View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21319_low_50 (Length: 201)
Name: NF21319_low_50
Description: NF21319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21319_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 32536448 - 32536553
Alignment:
| Q |
79 |
taacgaccagaataagaacaacaaccatgttctccgatctcgttttatttggtttgaaagtgcgacggccagaacaaaggaggtgaggtggtcggcgatg |
178 |
Q |
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| T |
32536448 |
taacgaccagaataagaacaacgac-atgttcttcgatctcgttttatttggtttgaaagtgcgacggccagaacaaaggaggtgaggtggtcagcgatg |
32536546 |
T |
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| Q |
179 |
ttctctg |
185 |
Q |
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||||||| |
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| T |
32536547 |
ttctctg |
32536553 |
T |
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