View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21318_low_1 (Length: 615)

Name: NF21318_low_1
Description: NF21318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21318_low_1
NF21318_low_1
[»] chr2 (31 HSPs)
chr2 (69-601)||(42131421-42131932)
chr2 (1-77)||(42131302-42131378)
chr2 (295-367)||(34652025-34652097)
chr2 (263-362)||(10285836-10285936)
chr2 (295-383)||(15120192-15120280)
chr2 (267-370)||(43205289-43205393)
chr2 (295-365)||(1939323-1939393)
chr2 (277-366)||(22681175-22681265)
chr2 (298-370)||(10285367-10285439)
chr2 (295-383)||(32821818-32821906)
chr2 (262-383)||(1742005-1742127)
chr2 (324-370)||(33525953-33525999)
chr2 (299-366)||(4606938-4607006)
chr2 (263-346)||(11513874-11513958)
chr2 (295-367)||(36415663-36415734)
chr2 (296-347)||(750680-750731)
chr2 (277-331)||(18066118-18066173)
chr2 (296-383)||(18179213-18179300)
chr2 (295-366)||(29316765-29316836)
chr2 (263-389)||(33256716-33256843)
chr2 (295-366)||(43065440-43065511)
chr2 (295-369)||(10563545-10563619)
chr2 (263-380)||(17221516-17221634)
chr2 (277-366)||(28039322-28039412)
chr2 (280-376)||(680496-680593)
chr2 (279-383)||(5133764-5133869)
chr2 (294-367)||(41042011-41042084)
chr2 (298-367)||(43635090-43635159)
chr2 (263-358)||(3102669-3102764)
chr2 (310-370)||(13189372-13189432)
chr2 (295-366)||(40279416-40279488)
[»] chr3 (32 HSPs)
chr3 (295-383)||(37273143-37273231)
chr3 (278-383)||(21574482-21574587)
chr3 (295-383)||(43115065-43115153)
chr3 (295-370)||(9279312-9279387)
chr3 (295-367)||(31010411-31010483)
chr3 (303-365)||(13804794-13804856)
chr3 (277-366)||(11253492-11253581)
chr3 (294-359)||(34254805-34254870)
chr3 (263-367)||(41452499-41452604)
chr3 (295-383)||(1217773-1217861)
chr3 (295-347)||(41644454-41644506)
chr3 (295-367)||(54180769-54180841)
chr3 (263-369)||(2201104-2201211)
chr3 (295-354)||(22214661-22214720)
chr3 (303-370)||(42537057-42537124)
chr3 (263-321)||(43875624-43875683)
chr3 (295-366)||(49465655-49465726)
chr3 (295-354)||(51130759-51130818)
chr3 (300-366)||(36200110-36200176)
chr3 (325-383)||(41807172-41807230)
chr3 (300-366)||(50952347-50952413)
chr3 (295-344)||(21367676-21367725)
chr3 (325-370)||(41724251-41724296)
chr3 (298-367)||(43875477-43875546)
chr3 (295-348)||(43948664-43948717)
chr3 (295-351)||(2719477-2719533)
chr3 (263-370)||(24887270-24887377)
chr3 (295-383)||(36646355-36646443)
chr3 (295-359)||(44488892-44488956)
chr3 (294-366)||(45541579-45541651)
chr3 (295-363)||(48048975-48049043)
chr3 (299-367)||(49546473-49546541)
[»] chr7 (25 HSPs)
chr7 (296-370)||(40191305-40191379)
chr7 (296-370)||(27626109-27626183)
chr7 (277-366)||(38010704-38010794)
chr7 (262-369)||(3468589-3468697)
chr7 (295-383)||(39334202-39334290)
chr7 (295-367)||(45078287-45078359)
chr7 (295-370)||(33645947-33646021)
chr7 (295-370)||(39360032-39360107)
chr7 (325-383)||(24967100-24967158)
chr7 (295-383)||(7244689-7244777)
chr7 (295-367)||(18749806-18749878)
chr7 (300-360)||(39280983-39281043)
chr7 (295-383)||(39345480-39345568)
chr7 (295-367)||(48157109-48157181)
chr7 (280-367)||(12234878-12234964)
chr7 (295-354)||(24363603-24363662)
chr7 (256-330)||(27481320-27481395)
chr7 (325-368)||(39539769-39539812)
chr7 (398-451)||(24363511-24363564)
chr7 (263-347)||(40688995-40689080)
chr7 (326-382)||(12834936-12834992)
chr7 (318-370)||(29290365-29290417)
chr7 (295-335)||(30812157-30812197)
chr7 (318-370)||(39551534-39551586)
chr7 (263-359)||(39907992-39908088)
[»] chr5 (22 HSPs)
chr5 (278-383)||(32172644-32172750)
chr5 (297-383)||(4619718-4619804)
chr5 (295-366)||(40205064-40205135)
chr5 (295-383)||(41957424-41957512)
chr5 (295-366)||(37611205-37611276)
chr5 (295-366)||(37787935-37788006)
chr5 (295-353)||(31723814-31723872)
chr5 (263-367)||(18704025-18704130)
chr5 (266-370)||(36542268-36542373)
chr5 (295-347)||(4014433-4014485)
chr5 (295-383)||(36774680-36774768)
chr5 (295-370)||(7674657-7674732)
chr5 (295-366)||(17368685-17368756)
chr5 (267-360)||(32408588-32408682)
chr5 (296-370)||(35960423-35960497)
chr5 (325-370)||(11700364-11700409)
chr5 (296-353)||(30217092-30217149)
chr5 (295-351)||(7319013-7319069)
chr5 (295-347)||(7984978-7985030)
chr5 (294-366)||(10125708-10125780)
chr5 (339-379)||(11457151-11457191)
chr5 (295-347)||(39105473-39105525)
[»] chr8 (22 HSPs)
chr8 (294-370)||(25869252-25869328)
chr8 (263-344)||(10075563-10075645)
chr8 (263-360)||(11795068-11795166)
chr8 (295-367)||(4055605-4055677)
chr8 (263-366)||(11183521-11183625)
chr8 (263-352)||(28769343-28769433)
chr8 (294-368)||(36643881-36643955)
chr8 (300-369)||(39866721-39866790)
chr8 (295-372)||(43504760-43504837)
chr8 (295-383)||(33553249-33553337)
chr8 (295-370)||(5088861-5088936)
chr8 (295-370)||(11569443-11569518)
chr8 (295-370)||(39551195-39551270)
chr8 (303-369)||(11185238-11185304)
chr8 (263-368)||(31862469-31862575)
chr8 (294-347)||(11494154-11494207)
chr8 (318-367)||(43704365-43704414)
chr8 (263-370)||(11415130-11415238)
chr8 (295-370)||(29973160-29973236)
chr8 (263-370)||(30013194-30013302)
chr8 (295-367)||(31884603-31884673)
chr8 (294-354)||(42215084-42215144)
[»] chr4 (29 HSPs)
chr4 (1-77)||(24935936-24936012)
chr4 (295-366)||(50800020-50800090)
chr4 (263-352)||(54325041-54325131)
chr4 (295-370)||(53673644-53673719)
chr4 (296-366)||(488116-488186)
chr4 (281-346)||(6364143-6364209)
chr4 (295-380)||(4798542-4798627)
chr4 (300-377)||(6428032-6428109)
chr4 (325-370)||(32071907-32071952)
chr4 (295-366)||(2996582-2996653)
chr4 (300-383)||(21952962-21953045)
chr4 (295-366)||(30631965-30632036)
chr4 (295-362)||(42121497-42121563)
chr4 (296-370)||(2874610-2874684)
chr4 (264-383)||(23819066-23819186)
chr4 (300-370)||(25309550-25309620)
chr4 (263-366)||(53155239-53155340)
chr4 (301-370)||(27123338-27123407)
chr4 (295-352)||(42866077-42866134)
chr4 (322-383)||(52754635-52754696)
chr4 (398-430)||(8422765-8422797)
chr4 (295-363)||(11264310-11264378)
chr4 (299-359)||(14011247-14011307)
chr4 (295-347)||(17822874-17822926)
chr4 (296-367)||(19304557-19304629)
chr4 (300-348)||(19429723-19429771)
chr4 (300-372)||(27405823-27405895)
chr4 (295-343)||(31006027-31006075)
chr4 (318-370)||(45128296-45128348)
[»] chr6 (25 HSPs)
chr6 (295-370)||(2034432-2034507)
chr6 (295-366)||(4324443-4324514)
chr6 (294-379)||(2455818-2455903)
chr6 (294-367)||(4420651-4420724)
chr6 (295-370)||(28088209-28088283)
chr6 (263-364)||(3155152-3155253)
chr6 (275-360)||(3168257-3168343)
chr6 (263-366)||(2027396-2027500)
chr6 (315-367)||(2027787-2027839)
chr6 (263-370)||(6014511-6014619)
chr6 (312-368)||(9667973-9668029)
chr6 (277-383)||(281821-281928)
chr6 (295-366)||(20368170-20368241)
chr6 (297-368)||(34939755-34939826)
chr6 (323-369)||(1019597-1019643)
chr6 (261-366)||(3528777-3528883)
chr6 (295-369)||(4246419-4246493)
chr6 (278-368)||(33301697-33301787)
chr6 (263-367)||(2117379-2117484)
chr6 (301-370)||(2460137-2460206)
chr6 (324-369)||(3738107-3738152)
chr6 (263-383)||(10616514-10616635)
chr6 (277-370)||(30523650-30523743)
chr6 (297-366)||(30523948-30524017)
chr6 (295-359)||(19275633-19275697)
[»] chr1 (45 HSPs)
chr1 (295-368)||(27140487-27140560)
chr1 (266-360)||(44422678-44422773)
chr1 (266-383)||(4622072-4622190)
chr1 (262-383)||(10439661-10439783)
chr1 (263-360)||(12477283-12477381)
chr1 (295-365)||(35080060-35080130)
chr1 (295-360)||(12564495-12564560)
chr1 (295-364)||(39777672-39777741)
chr1 (294-366)||(4699605-4699677)
chr1 (287-366)||(17778957-17779037)
chr1 (318-370)||(19412583-19412635)
chr1 (295-367)||(30014067-30014139)
chr1 (281-351)||(2294905-2294976)
chr1 (295-370)||(4548730-4548805)
chr1 (295-370)||(6231802-6231877)
chr1 (295-370)||(15437972-15438047)
chr1 (324-383)||(15581292-15581351)
chr1 (323-370)||(17628636-17628683)
chr1 (297-368)||(26184759-26184830)
chr1 (295-362)||(28262613-28262680)
chr1 (299-366)||(35925703-35925770)
chr1 (263-353)||(39270428-39270519)
chr1 (277-362)||(11211108-11211194)
chr1 (279-352)||(14629970-14630044)
chr1 (277-366)||(15942737-15942827)
chr1 (264-377)||(16322826-16322940)
chr1 (295-365)||(27963361-27963431)
chr1 (266-350)||(47960629-47960715)
chr1 (298-359)||(16981933-16981994)
chr1 (295-348)||(35179148-35179201)
chr1 (296-333)||(35590915-35590952)
chr1 (293-370)||(43338123-43338200)
chr1 (295-360)||(52190138-52190203)
chr1 (399-435)||(2522703-2522739)
chr1 (264-343)||(4078162-4078242)
chr1 (295-347)||(5047155-5047207)
chr1 (263-383)||(6262715-6262835)
chr1 (294-354)||(6279407-6279467)
chr1 (301-369)||(15579497-15579565)
chr1 (300-368)||(28689440-28689508)
chr1 (295-367)||(29834894-29834966)
chr1 (296-364)||(37593676-37593744)
chr1 (263-366)||(45205044-45205148)
chr1 (295-347)||(45975699-45975751)
chr1 (295-366)||(51695484-51695556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (295-370)||(306335-306410)
[»] scaffold0147 (1 HSPs)
scaffold0147 (302-370)||(12690-12758)


Alignment Details
Target: chr2 (Bit Score: 419; Significance: 0; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 69 - 601
Target Start/End: Original strand, 42131421 - 42131932
Alignment:
Q  69 cttggagaattgctcctctattgatctttcaggatccatcttttaaatcaatacctgtgagaaagctgctgaaagcagttgaggaaatcagtactactac 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131421 cttggagaattgctcctctattgatctttcaggatccatcttttaaatcaatacctgtgagaaagctgctgaaagcagttgaggaaatcagtactactac 42131520  T
Q  169 aatgactgcattcgtctttacaagaattgaaattcgggaacatgtttggataaacaacttaattaggcgtgtatcatataactaaagtaaaccgaagtca 268  Q
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131521 ---------------------aagaattgaaattcgggaacatgtttggataaacaacttaattaggcgtgtatcatataactaaagtaaaccgaagtca 42131599  T
Q  269 aactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131600 aactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 42131699  T
Q  369 atcatctcttccaaaaattcttgtttccttaagtgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaaaggaagttgctaaacaa 468  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131700 atcatctcttccaaaaattctcgttttcttaagtgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaaaggaagttgctaaacaa 42131799  T
Q  469 gtttggttactcagggaatttaatatgatcttctgaacaagnnnnnnnnnncctttccttaagggataagttactaaatttagaaaagacatgattcaca 568  Q
    ||||||||||||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131800 gtttggttactcagggaatttgatatgatcttctgaacaagtttttttttttctttccttaagggataagttactaaatttagaaaagacatgattcaca 42131899  T
