View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21318_high_1 (Length: 614)

Name: NF21318_high_1
Description: NF21318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21318_high_1
NF21318_high_1
[»] chr2 (30 HSPs)
chr2 (1-600)||(42131354-42131932)
chr2 (294-366)||(34652025-34652097)
chr2 (262-361)||(10285836-10285936)
chr2 (294-382)||(15120192-15120280)
chr2 (266-369)||(43205289-43205393)
chr2 (294-364)||(1939323-1939393)
chr2 (276-365)||(22681175-22681265)
chr2 (297-369)||(10285367-10285439)
chr2 (294-382)||(32821818-32821906)
chr2 (261-382)||(1742005-1742127)
chr2 (323-369)||(33525953-33525999)
chr2 (298-365)||(4606938-4607006)
chr2 (262-345)||(11513874-11513958)
chr2 (294-366)||(36415663-36415734)
chr2 (295-346)||(750680-750731)
chr2 (276-330)||(18066118-18066173)
chr2 (295-382)||(18179213-18179300)
chr2 (294-365)||(29316765-29316836)
chr2 (262-388)||(33256716-33256843)
chr2 (294-365)||(43065440-43065511)
chr2 (294-368)||(10563545-10563619)
chr2 (262-379)||(17221516-17221634)
chr2 (276-365)||(28039322-28039412)
chr2 (279-375)||(680496-680593)
chr2 (278-382)||(5133764-5133869)
chr2 (293-366)||(41042011-41042084)
chr2 (297-366)||(43635090-43635159)
chr2 (262-357)||(3102669-3102764)
chr2 (309-369)||(13189372-13189432)
chr2 (294-365)||(40279416-40279488)
[»] chr4 (29 HSPs)
chr4 (1-111)||(24935988-24936098)
chr4 (294-365)||(50800020-50800090)
chr4 (262-351)||(54325041-54325131)
chr4 (294-369)||(53673644-53673719)
chr4 (295-365)||(488116-488186)
chr4 (280-345)||(6364143-6364209)
chr4 (294-379)||(4798542-4798627)
chr4 (299-376)||(6428032-6428109)
chr4 (324-369)||(32071907-32071952)
chr4 (294-365)||(2996582-2996653)
chr4 (299-382)||(21952962-21953045)
chr4 (294-365)||(30631965-30632036)
chr4 (294-361)||(42121497-42121563)
chr4 (295-369)||(2874610-2874684)
chr4 (263-382)||(23819066-23819186)
chr4 (299-369)||(25309550-25309620)
chr4 (262-365)||(53155239-53155340)
chr4 (300-369)||(27123338-27123407)
chr4 (294-351)||(42866077-42866134)
chr4 (321-382)||(52754635-52754696)
chr4 (397-429)||(8422765-8422797)
chr4 (294-362)||(11264310-11264378)
chr4 (298-358)||(14011247-14011307)
chr4 (294-346)||(17822874-17822926)
chr4 (295-366)||(19304557-19304629)
chr4 (299-347)||(19429723-19429771)
chr4 (299-371)||(27405823-27405895)
chr4 (294-342)||(31006027-31006075)
chr4 (317-369)||(45128296-45128348)
[»] chr3 (32 HSPs)
chr3 (294-382)||(37273143-37273231)
chr3 (277-382)||(21574482-21574587)
chr3 (294-382)||(43115065-43115153)
chr3 (294-369)||(9279312-9279387)
chr3 (294-366)||(31010411-31010483)
chr3 (302-364)||(13804794-13804856)
chr3 (276-365)||(11253492-11253581)
chr3 (293-358)||(34254805-34254870)
chr3 (262-366)||(41452499-41452604)
chr3 (294-382)||(1217773-1217861)
chr3 (294-346)||(41644454-41644506)
chr3 (294-366)||(54180769-54180841)
chr3 (262-368)||(2201104-2201211)
chr3 (294-353)||(22214661-22214720)
chr3 (302-369)||(42537057-42537124)
chr3 (262-320)||(43875624-43875683)
chr3 (294-365)||(49465655-49465726)
chr3 (294-353)||(51130759-51130818)
chr3 (299-365)||(36200110-36200176)
chr3 (324-382)||(41807172-41807230)
chr3 (299-365)||(50952347-50952413)
chr3 (294-343)||(21367676-21367725)
chr3 (324-369)||(41724251-41724296)
chr3 (297-366)||(43875477-43875546)
chr3 (294-347)||(43948664-43948717)
chr3 (294-350)||(2719477-2719533)
chr3 (262-369)||(24887270-24887377)
chr3 (294-382)||(36646355-36646443)
chr3 (294-358)||(44488892-44488956)
chr3 (293-365)||(45541579-45541651)
chr3 (294-362)||(48048975-48049043)
chr3 (298-366)||(49546473-49546541)
[»] chr7 (25 HSPs)
chr7 (295-369)||(40191305-40191379)
chr7 (295-369)||(27626109-27626183)
chr7 (276-365)||(38010704-38010794)
chr7 (261-368)||(3468589-3468697)
chr7 (294-382)||(39334202-39334290)
chr7 (294-366)||(45078287-45078359)
chr7 (294-369)||(33645947-33646021)
chr7 (294-369)||(39360032-39360107)
chr7 (324-382)||(24967100-24967158)
chr7 (294-382)||(7244689-7244777)
chr7 (294-366)||(18749806-18749878)
chr7 (299-359)||(39280983-39281043)
chr7 (294-382)||(39345480-39345568)
chr7 (294-366)||(48157109-48157181)
chr7 (279-366)||(12234878-12234964)
chr7 (294-353)||(24363603-24363662)
chr7 (255-329)||(27481320-27481395)
chr7 (324-367)||(39539769-39539812)
chr7 (397-450)||(24363511-24363564)
chr7 (262-346)||(40688995-40689080)
chr7 (325-381)||(12834936-12834992)
chr7 (317-369)||(29290365-29290417)
chr7 (294-334)||(30812157-30812197)
chr7 (317-369)||(39551534-39551586)
chr7 (262-358)||(39907992-39908088)
[»] chr5 (22 HSPs)
chr5 (277-382)||(32172644-32172750)
chr5 (296-382)||(4619718-4619804)
chr5 (294-365)||(40205064-40205135)
chr5 (294-382)||(41957424-41957512)
chr5 (294-365)||(37611205-37611276)
chr5 (294-365)||(37787935-37788006)
chr5 (294-352)||(31723814-31723872)
chr5 (262-366)||(18704025-18704130)
chr5 (265-369)||(36542268-36542373)
chr5 (294-346)||(4014433-4014485)
chr5 (294-382)||(36774680-36774768)
chr5 (294-369)||(7674657-7674732)
chr5 (294-365)||(17368685-17368756)
chr5 (266-359)||(32408588-32408682)
chr5 (295-369)||(35960423-35960497)
chr5 (324-369)||(11700364-11700409)
chr5 (295-352)||(30217092-30217149)
chr5 (294-350)||(7319013-7319069)
chr5 (294-346)||(7984978-7985030)
chr5 (293-365)||(10125708-10125780)
chr5 (338-378)||(11457151-11457191)
chr5 (294-346)||(39105473-39105525)
[»] chr8 (22 HSPs)
chr8 (293-369)||(25869252-25869328)
chr8 (262-343)||(10075563-10075645)
chr8 (262-359)||(11795068-11795166)
chr8 (294-366)||(4055605-4055677)
chr8 (262-365)||(11183521-11183625)
chr8 (262-351)||(28769343-28769433)
chr8 (293-367)||(36643881-36643955)
chr8 (299-368)||(39866721-39866790)
chr8 (294-371)||(43504760-43504837)
chr8 (294-382)||(33553249-33553337)
chr8 (294-369)||(5088861-5088936)
chr8 (294-369)||(11569443-11569518)
chr8 (294-369)||(39551195-39551270)
chr8 (302-368)||(11185238-11185304)
chr8 (262-367)||(31862469-31862575)
chr8 (293-346)||(11494154-11494207)
chr8 (317-366)||(43704365-43704414)
chr8 (262-369)||(11415130-11415238)
chr8 (294-369)||(29973160-29973236)
chr8 (262-369)||(30013194-30013302)
chr8 (294-366)||(31884603-31884673)
chr8 (293-353)||(42215084-42215144)
[»] chr6 (25 HSPs)
chr6 (294-369)||(2034432-2034507)
chr6 (294-365)||(4324443-4324514)
chr6 (293-378)||(2455818-2455903)
chr6 (293-366)||(4420651-4420724)
chr6 (294-369)||(28088209-28088283)
chr6 (262-363)||(3155152-3155253)
chr6 (274-359)||(3168257-3168343)
chr6 (262-365)||(2027396-2027500)
chr6 (314-366)||(2027787-2027839)
chr6 (262-369)||(6014511-6014619)
chr6 (311-367)||(9667973-9668029)
chr6 (276-382)||(281821-281928)
chr6 (294-365)||(20368170-20368241)
chr6 (296-367)||(34939755-34939826)
chr6 (322-368)||(1019597-1019643)
chr6 (260-365)||(3528777-3528883)
chr6 (294-368)||(4246419-4246493)
chr6 (277-367)||(33301697-33301787)
chr6 (262-366)||(2117379-2117484)
chr6 (300-369)||(2460137-2460206)
chr6 (323-368)||(3738107-3738152)
chr6 (262-382)||(10616514-10616635)
chr6 (276-369)||(30523650-30523743)
chr6 (296-365)||(30523948-30524017)
chr6 (294-358)||(19275633-19275697)
[»] chr1 (45 HSPs)
chr1 (294-367)||(27140487-27140560)
chr1 (265-359)||(44422678-44422773)
chr1 (265-382)||(4622072-4622190)
chr1 (261-382)||(10439661-10439783)
chr1 (262-359)||(12477283-12477381)
chr1 (294-364)||(35080060-35080130)
chr1 (294-359)||(12564495-12564560)
chr1 (294-363)||(39777672-39777741)
chr1 (293-365)||(4699605-4699677)
chr1 (286-365)||(17778957-17779037)
chr1 (317-369)||(19412583-19412635)
chr1 (294-366)||(30014067-30014139)
chr1 (280-350)||(2294905-2294976)
chr1 (294-369)||(4548730-4548805)
chr1 (294-369)||(6231802-6231877)
chr1 (294-369)||(15437972-15438047)
chr1 (323-382)||(15581292-15581351)
chr1 (322-369)||(17628636-17628683)
chr1 (296-367)||(26184759-26184830)
chr1 (294-361)||(28262613-28262680)
chr1 (298-365)||(35925703-35925770)
chr1 (262-352)||(39270428-39270519)
chr1 (276-361)||(11211108-11211194)
chr1 (278-351)||(14629970-14630044)
chr1 (276-365)||(15942737-15942827)
chr1 (263-376)||(16322826-16322940)
chr1 (294-364)||(27963361-27963431)
chr1 (265-349)||(47960629-47960715)
chr1 (297-358)||(16981933-16981994)
chr1 (294-347)||(35179148-35179201)
chr1 (295-332)||(35590915-35590952)
chr1 (292-369)||(43338123-43338200)
chr1 (294-359)||(52190138-52190203)
chr1 (398-434)||(2522703-2522739)
chr1 (263-342)||(4078162-4078242)
chr1 (294-346)||(5047155-5047207)
chr1 (262-382)||(6262715-6262835)
chr1 (293-353)||(6279407-6279467)
chr1 (300-368)||(15579497-15579565)
chr1 (299-367)||(28689440-28689508)
chr1 (294-366)||(29834894-29834966)
chr1 (295-363)||(37593676-37593744)
chr1 (262-365)||(45205044-45205148)
chr1 (294-346)||(45975699-45975751)
chr1 (294-365)||(51695484-51695556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (294-369)||(306335-306410)
[»] scaffold0147 (1 HSPs)
scaffold0147 (301-369)||(12690-12758)


Alignment Details
Target: chr2 (Bit Score: 486; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 1 - 600
Target Start/End: Original strand, 42131354 - 42131932
Alignment:
Q  1 ctgatatgccacttggaccggcacctactattccaattctggtgtttaatggcaaggaaggatgtagcttggagaattgctcctctattgatctttcagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131354 ctgatatgccacttggaccggcacctactattccaattctggtgtttaatggcaaggaaggatgtagcttggagaattgctcctctattgatctttcagg 42131453  T
Q  101 atccatcttttaaatcaatacctgtgagaaagctgctgaaagcagttgaggaaatcagtactactacaatgactgcattcgtctttacaagaattgaaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     ||||||||||||    
T  42131454 atccatcttttaaatcaatacctgtgagaaagctgctgaaagcagttgaggaaatcagtactactac---------------------aagaattgaaat 42131532  T
Q  201 tcgggaacatgtttggataaacaacttaattaggcgtgtatcatataactaaagtaaaccgaagtcaaactattctcatataagatataagcattttcat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131533 tcgggaacatgtttggataaacaacttaattaggcgtgtatcatataactaaagtaaaccgaagtcaaactattctcatataagatataagcattttcat 42131632  T
Q  301 aagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaaaattcttgtttccttaag 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  42131633 aagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaaaattctcgttttcttaag 42131732  T
Q  401 tgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaaaggaagttgctaaacaagtttggttactcagggaatttaatatgatcttc 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42131733 tgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaaaggaagttgctaaacaagtttggttactcagggaatttgatatgatcttc 42131832  T
Q  501 tgaacaagnnnnnnnnnncctttccttaagggataagttactaaatttagaaaagacatgattcacaagttttagagataaaatggagagggagttatat 600  Q
    ||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131833 tgaacaagtttttttttttctttccttaagggataagttactaaatttagaaaagacatgattcacaagttttagagataaaatggagagggagttatat 42131932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 34652097 - 34652025
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||||||||| |||||| |||| ||||||||| | ||| |||||||||||||||| ||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 34652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 10285836 - 10285936
Alignment:
Q  262 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||||||  | ||||||||| |||||| | ||| ||||||||| ||| ||||||||| ||||||||| | ||| |||||||||||||||| ||||||    
T  10285836 aagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagt 10285935  T
Q  361 t 361  Q
    |    
T  10285936 t 10285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 15120192 - 15120280
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||| |||||||||||||||| ||||   ||||||||||||| ||||| ||| |||||| ||||||||||||||| | |||| |||||    
T  15120192 ttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaa 15120280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 43205289 - 43205393
Alignment:
Q  266 caaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 364  Q
    |||||| || ||||||||||||||| |  |||||||||||||||| ||||| |||| ||||||||| | ||| ||| ||  |||||||||||| ||||||    
T  43205289 caaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaacagtttgcggacatgttatatgttgtt 43205388  T
Q  365 tccat 369  Q
    |||||    
T  43205389 tccat 43205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 1939393 - 1939323
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 364  Q
    ||||||||||||||  |||||| |||| ||||||||| | ||| |||||||||||||||| ||||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 22681265 - 22681175
Alignment:
Q  276 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||| |||||||  ||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||| |||||||||  |||||||    
T  22681265 tcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttt 22681175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 10285367 - 10285439
Alignment:
Q  297 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||| |||||||| || |||||||| ||||||||| ||| |||||||||||||||| |||| |||| |||||    
T  10285367 tcataggctatcatagataacttaagaaaataagctgaaaacagcttatggacatgtcataacttgtctccat 10285439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 32821818 - 32821906
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| |  ||| ||||  ||||||| || ||| |||||||||||||||| |||||||||||| || | ||||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaa 32821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 1742127 - 1742005
Alignment:
Q  261 gaagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    ||||||||||| ||   |||||||||||||||  ||||||||| |||||||| |||  ||| ||||||||| | ||   |||||||| |||||| |||||    
T  1742127 gaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataag 1742028  T
Q  360 ttgtttccatcatctcttccaaa 382  Q
    |||||||||| | |||| |||||    
T  1742027 ttgtttccataagctctcccaaa 1742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 33525999 - 33525953
Alignment:
Q  323 gaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||    
T  33525999 gaaataagctgaaaccaacttatggacatgttataagttgtttccat 33525953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 4606938 - 4607006
Alignment:
Q  298 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 365  Q
    ||||||||||| ||||||||||| | ||||||||| ||||||||| ||| || |||| |||||||||||    
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttt 4607006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 11513874 - 11513958
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttat 345  Q
    |||||||| | || ||||||||| ||||||   ||||||||||||||||||||||||||  ||||||||||| |||  |||||||    
T  11513874 aagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttat 11513958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 36415734 - 36415663
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||||| |||||||| | ||||||| | ||| || |||||| ||||| |||||||||||||    
T  36415734 ttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatg-tataagttgtttc 36415663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 750680 - 750731
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    |||||||||||||| ||||||||||| | ||||||||| ||| |||||||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatg 750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 18066118 - 18066173
Alignment:
Q  276 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataag 330  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||||||| |||||||    
T  18066118 tcatataagctataagctgttttcataagctatcttggagaacttaagaaaataag 18066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 18179300 - 18179213
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||||||||||| ||||||||||| | ||||||||| |||  |||| ||||||||||  |||| ||||| ||| | | ||||||||    
T  18179300 tttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacacttccaaa 18179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 29316836 - 29316765
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||  | |||||| |||||| ||||| |||||    
T  29316836 ttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 388
Target Start/End: Original strand, 33256716 - 33256843
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| || ||||||||  |||||||| ||||||||||| ||| || ||| | || | ||||||||| | | ||| ||||| |||||| |||||     
T  33256716 aagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagc 33256815  T
Q  361 tgtttccatcatctcttccaaaaattct 388  Q
    ||||| ||| | |||| |||||||||||    
T  33256816 tgttttcataagctctcccaaaaattct 33256843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 43065511 - 43065440
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||| |||| |||||| ||||  |||||||||| ||| ||  |||||||||||| |||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttt 43065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 10563619 - 10563545
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    ||||||||||||||  || ||| |||||| ||||||||| |||  ||||||||||||||| ||| | ||||||||    
T  10563619 ttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcataggctgtttcca 10563545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 379
Target Start/End: Complemental strand, 17221634 - 17221516
Alignment:
Q  262 aagtcaaactattctcatataagatat-aagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||| | |||||||||||| ||| |||  |||||||||||||||   |||| |||| ||||||||||| |||  || ||||||| |||| |||||     
T  17221634 aagtcaaattgttctcatataagctattaagtgttttcataagctatccgagagatcttacggaaataagctaaaaaaagtttatggatatgtcataaga 17221535  T
Q  361 tgtttccatcatctcttcc 379  Q
    | ||||||| | |||||||    
T  17221534 tatttccataagctcttcc 17221516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 28039412 - 28039322
Alignment:
Q  276 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||  |||||||| |||||||||||| || |||| || ||| ||||||||||| ||| ||||||||| ||| || |||| ||||||    
T  28039412 tcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaacaagtcataacttgttt 28039322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 375
Target Start/End: Original strand, 680496 - 680593
Alignment:
Q  279 tataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctc 375  Q
    |||||| ||||||| |||||||||||||||| || |||||||  | ||||||||| ||| ||| ||||  |||||| ||||| ||||| ||| |||||    
T  680496 tataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataatctc 680593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 382
Target Start/End: Original strand, 5133764 - 5133869
Alignment:
Q  278 atataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 376  Q
    |||||||||||||||  |||||| ||| ||||   |||| |||| ||||||||||| |||| ||||||||  ||||| |||||||||||  || ||| ||    
T  5133764 atataagatataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataatccct 5133863  T
Q  377 tccaaa 382  Q
    ||||||    
T  5133864 tccaaa 5133869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 41042084 - 41042011
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||| || |||| ||||||  ||| ||||||||| | ||| ||||| |||||||||| ||||||||||||    
T  41042084 attttcatgagttatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttc 41042011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 43635159 - 43635090
Alignment:
Q  297 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||||||||| | | |||| | ||||||||||||| |||||||  ||||||| ||||||| ||||    
T  43635159 tcataagctatcatgaaaagcttatgaaaataagcttaaaacagcttacagacatgtcataagttttttc 43635090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 3102669 - 3102764
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttata 357  Q
    ||||||||||||| | ||||||  ||| |||  |||||||||  ||||||||||||||||   ||||| ||| ||| ||||||||||||||||||||    
T  3102669 aagtcaaactatttttatataatctattagctgttttcataatttatcatggagaacttacaaaaata-gctgaaatcagcttatggacatgttata 3102764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 13189432 - 13189372
Alignment:
Q  309 atggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||| |||| ||||||||||| |||| |  ||||||| ||||||||| ||||||||||    
T  13189432 atggagagcttatggaaataagctgaaagtaatttatggatatgttataaattgtttccat 13189372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 40279416 - 40279488
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 365  Q
    ||||||||||||||  ||||||||||| | ||||||| | ||| ||| |||||||| |||||| |||||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggacaatgttaaaagttgttt 40279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24935988 - 24936098
Alignment:
Q  1 ctgatatgccacttggaccggcacctactattccaattctggtgtttaatggcaaggaaggatgtagcttggagaattgctcctctattgatctttcagg 100  Q
    |||||| |||||||||||| ||||| |||||||||| ||| ||||||  |||||| ||||||||||||||||||||||| || |||||||||||||| |     
