttgtacggtcaaaattcatgaaggtccaaaac 22362720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 3108711 - 3108774
Alignment:
Q  216 catatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||||| || ||||| ||||||||| |||||   ||||||||||||||||||    
T  3108711 catatcatcgattttatacaatcaaaattaatgaaggtccaaaac--caaaaatcttcaaattaca 3108774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 13729134 - 13729229
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||  |||||| ||||| ||||||| |||||| |||||||| ||| ||| |||| |||||||||| ||||| ||||  ||||||||||||||    
T  13729134 taatttgagtgaatttcggtttagccccctgacatatcgtcgattttgtactgtcaaaatacatgaaggtccaaaaccaaaa--atcttcaaattaca 13729229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 32603683 - 32603776
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||||  ||| || ||  |||||||| ||||||| ||||||||||||||| |||||    |||||||||||||||||    
T  32603683 taatttgagcaaatttcgttttaccatctgtcaaatattcgattttgtacagtcaaaattcatgaaggtccaaaac---caaaatcttcaaattaca 32603776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 21556103 - 21556163
Alignment:
Q  178 ccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtc 238  Q
    |||||||||||||||| ||||||||||||||||  |||||||| ||| | ||| |||||||    
T  21556103 ccccctgtaatttgagaaaatttcagtttaccctgtgccatattatcaactttgtacagtc 21556163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 10671918 - 10671868
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctgccatatcatc 224  Q
    |||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  10671918 tttaccccctcgtaatttgagcaaatttcag-ttaccctctgccatatcatc 10671868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 13462766 - 13462715
Alignment:
Q  215 ccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||| |||||||||||||| |||||||||||||| || ||| |||||    
T  13462766 ccatatcattgattttatacagtcaaaattcatgaaggtttagaaccaaaaa 13462715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 359860 - 359906
Alignment:
Q  184 gtaatttgagcaaatttcagtttaccccctgccatatcatcgatttt 230  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||    
T  359860 gtaatttgagcaaattttagtttaccccctatcagatcatcgatttt 359906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 11107730 - 11107825
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||| |||||  ||||| |||||||||||||| |||||||| ||| ||  |||||||||||| || |||||   | ||||||||||||||||    
T  11107730 taatttgagcgaattttggtttagccccctgccatatcgtcgattttgtactgttaaaattcatgaagttccaaaac--tagaaatcttcaaattaca 11107825  T

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Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 29942679 - 29942608
Alignment:
Q  208 ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||| |||||||| ||| |||  |||||||||||||| ||||    ||||||||||||||||||    
T  29942679 ccccctgccatatcttcgattttgtactgtcagaattcatgaaggtccaaaa--tcaaaaatcttcaaattaca 29942608  T

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Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 9676380 - 9676413
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccc 210  Q
    ||||| ||||||||||||||||||||||||||||    
T  9676380 accccttgtaatttgagcaaatttcagtttaccc 9676413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 9662845 - 9662768
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatc-ttcaaattaca 281  Q
    |||||||||||  |||||| |||| ||| ||||||| |||||||| |||||| |||||  |||||||| |||||||||||    
T  9662845 gtttaccccctatcatatcgtcgactttgtacagtcaaaattcataaaggtccaaaac--aaaaaatctttcaaattaca 9662768  T

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Target: scaffold0004 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 212701 - 212595
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||||||||||   |||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||   |||||||||    
T  212701 tttaccccctgttaatttgagcaaattttgatttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatctt 212604  T
Q  273 caaattaca 281  Q
    |||||||||    
T  212603 caaattaca 212595  T

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Target: scaffold0004; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 82403 - 82313
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgat 227  Q
    ||||||||||  |||||||||||||||||| ||||||||  |||| |||||||||||  |||||| ||||||||||||| |||||||||||    
T  82403 gaccttcatgatatcaaattacaaaatttaaggtactttcgccccatgtaatttgagagaatttcggtttaccccctgctatatcatcgat 82313  T

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Target: scaffold0004; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 82306 - 82227
Alignment:
Q  203 gtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattacatgg 284  Q
    ||||||| | || ||||| ||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  82306 gtttacctcttgtcatattatcaattttgtacagtcaaaattcatgaaggtctaaaac-aaaaaaat-ttcaaattacatgg 82227  T

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Target: scaffold0067 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 25936 - 25845
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttacc-ccctgccatatcatcgat 227  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||  |||||| ||||||| ||||| ||||||||||||    
T  25936 gaccttcatggcatcaaattacaaaatttaaggtactttcgccccttgtaatttgagagaatttcggtttaccaccctgtcatatcatcgat 25845  T

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Target: scaffold0003 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 306733 - 306667
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagt 204  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  306733 gaccttcatggcatcaaattacaaaatttatggtac-tttcgcccctgtaatttgagcaaatttcagt 306667  T

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Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 316612 - 316515
Alignment:
Q  182 ctgtaatttgagcaaatttcagtttac-cccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattac 280  Q
    |||||||||||| |||||||||||||| ||| |  ||||||||||||||| ||||||| |||||||||||| || ||| |  ||| ||||||||||||||    
T  316612 ctgtaatttgagtaaatttcagtttacacccttatcatatcatcgattttgtacagtc-aaattcatgaagttcaaaacc--aaataatcttcaaattac 316516  T

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Target: scaffold0430 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 12670 - 12763
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||| ||||| |||||||||| |||| |||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||| |||||    
T  12670 tttaccccctgttaatttaagcaaatttcggtttgccccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 12763  T

