View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21319_high_16 (Length: 360)

Name: NF21319_high_16
Description: NF21319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21319_high_16
NF21319_high_16
[»] chr8 (43 HSPs)
chr8 (62-329)||(3962618-3962882)
chr8 (282-336)||(14279578-14279632)
chr8 (285-326)||(43778022-43778063)
chr8 (277-336)||(10982721-10982780)
chr8 (282-336)||(8717482-8717536)
chr8 (282-336)||(26886049-26886103)
chr8 (282-326)||(3672633-3672677)
chr8 (282-326)||(6447189-6447233)
chr8 (284-336)||(12800907-12800959)
chr8 (277-325)||(13004160-13004208)
chr8 (282-326)||(17062356-17062400)
chr8 (282-326)||(17585958-17586002)
chr8 (288-336)||(26799190-26799238)
chr8 (282-333)||(10601763-10601814)
chr8 (282-333)||(13286131-13286182)
chr8 (282-337)||(44224202-44224257)
chr8 (28-62)||(3962565-3962599)
chr8 (292-326)||(11479654-11479688)
chr8 (283-329)||(17002353-17002399)
chr8 (282-336)||(26885645-26885699)
chr8 (282-340)||(30694442-30694500)
chr8 (282-336)||(32421569-32421623)
chr8 (282-336)||(37872184-37872238)
chr8 (282-336)||(40795377-40795431)
chr8 (289-326)||(24023829-24023866)
chr8 (289-326)||(32944857-32944894)
chr8 (282-326)||(1877679-1877723)
chr8 (282-326)||(2554229-2554273)
chr8 (282-326)||(6248301-6248345)
chr8 (282-326)||(7553679-7553723)
chr8 (288-336)||(7679908-7679956)
chr8 (282-326)||(10152456-10152500)
chr8 (282-326)||(13357458-13357502)
chr8 (282-326)||(15001292-15001336)
chr8 (282-322)||(16823206-16823246)
chr8 (282-326)||(17898079-17898123)
chr8 (282-333)||(17923076-17923128)
chr8 (288-340)||(30429231-30429282)
chr8 (282-326)||(32555254-32555298)
chr8 (282-326)||(34420879-34420923)
chr8 (288-336)||(37141363-37141411)
chr8 (282-326)||(40512647-40512691)
chr8 (288-340)||(44037368-44037420)
[»] chr4 (35 HSPs)
chr4 (282-336)||(12671755-12671809)
chr4 (282-326)||(2430997-2431041)
chr4 (282-326)||(7030910-7030954)
chr4 (282-326)||(24885817-24885861)
chr4 (282-326)||(36662386-36662430)
chr4 (282-326)||(51002287-51002331)
chr4 (282-336)||(28435255-28435309)
chr4 (282-336)||(35021474-35021528)
chr4 (282-322)||(38340341-38340381)
chr4 (282-326)||(49021766-49021810)
chr4 (282-326)||(51458678-51458722)
chr4 (282-325)||(32180830-32180873)
chr4 (282-332)||(1737161-1737211)
chr4 (282-336)||(9946427-9946481)
chr4 (282-336)||(10303518-10303572)
chr4 (282-336)||(19854565-19854619)
chr4 (282-316)||(21935012-21935046)
chr4 (282-336)||(43722765-43722819)
chr4 (282-336)||(47490714-47490768)
chr4 (283-336)||(17423184-17423237)
chr4 (293-326)||(23318378-23318411)
chr4 (289-342)||(42773059-42773112)
chr4 (282-322)||(10564486-10564526)
chr4 (282-326)||(19124639-19124683)
chr4 (282-326)||(21052574-21052618)
chr4 (288-336)||(23225871-23225919)
chr4 (282-310)||(23626381-23626409)
chr4 (289-337)||(25101396-25101444)
chr4 (292-332)||(27740750-27740790)
chr4 (282-326)||(30847999-30848043)
chr4 (288-336)||(33495571-33495619)
chr4 (282-326)||(43034359-43034403)
chr4 (288-328)||(47537461-47537501)
chr4 (282-342)||(50774573-50774633)
chr4 (282-326)||(56204947-56204991)
[»] chr2 (22 HSPs)
chr2 (282-329)||(30762509-30762556)
chr2 (282-326)||(41859852-41859896)
chr2 (282-336)||(9964491-9964545)
chr2 (283-336)||(16221353-16221406)
chr2 (282-326)||(9686457-9686501)
chr2 (282-326)||(17779009-17779053)
chr2 (292-332)||(23756722-23756762)
chr2 (282-326)||(42475127-42475171)
chr2 (282-341)||(22523014-22523073)
chr2 (282-336)||(20990911-20990965)
chr2 (282-340)||(34977204-34977262)
chr2 (282-336)||(37320524-37320578)
chr2 (288-326)||(42200693-42200731)
chr2 (287-340)||(145014-145067)
chr2 (282-315)||(15447748-15447781)
chr2 (282-326)||(2256971-2257015)
chr2 (282-322)||(8761585-8761625)
chr2 (288-336)||(13196706-13196754)
chr2 (282-326)||(22558977-22559021)
chr2 (282-322)||(24548117-24548157)
chr2 (282-326)||(34464426-34464470)
chr2 (288-336)||(44694694-44694742)
[»] scaffold0021 (1 HSPs)
scaffold0021 (282-336)||(161141-161195)
[»] chr5 (31 HSPs)
chr5 (282-336)||(11637579-11637633)
chr5 (282-336)||(20175827-20175881)
chr5 (282-335)||(34206227-34206280)
chr5 (282-336)||(3156534-3156588)
chr5 (283-336)||(31159430-31159483)
chr5 (282-326)||(18489093-18489137)
chr5 (292-336)||(18789046-18789090)
chr5 (288-336)||(20721056-20721104)
chr5 (282-326)||(35109400-35109444)
chr5 (288-336)||(38495148-38495196)
chr5 (288-336)||(40837910-40837958)
chr5 (283-341)||(1488365-1488424)
chr5 (282-337)||(10032280-10032335)
chr5 (282-341)||(20927639-20927698)
chr5 (283-326)||(32271436-32271479)
chr5 (282-336)||(6237726-6237780)
chr5 (282-336)||(10704338-10704392)
chr5 (282-336)||(13864344-13864398)
chr5 (282-328)||(17046334-17046380)
chr5 (282-340)||(18589870-18589928)
chr5 (283-337)||(25385053-25385107)
chr5 (282-324)||(35610011-35610053)
chr5 (288-336)||(5246163-5246211)
chr5 (288-340)||(14140843-14140895)
chr5 (282-326)||(22555231-22555275)
chr5 (282-326)||(28207132-28207176)
chr5 (282-326)||(29178447-29178491)
chr5 (288-332)||(35131121-35131165)
chr5 (285-325)||(41344579-41344619)
chr5 (282-326)||(41650956-41651000)
chr5 (276-336)||(43108563-43108623)
[»] chr3 (37 HSPs)
chr3 (282-340)||(14827525-14827583)
chr3 (282-336)||(32484278-32484332)
chr3 (282-326)||(7824807-7824851)
chr3 (288-325)||(46051914-46051951)
chr3 (288-336)||(1743997-1744045)
chr3 (282-336)||(334854-334909)
chr3 (282-325)||(52535883-52535926)
chr3 (282-336)||(7738669-7738723)
chr3 (282-336)||(8127463-8127517)
chr3 (282-336)||(10922315-10922369)
chr3 (282-336)||(17262178-17262231)
chr3 (282-328)||(19883087-19883133)
chr3 (282-336)||(25340931-25340985)
chr3 (282-336)||(28244111-28244165)
chr3 (282-336)||(32629080-32629134)
chr3 (282-336)||(38130966-38131020)
chr3 (282-336)||(39481141-39481195)
chr3 (283-333)||(39552465-39552515)
chr3 (282-336)||(44579636-44579690)
chr3 (282-328)||(51882215-51882261)
chr3 (288-330)||(55010113-55010155)
chr3 (293-326)||(665976-666009)
chr3 (288-333)||(7300778-7300823)
chr3 (283-328)||(43815517-43815562)
chr3 (288-341)||(54018408-54018461)
chr3 (288-336)||(2078246-2078294)
chr3 (292-336)||(8831352-8831396)
chr3 (282-326)||(19468451-19468495)
chr3 (282-326)||(21506775-21506819)
chr3 (282-326)||(26768401-26768445)
chr3 (282-326)||(27397629-27397673)
chr3 (282-326)||(28093354-28093398)
chr3 (282-326)||(30912833-30912877)
chr3 (282-326)||(32909318-32909362)
chr3 (282-326)||(43345024-43345068)
chr3 (288-328)||(44968183-44968223)
chr3 (285-325)||(47185822-47185862)
[»] chr1 (37 HSPs)
chr1 (283-336)||(28016197-28016250)
chr1 (282-326)||(29233991-29234035)
chr1 (282-329)||(8153135-8153182)
chr1 (282-336)||(1091179-1091233)
chr1 (282-332)||(51046142-51046192)
chr1 (292-336)||(7616833-7616877)
chr1 (282-326)||(24978244-24978288)
chr1 (282-326)||(29506827-29506871)
chr1 (282-322)||(30895334-30895374)
chr1 (282-326)||(43545867-43545911)
chr1 (282-333)||(11014232-11014283)
chr1 (282-325)||(29935983-29936026)
chr1 (288-331)||(40675658-40675701)
chr1 (282-341)||(52043273-52043332)
chr1 (282-336)||(2613722-2613776)
chr1 (282-336)||(24695559-24695613)
chr1 (282-336)||(34521197-34521251)
chr1 (282-336)||(42888575-42888629)
chr1 (282-328)||(43840340-43840386)
chr1 (282-336)||(48100722-48100776)
chr1 (282-327)||(40618910-40618955)
chr1 (292-341)||(44678019-44678068)
chr1 (282-326)||(584090-584134)
chr1 (282-322)||(11410627-11410667)
chr1 (282-326)||(17651397-17651441)
chr1 (282-322)||(21041344-21041384)
chr1 (282-326)||(25086483-25086527)
chr1 (282-326)||(27172739-27172783)
chr1 (282-333)||(29450991-29451043)
chr1 (285-341)||(30433510-30433566)
chr1 (282-326)||(32950778-32950822)
chr1 (282-326)||(34877671-34877715)
chr1 (282-322)||(43611424-43611464)
chr1 (292-332)||(44718069-44718109)
chr1 (282-326)||(49183173-49183217)
chr1 (282-326)||(52267764-52267808)
chr1 (282-326)||(52441528-52441572)
[»] chr7 (35 HSPs)
chr7 (280-336)||(19599143-19599199)
chr7 (284-328)||(32862097-32862141)
chr7 (282-333)||(8879757-8879808)
chr7 (282-337)||(30463377-30463432)
chr7 (277-336)||(44718820-44718879)
chr7 (282-326)||(21993182-21993226)
chr7 (282-330)||(22267581-22267629)
chr7 (282-322)||(24839488-24839528)
chr7 (282-329)||(10029839-10029886)
chr7 (282-336)||(19793804-19793859)
chr7 (282-325)||(23198767-23198810)
chr7 (282-325)||(33897966-33898009)
chr7 (282-337)||(39706620-39706675)
chr7 (285-336)||(45425456-45425507)
chr7 (282-328)||(3672567-3672613)
chr7 (282-328)||(8683070-8683116)
chr7 (282-336)||(19416514-19416568)
chr7 (282-336)||(25246771-25246825)
chr7 (283-325)||(44106629-44106671)
chr7 (282-336)||(48103681-48103735)
chr7 (282-327)||(3948054-3948099)
chr7 (282-335)||(39801706-39801759)
chr7 (282-326)||(1399162-1399206)
chr7 (282-322)||(2450580-2450620)
chr7 (288-336)||(8261450-8261498)
chr7 (282-326)||(10025994-10026038)
chr7 (282-326)||(19578154-19578198)
chr7 (282-326)||(22991408-22991452)
chr7 (288-332)||(27263347-27263391)
chr7 (288-332)||(27270241-27270285)
chr7 (282-326)||(27993046-27993090)
chr7 (282-326)||(36428148-36428192)
chr7 (282-326)||(44454512-44454556)
chr7 (282-326)||(44558791-44558835)
chr7 (292-336)||(47342687-47342731)
[»] chr6 (16 HSPs)
chr6 (282-326)||(1918475-1918519)
chr6 (282-326)||(2108725-2108769)
chr6 (282-337)||(24269883-24269938)
chr6 (282-336)||(8569709-8569763)
