View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21319_high_36 (Length: 245)
Name: NF21319_high_36
Description: NF21319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21319_high_36 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 14173166 - 14173384
Alignment:
| Q |
24 |
gtttcaatgtaaatataaaacgtaatcgaccattgacaactgaatctgctagttaaaaagggttcccaattcttgtaatattctaatcaagtttttaatt |
123 |
Q |
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| T |
14173166 |
gtttcaatgtaaatataaaacgcaatcgaccattaacaactgaatctgctagttaaaaagggttcccaattcttgtaatattctaatcaagttttcaatt |
14173265 |
T |
|
| Q |
124 |
caacagttatgcaaagagctgctactcaagcatcctaattatgtttgaggttgataacccctatca-tttgaaaaagattataagcacaaaccattcctt |
222 |
Q |
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||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||||||||||| ||| |
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| T |
14173266 |
caacagttatgcaaatagctgctactcaagcatcctaatcatgtttgaggttgataacccctattattttgaaaaggattataagcacaaaccattactt |
14173365 |
T |
|
| Q |
223 |
ttatctattaattcatctc |
241 |
Q |
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||||||||||||||||||| |
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| T |
14173366 |
ttatctattaattcatctc |
14173384 |
T |
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