T  24935988 ctgataagccacttggaccagcaccaactattccaactcttgtgttttctggcaaagaaggatgtagcttggagaattggtcatctattgatctttctgt 24936087  T
Q  101 atccatctttt 111  Q
     ||||||||||    
T  24936088 gtccatctttt 24936098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 50800090 - 50800020
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||| ||||||||||||||||||||  ||||||||||| ||| |||||||| ||||||| |||||||||||    
T  50800090 ttttcttaagctatcatggagaacttt-ggaaataagctgaaaacagcttatagacatgtcataagttgttt 50800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 54325131 - 54325041
Alignment:
Q  262 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 351  Q
    |||||||||| || ||||||||| ||||||| ||||||| |||||||||||||||  ||| ||| |||| || ||| ||||||||||||||    
T  54325131 aagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatggacat 54325041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 53673719 - 53673644
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| |||||| |||| | ||||||||| ||| || ||||||||||| | ||| |||||||||||    
T  53673719 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgatatgttgtttccat 53673644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 488186 - 488116
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||||||| ||||||| ||| | ||||||| | ||| ||||||||| |||||| |||||||||||    
T  488186 tttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagttgttt 488116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 6364143 - 6364209
Alignment:
Q  280 ataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttat 345  Q
    ||||| |||||||| |||||||||||||| |||||||||||| | ||||||||| ||| ||||||||    
T  6364143 ataagctataagcaattttcataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 379
Target Start/End: Complemental strand, 4798627 - 4798542
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttcc 379  Q
    ||||||||||||||| |||||| |||| | ||||||||| ||| ||||||||| |||||| | |||  |||||||| | |||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcc 4798542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 6428032 - 6428109
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 376  Q
    ||||||||  ||| ||| |||| ||||||| ||||||| || ||||||||||||| ||||||||||| ||| ||||||    
T  6428032 ataagctactatgaagagcttatggaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctct 6428109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 32071907 - 32071952
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  32071907 aaataagcttaaaacagcttatggacgtgtcataagttgtttccat 32071952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 2996582 - 2996653
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| |||||| | || | ||||||| | |||  ||||||||||||||| |||||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttt 2996653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 21952962 - 21953045
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||||||| |  ||| ||||||||||||| || ||| ||| |||||||||||| ||||||| ||||||| | |||| |||||    
T  21952962 ataagctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaa 21953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 30631965 - 30632036
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||| |||||||||| ||  |||  ||||||||||||||| ||||||||| |||||  |||||||||||    
T  30631965 ttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttgttt 30632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 42121497 - 42121563
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 361  Q
    ||||||| ||||||| ||||||||||  ||||||||||| ||| ||||||||| |||||| |||||||    
T  42121497 ttttcatgagctatcttggagaacttgtggaaataagctgaaa-cagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 2874684 - 2874610
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||  ||||  |||| ||||||||||  |||  || |||||||||||| |||||||||||||||    
T  2874684 tttcataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccat 2874610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 382
Target Start/End: Original strand, 23819066 - 23819186
Alignment:
Q  263 agtcaaactattctcatataagatataagcat--tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||||| || ||||||||| ||||| |||  |||||||||||||| || ||| ||||  |||||||| | ||| || ||||||||||||| |||||     
T  23819066 agtcaaactgttttcatataagttataa-catgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagc 23819164  T
Q  361 tgtttccatcatctcttccaaa 382  Q
    ||||| | | | ||||||||||    
T  23819165 tgttttcttaaactcttccaaa 23819186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 25309550 - 25309620
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| |||||||||| | |||| ||||||||||||||| ||||||| ||| | ||  ||||||||||||||    
T  25309550 ataaactatcatggaaagcttatggaaataagcttaaaacagcttacggataagtcttaagttgtttccat 25309620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 53155239 - 53155340
Alignment:
Q  262 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||| ||||||| ||||||| | ||||| | |||||||||||||||||||   |||||  | ||||||||| ||||||  |||| ||||||| ||||||    
T  53155239 aagtcgaactattttcatatatgctataaactattttcataagctatcatg---aacttgtgaaaataagctgaaagcaatttatagacatgtcataagt 53155335  T
Q  361 tgttt 365  Q
    |||||    
T  53155336 tgttt 53155340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 27123407 - 27123338
Alignment:
Q  300 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||| ||||||| |||| ||||||||| | ||| || ||||  ||||||| |||||||||||||||    
T  27123407 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccat 27123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 42866077 - 42866134
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 351  Q
    ||||||||||||||| | |||| |||| |||| |||||| |||||| |||||||||||    
T  42866077 ttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacat 42866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 52754635 - 52754696
Alignment:
Q  321 aggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||| | ||||||||||    
T  52754635 aggaaataagctgaaagcagcttatggacacgtcataaactgttttcataagctcttccaaa 52754696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 8422797 - 8422765
Alignment:
Q  397 taagtgtttatgccagtaggtaaactcaaataa 429  Q
    ||||||||||||||||||| |||||||||||||    
T  8422797 taagtgtttatgccagtagttaaactcaaataa 8422765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 11264310 - 11264378
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttg 362  Q
    ||||||||||| ||| | |||| |||| ||||||||| | ||| ||| |||||||||||| ||||||||    
T  11264310 ttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttg 11264378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 14011247 - 14011307
Alignment:
Q  298 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    ||||||||||| |||||| |||| ||||||||||| ||| |||||||  ||||||| ||||    
T  14011247 cataagctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataa 14011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 17822926 - 17822874
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||  ||||||||    
T  17822926 ttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatg 17822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 19304557 - 19304629
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaa-taagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||| |||||||||||||||| ||||| |||| | |||  |||||||||| |||| ||||| ||||||    
T  19304557 tttcataagttatcatggagaacttatggaaattaagttgaaaagagcttatggaaatgtcataagctgtttc 19304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 19429723 - 19429771
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 347  Q
    |||||||||| |||||| |||| ||||||||||| ||| ||||||||||    
T  19429723 ataagctatcctggagagcttatggaaataagctgaaaacagcttatgg 19429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 27405823 - 27405895
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatca 371  Q
    ||||||||||||||| ||||||   ||||||||| |||  |||||| | | ||||||||||||||||| ||||    
T  27405823 ataagctatcatggaaaacttatataaataagctgaaaatagcttaagaaaatgttataagttgtttcgatca 27405895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 31006027 - 31006075
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagct 342  Q
    ||||||||||||||||| || |||||| ||||||||||| ||| |||||    
T  31006027 ttttcataagctatcatagataacttacggaaataagctgaaaacagct 31006075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 45128348 - 45128296
Alignment:
Q  317 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| ||||||||||| ||| ||||| ||||||||| ||| ||||||||||||    
T  45128348 cttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccat 45128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 37273143 - 37273231
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| ||||||||||| ||||||||| | ||| || ||||||||||||| ||||||||||||||| | |||| |||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaa 37273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 21574482 - 21574587
Alignment:
Q  277 catataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 376  Q
    |||||||| |||||   |||| |||||||| |||||||| |||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||| | ||||    
T  21574482 catataagctataactttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctct 21574581  T
Q  377 tccaaa 382  Q
     |||||    
T  21574582 cccaaa 21574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 43115065 - 43115153
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||| | ||||||| |||| |||| ||||||||||| ||| ||  |||||||||||| ||||||||||||||| | ||||||||||    
T  43115065 ttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaa 43115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 9279387 - 9279312
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||| |||||||| |||  ||||||||||||||| ||| ||||||||  |||||||||||| |||||||||    
T  9279387 ttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttatatacatgttataagctgtttccat 9279312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 31010411 - 31010483
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||| ||| ||||||| |||| |||| |||| |||||| ||| |||||||||||||||| ||||||||||||    
T  31010411 ttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttc 31010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 13804794 - 13804856