chr6 (282-316)||(27928136-27928170)
chr6 (288-321)||(5271399-5271432)
chr6 (282-326)||(331903-331947)
chr6 (288-336)||(2726424-2726472)
chr6 (282-318)||(7342166-7342202)
chr6 (282-326)||(7885541-7885585)
chr6 (282-326)||(8381211-8381255)
chr6 (282-326)||(8810640-8810684)
chr6 (282-326)||(21373423-21373467)
chr6 (288-340)||(21598963-21599015)
chr6 (282-326)||(24373727-24373771)
chr6 (282-326)||(26320580-26320624)
[»] scaffold0086 (1 HSPs)
scaffold0086 (282-328)||(19070-19116)
[»] scaffold0011 (2 HSPs)
scaffold0011 (282-336)||(185263-185317)
scaffold0011 (282-328)||(223158-223204)
[»] scaffold0024 (1 HSPs)
scaffold0024 (284-325)||(104558-104599)
[»] scaffold1160 (1 HSPs)
scaffold1160 (285-337)||(1718-1770)
[»] scaffold0118 (1 HSPs)
scaffold0118 (282-337)||(45412-45467)
[»] scaffold0735 (1 HSPs)
scaffold0735 (282-336)||(1528-1582)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-326)||(47258-47307)
[»] scaffold0896 (1 HSPs)
scaffold0896 (282-326)||(3141-3185)
[»] scaffold0197 (1 HSPs)
scaffold0197 (282-326)||(21772-21816)
[»] scaffold0154 (1 HSPs)
scaffold0154 (282-326)||(10774-10818)
[»] scaffold0122 (2 HSPs)
scaffold0122 (282-326)||(14203-14247)
scaffold0122 (284-328)||(31170-31214)


Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 62 - 329
Target Start/End: Original strand, 3962618 - 3962882
Alignment:
Q  62 ggtggttggtgtataacctctcattttaaatgttagaagtcccatatagaatactttagagagtttttgagcctttatacacattaatgggtaaaacatg 161  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  3962618 ggtggtcggtgtataatctctcattttaaatgatagaagtcccacatagaatactttagagagtttttgagcctttatatacatcaatggggaaaacatg 3962717  T
Q  162 attgtagaaaagttgatagatagaatttattgtggattaaaaatatgtttgtattaatgtacaaaaagttcaatctctccaacctttcttttttaatgaa 261  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  3962718 atcgtagaaaagttgatagatagaatttattgtggattaaaaatatgtttgtattaatggacaaaaagttcaatctgtccaacctttcttttttaatgaa 3962817  T
Q  262 aaaattggcattgaattttggtgagtttaactcagttggtatagacaatacataaaatatgcaagatt 329  Q
    ||||||||||||||||||||||||||||| ||||   | |||||| ||| ||||||||||| ||||||    
T  3962818 aaaattggcattgaattttggtgagtttagctca---gctatagataatgcataaaatatgtaagatt 3962882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 14279632 - 14279578
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  14279632 gtgagtttaactcagttggtatagacaatgcataaaatatgcaaggttcggggtt 14279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 43778022 - 43778063
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  43778022 agtttaactcagttggtatagacaatgcataaaatatgcaag 43778063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 10982721 - 10982780
Alignment:
Q  277 ttttggtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| ||||| |||||||||||||||| ||||||| |||| ||||||||| |||||||||    
T  10982721 ttttcgtgagcttaactcagttggtatggacaatatataatatatgcaaggttcggggtt 10982780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 8717536 - 8717482
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||| |||||||||    
T  8717536 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggtt 8717482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 26886103 - 26886049
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||| ||||||||| |||||| ||||||||||| ||||| |||||||    
T  26886103 gtgagtttaacttagttggtatggacaatgcataaaatatgtaagatccggggtt 26886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 3672677 - 3672633
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||    
T  3672677 gtgagtttaactcagttggttgagacaatgcataaaatatgcaag 3672633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 6447189 - 6447233
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||    
T  6447189 gtgagtttaactcagttggtatggacaatgcataatatatgcaag 6447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 12800959 - 12800907
Alignment:
Q  284 gagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||| ||||||||||| |||||||||||| ||||||||| | |||||||    
T  12800959 gagtttaattcagttggtatggacaatacataatatatgcaaggtccggggtt 12800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 13004160 - 13004208
Alignment:
Q  277 ttttggtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    |||| ||||| |||||||||||||||| |||||| ||||||||||||||    
T  13004160 ttttcgtgagcttaactcagttggtatggacaatgcataaaatatgcaa 13004208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 17062400 - 17062356
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||    
T  17062400 gtgagcttaactcagttgatatagacaatacataatatatgcaag 17062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 17585958 - 17586002
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||    
T  17585958 gtgagcttaactcagttgatatagacaatacataatatatgcaag 17586002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 26799190 - 26799238
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  26799190 ttaactcagttggtagggacaatgcataaaatatgcaaggttcggggtt 26799238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 10601763 - 10601814
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    ||||| |||| ||||||||||| |||||| ||||| ||||||||||||||||    
T  10601763 gtgagcttaattcagttggtatggacaatgcataatatatgcaagattcggg 10601814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 13286131 - 13286182
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  13286131 gtgagcttagctcagttggtatagacaatgcataatatatgcaagatccggg 13286182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 44224257 - 44224202
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| |||||||| |||||||||| |||| |||||||||||||| || |||||||    
T  44224257 gtgagcttaactcaattggtatagataatatataaaatatgcaagttttggggttt 44224202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 3962565 - 3962599
Alignment:
Q  28 ttattgttaaaaatgccacacaattgtggtatagg 62  Q
    |||||||||||||||||||||||| ||||||||||    
T  3962565 ttattgttaaaaatgccacacaatggtggtatagg 3962599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 326
Target Start/End: Complemental strand, 11479688 - 11479654
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||| |||||||||||||||    
T  11479688 ctcagttggtatagacaatgcataaaatatgcaag 11479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 17002399 - 17002353
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagatt 329  Q
    |||| ||| |||||||| |||||||||| ||||||||||||||||||    
T  17002399 tgagattagctcagttgatatagacaatgcataaaatatgcaagatt 17002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 26885699 - 26885645
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| ||||||||||||  ||||| ||||||||||| ||||| |||||||    
T  26885699 gtgagtttagctcagttggtatgaacaatgcataaaatatgtaagatccggggtt 26885645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 30694500 - 30694442
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||| ||| ||||||| ||||  ||||| ||||||||||||||| |||||||||||||    
T  30694500 gtgagcttatctcagtttgtatgaacaatgcataaaatatgcaaggttcggggtttaaa 30694442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 32421569 - 32421623
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||| ||||||| |||| ||||||||| | |||||||    
T  32421569 gtgagcttaactcagttggtatggacaatatataatatatgcaaggtccggggtt 32421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 37872184 - 37872238
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||| ||| |||||||||||||||||||||||||| || ||||||    
T  37872184 gtgagcttagctcaattgctatagacaatacataaaatatgcaaggtttggggtt 37872238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 40795377 - 40795431
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||||| | |||||||    
T  40795377 gtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggtt 40795431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 24023866 - 24023829
Alignment:
Q  289 taactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  24023866 taactcagttggtatggacaatgcataaaatatgcaag 24023829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 32944894 - 32944857
Alignment:
Q  289 taactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  32944894 taactcagttggtatggacaatgcataaaatatgcaag 32944857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 1877723 - 1877679
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||| |||||||||| ||||| |||||||||    
T  1877723 gtgagcttaactcagttgatatagacaatgcataatatatgcaag 1877679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 2554273 - 2554229
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  2554273 gtgagcttagctcagttgatatggacaatacataaaatatgcaag 2554229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 6248301 - 6248345
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||| |||| || |||||||| |||||||||    
T  6248301 gtgagtttaactcagttgatatatacgatacataatatatgcaag 6248345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 7553679 - 7553723
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||  |||||| ||||| |||||||||    
T  7553679 gtgagtttaactcagttggtagggacaatgcataatatatgcaag 7553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 7679908 - 7679956
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||| | ||||||| ||||| ||||||||| |||||||||    
T  7679908 ttaactcagttggcaaagacaatgcataatatatgcaaggttcggggtt 7679956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 10152456 - 10152500
