View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21321_low_24 (Length: 257)
Name: NF21321_low_24
Description: NF21321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21321_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14201137 - 14200896
Alignment:
| Q |
1 |
aatatgatcgtactgcatcaccacaatcacagttaaagatcaaagccttcatttcaccaccaagatcttcaaacaaggcttctaaacctccgttaccgtc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
14201137 |
aatatgatcgtactgcatcaccacaatcacagttaaagatcaaagccttcatttctccaccaagatcttcaaacaaggcttctaaacctccattaccgtc |
14201038 |
T |
|
| Q |
101 |
tctgtcaaaatcagcatctgtctcttcctcatcctctgcatcatcgacgtcatcttcatcatcttattgcagcgttaatggtggaggttccagccagaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14201037 |
tctgtcaaaatcagcatctgtctcttcctcatcctctgcatcatcgacgtcatcttcatcatcttattgcagcgttaatggtggaggttccagccagaag |
14200938 |
T |
|
| Q |
201 |
cacacgacagagcagcctgtagtttaccgatgcgttcatcat |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
14200937 |
tacacgacagagcagcctgtagtttaccgatgcgttcatcat |
14200896 |
T |
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