Q  569 agttttagagataaaatggagagggagttatat 601  Q
    |||||||||||||||||||||||||||||||||    
T  42131900 agttttagagataaaatggagagggagttatat 42131932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42131378 - 42131302
Alignment:
Q  1 ggtgccggtccaagtggcatatcagctgcttatgcattatcaaggcttggttataataatatcactgtcttggagaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42131378 ggtgccggtccaagtggcatatcagctgcttatgcactatcaaggcttggttataataatatcactgtcttggagaa 42131302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 34652097 - 34652025
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||||||||| |||||| |||| ||||||||| | ||| |||||||||||||||| ||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 34652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 10285836 - 10285936
Alignment:
Q  263 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||||||  | ||||||||| |||||| | ||| ||||||||| ||| ||||||||| ||||||||| | ||| |||||||||||||||| ||||||    
T  10285836 aagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagt 10285935  T
Q  362 t 362  Q
    |    
T  10285936 t 10285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 15120192 - 15120280
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||| |||||||||||||||| ||||   ||||||||||||| ||||| ||| |||||| ||||||||||||||| | |||| |||||    
T  15120192 ttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaa 15120280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 43205289 - 43205393
Alignment:
Q  267 caaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 365  Q
    |||||| || ||||||||||||||| |  |||||||||||||||| ||||| |||| ||||||||| | ||| ||| ||  |||||||||||| ||||||    
T  43205289 caaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaacagtttgcggacatgttatatgttgtt 43205388  T
Q  366 tccat 370  Q
    |||||    
T  43205389 tccat 43205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 1939393 - 1939323
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 365  Q
    ||||||||||||||  |||||| |||| ||||||||| | ||| |||||||||||||||| ||||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 22681265 - 22681175
Alignment:
Q  277 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||| |||||||  ||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||| |||||||||  |||||||    
T  22681265 tcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttt 22681175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 10285367 - 10285439
Alignment:
Q  298 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||| |||||||| || |||||||| ||||||||| ||| |||||||||||||||| |||| |||| |||||    
T  10285367 tcataggctatcatagataacttaagaaaataagctgaaaacagcttatggacatgtcataacttgtctccat 10285439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 32821818 - 32821906
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| |  ||| ||||  ||||||| || ||| |||||||||||||||| |||||||||||| || | ||||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaa 32821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 1742127 - 1742005
Alignment:
Q  262 gaagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    ||||||||||| ||   |||||||||||||||  ||||||||| |||||||| |||  ||| ||||||||| | ||   |||||||| |||||| |||||    
T  1742127 gaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataag 1742028  T
Q  361 ttgtttccatcatctcttccaaa 383  Q
    |||||||||| | |||| |||||    
T  1742027 ttgtttccataagctctcccaaa 1742005  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 33525999 - 33525953
Alignment:
Q  324 gaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||    
T  33525999 gaaataagctgaaaccaacttatggacatgttataagttgtttccat 33525953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 4606938 - 4607006
Alignment:
Q  299 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 366  Q
    ||||||||||| ||||||||||| | ||||||||| ||||||||| ||| || |||| |||||||||||    
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttt 4607006  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 11513874 - 11513958
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttat 346  Q
    |||||||| | || ||||||||| ||||||   ||||||||||||||||||||||||||  ||||||||||| |||  |||||||    
T  11513874 aagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttat 11513958  T

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Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 36415734 - 36415663
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||||| |||||||| | ||||||| | ||| || |||||| ||||| |||||||||||||    
T  36415734 ttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatg-tataagttgtttc 36415663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 750680 - 750731
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    |||||||||||||| ||||||||||| | ||||||||| ||| |||||||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatg 750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 18066118 - 18066173
Alignment:
Q  277 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataag 331  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||||||| |||||||    
T  18066118 tcatataagctataagctgttttcataagctatcttggagaacttaagaaaataag 18066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 383
Target Start/End: Complemental strand, 18179300 - 18179213
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||||||||||| ||||||||||| | ||||||||| |||  |||| ||||||||||  |||| ||||| ||| | | ||||||||    
T  18179300 tttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacacttccaaa 18179213  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 29316836 - 29316765
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||  | |||||| |||||| ||||| |||||    
T  29316836 ttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 389
Target Start/End: Original strand, 33256716 - 33256843
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| || ||||||||  |||||||| ||||||||||| ||| || ||| | || | ||||||||| | | ||| ||||| |||||| |||||     
T  33256716 aagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagc 33256815  T
Q  362 tgtttccatcatctcttccaaaaattct 389  Q
    ||||| ||| | |||| |||||||||||    
T  33256816 tgttttcataagctctcccaaaaattct 33256843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 43065511 - 43065440
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||| |||| |||||| ||||  |||||||||| ||| ||  |||||||||||| |||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttt 43065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 10563619 - 10563545
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    ||||||||||||||  || ||| |||||| ||||||||| |||  ||||||||||||||| ||| | ||||||||    
T  10563619 ttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcataggctgtttcca 10563545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 380
Target Start/End: Complemental strand, 17221634 - 17221516
Alignment:
Q  263 aagtcaaactattctcatataagatat-aagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||| | |||||||||||| ||| |||  |||||||||||||||   |||| |||| ||||||||||| |||  || ||||||| |||| |||||     
T  17221634 aagtcaaattgttctcatataagctattaagtgttttcataagctatccgagagatcttacggaaataagctaaaaaaagtttatggatatgtcataaga 17221535  T
Q  362 tgtttccatcatctcttcc 380  Q
    | ||||||| | |||||||    
T  17221534 tatttccataagctcttcc 17221516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 28039412 - 28039322
Alignment:
Q  277 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||  |||||||| |||||||||||| || |||| || ||| ||||||||||| ||| ||||||||| ||| || |||| ||||||    
T  28039412 tcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaacaagtcataacttgttt 28039322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 680496 - 680593
Alignment:
Q  280 tataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctc 376  Q
    |||||| ||||||| |||||||||||||||| || |||||||  | ||||||||| ||| ||| ||||  |||||| ||||| ||||| ||| |||||    
T  680496 tataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataatctc 680593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 5133764 - 5133869
Alignment:
Q  279 atataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 377  Q
    |||||||||||||||  |||||| ||| ||||   |||| |||| ||||||||||| |||| ||||||||  ||||| |||||||||||  || ||| ||    
T  5133764 atataagatataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataatccct 5133863  T
Q  378 tccaaa 383  Q
    ||||||    
T  5133864 tccaaa 5133869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 41042084 - 41042011
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||| || |||| ||||||  ||| ||||||||| | ||| ||||| |||||||||| ||||||||||||    
T  41042084 attttcatgagttatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttc 41042011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 43635159 - 43635090
Alignment:
Q  298 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||||||||| | | |||| | ||||||||||||| |||||||  ||||||| ||||||| ||||    
T  43635159 tcataagctatcatgaaaagcttatgaaaataagcttaaaacagcttacagacatgtcataagttttttc 43635090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 3102669 - 3102764
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttata 358  Q
    ||||||||||||| | ||||||  ||| |||  |||||||||  ||||||||||||||||   ||||| ||| ||| ||||||||||||||||||||    
T  3102669 aagtcaaactatttttatataatctattagctgttttcataatttatcatggagaacttacaaaaata-gctgaaatcagcttatggacatgttata 3102764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 370
Target Start/End: Complemental strand, 13189432 - 13189372
Alignment:
Q  310 atggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||| |||| ||||||||||| |||| |  ||||||| ||||||||| ||||||||||    
T  13189432 atggagagcttatggaaataagctgaaagtaatttatggatatgttataaattgtttccat 13189372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 40279416 - 40279488
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 366  Q
    ||||||||||||||  ||||||||||| | ||||||| | ||| ||| |||||||| |||||| |||||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggacaatgttaaaagttgttt 40279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 37273143 - 37273231
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| ||||||||||| ||||||||| | ||| || ||||||||||||| ||||||||||||||| | |||| |||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaa 37273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 278 - 383