Alignment:
Q  302 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 364  Q
    ||||||| | ||||||||||| ||||||| | ||| |||||||||||||||| ||||||||||    
T  13804794 agctatcgttgagaacttaagaaaataagttgaaaacagcttatggacatgtcataagttgtt 13804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 11253492 - 11253581
Alignment:
Q  276 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||| |||||||  |||||||||||||| | |||| |||| ||||||| ||| ||| ||| |||| || |||| |||||||||||    
T  11253492 tcatataagctataagctgtttcataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgttt 11253581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 34254870 - 34254805
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    |||||||||||||||  ||||||||||| | ||||||||| |||| |||||||||| |||| ||||    
T  34254870 attttcataagctattctggagaacttatgtaaataagctgaaagtagcttatggatatgtcataa 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 366
Target Start/End: Original strand, 41452499 - 41452604
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| || |||||| || | |||||  ||||||||||||||| ||||||| ||  ||||||||| | ||| |||||||| ||||| | ||||||    
T  41452499 aagtcaaactgttttcatattagttgtaagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagt 41452598  T
Q  361 tgtttc 366  Q
    ||||||    
T  41452599 tgtttc 41452604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 1217861 - 1217773
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| | ||||||||| | || |||| | ||| || ||||||||||||| ||||| ||||||| | | ||||||||||    
T  1217861 ttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 1217773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 41644506 - 41644454
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| | |||| |||||||||||||||| ||| |||||||||    
T  41644506 ttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatg 41644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 54180841 - 54180769
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||| ||||||| ||||   ||||||||| ||| || ||||||||||||| ||||| ||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtttc 54180769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 2201104 - 2201211
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| || ||||||||| |||||||  ||||||| ||||||| |||| |  ||||||||| ||||| |||  || ||||| |||| | ||||||    
T  2201104 aagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaacatatcataagt 2201203  T
Q  361 tgtttcca 368  Q
    ||||||||    
T  2201204 tgtttcca 2201211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 22214720 - 22214661
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 353  Q
    ||||||||||||||| | ||||  ||| ||||||||||| ||| ||||||||||||||||    
T  22214720 ttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgt 22214661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 42537057 - 42537124
Alignment:
Q  302 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||||||| | ||||| ||||||  || ||| |||||| ||||||||| |||||||||||||||    
T  42537057 agctatcatggaaagcttaaagaaatagactgaaaacagcttgtggacatgtaataagttgtttccat 42537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 43875624 - 43875683
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaactta 320  Q
    |||||||||| |||||||||||| ||||||   |||||||||||||||||||||| ||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagctta 43875683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 49465726 - 49465655
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||  ||||||||||| |||||||||||||||  | || ||| |||||| ||||| |||||    
T  49465726 ttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttt 49465655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 51130759 - 51130818
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 353  Q
    |||||||||||||||||||||| ||   | ||||||||| |||||| |||||||||||||    
T  51130759 ttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgt 51130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 36200110 - 36200176
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||| || ||| || | ||||||||||| ||| || ||||||||||||| |||||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 41807172 - 41807230
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||| |||||||||||   |||||| ||||| ||||||||| ||||||||||||    
T  41807172 aaataagctaaaagcagcttacatacatgtcataagatgtttccataatctcttccaaa 41807230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 50952347 - 50952413
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||| ||||| |||||| |||| ||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 21367676 - 21367725
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagctt 343  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||| ||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 41724251 - 41724296
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagttgtttccat 41724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 43875477 - 43875546
Alignment:
Q  297 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||| ||||||||||| |||||||| |  ||| || ||||||||| | | ||||||||||||    
T  43875477 tcataagctatcctggagaacttatggaaataatcagaaaacaacttatggacgtatcataagttgtttc 43875546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 43948664 - 43948717
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 347  Q
    ||||||||||||||| |||| | ||| |||||||||||| ||| ||||||||||    
T  43948664 ttttcataagctatcttggaaagcttgaggaaataagctgaaaacagcttatgg 43948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 2719477 - 2719533
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 350  Q
    ||||||||||||||| ||||||||||| | ||||||||| | | || ||||||||||    
T  2719477 ttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 2719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 24887377 - 24887270
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| |  ||||||||| || ||||  ||||||||||||||| |||||| |||| || |||||||| ||| ||| |||  ||||||| |||| |    
T  24887377 aagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacag-ttaatgacatgtcataaat 24887279  T
Q  361 tgtttccat 369  Q
    |||||||||    
T  24887278 tgtttccat 24887270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 36646443 - 36646355
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| | ||||  |||  |||||||| | ||| |||||||||||||||  |||||| |||||||| | |||| |||||    
T  36646443 ttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaa 36646355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 44488892 - 44488956
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    ||||||||||||||| | ||||||||| ||||||||||| ||| | ||| |||| ||||| ||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaaccgctcatgggcatgtcataa 44488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 45541579 - 45541651
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||||||||| |||| |||||| |  ||||| || ||| ||||||||| |||||| ||||| |||||    
T  45541579 attttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttt 45541651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 48049043 - 48048975
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttg 362  Q
    ||||||| ||||||| ||| ||  ||| ||||||||||| ||| |||||||||||||||| || |||||    
T  48049043 ttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcatgagttg 48048975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 49546541 - 49546473
Alignment:
Q  298 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||||| ||||  |||||| ||| ||| || ||||| || ||||||| |||||||||    
T  49546541 cataagctatcatggagagcttattgaaatatgctgaaaacaacttatagaaatgttatgagttgtttc 49546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 40191379 - 40191305
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||| ||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||| |||||||||    
T  40191379 tttcataatctatcatggagaacttatggaaataatcttgaagcaacttatgaacatgttataagctgtttccat 40191305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 27626183 - 27626109
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| |||||||||||| ||| |||| ||||||||| ||||| ||| |||||||||||| ||||| |||||||||    
T  27626183 tttcctaagctatcatgaagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccat 27626109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 38010704 - 38010794
Alignment:
Q  276 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||| |||||||  ||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||| |||||||||  |||||||    
T  38010704 tcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttt 38010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 3468589 - 3468697
Alignment:
Q  261 gaagtcaaactattctcatataagatataagcatttt-cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||||||||||||| || |||||| ||||||| |||| ||||| ||||| | ||||||||  ||||||||| |  || || ||||||||||||| || ||    
T  3468589 gaagtcaaactattttcgtataagttataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattag 3468688  T
Q  360 ttgtttcca 368  Q
    |||||||||    
T  3468689 ttgtttcca 3468697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 39334202 - 39334290
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||| |||||||| ||| || |||| ||||||||||| || ||| ||||||||||||| |||| |||||||||| | |||| |||||    
T  39334202 ttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaa 39334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 45078287 - 45078359
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||| ||| |||||  ||||||||| | ||| |||||||||||||||| ||||||| ||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttc 45078359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 33646021 - 33645947
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| || ||||| ||||||| |||||||||||||||    
T  33646021 ttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccat 33645947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 39360032 - 39360107
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||| |||||||| ||| || ||||  |||||||||| |||||| |||||||| |||| |||||||||||||||    
T  39360032 ttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccat 39360107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 24967100 - 24967158
