View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2131_low_8 (Length: 339)
Name: NF2131_low_8
Description: NF2131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2131_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 19 - 326
Target Start/End: Complemental strand, 36207752 - 36207444
Alignment:
| Q |
19 |
tttccattcaaagaaaatgtatatatggtaaaactaaacactagtaacaaactcaaactcacatatgcatggttttat---tccataaccacaaaatctt |
115 |
Q |
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| T |
36207752 |
tttccattcaaagaaaatgtatatacagtaaaactaaacactagtaacaaactcaaactcacatatgcatggttttatacttccataaccacaaaatctt |
36207653 |
T |
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| Q |
116 |
tttatctctatacaacaagagcaaatctagctaacaaaacaaattaaccactctttctaatattataataatatcatatacaaatgcaacttcaattatg |
215 |
Q |
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| T |
36207652 |
tttatctctatacaacaagagcaaatctagctaacgaaacaaattaaccactctttctaatattataataatatcatatacaaatgcaacttcaattatg |
36207553 |
T |
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| Q |
216 |
ctagcatataaactatgtatatatacttccctgtacatggaaaatataaatagctgctactatactactatttcttattgtgtaaagggttggctcctgt |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36207552 |
ctagcatataaactatgtatatatacttccctgtacatg--aaaaataaatagctgctactatactactatttcttattgtgtaaagggttggctcctgt |
36207455 |
T |
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| Q |
316 |
aggtactcttc |
326 |
Q |
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||||||||||| |
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| T |
36207454 |
aggtactcttc |
36207444 |
T |
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