Target Start/End: Original strand, 21574482 - 21574587
Alignment:
Q  278 catataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 377  Q
    |||||||| |||||   |||| |||||||| |||||||| |||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||| | ||||    
T  21574482 catataagctataactttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctct 21574581  T
Q  378 tccaaa 383  Q
     |||||    
T  21574582 cccaaa 21574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 43115065 - 43115153
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||| | ||||||| |||| |||| ||||||||||| ||| ||  |||||||||||| ||||||||||||||| | ||||||||||    
T  43115065 ttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaa 43115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 9279387 - 9279312
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||| |||||||| |||  ||||||||||||||| ||| ||||||||  |||||||||||| |||||||||    
T  9279387 ttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttatatacatgttataagctgtttccat 9279312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 31010411 - 31010483
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||| ||| ||||||| |||| |||| |||| |||||| ||| |||||||||||||||| ||||||||||||    
T  31010411 ttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttc 31010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 13804794 - 13804856
Alignment:
Q  303 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 365  Q
    ||||||| | ||||||||||| ||||||| | ||| |||||||||||||||| ||||||||||    
T  13804794 agctatcgttgagaacttaagaaaataagttgaaaacagcttatggacatgtcataagttgtt 13804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 277 - 366
Target Start/End: Original strand, 11253492 - 11253581
Alignment:
Q  277 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||| |||||||  |||||||||||||| | |||| |||| ||||||| ||| ||| ||| |||| || |||| |||||||||||    
T  11253492 tcatataagctataagctgtttcataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgttt 11253581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 34254870 - 34254805
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    |||||||||||||||  ||||||||||| | ||||||||| |||| |||||||||| |||| ||||    
T  34254870 attttcataagctattctggagaacttatgtaaataagctgaaagtagcttatggatatgtcataa 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 367
Target Start/End: Original strand, 41452499 - 41452604
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| || |||||| || | |||||  ||||||||||||||| ||||||| ||  ||||||||| | ||| |||||||| ||||| | ||||||    
T  41452499 aagtcaaactgttttcatattagttgtaagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagt 41452598  T
Q  362 tgtttc 367  Q
    ||||||    
T  41452599 tgtttc 41452604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 1217861 - 1217773
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| | ||||||||| | || |||| | ||| || ||||||||||||| ||||| ||||||| | | ||||||||||    
T  1217861 ttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 1217773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 41644506 - 41644454
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| | |||| |||||||||||||||| ||| |||||||||    
T  41644506 ttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatg 41644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 54180841 - 54180769
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||| ||||||| ||||   ||||||||| ||| || ||||||||||||| ||||| ||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtttc 54180769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 2201104 - 2201211
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| || ||||||||| |||||||  ||||||| ||||||| |||| |  ||||||||| ||||| |||  || ||||| |||| | ||||||    
T  2201104 aagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaacatatcataagt 2201203  T
Q  362 tgtttcca 369  Q
    ||||||||    
T  2201204 tgtttcca 2201211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 22214720 - 22214661
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 354  Q
    ||||||||||||||| | ||||  ||| ||||||||||| ||| ||||||||||||||||    
T  22214720 ttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgt 22214661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 42537057 - 42537124
Alignment:
Q  303 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||||||| | ||||| ||||||  || ||| |||||| ||||||||| |||||||||||||||    
T  42537057 agctatcatggaaagcttaaagaaatagactgaaaacagcttgtggacatgtaataagttgtttccat 42537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 43875624 - 43875683
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaactta 321  Q
    |||||||||| |||||||||||| ||||||   |||||||||||||||||||||| ||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagctta 43875683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 49465726 - 49465655
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||  ||||||||||| |||||||||||||||  | || ||| |||||| ||||| |||||    
T  49465726 ttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttt 49465655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 51130759 - 51130818
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 354  Q
    |||||||||||||||||||||| ||   | ||||||||| |||||| |||||||||||||    
T  51130759 ttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgt 51130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 36200110 - 36200176
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||| || ||| || | ||||||||||| ||| || ||||||||||||| |||||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 41807172 - 41807230
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||| |||||||||||   |||||| ||||| ||||||||| ||||||||||||    
T  41807172 aaataagctaaaagcagcttacatacatgtcataagatgtttccataatctcttccaaa 41807230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 50952347 - 50952413
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||| ||||| |||||| |||| ||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 21367676 - 21367725
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagctt 344  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||| ||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 41724251 - 41724296
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagttgtttccat 41724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 43875477 - 43875546
Alignment:
Q  298 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||| ||||||||||| |||||||| |  ||| || ||||||||| | | ||||||||||||    
T  43875477 tcataagctatcctggagaacttatggaaataatcagaaaacaacttatggacgtatcataagttgtttc 43875546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 43948664 - 43948717
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 348  Q
    ||||||||||||||| |||| | ||| |||||||||||| ||| ||||||||||    
T  43948664 ttttcataagctatcttggaaagcttgaggaaataagctgaaaacagcttatgg 43948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 351
Target Start/End: Original strand, 2719477 - 2719533
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 351  Q
    ||||||||||||||| ||||||||||| | ||||||||| | | || ||||||||||    
T  2719477 ttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 2719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 24887377 - 24887270
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| |  ||||||||| || ||||  ||||||||||||||| |||||| |||| || |||||||| ||| ||| |||  ||||||| |||| |    
T  24887377 aagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacag-ttaatgacatgtcataaat 24887279  T
Q  362 tgtttccat 370  Q
    |||||||||    
T  24887278 tgtttccat 24887270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 36646443 - 36646355
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| | ||||  |||  |||||||| | ||| |||||||||||||||  |||||| |||||||| | |||| |||||    
T  36646443 ttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaa 36646355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 44488892 - 44488956
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    ||||||||||||||| | ||||||||| ||||||||||| ||| | ||| |||| ||||| ||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaaccgctcatgggcatgtcataa 44488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 45541579 - 45541651
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||||||||| |||| |||||| |  ||||| || ||| ||||||||| |||||| ||||| |||||    
T  45541579 attttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttt 45541651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 48049043 - 48048975
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttg 363  Q
    ||||||| ||||||| ||| ||  ||| ||||||||||| ||| |||||||||||||||| || |||||    
T  48049043 ttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcatgagttg 48048975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 49546541 - 49546473
Alignment:
Q  299 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||||| ||||  |||||| ||| ||| || ||||| || ||||||| |||||||||    
T  49546541 cataagctatcatggagagcttattgaaatatgctgaaaacaacttatagaaatgttatgagttgtttc 49546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 40191379 - 40191305
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||| ||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||| |||||||||    
T  40191379 tttcataatctatcatggagaacttatggaaataatcttgaagcaacttatgaacatgttataagctgtttccat 40191305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 27626183 - 27626109
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| |||||||||||| ||| |||| ||||||||| ||||| ||| |||||||||||| ||||| |||||||||    
T  27626183 tttcctaagctatcatgaagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccat 27626109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 277 - 366
Target Start/End: Original strand, 38010704 - 38010794
Alignment:
Q  277 tcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||| |||||||  ||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||| |||||||||  |||||||    
T  38010704 tcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttt 38010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 3468589 - 3468697
Alignment:
Q  262 gaagtcaaactattctcatataagatataagcatttt-cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||||||||||||| || |||||| ||||||| |||| ||||| ||||| | ||||||||  ||||||||| |  || || ||||||||||||| || ||    
T  3468589 gaagtcaaactattttcgtataagttataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattag 3468688  T
Q  361 ttgtttcca 369  Q
    |||||||||    
T  3468689 ttgtttcca 3468697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 39334202 - 39334290
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||| |||||||| ||| || |||| ||||||||||| || ||| ||||||||||||| |||| |||||||||| | |||| |||||    
T  39334202 ttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaa 39334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 45078287 - 45078359
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||| ||| |||||  ||||||||| | ||| |||||||||||||||| ||||||| ||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttc 45078359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 33646021 - 33645947
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| || ||||| ||||||| |||||||||||||||    
T  33646021 ttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccat 33645947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 39360032 - 39360107
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||| |||||||| ||| || ||||  |||||||||| |||||| |||||||| |||| |||||||||||||||    
T  39360032 ttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccat 39360107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 24967100 - 24967158
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||| ||| || ||| |||| |||||||||||||||||||| ||||||||||||    
T  24967100 aaataagctgaaaacaacttctggatatgttataagttgtttccataatctcttccaaa 24967158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 7244689 - 7244777
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||  |||||| |||| | ||||||||| ||| || ||||||  ||||| |||| |||||||||||| ||||| ||||    
T  7244689 ttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaa 7244777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 18749878 - 18749806
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||| ||| |||||| ||||||||||| ||| | ||||||| ||||||  |||| ||||||    
T  18749878 ttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcgtaagctgtttc 18749806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 39280983 - 39281043
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||||||||| |||||||| || ||||||||||| ||| || ||||||||||| |||||||    
T  39280983 ataagctatcttggagaacatatggaaataagctgaaaacaacttatggacatattataag 39281043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 39345480 - 39345568
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||| |||||||| ||  || |||| ||||||||||| |||||| ||||||||||||| ||||  ||||||||| | |||| |||||    
T  39345480 ttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccatgaactctaccaaa 39345568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 48157181 - 48157109
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||| |||||||   ||||| |||| ||||||||||| ||| |||||||||||||||  ||||||||||||    
T  48157181 ttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttc 48157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 12234964 - 12234878
Alignment:
Q  280 tataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||| |||||| ||||| || |||| || | |||| |||| ||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  12234964 tataagttataag-atttttatgagctttcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttc 12234878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 24363662 - 24363603
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 354  Q
    ||||||||||||||| ||||||  ||| ||||||||||| ||| || |||||||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 27481395 - 27481320
Alignment:
Q  256 taaaccgaagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataa 330  Q
    |||| |||||||||||| ||  |||||||| ||||||  ||||||||||||||||||||| | |||| ||||||||    
T  27481395 taaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 39539812 - 39539769
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagttgtttcc 39539769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 24363564 - 24363511
Alignment:
Q  398 taagtgtttatgccagtaggtaaactcaaataaatcaaccaaaacaggtcctaa 451  Q
    |||||| |||||| ||||| |||||||||||||| ||| | |||||||||||||    
T  24363564 taagtgcttatgctagtagataaactcaaataaaacaatccaaacaggtcctaa 24363511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 40689080 - 40688995
Alignment:
Q  263 aagtcaaactattctcatataagatataagcatt-ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    |||| ||| |||| ||||||||| |||||||  | ||||||||||||| |||| |||||| | ||||||||| ||| |||||||||    
T  40689080 aagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 12834992 - 12834936
Alignment:
Q  326 aataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaa 382  Q
    |||||||| ||| ||| |||||||||||| ||||| ||||||||| |||||| ||||    
T  12834992 aataagctgaaaacagtttatggacatgtcataagctgtttccataatctctaccaa 12834936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 29290365 - 29290417
Alignment:
Q  318 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| ||||||| | | ||| |||||||||||||||| |||||||||||||||    
T  29290365 cttacggaaatatgttgaaaacagcttatggacatgtcataagttgtttccat 29290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 30812157 - 30812197
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagctta 335  Q
    ||||||| |||||||||||||| |||| |||||||||||||    
T  30812157 ttttcattagctatcatggagagcttatggaaataagctta 30812197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 39551586 - 39551534
Alignment:
Q  318 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| ||||||||||| | | || ||||||||||||| |||||||||||||||    
T  39551586 cttatggaaataagctgacaacaccttatggacatgtcataagttgtttccat 39551534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 39908088 - 39907992
Alignment:
Q  263 aagtcaaactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    ||||||||  ||| ||||||||| |||||||  || |||||||||   |||||| |||  ||||||||| | ||| |||||||||||||||| ||||    
T  39908088 aagtcaaataattatcatataagctataagctgttccataagctaaattggagagcttgtggaaataagatgaaaccagcttatggacatgtcataa 39907992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 278 - 383
Target Start/End: Original strand, 32172644 - 32172750
Alignment:
Q  278 catataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctc 376  Q
    |||||||| |||||||  |||||||||||||||||| |||||| | ||||||||||| |||   |||||||||||||| ||||||||||||||| | |||    
T  32172644 catataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctc 32172743  T
Q  377 ttccaaa 383  Q
    | |||||    
T  32172744 tcccaaa 32172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 4619718 - 4619804
Alignment:
Q  297 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||||||||||||| ||||||||| | ||| ||||||||| |||||| || |||||||| ||| | |||| |||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaa 4619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 40205135 - 40205064
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| |||||| ||||  |||||||||| ||| ||| |||||||||||||||||| |||||    
T  40205135 ttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 41957512 - 41957424
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| | ||||||||| | ||||||| | ||| || ||||||||||||| ||||| ||||||| | | ||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 41957424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 37611276 - 37611205
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| ||||||||| |||||| | |||||||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttt 37611205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 37788006 - 37787935
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| |||||| |||| |||||||| || ||| ||||||||| |||||| | |||||||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttt 37787935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 31723814 - 31723872
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 353  Q
    ||||||||| ||||| |||||| |||| ||||| ||||||||| |||||||||||||||    
T  31723814 ttttcataaactatcttggagaccttacggaaaaaagcttaaaacagcttatggacatg 31723872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 367
Target Start/End: Complemental strand, 18704130 - 18704025
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||| ||||| | ||||||| ||||||   |||||||||||||| |   ||| |||| ||||||||||| ||| || ||||| ||||||||||||||    
T  18704130 aagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgttataagt 18704031  T
Q  362 tgtttc 367  Q
    ||||||    
T  18704030 tgtttc 18704025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 370
Target Start/End: Complemental strand, 36542373 - 36542268
Alignment:
Q  266 tcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 364  Q
    ||||||| |||||||||||| |||||||   ||| |||||||||| | |||| |||  ||||||||| | ||| |||||| ||||||||| ||||| |||    
T  36542373 tcaaactgttctcatataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgt 36542274  T
Q  365 ttccat 370  Q
    ||||||    
T  36542273 ttccat 36542268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 4014485 - 4014433
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||| |||||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 36774768 - 36774680
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||| |||||||||| |||||| |||| ||||||||||| ||| || |||  |||||||| |||||  |||||||| | ||||||||||    
T  36774768 tttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataagccgtttccataagctcttccaaa 36774680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 7674657 - 7674732
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| ||||||| ||  | ||||||||| ||| || |||||  |||||| |||||||||||||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccat 7674732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 17368685 - 17368756
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| ||||||  ||| ||||||||||| ||| | || |||| |||||| |||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 32408682 - 32408588
Alignment:
Q  267 caaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||| |||| ||||||||| ||||| | |||||||||||||||| || ||| |||| ||||||||||  ||| || |||| |||||||| |||||    
T  32408682 caaattattttcatataagctataaactattttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcataag 32408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 35960423 - 35960497
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||||||||| |||| | | ||| |||||||||| ||| || |||||||||||||  ||||||| ||||||    
T  35960423 tttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccat 35960497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 11700409 - 11700364
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||| || ||| |||||||||||||||| |||||||||||||||    
T  11700409 aaataatctgaaaacagcttatggacatgtcataagttgtttccat 11700364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 30217092 - 30217149
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 353  Q
    |||||||||||||| |||||| |||| |||||||| | |||| || ||||||||||||    
T  30217092 tttcataagctatcctggagagcttatggaaataaacctaaaacaacttatggacatg 30217149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 7319069 - 7319013
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 351  Q
    ||||||||||||||| ||||||||||| | ||||||||| | | || ||||||||||    
T  7319069 ttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 7319013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 7984978 - 7985030
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| ||||||| ||| | ||||||||| ||| |||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 10125780 - 10125708
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||| || |||||||| |||| | ||||||||| ||| || |||||  |||||| |||||||||||    
T  10125780 attttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 11457151 - 11457191
Alignment:
Q  339 cagcttatggacatgttataagttgtttccatcatctcttc 379  Q
    |||||||||||||||| ||||||||||||||| | ||||||    
T  11457151 cagcttatggacatgtcataagttgtttccataagctcttc 11457191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 39105473 - 39105525
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||  ||||||||    
T  39105473 ttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatg 39105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 25869328 - 25869252
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||| |||||||||||||  ||| ||||||||||| ||| || ||||||||||||| ||||||| |||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttccat 25869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 10075645 - 10075563
Alignment:
Q  263 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagctt 344  Q
    ||||||||||||| | ||||||| ||||||| |||||||||||||||| | |||| |||| | ||||||||| ||||||||||    
T  10075645 aagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaataagctaaaagcagctt 10075563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 11795068 - 11795166
Alignment:
Q  263 aagtcaaactattctcatataagatataagcat-tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||||| ||| || ||||||||| |||||||   ||||||||||||| ||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||    
T  11795068 aagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 4055677 - 4055605
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||   |||| |||||||||||||||| ||| ||| |||||||||||| ||||||| ||||    
T  4055677 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 4055605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 11183521 - 11183625
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| | ||||||| || |||||||  |||||| |||||| | |||||| |||| ||||||||||| ||| |||||||| ||||| | ||||||    
T  11183521 aagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagt 11183620  T
Q  362 tgttt 366  Q
    |||||    
T  11183621 tgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 352
Target Start/End: Complemental strand, 28769433 - 28769343
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 352  Q
    ||||||||||||| || |||||| |||||||  ||||||||||||||  ||||||  ||| ||||||||||| ||| || |||||||||||    
T  28769433 aagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacat 28769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 36643955 - 36643881
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    ||||||||||||||||||||||||| || ||||||||||| |||  || ||| | || ||| |||||||||||||    
T  36643955 attttcataagctatcatggagaacgtatggaaataagctgaaaatagtttacgaacgtgtgataagttgtttcc 36643881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 39866790 - 39866721
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    |||||||||| || ||| |||| | |||||| || ||| ||||||||||||||| |||||||||||||||    
T  39866790 ataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgtttcca 39866721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 43504760 - 43504837
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatca 372  Q
    |||| |||||||||| ||||||||||| ||||||||||| ||| ||||||||  ||| ||  |||||||||| |||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatca 43504837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Original strand, 33553249 - 33553337
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    ||||||||||||||| || ||| |||| |||||||||||   | ||||||| |||||||| |||||||| ||| || | ||||||||||    
T  33553249 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 33553337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 5088861 - 5088936
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||| |||| ||| |||||| ||||  |||||||| | ||| |||||||||||||||||||||  |||||||||    
T  5088861 ttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccat 5088936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 11569518 - 11569443
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||||||||||  ||  | ||||||||| ||| || |||||| |||||| ||||| |||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccat 11569443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 39551270 - 39551195
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||||||| || |||||| ||||   ||||||| | ||| |||||| ||||||||| |||||||||||||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccat 39551195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 11185238 - 11185304
Alignment:
Q  303 agctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    |||||||||||||| || | ||||||||| | ||| || |||||| |||||||||||| ||||||||    
T  11185238 agctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgtttcca 11185304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 31862469 - 31862575
Alignment:
Q  263 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||||||||| |||||| ||||||   |||||||||| |||| | |||| |||| | ||||||||| ||| ||||||||| | | || ||||||    
T  31862469 aagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagt 31862568  T
Q  362 tgtttcc 368  Q
    || ||||    
T  31862569 tgcttcc 31862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 11494154 - 11494207
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    |||||||||||||||| || ||| |||| | ||||||||| |||||||||||||    
T  11494154 attttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatg 11494207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 43704414 - 43704365
Alignment:
Q  318 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||| ||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  43704414 cttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttc 43704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 11415130 - 11415238
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||| |||| | ||||||| |||| ||  ||||||||||||||| | ||||  ||  | ||||||||| | |  |||||||||||||||||||||     
T  11415130 aagtcaaattatttttatataagttatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagc 11415229  T
Q  362 tgtttccat 370  Q
    |||||||||    
T  11415230 tgtttccat 11415238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 29973160 - 29973236
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagc-agcttatggacatgttataagttgtttccat 370  Q
    |||||| |||||||| | ||||| ||| |||||||| || ||| | ||||| |||||||||| ||||||||||||||    
T  29973160 ttttcacaagctatccttgagaatttatggaaataaactgaaaaccagcttttggacatgttgtaagttgtttccat 29973236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 30013194 - 30013302
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| ||  |||||||| |||||||  ||||||||||||||| || |||||| | ||||||||||| |||  || ||| |||||  | |||||     
T  30013194 aagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggacacttgataaga 30013293  T
Q  362 tgtttccat 370  Q
    |||||||||    
T  30013294 tgtttccat 30013302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 31884603 - 31884673
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||||||||||||||||  ||||  ||||||||| ||| ||| |||||  ||||||||||||||||||    
T  31884603 ttttcataagctatcatggagagtttaa-taaataagctgaaaacag-ttatgatcatgttataagttgtttc 31884673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 42215144 - 42215084
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 354  Q
    |||||||||||||||| |||||| |||| | ||||||||| ||| || |||||| ||||||    
T  42215144 attttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24936012 - 24935936
Alignment:
Q  1 ggtgccggtccaagtggcatatcagctgcttatgcattatcaaggcttggttataataatatcactgtcttggagaa 77  Q
    ||||| |||||||||||| |||||||||||||||||||| | |||||||||||||| ||| | || || ||||||||    
T  24936012 ggtgctggtccaagtggcttatcagctgcttatgcattaaccaggcttggttataagaatgttacagttttggagaa 24935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 50800090 - 50800020
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||| ||||||||||||||||||||  ||||||||||| ||| |||||||| ||||||| |||||||||||    
T  50800090 ttttcttaagctatcatggagaacttt-ggaaataagctgaaaacagcttatagacatgtcataagttgttt 50800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 352
Target Start/End: Complemental strand, 54325131 - 54325041
Alignment:
Q  263 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 352  Q
    |||||||||| || ||||||||| ||||||| ||||||| |||||||||||||||  ||| ||| |||| || ||| ||||||||||||||    
T  54325131 aagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatggacat 54325041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 53673719 - 53673644
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| |||||| |||| | ||||||||| ||| || ||||||||||| | ||| |||||||||||    
T  53673719 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgatatgttgtttccat 53673644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 488186 - 488116