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||| ||| || ||| |||| |||||||||||||||||||| ||||||||||||    
T  24967100 aaataagctgaaaacaacttctggatatgttataagttgtttccataatctcttccaaa 24967158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 7244689 - 7244777
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||  |||||| |||| | ||||||||| ||| || ||||||  ||||| |||| |||||||||||| ||||| ||||    
T  7244689 ttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaa 7244777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 18749878 - 18749806
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||| ||| |||||| ||||||||||| ||| | ||||||| ||||||  |||| ||||||    
T  18749878 ttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcgtaagctgtttc 18749806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 39280983 - 39281043
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||||||||| |||||||| || ||||||||||| ||| || ||||||||||| |||||||    
T  39280983 ataagctatcttggagaacatatggaaataagctgaaaacaacttatggacatattataag 39281043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 39345480 - 39345568
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||| |||||||| ||  || |||| ||||||||||| |||||| ||||||||||||| ||||  ||||||||| | |||| |||||    
T  39345480 ttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccatgaactctaccaaa 39345568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 48157181 - 48157109
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||| |||||||   ||||| |||| ||||||||||| ||| |||||||||||||||  ||||||||||||    
T  48157181 ttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttc 48157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 366
Target Start/End: Complemental strand, 12234964 - 12234878
Alignment:
Q  279 tataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||| |||||| ||||| || |||| || | |||| |||| ||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  12234964 tataagttataag-atttttatgagctttcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttc 12234878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 24363662 - 24363603
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 353  Q
    ||||||||||||||| ||||||  ||| ||||||||||| ||| || |||||||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 27481395 - 27481320
Alignment:
Q  255 taaaccgaagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataa 329  Q
    |||| |||||||||||| ||  |||||||| ||||||  ||||||||||||||||||||| | |||| ||||||||    
T  27481395 taaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Complemental strand, 39539812 - 39539769
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagttgtttcc 39539769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 24363564 - 24363511
Alignment:
Q  397 taagtgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaa 450  Q
    |||||| |||||| ||||| |||||||||||||| ||| | |||||||||||||    
T  24363564 taagtgcttatgctagtagataaactcaaataaaacaatccaaacaggtcctaa 24363511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 40689080 - 40688995
Alignment:
Q  262 aagtcaaactattctcatataagatataagcatt-ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    |||| ||| |||| ||||||||| |||||||  | ||||||||||||| |||| |||||| | ||||||||| ||| |||||||||    
T  40689080 aagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 12834992 - 12834936
Alignment:
Q  325 aataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaa 381  Q
    |||||||| ||| ||| |||||||||||| ||||| ||||||||| |||||| ||||    
T  12834992 aataagctgaaaacagtttatggacatgtcataagctgtttccataatctctaccaa 12834936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 29290365 - 29290417
Alignment:
Q  317 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| ||||||| | | ||| |||||||||||||||| |||||||||||||||    
T  29290365 cttacggaaatatgttgaaaacagcttatggacatgtcataagttgtttccat 29290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 30812157 - 30812197
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagctta 334  Q
    ||||||| |||||||||||||| |||| |||||||||||||    
T  30812157 ttttcattagctatcatggagagcttatggaaataagctta 30812197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 39551586 - 39551534
Alignment:
Q  317 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| ||||||||||| | | || ||||||||||||| |||||||||||||||    
T  39551586 cttatggaaataagctgacaacaccttatggacatgtcataagttgtttccat 39551534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 39908088 - 39907992
Alignment:
Q  262 aagtcaaactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    ||||||||  ||| ||||||||| |||||||  || |||||||||   |||||| |||  ||||||||| | ||| |||||||||||||||| ||||    
T  39908088 aagtcaaataattatcatataagctataagctgttccataagctaaattggagagcttgtggaaataagatgaaaccagcttatggacatgtcataa 39907992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 32172644 - 32172750
Alignment:
Q  277 catataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctc 375  Q
    |||||||| |||||||  |||||||||||||||||| |||||| | ||||||||||| |||   |||||||||||||| ||||||||||||||| | |||    
T  32172644 catataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctc 32172743  T
Q  376 ttccaaa 382  Q
    | |||||    
T  32172744 tcccaaa 32172750  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 4619718 - 4619804
Alignment:
Q  296 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||||||||||||| ||||||||| | ||| ||||||||| |||||| || |||||||| ||| | |||| |||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaa 4619804  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 40205135 - 40205064
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| |||||| ||||  |||||||||| ||| ||| |||||||||||||||||| |||||    
T  40205135 ttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 41957512 - 41957424
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| | ||||||||| | ||||||| | ||| || ||||||||||||| ||||| ||||||| | | ||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 41957424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 37611276 - 37611205
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| ||||||||| |||||| | |||||||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttt 37611205  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 37788006 - 37787935
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| ||||||||| |||||| | |||||||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttt 37787935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 31723814 - 31723872
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 352  Q
    ||||||||| ||||| |||||| |||| ||||| ||||||||| |||||||||||||||    
T  31723814 ttttcataaactatcttggagaccttacggaaaaaagcttaaaacagcttatggacatg 31723872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 366
Target Start/End: Complemental strand, 18704130 - 18704025
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||| ||||| | ||||||| ||||||   |||||||||||||| |   ||| |||| ||||||||||| ||| || ||||| ||||||||||||||    
T  18704130 aagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgttataagt 18704031  T
Q  361 tgtttc 366  Q
    ||||||    
T  18704030 tgtttc 18704025  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 369
Target Start/End: Complemental strand, 36542373 - 36542268
Alignment:
Q  265 tcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 363  Q
    ||||||| |||||||||||| |||||||   ||| |||||||||| | |||| |||  ||||||||| | ||| |||||| ||||||||| ||||| |||    
T  36542373 tcaaactgttctcatataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgt 36542274  T
Q  364 ttccat 369  Q
    ||||||    
T  36542273 ttccat 36542268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 4014485 - 4014433
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||| |||||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 36774768 - 36774680
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||| |||||||||| |||||| |||| ||||||||||| ||| || |||  |||||||| |||||  |||||||| | ||||||||||    
T  36774768 tttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataagccgtttccataagctcttccaaa 36774680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 7674657 - 7674732
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| ||||||| ||  | ||||||||| ||| || |||||  |||||| |||||||||||||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccat 7674732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 17368685 - 17368756
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| ||||||  ||| ||||||||||| ||| | || |||| |||||| |||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 359
Target Start/End: Complemental strand, 32408682 - 32408588
Alignment:
Q  266 caaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||| |||| ||||||||| ||||| | |||||||||||||||| || ||| |||| ||||||||||  ||| || |||| |||||||| |||||    
T  32408682 caaattattttcatataagctataaactattttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcataag 32408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 369
Target Start/End: Original strand, 35960423 - 35960497
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||||||||| |||| | | ||| |||||||||| ||| || |||||||||||||  ||||||| ||||||    
T  35960423 tttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccat 35960497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 11700409 - 11700364
Alignment:
Q  324 aaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||| || ||| |||||||||||||||| |||||||||||||||    
T  11700409 aaataatctgaaaacagcttatggacatgtcataagttgtttccat 11700364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 30217092 - 30217149
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 352  Q
    |||||||||||||| |||||| |||| |||||||| | |||| || ||||||||||||    
T  30217092 tttcataagctatcctggagagcttatggaaataaacctaaaacaacttatggacatg 30217149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 7319069 - 7319013
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 350  Q
    ||||||||||||||| ||||||||||| | ||||||||| | | || ||||||||||    
T  7319069 ttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 7319013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 7984978 - 7985030
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| ||||||| ||| | ||||||||| ||| |||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 10125780 - 10125708
