View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21316_low_8 (Length: 245)
Name: NF21316_low_8
Description: NF21316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21316_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 44200054 - 44200267
Alignment:
| Q |
18 |
gaaataaaaactactaaatcaccatcaacatatgttcacaatccatactgattagcactccatgcataaagtgtattactagcaagaaaaatcaagcact |
117 |
Q |
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| T |
44200054 |
gaaataaaaactactaaatcaccatcaacatatgttcacaatccatactgattggcactccatgcataaagtgtattactagcaagaaaaatcaagcact |
44200153 |
T |
|
| Q |
118 |
gcagctaacagcatactcgttaccataaacttgatgagacatcccagtttttcaaattagtaaatccattttactatttataaatacatgtgcatacaca |
217 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44200154 |
gcagctaacagcaaactcgttaccataaacttgatgagacatcccggtttttcaaattagtaaatccattttactatttataaatacatgtgcatacaca |
44200253 |
T |
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| Q |
218 |
aacacggtaaaatc |
231 |
Q |
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|||||||||||||| |
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| T |
44200254 |
aacacggtaaaatc |
44200267 |
T |
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