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||||||| ||||||| ||| | ||||||| | ||| ||||||||| |||||| |||||||||||    
T  488186 tttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagttgttt 488116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 6364143 - 6364209
Alignment:
Q  281 ataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttat 346  Q
    ||||| |||||||| |||||||||||||| |||||||||||| | ||||||||| ||| ||||||||    
T  6364143 ataagctataagcaattttcataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 4798627 - 4798542
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttcc 380  Q
    ||||||||||||||| |||||| |||| | ||||||||| ||| ||||||||| |||||| | |||  |||||||| | |||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcc 4798542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 6428032 - 6428109
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctct 377  Q
    ||||||||  ||| ||| |||| ||||||| ||||||| || ||||||||||||| ||||||||||| ||| ||||||    
T  6428032 ataagctactatgaagagcttatggaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctct 6428109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 32071907 - 32071952
Alignment:
Q  325 aaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  32071907 aaataagcttaaaacagcttatggacgtgtcataagttgtttccat 32071952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 2996582 - 2996653
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| |||||| | || | ||||||| | |||  ||||||||||||||| |||||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttt 2996653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 21952962 - 21953045
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||||||| |  ||| ||||||||||||| || ||| ||| |||||||||||| ||||||| ||||||| | |||| |||||    
T  21952962 ataagctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaa 21953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 30631965 - 30632036
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||| |||||||||| ||  |||  ||||||||||||||| ||||||||| |||||  |||||||||||    
T  30631965 ttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttgttt 30632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 42121497 - 42121563
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 362  Q
    ||||||| ||||||| ||||||||||  ||||||||||| ||| ||||||||| |||||| |||||||    
T  42121497 ttttcatgagctatcttggagaacttgtggaaataagctgaaa-cagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 2874684 - 2874610
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||  ||||  |||| ||||||||||  |||  || |||||||||||| |||||||||||||||    
T  2874684 tttcataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccat 2874610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 383
Target Start/End: Original strand, 23819066 - 23819186
Alignment:
Q  264 agtcaaactattctcatataagatataagcat--tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||||| || ||||||||| ||||| |||  |||||||||||||| || ||| ||||  |||||||| | ||| || ||||||||||||| |||||     
T  23819066 agtcaaactgttttcatataagttataa-catgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagc 23819164  T
Q  362 tgtttccatcatctcttccaaa 383  Q
    ||||| | | | ||||||||||    
T  23819165 tgttttcttaaactcttccaaa 23819186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 25309550 - 25309620
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| |||||||||| | |||| ||||||||||||||| ||||||| ||| | ||  ||||||||||||||    
T  25309550 ataaactatcatggaaagcttatggaaataagcttaaaacagcttacggataagtcttaagttgtttccat 25309620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 53155239 - 53155340
Alignment:
Q  263 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||| ||||||| ||||||| | ||||| | |||||||||||||||||||   |||||  | ||||||||| ||||||  |||| ||||||| ||||||    
T  53155239 aagtcgaactattttcatatatgctataaactattttcataagctatcatg---aacttgtgaaaataagctgaaagcaatttatagacatgtcataagt 53155335  T
Q  362 tgttt 366  Q
    |||||    
T  53155336 tgttt 53155340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 27123407 - 27123338
Alignment:
Q  301 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||| ||||||| |||| ||||||||| | ||| || ||||  ||||||| |||||||||||||||    
T  27123407 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccat 27123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 42866077 - 42866134
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 352  Q
    ||||||||||||||| | |||| |||| |||| |||||| |||||| |||||||||||    
T  42866077 ttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacat 42866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 52754635 - 52754696
Alignment:
Q  322 aggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||| | ||||||||||    
T  52754635 aggaaataagctgaaagcagcttatggacacgtcataaactgttttcataagctcttccaaa 52754696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 8422797 - 8422765
Alignment:
Q  398 taagtgtttatgccagtaggtaaactcaaataa 430  Q
    ||||||||||||||||||| |||||||||||||    
T  8422797 taagtgtttatgccagtagttaaactcaaataa 8422765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 11264310 - 11264378
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttg 363  Q
    ||||||||||| ||| | |||| |||| ||||||||| | ||| ||| |||||||||||| ||||||||    
T  11264310 ttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttg 11264378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 14011247 - 14011307
Alignment:
Q  299 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    ||||||||||| |||||| |||| ||||||||||| ||| |||||||  ||||||| ||||    
T  14011247 cataagctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataa 14011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 17822926 - 17822874
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||  ||||||||    
T  17822926 ttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatg 17822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 19304557 - 19304629
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaa-taagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||| |||||||||||||||| ||||| |||| | |||  |||||||||| |||| ||||| ||||||    
T  19304557 tttcataagttatcatggagaacttatggaaattaagttgaaaagagcttatggaaatgtcataagctgtttc 19304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 19429723 - 19429771
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 348  Q
    |||||||||| |||||| |||| ||||||||||| ||| ||||||||||    
T  19429723 ataagctatcctggagagcttatggaaataagctgaaaacagcttatgg 19429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 27405823 - 27405895
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatca 372  Q
    ||||||||||||||| ||||||   ||||||||| |||  |||||| | | ||||||||||||||||| ||||    
T  27405823 ataagctatcatggaaaacttatataaataagctgaaaatagcttaagaaaatgttataagttgtttcgatca 27405895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 31006027 - 31006075
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagct 343  Q
    ||||||||||||||||| || |||||| ||||||||||| ||| |||||    
T  31006027 ttttcataagctatcatagataacttacggaaataagctgaaaacagct 31006075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 45128348 - 45128296
Alignment:
Q  318 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| ||||||||||| ||| ||||| ||||||||| ||| ||||||||||||    
T  45128348 cttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccat 45128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 2034507 - 2034432
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||| |||| ||| ||||| |||||||||| ||| ||||||||||| |||| ||||| |||||||||    
T  2034507 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagctgtttccat 2034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 4324514 - 4324443
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||| |||| |||||| | ||||||||| ||||||| ||| |||||||| |||||||||||    
T  4324514 ttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgttt 4324443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 379
Target Start/End: Original strand, 2455818 - 2455903
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttc 379  Q
    |||||||||||||||| |||||| |||| ||||||||| | |||  || |||||| ||||| ||||||||||||||| | ||||||    
T  2455818 attttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctcttc 2455903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 4420651 - 4420724
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||| ||||||||| |||||| |||| ||||||||||| ||| ||||||||| |||||| |||| |||||||    
T  4420651 attttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttc 4420724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 28088283 - 28088209
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||||||||||||||||| || | ||||||||||| ||| || | ||| |||||| ||||||||||||||||    
T  28088283 ttttcataagctatcatggagagctcatggaaataagctcaaaacaacctatagacatg-tataagttgtttccat 28088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 364
Target Start/End: Original strand, 3155152 - 3155253
Alignment:
Q  263 aagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||| ||  |||||||  ||||||| ||||||||||| |||| |||||| || | ||||||||||| ||| |||||||| ||||||| ||||||    
T  3155152 aagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct-atggaaataagctgaaaacagcttatagacatgtcataagt 3155250  T
Q  362 tgt 364  Q
    |||    
T  3155251 tgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 360
Target Start/End: Complemental strand, 3168343 - 3168257
Alignment:
Q  275 tctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    ||||||||||| ||||| |  ||||| ||||||||| |||||| |||||||||||||||| ||| ||||  |||||||||| |||||    
T  3168343 tctcatataagctataaactgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 2027500 - 2027396
Alignment:
Q  263 aagtcaaactattctcatataagatataagcattt-tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||||||||| ||||||||  |||||||  || |||||||||| |||| |||  ||||  ||||||||| ||| ||||||||||| |||| |||||     
T  2027500 aagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagcttatggaaatgtcataagc 2027401  T
Q  362 tgttt 366  Q
    |||||    
T  2027400 tgttt 2027396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 2027839 - 2027787
Alignment:
Q  315 gaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||||||||||||| || |||| |||| ||||||| ||||||||||||    
T  2027839 gaacttaaggaaataagctaaaggcagtttattgacatgtcataagttgtttc 2027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 6014511 - 6014619
Alignment:
Q  263 aagtcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||| |||||||||||| || ||||| |  |||| ||||| |||| || ||||| || |||||||| || ||| ||||||||| || ||| ||||||    
T  6014511 aagtcaacctattctcatattagttataaactgtttccataagttatcttgaagaacctatggaaataatctcaaaacagcttatgcacctgtcataagt 6014610  T
Q  362 tgtttccat 370  Q
    |||||||||    
T  6014611 tgtttccat 6014619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 9668029 - 9667973
Alignment:
Q  312 ggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    ||||| |||| ||||||||| | ||| |||||||||||||||| |||||||||||||    
T  9668029 ggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttcc 9667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 383
Target Start/End: Complemental strand, 281928 - 281821
Alignment:
Q  277 tcatataagatataagcatt-ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatct 375  Q
    ||||||||| |||||||  | ||||||||||||| | |||| || | ||||||||||| ||| || ||||| ||||||| |||||||| |||||| | ||    
T  281928 tcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagct 281829  T
Q  376 cttccaaa 383  Q
    || |||||    
T  281828 ctcccaaa 281821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 20368241 - 20368170
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||||| || ||||||||||| | ||||||| | |||  |||||||| |||||| |||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttt 20368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 34939755 - 34939826
Alignment:
Q  297 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    ||||||||||||| ||||||  ||| ||||||||||| ||| ||  |||||||||||| ||||| |||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttcc 34939826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 1019643 - 1019597
Alignment:
Q  323 ggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    ||||||||||| ||| || ||||| ||||||||||||||||||||||    
T  1019643 ggaaataagctaaaaacaacttatagacatgttataagttgtttcca 1019597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 3528777 - 3528883
Alignment:
Q  261 cgaagtcaaactattctcatataagatata-agcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    |||||||||||| |||||||||||  |||| | | ||||||| | ||||| |||||| |||| | ||||||| | ||| ||  |||||||||||| ||||    
T  3528777 cgaagtcaaacttttctcatataaattatagaccgttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataa 3528876  T
Q  360 gttgttt 366  Q
    |||||||    
T  3528877 gttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 369
Target Start/End: Original strand, 4246419 - 4246493
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    |||||||||||||| ||||||| | ||   ||||||| | ||| |||||||||||||||| || |||||||||||    
T  4246419 ttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttcca 4246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 368
Target Start/End: Original strand, 33301697 - 33301787
Alignment:
Q  278 catataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    |||| ||| ||||||| |||||||| ||||||||||  | |||||| ||||||||| ||| ||||||| | ||| |  |||||||||||||    
T  33301697 catacaagctataagctttttcatatgctatcatgggtagcttaagcaaataagctgaaaacagcttaagaacacgacataagttgtttcc 33301787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 367
Target Start/End: Original strand, 2117379 - 2117484
Alignment:
Q  263 aagtcaaactattctcatataagatataag-cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    ||||||||||||| ||||||||  ||||||   |||||||||| |||| | |||| ||||  |||||||||| ||| |||||||| ||||||  |||| |    
T  2117379 aagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacatgccataaat 2117478  T
Q  362 tgtttc 367  Q
    ||||||    
T  2117479 tgtttc 2117484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 2460206 - 2460137
Alignment:
Q  301 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||| ||||||| |||| ||||||||| | ||| || ||||  ||||||| |||||||||||||||    
T  2460206 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccat 2460137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 3738107 - 3738152
Alignment:
Q  324 gaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    |||||||| | |||||||||||||||||||| ||||| ||||||||    
T  3738107 gaaataagttgaaagcagcttatggacatgtcataagctgtttcca 3738152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 383
Target Start/End: Complemental strand, 10616635 - 10616514
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||| | || |||||||| ||||||||  |||| |||||||||  |||||| ||||   ||||||||| ||  || |||| |||||||| ||||||    
T  10616635 aagtcaaagttttttcatataaaatataagccgttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagt 10616536  T
Q  362 tgtttccatcatctcttccaaa 383  Q
    ||||||||| | |||| |||||    
T  10616535 tgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 30523650 - 30523743
Alignment:
Q  277 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||| ||||||  ||||||||||||||| | ||||  |||  ||||| || | ||| ||||||||| |||||  |||||||||||||||    
T  30523650 tcatataagctataagttttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccat 30523743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 30523948 - 30524017
Alignment:
Q  297 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||| |  ||| |||| ||||||||||| |||||| || |||||||||| |||| ||||||    
T  30523948 ttcataagctatcctaaagagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttt 30524017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 19275697 - 19275633
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    |||||||||||||||||| ||| |||| |||||||| |  ||| |||||| ||||||||| ||||    
T  19275697 ttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 27140487 - 27140560
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    |||| ||||||||||||||||| |||| | ||||||||| ||| || ||||||||||||| ||||| |||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttcc 27140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 360
Target Start/End: Original strand, 44422678 - 44422773
Alignment:
Q  266 tcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    ||||||| || ||||||||| ||||||| ||||| |||||||||| |||||| |||| | |||||||||  |  |||||||||||||||| |||||    
T  44422678 tcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataag 44422773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 383
Target Start/End: Original strand, 4622072 - 4622190
Alignment:
Q  266 tcaaactattctcatataagatataagcattttc-ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 364  Q
    ||||||| || ||||||||| |||||||  |||| ||| |||||| |||||| |||  | ||||||||| ||| |||||||||||||||| ||||| |||    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgt 4622171  T
Q  365 ttccatcatctcttccaaa 383  Q
    | |||| |  |||||||||    
T  4622172 tcccattagatcttccaaa 4622190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 10439661 - 10439783
Alignment:
Q  262 gaagtcaaactattctcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    ||||||||| |||| ||||||||| ||| ||| || |||| || ||||| ||||||  ||| ||||||||||| ||||||| |||||||||||| |||      
T  10439661 gaagtcaaattattttcatataagctatcagctatattcaaaaactatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagt 10439760  T
Q  361 ttgtttccatcatctcttccaaa 383  Q
    |||||| ||| | |||| |||||    
T  10439761 ttgttttcataagctctcccaaa 10439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 12477381 - 12477283
Alignment:
Q  263 aagtcaaactattctcatataagatataagcattttca-taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||||||||| || |||| ||||||||| || |||| | ||||||||||||||||   || ||||||||||| ||| || ||||||||||||| |||||    
T  12477381 aagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 35080130 - 35080060
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 365  Q
    ||||||| |||||||||||||| |||   |||||||||| ||| ||||||||| |||||| ||||||||||    
T  35080130 ttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttgtt 35080060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 12564560 - 12564495
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| ||| ||| |||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataag 12564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 39777672 - 39777741
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 364  Q
    ||||| |||| ||| ||| ||| |||||||||||||||| ||| || |||||||||||||||||| ||||    
T  39777672 ttttcttaagttataatgaagagcttaaggaaataagctaaaaacatcttatggacatgttataaattgt 39777741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 4699677 - 4699605
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||||| |||||  ||||| ||||  |||||||||| ||| ||||||||| |||||| |||||||||||    
T  4699677 attttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttt 4699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 366
Target Start/End: Original strand, 17778957 - 17779037
Alignment:
Q  287 tataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    |||||||| ||||||||||||||| ||||||| ||  ||||||||| | ||| ||| ||||| ||| ||||||||||||||    
T  17778957 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgttt 17779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 19412635 - 19412583
Alignment:
Q  318 cttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||| ||||||||||  ||| |||||||||||||||| |||||||||||||||    
T  19412635 cttatggaaataagccaaaatcagcttatggacatgtcataagttgtttccat 19412583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 30014139 - 30014067
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    ||||||||||||||  | ||||||||| ||||||||||| ||| | |||  ||||||||| ||||||||||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaaccgctattggacatgtcataagttgtttc 30014067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 2294905 - 2294976
Alignment:
Q  281 ataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggaca 351  Q
    ||||| ||||||| |||||||||| ||||| ||||||||||| | ||||||| | ||| |||||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatggaca 2294976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 4548730 - 4548805
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| |||||| ||| || ||||||||| ||| || ||||  | ||||| |||||||||||||||    