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||| || |||||||| |||| | ||||||||| ||| || |||||  |||||| |||||||||||    
T  10125780 attttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 11457151 - 11457191
Alignment:
Q  338 cagcttatggacatgttataagttgtttccatcatctcttc 378  Q
    |||||||||||||||| ||||||||||||||| | ||||||    
T  11457151 cagcttatggacatgtcataagttgtttccataagctcttc 11457191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 39105473 - 39105525
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||  ||||||||    
T  39105473 ttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatg 39105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 25869328 - 25869252
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||| |||||||||||||  ||| ||||||||||| ||| || ||||||||||||| ||||||| |||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttccat 25869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 10075645 - 10075563
Alignment:
Q  262 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagctt 343  Q
    ||||||||||||| | ||||||| ||||||| |||||||||||||||| | |||| |||| | ||||||||| ||||||||||    
T  10075645 aagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaataagctaaaagcagctt 10075563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 262 - 359
Target Start/End: Original strand, 11795068 - 11795166
Alignment:
Q  262 aagtcaaactattctcatataagatataagcat-tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||||| ||| || ||||||||| |||||||   ||||||||||||| ||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||    
T  11795068 aagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 4055677 - 4055605
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||   |||| |||||||||||||||| ||| ||| |||||||||||| ||||||| ||||    
T  4055677 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 4055605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 11183521 - 11183625
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| | ||||||| || |||||||  |||||| |||||| | |||||| |||| ||||||||||| ||| |||||||| ||||| | ||||||    
T  11183521 aagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagt 11183620  T
Q  361 tgttt 365  Q
    |||||    
T  11183621 tgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 28769433 - 28769343
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 351  Q
    ||||||||||||| || |||||| |||||||  ||||||||||||||  ||||||  ||| ||||||||||| ||| || |||||||||||    
T  28769433 aagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacat 28769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 36643955 - 36643881
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    ||||||||||||||||||||||||| || ||||||||||| |||  || ||| | || ||| |||||||||||||    
T  36643955 attttcataagctatcatggagaacgtatggaaataagctgaaaatagtttacgaacgtgtgataagttgtttcc 36643881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 39866790 - 39866721
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    |||||||||| || ||| |||| | |||||| || ||| ||||||||||||||| |||||||||||||||    
T  39866790 ataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgtttcca 39866721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 43504760 - 43504837
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatca 371  Q
    |||| |||||||||| ||||||||||| ||||||||||| ||| ||||||||  ||| ||  |||||||||| |||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatca 43504837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 33553249 - 33553337
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    ||||||||||||||| || ||| |||| |||||||||||   | ||||||| |||||||| |||||||| ||| || | ||||||||||    
T  33553249 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 33553337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 5088861 - 5088936
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||| |||| ||| |||||| ||||  |||||||| | ||| |||||||||||||||||||||  |||||||||    
T  5088861 ttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccat 5088936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 11569518 - 11569443
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||||||||||  ||  | ||||||||| ||| || |||||| |||||| ||||| |||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccat 11569443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 39551270 - 39551195
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||||||| || |||||| ||||   ||||||| | ||| |||||| ||||||||| |||||||||||||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccat 39551195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 11185238 - 11185304
Alignment:
Q  302 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    |||||||||||||| || | ||||||||| | ||| || |||||| |||||||||||| ||||||||    
T  11185238 agctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgtttcca 11185304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 31862469 - 31862575
Alignment:
Q  262 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||||||||| |||||| ||||||   |||||||||| |||| | |||| |||| | ||||||||| ||| ||||||||| | | || ||||||    
T  31862469 aagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagt 31862568  T
Q  361 tgtttcc 367  Q
    || ||||    
T  31862569 tgcttcc 31862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 11494154 - 11494207
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    |||||||||||||||| || ||| |||| | ||||||||| |||||||||||||    
T  11494154 attttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatg 11494207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 43704414 - 43704365
Alignment:
Q  317 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||| ||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  43704414 cttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttc 43704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 11415130 - 11415238
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||| |||| | ||||||| |||| ||  ||||||||||||||| | ||||  ||  | ||||||||| | |  |||||||||||||||||||||     
T  11415130 aagtcaaattatttttatataagttatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagc 11415229  T
Q  361 tgtttccat 369  Q
    |||||||||    
T  11415230 tgtttccat 11415238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 29973160 - 29973236
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagc-agcttatggacatgttataagttgtttccat 369  Q
    |||||| |||||||| | ||||| ||| |||||||| || ||| | ||||| |||||||||| ||||||||||||||    
T  29973160 ttttcacaagctatccttgagaatttatggaaataaactgaaaaccagcttttggacatgttgtaagttgtttccat 29973236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 30013194 - 30013302
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| ||  |||||||| |||||||  ||||||||||||||| || |||||| | ||||||||||| |||  || ||| |||||  | |||||     
T  30013194 aagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggacacttgataaga 30013293  T
Q  361 tgtttccat 369  Q
    |||||||||    
T  30013294 tgtttccat 30013302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 31884603 - 31884673
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||||||||||||||||  ||||  ||||||||| ||| ||| |||||  ||||||||||||||||||    
T  31884603 ttttcataagctatcatggagagtttaa-taaataagctgaaaacag-ttatgatcatgttataagttgtttc 31884673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 42215144 - 42215084
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 353  Q
    |||||||||||||||| |||||| |||| | ||||||||| ||| || |||||| ||||||    
T  42215144 attttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 2034507 - 2034432
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||| |||| ||| ||||| |||||||||| ||| ||||||||||| |||| ||||| |||||||||    
T  2034507 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagctgtttccat 2034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 4324514 - 4324443
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||| |||| |||||| | ||||||||| ||||||| ||| |||||||| |||||||||||    
T  4324514 ttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgttt 4324443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 2455818 - 2455903
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttc 378  Q
    |||||||||||||||| |||||| |||| ||||||||| | |||  || |||||| ||||| ||||||||||||||| | ||||||    
T  2455818 attttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctcttc 2455903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 4420651 - 4420724
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||| ||||||||| |||||| |||| ||||||||||| ||| ||||||||| |||||| |||| |||||||    
T  4420651 attttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttc 4420724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 28088283 - 28088209
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||||||||||||||||| || | ||||||||||| ||| || | ||| |||||| ||||||||||||||||    
T  28088283 ttttcataagctatcatggagagctcatggaaataagctcaaaacaacctatagacatg-tataagttgtttccat 28088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 363
Target Start/End: Original strand, 3155152 - 3155253
Alignment:
Q  262 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||| ||  |||||||  ||||||| ||||||||||| |||| |||||| || | ||||||||||| ||| |||||||| ||||||| ||||||    
T  3155152 aagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct-atggaaataagctgaaaacagcttatagacatgtcataagt 3155250  T
Q  361 tgt 363  Q
    |||    
T  3155251 tgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 359
Target Start/End: Complemental strand, 3168343 - 3168257
Alignment:
Q  274 tctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    ||||||||||| ||||| |  ||||| ||||||||| |||||| |||||||||||||||| ||| ||||  |||||||||| |||||    
T  3168343 tctcatataagctataaactgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 2027500 - 2027396
Alignment:
Q  262 aagtcaaactattctcatataagatataagcattt-tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||||||||| ||||||||  |||||||  || |||||||||| |||| |||  ||||  ||||||||| ||| ||||||||||| |||| |||||     
T  2027500 aagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagcttatggaaatgtcataagc 2027401  T
Q  361 tgttt 365  Q
