View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21316_low_9 (Length: 240)
Name: NF21316_low_9
Description: NF21316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21316_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 7930669 - 7930886
Alignment:
| Q |
9 |
ttatactaacacatcatattaataaagtttgcttatataggaaaaaactactattcaagcacgtaacaaaagatttgaaaacacaaatttgggttagatc |
108 |
Q |
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| T |
7930669 |
ttatactaacacatcatattaataaagtttgcttatataggaaaaaactactattcaagcacgtaacaaaagatttgaaaacacaaatttgggttagatc |
7930768 |
T |
|
| Q |
109 |
ctttaatttcgggcatagatcttcttctatgtagcattaaaaacacttatgcttgcgtgcattagctcattctctagagcaagatctcctcgtttgttgc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7930769 |
ctttaatttcgggcatagatcttcttctatgtagcattaaaaacacttatgcttgcgtgcattagctcattctctagagcaagatctcctcgtttgttgc |
7930868 |
T |
|
| Q |
209 |
taatcacatgttcatatt |
226 |
Q |
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|||||||||||||||||| |
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| T |
7930869 |
taatcacatgttcatatt |
7930886 |
T |
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