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||||||||||  ||||||||||||||    
T  10152456 gtgagcttagctcagttggtatagacaatgtataaaatatgcaag 10152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 13357502 - 13357458
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  13357502 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 13357458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 15001336 - 15001292
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||| | |||||| |||||||||||||||    
T  15001336 gtgagcttaactcagttggtttcgacaatgcataaaatatgcaag 15001292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 16823246 - 16823206
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| |||||||||||||||||||| |||||||| |||||    
T  16823246 gtgagcttaactcagttggtatagactatacataatatatg 16823206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 17898079 - 17898123
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| ||||| |||||| |||||||||    
T  17898079 gtgagcttaactcagttggtatggacaaaacataatatatgcaag 17898123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 17923076 - 17923128
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacat-aaaatatgcaagattcggg 333  Q
    ||||||||||||||||| |||| |||||| ||| ||||||| |||||||||||    
T  17923076 gtgagtttaactcagtttgtatggacaatgcataaaaatatacaagattcggg 17923128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 30429231 - 30429282
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||||||||||||  | |||||| |||||||||||||| |||||||||||||    
T  30429231 ttaactcagttggttga-acaatatataaaatatgcaaggttcggggtttaaa 30429282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 32555254 - 32555298
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| || ||||||||| |||||| |||||||||||||||    
T  32555254 gtgagtttagcttagttggtatggacaatgcataaaatatgcaag 32555298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 34420923 - 34420879
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||| ||||||| |||||| |||||||||||||||    
T  34420923 gtgagcttaactcaattggtatggacaatgcataaaatatgcaag 34420879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 37141363 - 37141411
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| ||||||||||| |||||| ||||| ||||||||| |||||||||    
T  37141363 ttaattcagttggtatggacaatgcataatatatgcaaggttcggggtt 37141411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 40512691 - 40512647
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||| ||||||||||||| |||| ||||    
T  40512691 gtgagcttaactcagttggtagagacaatacataatatatacaag 40512647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 44037420 - 44037368
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||||||||||||||  ||||| ||||| |||| |||||||||| |||||||    
T  44037420 ttaactcagttggtatgaacaatgcataatatatacaagattcggtgtttaaa 44037368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 12671809 - 12671755
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  12671809 gtgagtttagctcagttggtatagacaatgcataaaatatgcaagatccggggtt 12671755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 2430997 - 2431041
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  2430997 gtgagtttagctcagttggtattgacaatacataaaatatgcaag 2431041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 7030954 - 7030910
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  7030954 gtgagcttaactcagttggtatagacaatgcataaaatatgcaag 7030910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 24885861 - 24885817
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  24885861 gtgagcttaactcagttggtatggacaatacataaaatatgcaag 24885817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 36662430 - 36662386
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||    
T  36662430 gtgagtttaactcagttggtatagacaatgcataaaatatacaag 36662386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 51002287 - 51002331
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  51002287 gtgagcttaactcagttggtatagacaatgcataaaatatgcaag 51002331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 28435309 - 28435255
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||| |||||||||    
T  28435309 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggtt 28435255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 35021528 - 35021474
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||| ||| |||||||||||||||||||||| |||||||||    
T  35021528 gtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggtt 35021474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 38340381 - 38340341
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  38340381 gtgagcttaactcagttggtatggacaatacataaaatatg 38340341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 49021766 - 49021810
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||    
T  49021766 gtgagtttagcgcagttggtatggacaatacataaaatatgcaag 49021810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 51458678 - 51458722
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||    
T  51458678 gtgagcttagctcagttggtatggacaatacataaaatatgcaag 51458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 32180830 - 32180873
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||    
T  32180830 gtgagcttagctcagttggtatagacaatgcataaaatatgcaa 32180873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 1737161 - 1737211
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||| |||||||||||||||  ||||||| ||||||||||||||| |||||    
T  1737161 gtgaatttaactcagttggttaagacaatgcataaaatatgcaaggttcgg 1737211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 9946427 - 9946481
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  9946427 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 9946481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10303572 - 10303518
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||  |||||| ||||||||||||||||| |||||||    
T  10303572 gtgagcttagctcagttggtaaggacaatgcataaaatatgcaagatccggggtt 10303518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 19854565 - 19854619
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||| ||||||||||| |||||||    
T  19854565 gtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggtt 19854619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 21935012 - 21935046
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataa 316  Q
    ||||||||||||||||||||||||||||| |||||    
T  21935012 gtgagtttaactcagttggtatagacaatgcataa 21935046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 43722765 - 43722819
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||| |||||| ||||| ||||| ||| | |||||||    
T  43722765 gtgagtttaactcagttggtatggacaatgcataatatatgtaaggtccggggtt 43722819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 47490768 - 47490714
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||| || ||| | ||||||||||||| ||| |||||    
T  47490768 gtgagtttaactcagttggtatggataatgcgtaaaatatgcaaggttccgggtt 47490714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 17423237 - 17423184
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||| | |||||||    
T  17423237 tgaggttaactcagttggtagagacaatgcataatatatgcaaggtccggggtt 17423184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 23318378 - 23318411
Alignment:
Q  293 tcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||| |||||||||||||||    
T  23318378 tcagttggtatagacaatgcataaaatatgcaag 23318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 42773059 - 42773112
Alignment:
Q  289 taactcagttggtatagacaatacataaaatatgcaagattcggggtttaaatt 342  Q
    ||||||||||| ||| |||||||||||||||||| ||| ||||| ||| |||||    
T  42773059 taactcagttgatatggacaatacataaaatatgtaaggttcggtgttcaaatt 42773112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 10564526 - 10564486
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||||||| |||||||||||| |||||||||||| |||||    
T  10564526 gtgagtttagctcagttggtatggacaatacataatatatg 10564486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 19124683 - 19124639
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||| || ||||||||||||| |||||||||    
T  19124683 gtgagcttaactcagttgataaagacaatacataatatatgcaag 19124639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 21052618 - 21052574
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  21052618 gtgagtttagctcagttggtatggataatacataatatatgcaag 21052574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 23225871 - 23225919
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||   ||||| ||||| |||||||||||||||||||    
T  23225871 ttaactcagttggtaggaacaattcataatatatgcaagattcggggtt 23225919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 310
Target Start/End: Original strand, 23626381 - 23626409
Alignment:
Q  282 gtgagtttaactcagttggtatagacaat 310  Q
    |||||||||||||||||||||||||||||    
T  23626381 gtgagtttaactcagttggtatagacaat 23626409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 25101444 - 25101396
Alignment:
Q  289 taactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||||| ||||||| |||||| |||||||||||||||  |||||||||    
T  25101444 taactcaattggtatggacaatgcataaaatatgcaagggtcggggttt 25101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 27740750 - 27740790
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||| |||||||||| ||||||||||||||| |||||    