    |||||    
T  2027400 tgttt 2027396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 2027839 - 2027787
Alignment:
Q  314 gaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||||||||||||| || |||| |||| ||||||| ||||||||||||    
T  2027839 gaacttaaggaaataagctaaaggcagtttattgacatgtcataagttgtttc 2027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 6014511 - 6014619
Alignment:
Q  262 aagtcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||| |||||||||||| || ||||| |  |||| ||||| |||| || ||||| || |||||||| || ||| ||||||||| || ||| ||||||    
T  6014511 aagtcaacctattctcatattagttataaactgtttccataagttatcttgaagaacctatggaaataatctcaaaacagcttatgcacctgtcataagt 6014610  T
Q  361 tgtttccat 369  Q
    |||||||||    
T  6014611 tgtttccat 6014619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 9668029 - 9667973
Alignment:
Q  311 ggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    ||||| |||| ||||||||| | ||| |||||||||||||||| |||||||||||||    
T  9668029 ggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttcc 9667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 382
Target Start/End: Complemental strand, 281928 - 281821
Alignment:
Q  276 tcatataagatataagcatt-ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatct 374  Q
    ||||||||| |||||||  | ||||||||||||| | |||| || | ||||||||||| ||| || ||||| ||||||| |||||||| |||||| | ||    
T  281928 tcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagct 281829  T
Q  375 cttccaaa 382  Q
    || |||||    
T  281828 ctcccaaa 281821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 20368241 - 20368170
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||||| || ||||||||||| | ||||||| | |||  |||||||| |||||| |||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttt 20368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 34939755 - 34939826
Alignment:
Q  296 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    ||||||||||||| ||||||  ||| ||||||||||| ||| ||  |||||||||||| ||||| |||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttcc 34939826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 1019643 - 1019597
Alignment:
Q  322 ggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    ||||||||||| ||| || ||||| ||||||||||||||||||||||    
T  1019643 ggaaataagctaaaaacaacttatagacatgttataagttgtttcca 1019597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 365
Target Start/End: Original strand, 3528777 - 3528883
Alignment:
Q  260 cgaagtcaaactattctcatataagatata-agcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    |||||||||||| |||||||||||  |||| | | ||||||| | ||||| |||||| |||| | ||||||| | ||| ||  |||||||||||| ||||    
T  3528777 cgaagtcaaacttttctcatataaattatagaccgttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataa 3528876  T
Q  359 gttgttt 365  Q
    |||||||    
T  3528877 gttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 4246419 - 4246493
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    |||||||||||||| ||||||| | ||   ||||||| | ||| |||||||||||||||| || |||||||||||    
T  4246419 ttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttcca 4246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 33301697 - 33301787
Alignment:
Q  277 catataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    |||| ||| ||||||| |||||||| ||||||||||  | |||||| ||||||||| ||| ||||||| | ||| |  |||||||||||||    
T  33301697 catacaagctataagctttttcatatgctatcatgggtagcttaagcaaataagctgaaaacagcttaagaacacgacataagttgtttcc 33301787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 366
Target Start/End: Original strand, 2117379 - 2117484
Alignment:
Q  262 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    ||||||||||||| ||||||||  ||||||   |||||||||| |||| | |||| ||||  |||||||||| ||| |||||||| ||||||  |||| |    
T  2117379 aagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacatgccataaat 2117478  T
Q  361 tgtttc 366  Q
    ||||||    
T  2117479 tgtttc 2117484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 2460206 - 2460137
Alignment:
Q  300 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||| ||||||| |||| ||||||||| | ||| || ||||  ||||||| |||||||||||||||    
T  2460206 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccat 2460137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 3738107 - 3738152
Alignment:
Q  323 gaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    |||||||| | |||||||||||||||||||| ||||| ||||||||    
T  3738107 gaaataagttgaaagcagcttatggacatgtcataagctgtttcca 3738152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 382
Target Start/End: Complemental strand, 10616635 - 10616514
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||| | || |||||||| ||||||||  |||| |||||||||  |||||| ||||   ||||||||| ||  || |||| |||||||| ||||||    
T  10616635 aagtcaaagttttttcatataaaatataagccgttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagt 10616536  T
Q  361 tgtttccatcatctcttccaaa 382  Q
    ||||||||| | |||| |||||    
T  10616535 tgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 30523650 - 30523743
Alignment:
Q  276 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||| ||||||  ||||||||||||||| | ||||  |||  ||||| || | ||| ||||||||| |||||  |||||||||||||||    
T  30523650 tcatataagctataagttttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccat 30523743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 30523948 - 30524017
Alignment:
Q  296 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||| |  ||| |||| ||||||||||| |||||| || |||||||||| |||| ||||||    
T  30523948 ttcataagctatcctaaagagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttt 30524017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 19275697 - 19275633
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    |||||||||||||||||| ||| |||| |||||||| |  ||| |||||| ||||||||| ||||    
T  19275697 ttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 27140487 - 27140560
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    |||| ||||||||||||||||| |||| | ||||||||| ||| || ||||||||||||| ||||| |||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttcc 27140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 359
Target Start/End: Original strand, 44422678 - 44422773
Alignment:
Q  265 tcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    ||||||| || ||||||||| ||||||| ||||| |||||||||| |||||| |||| | |||||||||  |  |||||||||||||||| |||||    
T  44422678 tcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataag 44422773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 382
Target Start/End: Original strand, 4622072 - 4622190
Alignment:
Q  265 tcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 363  Q
    ||||||| || ||||||||| |||||||  |||| ||| |||||| |||||| |||  | ||||||||| ||| |||||||||||||||| ||||| |||    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgt 4622171  T
Q  364 ttccatcatctcttccaaa 382  Q
    | |||| |  |||||||||    
T  4622172 tcccattagatcttccaaa 4622190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 382
Target Start/End: Original strand, 10439661 - 10439783
Alignment:
Q  261 gaagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    ||||||||| |||| ||||||||| ||| ||| || |||| || ||||| ||||||  ||| ||||||||||| ||||||| |||||||||||| |||      
T  10439661 gaagtcaaattattttcatataagctatcagctatattcaaaaactatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagt 10439760  T
Q  360 ttgtttccatcatctcttccaaa 382  Q
    |||||| ||| | |||| |||||    
T  10439761 ttgttttcataagctctcccaaa 10439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 12477381 - 12477283
Alignment:
Q  262 aagtcaaactattctcatataagatataagcattttca-taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||||||||| || |||| ||||||||| || |||| | ||||||||||||||||   || ||||||||||| ||| || ||||||||||||| |||||    
T  12477381 aagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 35080130 - 35080060
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 364  Q
    ||||||| |||||||||||||| |||   |||||||||| ||| ||||||||| |||||| ||||||||||    
T  35080130 ttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttgtt 35080060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 12564560 - 12564495
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| ||| ||| |||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataag 12564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 39777672 - 39777741
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 363  Q
    ||||| |||| ||| ||| ||| |||||||||||||||| ||| || |||||||||||||||||| ||||    
T  39777672 ttttcttaagttataatgaagagcttaaggaaataagctaaaaacatcttatggacatgttataaattgt 39777741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 4699677 - 4699605
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||||| |||||  ||||| ||||  |||||||||| ||| ||||||||| |||||| |||||||||||    
T  4699677 attttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttt 4699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 17778957 - 17779037
Alignment:
Q  286 tataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    |||||||| ||||||||||||||| ||||||| ||  ||||||||| | ||| ||| ||||| ||| ||||||||||||||    
T  17778957 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgttt 17779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 19412635 - 19412583
Alignment:
Q  317 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||| ||||||||||  ||| |||||||||||||||| |||||||||||||||    
T  19412635 cttatggaaataagccaaaatcagcttatggacatgtcataagttgtttccat 19412583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 30014139 - 30014067
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    ||||||||||||||  | ||||||||| ||||||||||| ||| | |||  ||||||||| ||||||||||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaaccgctattggacatgtcataagttgtttc 30014067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 2294905 - 2294976
Alignment:
Q  280 ataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 350  Q
    ||||| ||||||| |||||||||| ||||| ||||||||||| | ||||||| | ||| |||||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatggaca 2294976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 4548730 - 4548805
