View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21317_high_17 (Length: 205)
Name: NF21317_high_17
Description: NF21317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21317_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 1422944 - 1423115
Alignment:
| Q |
19 |
aagaccaattcaacatcacaaaatcatcccataattctctcgagtttgcttttctccactgttatactttcttttttattctatctatctatcatatttc |
118 |
Q |
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| T |
1422944 |
aagaccaattcaacatcacaaaatcatcccataattctctcgagtttccttttctccactgttatactttcttttttattctatctatctatcatatttc |
1423043 |
T |
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| Q |
119 |
tccagtttctatcatgttcatcgattcttcatttttgtataaaatttctaattaggtttaagtttatctgtg |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1423044 |
tccagtttctatcatgttcatcgattcttcatttttgtataaaatttctaattaggtttaagtttatctgtg |
1423115 |
T |
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