T  27740750 ctcagttgatatagacaatgcataaaatatgcaaggttcgg 27740790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 30848043 - 30847999
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||| | |||||| |||||||||||||||    
T  30848043 gtgagcttaactcagttggtttggacaatgcataaaatatgcaag 30847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 33495571 - 33495619
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||| |||||||||  ||||||||||| ||||||||||||| |||||    
T  33495571 ttaacttagttggtatgaacaatacataatatatgcaagattcagggtt 33495619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 43034403 - 43034359
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  43034403 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 43034359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 47537501 - 47537461
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||||||||||||||| ||||| |||||||||| ||||||    
T  47537501 ttaactcagttggtataaacaatgcataaaatatacaagat 47537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 50774573 - 50774633
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaatt 342  Q
    ||||| ||| |||| |||||||| |||||||||||||||| |||||||  ||||| |||||    
T  50774573 gtgagcttagctcaattggtataaacaatacataaaatatacaagatttagggttcaaatt 50774633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 56204947 - 56204991
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||  |||||| ||||| |||||||||    
T  56204947 gtgagtttaactcagttggtaaggacaatgcataatatatgcaag 56204991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 30762556 - 30762509
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagatt 329  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  30762556 gtgagtttagctcagttggtatagacaatgcataaaatatgcaagatt 30762509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 41859852 - 41859896
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  41859852 gtgagtttaactcagttggtatggacaatgcataaaatatgcaag 41859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 9964491 - 9964545
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||| |||  ||||||| ||| |||||||||||||||||||    
T  9964491 gtgagtttaactcagttgatatgaacaatacgtaatatatgcaagattcggggtt 9964545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 16221406 - 16221353
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||| ||||||||||||  ||||| ||||||||||||||| |||||||||    
T  16221406 tgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggggtt 16221353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 9686457 - 9686501
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||    
T  9686457 gtgaatttagctcagttggtatagacaatacataatatatgcaag 9686501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 17779053 - 17779009
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||    
T  17779053 gtgagtttaactcagttggtagagacaatgcataaaatttgcaag 17779009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 23756722 - 23756762
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  23756722 ctcagttgatatagacaatacataaaatatgcaaggttcgg 23756762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 42475171 - 42475127
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  42475171 gtgagcttaactcagttggtataaacaatgcataaaatatgcaag 42475127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 22523073 - 22523014
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    ||||| ||| |||||||||||| |||||||||||| ||||||||| |||| |||| ||||    
T  22523073 gtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaat 22523014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 20990965 - 20990911
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||||| ||| |||||    
T  20990965 gtgagcttaacttagttgttatagacaatgcataaaatatgcaaggttcagggtt 20990911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 34977204 - 34977262
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||| |||||||||||||||| |||||| ||||| ||||||||| | ||| |||||||    
T  34977204 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggagtttaaa 34977262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 37320578 - 37320524
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||| ||||||| ||||| ||||||||| |||| ||||    
T  37320578 gtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggtt 37320524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 42200693 - 42200731
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  42200693 ttaactcagttggtaaagacaatacataatatatgcaag 42200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 145067 - 145014
Alignment:
Q  287 tttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||||||||||||||| |||||| ||||| ||||| ||| ||| |||||||||    
T  145067 tttaactcagttggtatggacaatgcataatatatgtaaggttcagggtttaaa 145014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 15447781 - 15447748
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacata 315  Q
    ||||||||| ||||||||||||||||||||||||    
T  15447781 gtgagtttagctcagttggtatagacaatacata 15447748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 2256971 - 2257015
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  2256971 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 2257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 8761625 - 8761585
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| |||||||||||||||| |||||||||||| |||||    
T  8761625 gtgagcttaactcagttggtatggacaatacataatatatg 8761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 13196706 - 13196754
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||||||  ||||| ||||| ||||||||| |||||||||    
T  13196706 ttaactcagttggtatgaacaatgcataatatatgcaaggttcggggtt 13196754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 22558977 - 22559021
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||    
T  22558977 gtgagtttaactcagttggtttggacaatgcataaaatatacaag 22559021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 24548117 - 24548157
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  24548117 gtgagtttaactcaattggtatagacaatgcataatatatg 24548157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 34464470 - 34464426
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||| |||||| ||||| |||||||||    
T  34464470 gtgagtttagctcagttggtatggacaatgcataatatatgcaag 34464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 44694694 - 44694742
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||| |||||||||| ||||| |||||||||  ||||||||    
T  44694694 ttaactcagttgatatagacaatgcataatatatgcaaggctcggggtt 44694742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 161141 - 161195
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  161141 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggtt 161195  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 11637633 - 11637579
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  11637633 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggtt 11637579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 20175827 - 20175881
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||| || ||||||| |||||||||||||||||||||||||    
T  20175827 gtgagcttaactcagttgttagagacaatgcataaaatatgcaagattcggggtt 20175881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 34206227 - 34206280
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggt 335  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||    
T  34206227 gtgagtttaactcagttggtaaagacaatgcataatatatgcaaggttcggggt 34206280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 3156534 - 3156588
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||| || ||| ||||||||||| |||||| ||||||    
T  3156534 gtgagtttaactcagttggtatggataatgcataaaatatgtaagatttggggtt 3156588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 31159430 - 31159483
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| |||||||||||| || ||||||||||||| ||||||||||||| |||||    
T  31159430 tgagcttaactcagttgataaagacaatacataatatatgcaagattcagggtt 31159483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 18489137 - 18489093
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||    
T  18489137 gtgagtttagctcagttggtatagacaatgcataatatatgcaag 18489093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 18789046 - 18789090
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||||    
T  18789046 ctcagttggtagagacaatgcataaaatatgcaaggttcggggtt 18789090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 20721056 - 20721104
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||| |||||||||||| ||||||||| | |||||||    
T  20721056 ttaactcagttggtatggacaatacataatatatgcaaggtccggggtt 20721104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 35109400 - 35109444
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  35109400 gtgagcttaactcagttggtaaagacaatacataatatatgcaag 35109444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 38495148 - 38495196
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||| || ||| ||||||||||||||| |||||||||    
T  38495148 ttaactcagttggtatggataatgcataaaatatgcaaggttcggggtt 38495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 40837958 - 40837910
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||| ||||||| |||||||||||||| | |||||||    