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| |||||| ||| || ||||||||| ||| || ||||  | ||||| |||||||||||||||    
T  4548730 ttttcataagctatcttggagagcttcagaaaataagctaaaaacaacttacaggcatgtcataagttgtttccat 4548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 6231877 - 6231802
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||| ||||||| | || ||||||||  |||||||||| ||| ||| |||||||||||| || ||||||||||||    
T  6231877 ttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccat 6231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 15437972 - 15438047
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||| |||||| | ||||  ||| ||||||||||| |||| | |||||| |||||| |||||||||||||||    
T  15437972 ttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttccat 15438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 15581292 - 15581351
Alignment:
Q  323 gaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 382  Q
    |||||| ||| ||| |||||||| ||||||| ||||||||||||||| | ||||||||||    
T  15581292 gaaataggctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaa 15581351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 17628636 - 17628683
Alignment:
Q  322 ggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||| ||| ||| |||||||||||||||| |||||||||||||||    
T  17628636 ggaaatatgctgaaaacagcttatggacatgtcataagttgtttccat 17628683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 26184759 - 26184830
Alignment:
Q  296 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    |||||||  |||| |||||| |||| |||||||| || ||| |||||||||||||||| ||||| |||||||    
T  26184759 ttcataaattatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgtttcc 26184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 28262680 - 28262613
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 361  Q
    |||||||||| |||| |  |||||||| ||||||||||| ||| ||  ||||||||||||||||||||    
T  28262680 ttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacatgttataagtt 28262613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 35925703 - 35925770
Alignment:
Q  298 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 365  Q
    ||||||||||||||||||  ||| ||||||||| | ||| ||||||||| |||||| ||||| |||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 39270519 - 39270428
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 352  Q
    ||||||||| ||  |||||||||||||||||  ||||||||||||| ||| |||| | || | ||||||| | ||| |||||||||||||||    
T  39270519 aagtcaaacaatcttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatg 39270428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 11211108 - 11211194
Alignment:
Q  276 tcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 361  Q
    |||||||||||| || | ||||||||||||| | |||||||  ||| ||||||||| | ||| || |||||||||||| ||||||||    
T  11211108 tcatataagataaaaactattttcataagctgttatggagagtttatggaaataagttaaaaacaacttatggacatgctataagtt 11211194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 14630044 - 14629970
Alignment:
Q  278 atataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 351  Q
    ||||||| ||||||| |||||||||||||||| ||||||  ||| ||||||||||| ||| || |||||| ||||    
T  14630044 atataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacat 14629970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 15942827 - 15942737
Alignment:
Q  276 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagca-gcttatggacatgttataagttgttt 365  Q
    ||||||| |||||||   |||||||||  |||| |||||||||||  |||||||||| ||| || ||||||| |||||| |||||||||||    
T  15942827 tcatatatgatataactgttttcataatttatcttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttt 15942737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 16322826 - 16322940
Alignment:
Q  263 agtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 361  Q
    |||||||||||| ||||| ||| |||||||  |||||||| |||||  || ||| |||| ||||||||||| ||| || ||||||  ||||  |||||||    
T  16322826 agtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatgtgcatgacataagtt 16322925  T
Q  362 gtttccatcatctct 376  Q
    ||||| || ||||||    
T  16322926 gtttcgataatctct 16322940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 27963431 - 27963361
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 364  Q
    |||||||||||||| ||||||| ||||   ||||||||| ||| || ||||||||||||| ||||| ||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtt 27963361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 47960715 - 47960629
Alignment:
Q  265 tcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagc-ttaaagcagcttatggac 349  Q
    |||||||||| ||||||||| |||||||  |||||||||| |||| || ||| ||| ||||||||||| | ||| ||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagcttgaggaaataagcataaaaacagcttatggac 47960629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 16981994 - 16981933
Alignment:
Q  297 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 358  Q
    ||||||||||||||||||| ||||   ||||||||| ||| || ||||||||||||| ||||    
T  16981994 tcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 35179148 - 35179201
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 347  Q
    |||||||||| ||| |||||||||||| | ||||||||| ||| ||||||||||    
T  35179148 ttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 35590952 - 35590915
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagct 332  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagct 35590915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 43338123 - 43338200
Alignment:
Q  292 cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| |||||||| |||| | ||||| ||| |||  || ||||| |||||| ||||| |||||||||    
T  43338123 cattttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgtttccat 43338200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 52190138 - 52190203
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 359  Q
    |||||||||||||||||||||| |||| | ||||||||| ||| | |||| ||||| ||| |||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataag 52190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 2522703 - 2522739
Alignment:
Q  398 aagtgtttatgccagtaggtaaactcaaataaatcaa 434  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  2522703 aagtgtttatgccagtagataaactcaaataagtcaa 2522739  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 4078242 - 4078162
Alignment:
Q  263 agtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagct 342  Q
    |||||||||||| ||||||||  ||||||   ||||||||||||||||||| || || | | ||||||||| |||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaataagctgaaagcagct 4078162  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 5047155 - 5047207
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||| |||| ||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatg 5047207  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 382
Target Start/End: Original strand, 6262715 - 6262835
Alignment:
Q  262 aagtcaaactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 361  Q
    ||||||||||||| | ||||||| ||||||| |||| || |||| | || ||||  | |  |||||||||||||| || ||||||||||| | |||||||    
T  6262715 aagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatatcataagtt 6262814  T
Q  362 gtttccatcatctcttccaaa 382  Q
     ||| ||| | |||| |||||    
T  6262815 attttcataagctctcccaaa 6262835  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 6279407 - 6279467
Alignment:
Q  293 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 353  Q
    |||||||||||||||| | |||| |||| ||||||| ||| ||| || |||||||||||||    
T  6279407 attttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 15579497 - 15579565
Alignment:
Q  300 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 368  Q
    ||||||||||||  ||  ||| ||||||||||| | | || ||||||||||||| ||||||||||||||    
T  15579497 taagctatcatgttgagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttcca 15579565  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 28689508 - 28689440
Alignment:
Q  299 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 367  Q
    |||||||||| |||| | |||| | ||||||||| ||| || ||||||||||||| ||||| |||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttcc 28689440  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 29834966 - 29834894
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 366  Q
    |||||||||||||||||| ||| |||| ||||||||  | |||  |||||||||||| ||  |||||||||||    
T  29834966 ttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgtttc 29834894  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 37593744 - 37593676
Alignment:
Q  295 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 363  Q
    |||||||||||||  || ||| |||| | ||||||||| ||| ||||||||| |||||| |||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 45205044 - 45205148
Alignment:
Q  262 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 360  Q
    |||||||||||||  |||||||| || |||   |||||||||||||||||| |||  | | ||||||||||| ||| || |||| |||||| | ||||||    
T  45205044 aagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatcataagt 45205143  T
Q  361 tgttt 365  Q
    |||||    
T  45205144 tgttt 45205148  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 45975699 - 45975751
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 346  Q
    ||||||||||||||| ||||||| ||| | ||||||||| ||| |||||||||    
T  45975699 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 51695556 - 51695484
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 365  Q
    ||||||||||||||| ||||||| ||| | ||||||||| |||  |||||||| || |||| |||||||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgttt 51695484  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 306335 - 306410
Alignment:
Q  294 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    ||||||||||||||| | |||| |||| | || |||||| ||| |||||||||| ||||| ||||| |||||||||    
T  306335 ttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccat 306410  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 12758 - 12690
Alignment:
Q  301 aagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 369  Q
    |||||||| | |||| |||| |||  |||||| ||| || ||||||||||||| |||||||||||||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccat 12690  T

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