T  4548730 ttttcataagctatcttggagagcttcagaaaataagctaaaaacaacttacaggcatgtcataagttgtttccat 4548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 6231877 - 6231802
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||| ||||||| | || ||||||||  |||||||||| ||| ||| |||||||||||| || ||||||||||||    
T  6231877 ttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccat 6231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 15437972 - 15438047
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||| |||||| | ||||  ||| ||||||||||| |||| | |||||| |||||| |||||||||||||||    
T  15437972 ttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttccat 15438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 15581292 - 15581351
Alignment:
Q  324 gaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 383  Q
    |||||| ||| ||| |||||||| ||||||| ||||||||||||||| | ||||||||||    
T  15581292 gaaataggctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaa 15581351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 17628636 - 17628683
Alignment:
Q  323 ggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||| ||| ||| |||||||||||||||| |||||||||||||||    
T  17628636 ggaaatatgctgaaaacagcttatggacatgtcataagttgtttccat 17628683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 26184759 - 26184830
Alignment:
Q  297 ttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    |||||||  |||| |||||| |||| |||||||| || ||| |||||||||||||||| ||||| |||||||    
T  26184759 ttcataaattatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgtttcc 26184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 28262680 - 28262613
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 362  Q
    |||||||||| |||| |  |||||||| ||||||||||| ||| ||  ||||||||||||||||||||    
T  28262680 ttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacatgttataagtt 28262613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 35925703 - 35925770
Alignment:
Q  299 cataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgttt 366  Q
    ||||||||||||||||||  ||| ||||||||| | ||| ||||||||| |||||| ||||| |||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 39270519 - 39270428
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatg 353  Q
    ||||||||| ||  |||||||||||||||||  ||||||||||||| ||| |||| | || | ||||||| | ||| |||||||||||||||    
T  39270519 aagtcaaacaatcttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatg 39270428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 11211108 - 11211194
Alignment:
Q  277 tcatataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 362  Q
    |||||||||||| || | ||||||||||||| | |||||||  ||| ||||||||| | ||| || |||||||||||| ||||||||    
T  11211108 tcatataagataaaaactattttcataagctgttatggagagtttatggaaataagttaaaaacaacttatggacatgctataagtt 11211194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 14630044 - 14629970
Alignment:
Q  279 atataagatataagc-attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacat 352  Q
    ||||||| ||||||| |||||||||||||||| ||||||  ||| ||||||||||| ||| || |||||| ||||    
T  14630044 atataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacat 14629970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 15942827 - 15942737
Alignment:
Q  277 tcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagca-gcttatggacatgttataagttgttt 366  Q
    ||||||| |||||||   |||||||||  |||| |||||||||||  |||||||||| ||| || ||||||| |||||| |||||||||||    
T  15942827 tcatatatgatataactgttttcataatttatcttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttt 15942737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 16322826 - 16322940
Alignment:
Q  264 agtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 362  Q
    |||||||||||| ||||| ||| |||||||  |||||||| |||||  || ||| |||| ||||||||||| ||| || ||||||  ||||  |||||||    
T  16322826 agtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatgtgcatgacataagtt 16322925  T
Q  363 gtttccatcatctct 377  Q
    ||||| || ||||||    
T  16322926 gtttcgataatctct 16322940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 27963431 - 27963361
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtt 365  Q
    |||||||||||||| ||||||| ||||   ||||||||| ||| || ||||||||||||| ||||| ||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtt 27963361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 47960715 - 47960629
Alignment:
Q  266 tcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagc-ttaaagcagcttatggac 350  Q
    |||||||||| ||||||||| |||||||  |||||||||| |||| || ||| ||| ||||||||||| | ||| ||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagcttgaggaaataagcataaaaacagcttatggac 47960629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 16981994 - 16981933
Alignment:
Q  298 tcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataa 359  Q
    ||||||||||||||||||| ||||   ||||||||| ||| || ||||||||||||| ||||    
T  16981994 tcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 35179148 - 35179201
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatgg 348  Q
    |||||||||| ||| |||||||||||| | ||||||||| ||| ||||||||||    
T  35179148 ttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 35590952 - 35590915
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagct 333  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagct 35590915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 43338123 - 43338200
Alignment:
Q  293 cattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| |||||||| |||| | ||||| ||| |||  || ||||| |||||| ||||| |||||||||    
T  43338123 cattttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgtttccat 43338200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 52190138 - 52190203
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataag 360  Q
    |||||||||||||||||||||| |||| | ||||||||| ||| | |||| ||||| ||| |||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataag 52190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 2522703 - 2522739
Alignment:
Q  399 aagtgtttatgccagtaggtaaactcaaataaatcaa 435  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  2522703 aagtgtttatgccagtagataaactcaaataagtcaa 2522739  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 4078242 - 4078162
Alignment:
Q  264 agtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagct 343  Q
    |||||||||||| ||||||||  ||||||   ||||||||||||||||||| || || | | ||||||||| |||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaataagctgaaagcagct 4078162  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 5047155 - 5047207
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||| |||| ||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatg 5047207  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 383
Target Start/End: Original strand, 6262715 - 6262835
Alignment:
Q  263 aagtcaaactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 362  Q
    ||||||||||||| | ||||||| ||||||| |||| || |||| | || ||||  | |  |||||||||||||| || ||||||||||| | |||||||    
T  6262715 aagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatatcataagtt 6262814  T
Q  363 gtttccatcatctcttccaaa 383  Q
     ||| ||| | |||| |||||    
T  6262815 attttcataagctctcccaaa 6262835  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 6279407 - 6279467
Alignment:
Q  294 attttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 354  Q
    |||||||||||||||| | |||| |||| ||||||| ||| ||| || |||||||||||||    
T  6279407 attttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 15579497 - 15579565
Alignment:
Q  301 taagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcca 369  Q
    ||||||||||||  ||  ||| ||||||||||| | | || ||||||||||||| ||||||||||||||    
T  15579497 taagctatcatgttgagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttcca 15579565  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 28689508 - 28689440
Alignment:
Q  300 ataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttcc 368  Q
    |||||||||| |||| | |||| | ||||||||| ||| || ||||||||||||| ||||| |||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttcc 28689440  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 29834966 - 29834894
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 367  Q
    |||||||||||||||||| ||| |||| ||||||||  | |||  |||||||||||| ||  |||||||||||    
T  29834966 ttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgtttc 29834894  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 37593744 - 37593676
Alignment:
Q  296 tttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgt 364  Q
    |||||||||||||  || ||| |||| | ||||||||| ||| ||||||||| |||||| |||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 45205044 - 45205148
Alignment:
Q  263 aagtcaaactattctcatataagatataagca-ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 361  Q
    |||||||||||||  |||||||| || |||   |||||||||||||||||| |||  | | ||||||||||| ||| || |||| |||||| | ||||||    
T  45205044 aagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatcataagt 45205143  T
Q  362 tgttt 366  Q
    |||||    
T  45205144 tgttt 45205148  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 45975699 - 45975751
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatg 347  Q
    ||||||||||||||| ||||||| ||| | ||||||||| ||| |||||||||    
T  45975699 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 51695556 - 51695484
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggac-atgttataagttgttt 366  Q
    ||||||||||||||| ||||||| ||| | ||||||||| |||  |||||||| || |||| |||||||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgttt 51695484  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 306335 - 306410
Alignment:
Q  295 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    ||||||||||||||| | |||| |||| | || |||||| ||| |||||||||| ||||| ||||| |||||||||    
T  306335 ttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccat 306410  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 12758 - 12690
Alignment:
Q  302 aagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccat 370  Q
    |||||||| | |||| |||| |||  |||||| ||| || ||||||||||||| |||||||||||||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccat 12690  T

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