T  40837958 ttaactcagttggtatggacaatatataaaatatgcaaggtccggggtt 40837910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 1488365 - 1488424
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaa-tatgcaagattcggggtttaaat 341  Q
    |||| ||| |||||||||||| |||||| ||||||| |||||||||||||||||| ||||    
T  1488365 tgagcttagctcagttggtatggacaatgcataaaaatatgcaagattcggggttcaaat 1488424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 10032335 - 10032280
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| |||||||||||||||| |||||| ||||| ||||||||| || |||||||    
T  10032335 gtgagcttaactcagttggtatggacaatgcataacatatgcaaggtttggggttt 10032280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 20927639 - 20927698
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    ||||| ||| |||||||||||| |||||||||||| ||||||||||| || |||| ||||    
T  20927639 gtgagcttagctcagttggtatggacaatacataatatatgcaagatccgaggttcaaat 20927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 32271436 - 32271479
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||| |||| |||||||||||||| |||||||||||||||||||    
T  32271436 tgagcttaattcagttggtatagaaaatacataaaatatgcaag 32271479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 6237780 - 6237726
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||| |||||| |  |||||| ||||| |||||||||||||||||||    
T  6237780 gtgagtttaactaagttggcagggacaatgcataatatatgcaagattcggggtt 6237726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10704392 - 10704338
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  10704392 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 10704338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 13864344 - 13864398
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||||| | |||||||    
T  13864344 gtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggtt 13864398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 17046334 - 17046380
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||||    
T  17046334 gtgagcttaactcagttggtatggacaatgcataatatatgcaagat 17046380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 18589928 - 18589870
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||| ||||||||||||||||  ||||| ||||| ||||||||| | |||||||||||    
T  18589928 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccggggtttaaa 18589870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 25385053 - 25385107
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||||||||||| |||||||  ||||| ||||||||||||||| ||| ||||||    
T  25385053 tgagtttaactcaattggtatgaacaatgcataaaatatgcaaggttcagggttt 25385107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 35610053 - 35610011
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgca 324  Q
    |||||||||||||| ||| |||||||||||||||| |||||||    
T  35610053 gtgagtttaactcaattgatatagacaatacataatatatgca 35610011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 5246211 - 5246163
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||| |||||||||||||| ||||| ||||||||| |||| ||||    
T  5246211 ttaactcaattggtatagacaatgcataatatatgcaaggttcgaggtt 5246163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 14140895 - 14140843
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    |||||| |||||||  | |||||| |||| |||||||||||||||||||||||    
T  14140895 ttaacttagttggtggaaacaataaataatatatgcaagattcggggtttaaa 14140843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 22555231 - 22555275
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| |||| ||||||||||    
T  22555231 gtgagcttaactcagttggtatggacaatgcatataatatgcaag 22555275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 28207132 - 28207176
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  28207132 gtgagcttagctcagttggtatggacaatgcataaaatatgcaag 28207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 29178447 - 29178491
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| |||||||||| ||||    
T  29178447 gtgagcttaactcagttggtatggacaatgcataaaatatacaag 29178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 35131121 - 35131165
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||||||| ||| || ||||||||||||||||||| |||||    
T  35131121 ttaactcagttgttatcgataatacataaaatatgcaaggttcgg 35131165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 41344579 - 41344619
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  41344579 agtttaactcagttggttgagacaatgcataaaatatgcaa 41344619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 41651000 - 41650956
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  41651000 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 41650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 43108563 - 43108623
Alignment:
Q  276 attttggtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||| |||| |||||||||||||||  |||||| ||||| ||||||||| ||| |||||    
T  43108563 attttgttgagcttaactcagttggtaaggacaatgcataatatatgcaaggttcagggtt 43108623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 14827525 - 14827583
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  14827525 gtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggtttaaa 14827583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 32484278 - 32484332
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||| |||||||    
T  32484278 gtgagtttaactcagttggtatggacaatgcttaaaatatgcaagatccggggtt 32484332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 7824807 - 7824851
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  7824807 gtgagtttaactcagttgatatagacaatacataatatatgcaag 7824851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 46051914 - 46051951
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  46051914 ttaactcagttggtatagacaatacataatatatgcaa 46051951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 1744045 - 1743997
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| ||||||||||| |||||||||||| ||||||||| |||||||||    
T  1744045 ttaattcagttggtatggacaatacataatatatgcaaggttcggggtt 1743997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 334909 - 334854
Alignment:
Q  282 gtgagtttaactcagttggtatagac-aatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||| | |||||||    
T  334909 gtgagtttaactcagttggtatggacaaatgcataaaatatgcaaggtccggggtt 334854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 52535926 - 52535883
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||    
T  52535926 gtgagcttaactcagttagtatagacaatacataatatatgcaa 52535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 7738669 - 7738723
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||| | |||||||    
T  7738669 gtgagcttaactcagttggtagggacaatgcataaaatatgcaaggtccggggtt 7738723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 8127463 - 8127517
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||| || ||||||    
T  8127463 gtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtttggggtt 8127517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10922369 - 10922315
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||  |||||| ||||| ||||||||||| |||||||    
T  10922369 gtgagcttaactcagttggtagggacaatgcataatatatgcaagatccggggtt 10922315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 17262178 - 17262231
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| ||||||||||||||||| | ||||||||||||||| |||||||||    
T  17262178 gtgagcttagctcagttggtatagaca-tgcataaaatatgcaaggttcggggtt 17262231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 19883087 - 19883133
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    |||||||||||| ||||||||| || ||| |||||||||||||||||    
T  19883087 gtgagtttaacttagttggtatggataatgcataaaatatgcaagat 19883133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 25340985 - 25340931
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  25340985 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 25340931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 28244165 - 28244111
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||||  ||||| ||||||||||||||| | |||||||    
T  28244165 gtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggtt 28244111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 32629080 - 32629134
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  32629080 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 32629134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 38131020 - 38130966
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| |||||||||||||||| |||||| ||||| ||||||||| | |||||||    
T  38131020 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggtt 38130966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 39481141 - 39481195
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| |||||| |||| |||||||||||||    
T  39481141 gtgagcttagctcagttggtatggacaatgcataaattatgtaagattcggggtt 39481195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 39552465 - 39552515
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    |||| |||||| |||||||||| ||||| ||||||||||||||| ||||||    
T  39552465 tgagcttaacttagttggtataaacaatgcataaaatatgcaaggttcggg 39552515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 44579636 - 44579690