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Target: scaffold0430; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 12639 - 12680
Alignment:
Q  174 tttaccccct-gtaatttgagcaaatttcagtttaccccctg 214  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  12639 tttacccccttgtaatttgagcaaatttcggtttaccccctg 12680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 9400 - 9315
Alignment:
Q  183 tgtaatttgagcaaatttcagtttaccc-cctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaa 267  Q
    |||||||||||||||||||  ||||||| ||| ||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||    
T  9400 tgtaatttgagcaaatttcgatttaccctcctcccatatcttcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaa 9315  T

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Target: scaffold0121 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 12656 - 12550
Alignment:
Q  174 tttaccccctgt-aatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatctt 272  Q
    |||||||||||| |||||||  ||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| |||||   |||||||||    
T  12656 tttaccccctgttaatttgacaaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatggaagtccaaaac--caaaaatctt 12559  T
Q  273 caaattaca 281  Q
    |||||||||    
T  12558 caaattaca 12550  T

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Target: scaffold0026 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 84341 - 84276
Alignment:
Q  194 caaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaa 259  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  84341 caaatttcggtttaccccctgctatatcatcgattttgtacagtcgaaattcatgaaggtccaaaa 84276  T

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Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 332240 - 332146
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||| |||||  |||||| |||||||| ||||||| ||||||||||||||| |||||   ||||||||||||||||||    
T  332240 taatttgagcaaatttctgtttatcccctatcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaac--caaaaatcttcaaattaca 332146  T

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Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 432592 - 432673
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||| ||| ||| |||||||||| |||| ||||| |||||    
T  432592 taattttagcaaatttcggtttaccccctgccatatcttcgattttgtaccgtcaaaattcatgatggtccaaaaccaaaaa 432673  T

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Target: scaffold1462 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 300 - 220
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtc 254  Q
    |||||||||||||||||||| ||||||  ||||||||||| ||||||| |||||||| ||| ||| |||||||||||||||    
T  300 tttaccccctgtaatttgagaaaatttatgtttaccccctaccatatcgtcgattttgtactgtcaaaattcatgaaggtc 220  T

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Target: scaffold1462; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 327 - 290
Alignment:
Q  177 accccctgtaatttgagcaaatttcagtttaccccctg 214  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  327 accccttgtaatttgagaaaatttcagtttaccccctg 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 34960 - 35042
Alignment:
Q  197 atttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    |||||||||||||||||  ||||||||||||||| || |||| |||||||||||||||  ||||  | |||||||||||||||||    
T  34960 atttcagtttaccccctatcatatcatcgattttgtatagtcaaaattcatgaaggtccgaaac--acaaaatcttcaaattaca 35042  T

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Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 63230 - 63311
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    ||||||||||||||||| |||||||||||  |||||| | |||||| ||| ||| ||||||||||||||| ||||| |||||    
T  63230 taatttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaa 63311  T

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Target: scaffold0289 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 6901 - 6820
Alignment:
Q  185 taatttgagcaaatttcagtttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||| |||||  ||||||||| || |||||  |||||||| ||||||| ||||||||||||||| ||||| |||||    
T  6901 taatttgagcgaattttggtttaccccatgtcatattttcgattttgtacagtcaaaattcatgaaggtcaaaaaccaaaaa 6820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 3484 - 3578
Alignment:
Q  185 taatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaattaca 281  Q
    ||||||||||||||||| ||||| |||||| ||| ||  |||||||| ||||||| |||||||||||||| | |||| |||||||  |||||||||||    
T  3484 taatttgagcaaatttcggtttaccccccttccaaattttcgattttgtacagtcaaaattcatgaaggt-tcaaacaaaaaaaa--ttcaaattaca 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 13339 - 13286
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaattt 190  Q
    |||||||||| ||||||||||||||||||| ||||||||  |||| ||||||||    
T  13339 gaccttcatgacatcaaattacaaaatttaaggtactttcgccccatgtaattt 13286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 242524 - 242609
Alignment:
Q  182 ctgtaatttgagcaaatttcagttta-ccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaa 266  Q
    |||||||||||||||||||  ||||| ||||||| |||||| |||||||| ||||||  ||||| | ||||||| ||||| |||||    
T  242524 ctgtaatttgagcaaatttaggtttacccccctgtcatatcttcgattttgtacagtaaaaattaacgaaggtccaaaaccaaaaa 242609  T

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Target: scaffold0110 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 23217 - 23334
Alignment:
Q  137 gaccttcatggcatcaaattacaaaatttatggtacttttaccccctgtaatttgagcaaatttcagtttaccccctgccatatcatcgattttatacag 236  Q
    ||||||||||||||||||||||||||||||  ||| ||   ||| || |||||||||  |||||| |||||      |||||||||||||||||||| ||    
T  23217 gaccttcatggcatcaaattacaaaatttaacgtatttccgccctctataatttgagagaatttcggttta------gccatatcatcgattttatatag 23310  T
Q  237 tcgaaattcatgaaggtctaaaac 260  Q
    |  ||||| |||||| || |||||    
T  23311 ttaaaatttatgaagctccaaaac 23334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 145108 - 145181
Alignment:
Q  204 tttaccccctgccatatcatcgattttatacagtcgaaattcatgaaggtctaaaacgaaaaaaatcttcaaatta 279  Q
    |||||||||| |||||||||| ||||| |||||||  |||||||||||||| ||||    ||||||||||||||||    
T  145108 tttaccccctaccatatcatctattttgtacagtcacaattcatgaaggtccaaaa--tcaaaaatcttcaaatta 145181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 145056 - 145095
Alignment:
Q  174 tttaccccctgtaatttgagcaaatttcagtttaccccct 213  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  145056 tttaccccctataatttgagcaaatttcaatttaccccct 145095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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