View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21319_high_40 (Length: 237)
Name: NF21319_high_40
Description: NF21319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21319_high_40 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 16186640 - 16186420
Alignment:
| Q |
17 |
atatcgtccttctttatttgatcactttatctttgttgcttggttgttcaccgataattccaggtatcagtgcgatgaaccttttattataattgctttt |
116 |
Q |
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| T |
16186640 |
atatcgtccttctttatttgatcactttacctttgttgcttggttgttcaccgataattccaggtatcagtgcgatgaaccttttattataattgctttt |
16186541 |
T |
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| Q |
117 |
aaaatcttttatgatttagtcttggtacatatttgatgatttcttaaccgttcatgaaactgatgatgtatatgtactttcttctaatttttgacattaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16186540 |
aaaatcttttatgatttagtcttggtacatatttgatgatttcttaaccgttcatgaaactgatgatgtatatgtactttcttctaatttttgacattaa |
16186441 |
T |
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| Q |
217 |
aaactatcaattttctatgtt |
237 |
Q |
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| T |
16186440 |
aaactatcaattttctatgtt |
16186420 |
T |
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