View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21317_high_8 (Length: 313)
Name: NF21317_high_8
Description: NF21317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21317_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 14880088 - 14880387
Alignment:
| Q |
1 |
aatattaggtgaaaacagaatggaaaatatgcaatatcatataacctttatattcataaacctccatattcaagtagtattggaatgacatataaattga |
100 |
Q |
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| T |
14880088 |
aatattaggtgaaaacagaatggaaaatatgcaatatcatataacctttatattcataaagctccatattcaagtagtattggaatgacatataaattga |
14880187 |
T |
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| Q |
101 |
aatactacaataactaaataaaatcaagaacagaaacattaaacaaaagccagtaaaaatcaatgttatttaaagccactttttcatcaatccaaaggag |
200 |
Q |
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| T |
14880188 |
aatactacaataactaaataaaatcaagaacagaaacattaaacaaaagccagtaaaaatcaatgttatttaaagccactttctcatcaatccaaaggag |
14880287 |
T |
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| Q |
201 |
aaataatttcagttgtacgaatccatcttcatcttgtcaaactccacttttttgttcttggatacatgtagaagaagatcacatacttgccttgatgatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
14880288 |
aaataatttcagttgtacgaatccatcttcatcttgtcaaactccacttttttgttctaggatacatgtagaagaagatcacatacttgccttgatgatg |
14880387 |
T |
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