View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21319_low_32 (Length: 294)
Name: NF21319_low_32
Description: NF21319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21319_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 980761 - 981046
Alignment:
| Q |
1 |
gtaatatcaaacttcagaggtacctacaattgggtaaaaaag--ctatacaaacttacaaccatgttttctgcatatttagttgaataggttctgtcttt |
98 |
Q |
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||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
980761 |
gtaatatcaaacttcagaggtacctacaactgggtaaaaaaaatctatacaaacttacaaccatgttttctgcatatttagttgaataggttccgtcttt |
980860 |
T |
|
| Q |
99 |
ccttaaccaagttgtcactataacctcagctcgacaaatgggtcttctcaaatctgtctcctatcacattatgttaaagcaaagaaaaagttatagtatg |
198 |
Q |
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| T |
980861 |
cttcaaccaagttgtcactataacctcagctcgacaaatgggtcttctcaattctgtctcctatcatattatgttaaagcaaagaaaaagttagagtatg |
980960 |
T |
|
| Q |
199 |
gtaggtaacctgaaactaaatttgcaaaaatacaaccaaaatatgattct-cacattagaacaaaccatttcgtacgccctcctttg |
284 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||| |||||||||||| ||||||||||| |
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| T |
980961 |
ataggtaacctgaaactaaatttgcaaaaatactaccaaaatatgattttacacattggaac-aaccatttcgtatgccctcctttg |
981046 |
T |
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