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  44579636 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 44579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 51882261 - 51882215
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||||    
T  51882261 gtgagcttaactcagttggtatggacaatgcataatatatgcaagat 51882215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 55010155 - 55010113
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattc 330  Q
    ||||||||||||||||||||||||||||| ||||  |||||||    
T  55010155 ttaactcagttggtatagacaatacataatatatctaagattc 55010113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 665976 - 666009
Alignment:
Q  293 tcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||| ||||||||||||||||||||||    
T  665976 tcagttggtatggacaatacataaaatatgcaag 666009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 7300778 - 7300823
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    ||||||||||| |||||||||| |||||| ||||||||| ||||||    
T  7300778 ttaactcagttagtatagacaaaacataatatatgcaaggttcggg 7300823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 43815517 - 43815562
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||    
T  43815517 tgagtttaactcagttggtaatgacaatgcataacatatgcaagat 43815562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 54018461 - 54018408
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    |||||| ||||||||| |||||| ||||||||||||||| ||| ||||| ||||    
T  54018461 ttaacttagttggtatggacaatgcataaaatatgcaaggttcagggttcaaat 54018408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 2078246 - 2078294
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||||| ||||||| ||||| ||||||||| || ||||||    
T  2078246 ttaactcagttggtagagacaatgcataatatatgcaaggtttggggtt 2078294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 8831396 - 8831352
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||  ||||||||||| ||||||||||||| |||||    
T  8831396 ctcagttggtatgtacaatacataatatatgcaagattcagggtt 8831352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 19468451 - 19468495
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  19468451 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 19468495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 21506819 - 21506775
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  21506819 gtgagcttagctcagttggtatggacaatgcataaaatatgcaag 21506775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 26768401 - 26768445
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| ||||| ||||||||||||| |||||||||||||||    
T  26768401 gtgagcttatctcagctggtatagacaatgcataaaatatgcaag 26768445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 27397673 - 27397629
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||    
T  27397673 gtgagtttaactcagttggtatggacaatgtataatatatgcaag 27397629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 28093354 - 28093398
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||    
T  28093354 gtgagtttaattcagttggtatggacaatgcataatatatgcaag 28093398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 30912877 - 30912833
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||| ||||||||| |||||| |||||||||||||||    
T  30912877 gtgagcttaacttagttggtatggacaattcataaaatatgcaag 30912833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 32909362 - 32909318
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||| |||| |||||| |||||||||||||||    
T  32909362 gtgagcttaactcagttagtatggacaatgcataaaatatgcaag 32909318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 43345068 - 43345024
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  43345068 gtgagtttagctcagttggtatgaacaatacataatatatgcaag 43345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 44968183 - 44968223
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    |||||||||||||||| |||||| ||||||||||| |||||    
T  44968183 ttaactcagttggtatggacaatgcataaaatatgtaagat 44968223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 47185862 - 47185822
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    |||||| ||||||||||| ||||||| ||||||||||||||    
T  47185862 agtttagctcagttggtaaagacaatgcataaaatatgcaa 47185822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 28016250 - 28016197
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| |||||||    
T  28016250 tgagtttagctcagttgggatggacaatacataaaatatgcaagatccggggtt 28016197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 29234035 - 29233991
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||    
T  29234035 gtgagtttagctcagttggtatagacaatgcataaaatatgcaag 29233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 8153135 - 8153182
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagatt 329  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  8153135 gtgagtttaactcagttggtatagacaatgcataatatatgtaagatt 8153182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 1091179 - 1091233
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  1091179 gtgagcttaactcagttggtatagacaatgcataatgtatgcaaggttcggggtt 1091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 51046142 - 51046192
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||| |||||    
T  51046142 gtgagtttaactcagttggtatgaacaatacataaaatatgtaaggttcgg 51046192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 7616877 - 7616833
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||    
T  7616877 ctcagttggtagagacaatacataaaatatacaagatccggggtt 7616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 24978244 - 24978288
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||    
T  24978244 gtgagcttaactcagttggtatagataatacataatatatgcaag 24978288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 29506827 - 29506871
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||| |||||||||||||||||||||| |||||||||    
T  29506827 gtgagcttaacttagttggtatagacaatacataatatatgcaag 29506871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 30895334 - 30895374
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  30895334 gtgagcttaactcagttggtatggacaatacataaaatatg 30895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 43545911 - 43545867
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||    
T  43545911 gtgagtttaacttagttggtattgacaatgcataaaatatgcaag 43545867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 11014232 - 11014283
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||    
T  11014232 gtgagtttagctcagttggtagagacagtgcataatatatgcaagattcggg 11014283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 29935983 - 29936026
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||    
T  29935983 gtgagtttaactcagttggtatggacaatgcataatatatgcaa 29936026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 40675701 - 40675658
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcg 331  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||    
T  40675701 ttaactcagttagtatagacaatacataatatatacaagattcg 40675658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 52043273 - 52043332
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    ||||||||| |||||||||||| || ||| ||||||||||||||  ||||||||| ||||    
T  52043273 gtgagtttagctcagttggtatggataatgcataaaatatgcaatgttcggggttcaaat 52043332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 2613722 - 2613776
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||| ||| |||||||||    
T  2613722 gtgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggggtt 2613776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 24695559 - 24695613
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  24695559 gtgagtttagctcagttggtatgaacaatacataatatatgcaaaattcgaggtt 24695613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 34521251 - 34521197
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||| | |||||||    
T  34521251 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggtccggggtt 34521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 42888575 - 42888629
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  42888575 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 42888629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 43840386 - 43840340
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    |||||||||||||||||| ||| |||||| ||||||||||| |||||    
T  43840386 gtgagtttaactcagttgatatggacaatgcataaaatatgtaagat 43840340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 48100722 - 48100776
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| || ||||||    
T  48100722 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtttggggtt 48100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 40618910 - 40618955
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaaga 327  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  40618910 gtgagtttaactcagttggtaaagataatgcataatatatgcaaga 40618955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 44678068 - 44678019
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    ||||||| ||||||||||| ||||| ||||||||| ||||||||| ||||    
T  44678068 ctcagtttgtatagacaatgcataatatatgcaaggttcggggttcaaat 44678019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 584134 - 584090
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||| ||| |||||||||||| |||| ||||    
T  584134 gtgagtttaactcagttgatatcgacaatacataatatatacaag 584090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 11410627 - 11410667
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  11410627 gtgagcttaactcagttggtatgaacaatacataaaatatg 11410667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 17651441 - 17651397
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  17651441 gtgagcttaactaagttgatatggacaatacataaaatatgcaag 17651397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 21041344 - 21041384
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  21041344 gtgagtttacctcagttggtatggacaatgcataaaatatg 21041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 25086483 - 25086527
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  25086483 gtgagcttagctcagttggtatggacaatgcataaaatatgcaag 25086527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 27172783 - 27172739
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| ||||| |||||| |||||||||    
T  27172783 gtgagcttaactcagttggtatggacaaaacataatatatgcaag 27172739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 29451043 - 29450991
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataa-aatatgcaagattcggg 333  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||| ||||||    
T  29451043 gtgagcttaactcagttggtatggacaatgcataataatatgcaaggttcggg 29450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 30433566 - 30433510
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaat 341  Q
    ||||||||||||||| || ||| ||||||||| |||| ||||||| | |||||||||    
T  30433566 agtttaactcagttgatagagataatacataatatatacaagatttgaggtttaaat 30433510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 32950822 - 32950778
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  32950822 gtgagcttaactcagttggtataaacaatgcataatatatgcaag 32950778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 34877671 - 34877715
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||| ||| || ||||||| |||||||||||||||    
T  34877671 gtgagtttaactcaattgatagagacaatgcataaaatatgcaag 34877715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 43611424 - 43611464
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||||||| |||||||||||| |||||||||||| |||||    
T  43611424 gtgagtttagctcagttggtatggacaatacataatatatg 43611464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 44718109 - 44718069
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||||||| ||||||| |||||||||||||| |||||    
T  44718109 ctcagttggtatggacaatagataaaatatgcaaggttcgg 44718069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 49183173 - 49183217
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||  |||||||||||| |||||||||    
T  49183173 gtgagtttagctcagttggtaaggacaatacataatatatgcaag 49183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 52267764 - 52267808
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||  |||||| |||||||||||||||    
T  52267764 gtgagcttaactcagttggtaaggacaatgcataaaatatgcaag 52267808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 52441572 - 52441528
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| ||||||||||||||||||| ||||| |||||||||    
T  52441572 gtgagcttagctcagttggtatagacaatgcataatatatgcaag 52441528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 19599143 - 19599199
Alignment:
Q  280 tggtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||| | |||||||    
T  19599143 tggtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggtt 19599199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 32862141 - 32862097
Alignment:
Q  284 gagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  32862141 gagtttaacttagttggtatagacaatacataatatatgcaagat 32862097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 8879808 - 8879757
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggg 333  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  8879808 gtgagcttaactcagttggtatagacaatgcataatatatgcaaggttcggg 8879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 30463432 - 30463377
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| ||||||||||| ||||||||||| ||||| ||||||||| ||||||||||    
T  30463432 gtgaggttaactcagttagtatagacaatgcataatatatgcaaggttcggggttt 30463377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 44718879 - 44718820
Alignment:
Q  277 ttttggtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| |||||||||||||| ||| |||| |||||| |||| |||||||||||||||||||    
T  44718879 ttttcgtgagtttaactcaattgatataaacaatatataatatatgcaagattcggggtt 44718820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 21993182 - 21993226
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||    
T  21993182 gtgagcttaactcagttggtatggacaatgcataaaatatgcaag 21993226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 22267581 - 22267629
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattc 330  Q
    ||||||||||||||||||||| ||||||| ||||| ||||| |||||||    
T  22267581 gtgagtttaactcagttggtagagacaatgcataatatatgtaagattc 22267629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 24839488 - 24839528
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  24839488 gtgagcttaactcagttggtatagacaatgcataaaatatg 24839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 10029886 - 10029839
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagatt 329  Q
    |||||||||||| | |||||| ||||||||||||| ||||||||||||    
T  10029886 gtgagtttaacttaattggtaaagacaatacataatatatgcaagatt 10029839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 19793804 - 19793859
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacat-aaaatatgcaagattcggggtt 336  Q
    |||||||||||||||||| ||| |||||| ||| | ||||||||||||||||||||    
T  19793804 gtgagtttaactcagttgatatggacaatgcatgataatatgcaagattcggggtt 19793859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 23198810 - 23198767
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  23198810 gtgagtttaactcagttggtatgaacaatgcataaaatatgcaa 23198767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 33898009 - 33897966
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    |||| ||||||||||||||||  |||||||||||||||||||||    
T  33898009 gtgaatttaactcagttggtaaggacaatacataaaatatgcaa 33897966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 39706620 - 39706675
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| |||||||| |||||||| ||||||||||| ||||||||| || |||||||    
T  39706620 gtgagattaactcaattggtataaacaatacataatatatgcaaggtttggggttt 39706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 45425456 - 45425507
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||    
T  45425456 agtttaactcagttgataaagacaatgcataatatatgcaaggttcggggtt 45425507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 3672613 - 3672567
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||||||| |||||||| ||| |||||||||||| |||||||||||    
T  3672613 gtgagtttagctcagttgatatggacaatacataatatatgcaagat 3672567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 8683070 - 8683116
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||| ||| ||||||||||||||||||| ||||| |||||||||||    
T  8683070 gtgagcttagctcagttggtatagacaatgcataatatatgcaagat 8683116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 19416514 - 19416568
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  19416514 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 19416568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 25246771 - 25246825
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||||||| |||||||| || ||||||| ||||| ||||||||||||| |||||    
T  25246771 gtgagtttagctcagttgataaagacaatgcataatatatgcaagattctgggtt 25246825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 44106629 - 44106671
Alignment:
Q  283 tgagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||||||||||||||| || ||||||||||||| ||||||||    
T  44106629 tgagtttaactcagttgatagagacaatacataatatatgcaa 44106671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 48103735 - 48103681
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||||||||||||||   |||||| ||||||||||||||| |||||||||    
T  48103735 gtgagcttaactcagttggttgggacaatgcataaaatatgcaaggttcggggtt 48103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 3948054 - 3948099
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaaga 327  Q
    |||||||||||||||||| || ||||||| ||||| ||||||||||    
T  3948054 gtgagtttaactcagttgatagagacaatgcataatatatgcaaga 3948099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 39801706 - 39801759
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggt 335  Q
    ||||| ||| |||||||||||| |||||| ||||| ||||||||||| ||||||    
T  39801706 gtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggt 39801759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 1399162 - 1399206
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||    
T  1399162 gtgagtttaactcagttggtatggacaatgcatgatatatgcaag 1399206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 2450580 - 2450620
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatg 322  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  2450580 gtgagcttaactcagttggtatgaacaatacataaaatatg 2450620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 8261498 - 8261450
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||| |||||||||||||||||| ||||||||||| ||| || ||||||    
T  8261498 ttaagtcagttggtatagacaatgcataaaatatgtaaggtttggggtt 8261450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 10025994 - 10026038
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||| | |||||| |||||||||||||||    
T  10025994 gtgagcttaactcagttggtttggacaatgcataaaatatgcaag 10026038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 19578198 - 19578154
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||||||| | | |||||| |||||||||||||||    
T  19578198 gtgagtttaactcagttgattttgacaatgcataaaatatgcaag 19578154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 22991452 - 22991408
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||    
T  22991452 gtgagcttaactcagttggtatggacaatgcataatatatgcaag 22991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 27263347 - 27263391
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||||||||||| |||||| ||||| ||||||||| |||||    
T  27263347 ttaactcagttggtatggacaatgcataatatatgcaaggttcgg 27263391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 27270241 - 27270285
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcgg 332  Q
    |||||||||||||||| |||||| ||||| ||||||||| |||||    
T  27270241 ttaactcagttggtatggacaatgcataatatatgcaaggttcgg 27270285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 27993090 - 27993046
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||||  ||||| |||||||||||||||    
T  27993090 gtgagcttaactcagttggtatgaacaatgcataaaatatgcaag 27993046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 36428148 - 36428192
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| ||||||  ||||||||||||||    
T  36428148 gtgagcttaactcagttggtatggacaatgtataaaatatgcaag 36428192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 44454512 - 44454556
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||  |||||| |||||||||||||||    
T  44454512 gtgagcttaactcagttggtagggacaatgcataaaatatgcaag 44454556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 44558835 - 44558791
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||| |||||| ||||| |||||||||    
T  44558835 gtgagtttagctcagttggtatggacaatgcataatatatgcaag 44558791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 47342687 - 47342731
Alignment:
Q  292 ctcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||| |||||| ||||||||||||||| || ||||||    
T  47342687 ctcagttggtatggacaatgcataaaatatgcaaggtttggggtt 47342731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 1918519 - 1918475
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  1918519 gtgagtttaactcagttggtatagacaatgcataatatatgcaag 1918475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 2108725 - 2108769
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||    
T  2108725 gtgagcttaactcagttggtatggacaatgcataaaatatgcaag 2108769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 24269883 - 24269938
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| ||| ||||||| |||| |||||| ||||||||||||||| ||||||||||    
T  24269883 gtgagcttagctcagttagtatggacaatgcataaaatatgcaaggttcggggttt 24269938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 8569709 - 8569763
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||| ||||||| |||||| ||||| ||||||||| | |||||||    
T  8569709 gtgagtttaactcaattggtatggacaatgcataatatatgcaaggtccggggtt 8569763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 27928170 - 27928136
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataa 316  Q
    ||||||||||||||||||||| |||||||||||||    
T  27928170 gtgagtttaactcagttggtagagacaatacataa 27928136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 5271399 - 5271432
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatat 321  Q
    |||||||||||||||| |||||||||||||||||    
T  5271399 ttaactcagttggtatggacaatacataaaatat 5271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 331947 - 331903
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||    
T  331947 gtgagcttaactcagttggtagagacaatgcataatatatgcaag 331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 2726472 - 2726424
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    |||||||||||||||| |||||| ||||| ||||||||| | |||||||    
T  2726472 ttaactcagttggtatggacaatgcataatatatgcaaggtccggggtt 2726424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Original strand, 7342166 - 7342202
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaa 318  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  7342166 gtgagtttaactcagttggtatatacaatgcataaaa 7342202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 7885541 - 7885585
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| |||||||||||||||| | |||| |||||||||||||||    
T  7885541 gtgagcttaactcagttggtatggtcaatgcataaaatatgcaag 7885585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 8381255 - 8381211
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||    
T  8381255 gtgagcttaactcagttggtaaagacaatgcataacatatgcaag 8381211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 8810640 - 8810684
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| ||||||||||| ||||||||||||| |||||||||    
T  8810640 gtgagcttagctcagttggtaaagacaatacataatatatgcaag 8810684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 21373467 - 21373423
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||| ||||||| |||||| |||||||||||||||    
T  21373467 gtgagtttagctcaattggtatggacaatgcataaaatatgcaag 21373423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 21598963 - 21599015
Alignment:
Q  288 ttaactcagttggtatagacaatacataaaatatgcaagattcggggtttaaa 340  Q
    |||||| |||||||||  ||||||||||| ||||||||| | |||||||||||    
T  21598963 ttaacttagttggtatgaacaatacataatatatgcaaggtacggggtttaaa 21599015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 24373771 - 24373727
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||||    
T  24373771 gtgagtttaactcaattggtagagacaatgcataatatatgcaag 24373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 26320624 - 26320580
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  26320624 gtgagcttagctcagttggtatggacaatgcataaaatatgcaag 26320580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 19116 - 19070
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  19116 gtgagcttaactcagttggtataaacaatatataaaatatgcaagat 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 185263 - 185317
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||| |||||||    
T  185263 gtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggtt 185317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 223158 - 223204
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  223158 gtgagcttagctcagttggtatggacaatacataaaatatgcaagat 223204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 104599 - 104558
Alignment:
Q  284 gagtttaactcagttggtatagacaatacataaaatatgcaa 325  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  104599 gagtttaactcagttggtatagagaatacataatatatgcaa 104558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 1770 - 1718
Alignment:
Q  285 agtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||||||||||||||||  |||||| ||||||||||||||| |||| |||||    
T  1770 agtttaactcagttggtagggacaatgcataaaatatgcaaggttcgaggttt 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 45412 - 45467
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggttt 337  Q
    ||||| |||||||||||||| | |||||||||||| ||||||||| | ||||||||    
T  45412 gtgagcttaactcagttggtttggacaatacataatatatgcaaggtccggggttt 45467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 1528 - 1582
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaagattcggggtt 336  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||| | |||||||    
T  1528 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 47307 - 47258
Alignment:
Q  277 ttttggtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    |||| ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  47307 ttttcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 47258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 3141 - 3185
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| ||||||||||| ||||||||||||| |||||||||    
T  3141 gtgagcttagctcagttggtaaagacaatacataatatatgcaag 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 21816 - 21772
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  21816 gtgagcttagctcagttggtatagacaatgcataaaatatacaag 21772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 10818 - 10774
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||| |||||||||||  |||||| |||||||||||||||    
T  10818 gtgagtttagctcagttggtaaggacaatgcataaaatatgcaag 10774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 14247 - 14203
Alignment:
Q  282 gtgagtttaactcagttggtatagacaatacataaaatatgcaag 326  Q
    ||||||||||||||||||||||  ||||| ||||| |||||||||    
T  14247 gtgagtttaactcagttggtatgaacaatgcataatatatgcaag 14203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 31214 - 31170
Alignment:
Q  284 gagtttaactcagttggtatagacaatacataaaatatgcaagat 328  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||||    
T  31214 gagtttagctcagttggtatggacaatgcataatatatgcaagat 31170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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