View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21321_low_33 (Length: 238)
Name: NF21321_low_33
Description: NF21321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21321_low_33 |
 | |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0094 (1 HSPs) |
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| [»] scaffold0028 (2 HSPs) |
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| [»] scaffold0169 (1 HSPs) |
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| [»] chr6 (6 HSPs) |
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| [»] scaffold0139 (1 HSPs) |
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| [»] chr3 (4 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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| [»] chr8 (2 HSPs) |
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| [»] chr4 (7 HSPs) |
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| [»] scaffold0031 (2 HSPs) |
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| [»] scaffold0004 (2 HSPs) |
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| [»] scaffold0096 (1 HSPs) |
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| [»] scaffold0600 (1 HSPs) |
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| [»] scaffold0335 (1 HSPs) |
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| [»] scaffold0317 (1 HSPs) |
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| [»] scaffold0222 (1 HSPs) |
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| [»] scaffold0138 (1 HSPs) |
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| [»] scaffold0012 (1 HSPs) |
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| [»] scaffold0037 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0127 (1 HSPs) |
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| [»] scaffold0232 (1 HSPs) |
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| [»] scaffold0461 (1 HSPs) |
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| [»] scaffold0483 (1 HSPs) |
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Alignment Details
Target: scaffold0053 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 81482 - 81261
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
81482 |
attcagctcatactaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacagcaatattctaaattttgaa |
81383 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaaga |
216 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
81382 |
atcaatctgaacacgaattctaagcacattaaacatgattcctacacttttcccttcaaaatcagtaatagaaccctaattcacatttcctatctcaaga |
81283 |
T |
|
| Q |
217 |
acaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
81282 |
acaatttatgttaaatcaattt |
81261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 52033 - 52213
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
52033 |
attcagctcattctaacaatcttgcaaaatctctcaaactttctccaacaaatcctaatctccctcaaattctgattacagcaatattctagattctgaa |
52132 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattc |
198 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |||||||| |
|
|
| T |
52133 |
atcaatctgaacatgaattctaagcacattaaacatgattcctacacttttcctttcaaaatcggt-atagaaccctaattc |
52213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 69540 - 69745
Alignment:
| Q |
26 |
attctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatcta |
125 |
Q |
| |
|
||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| || ||||||||| |
|
|
| T |
69540 |
attctaacaatcttgcaaaatctttcaaattttctccaacaaatcctaatctccctcaaattctgattccagcaacattctaaatattgtaatcaatctg |
69639 |
T |
|
| Q |
126 |
aacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttat |
225 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| |||| |||||||||||||||| || |
|
|
| T |
69640 |
aatatgaattctaagcacattaaacatgattcctacacttttcctttcaaaatc-ggcctagaaccctaattcccaatctttatctcaagaacaattcat |
69738 |
T |
|
| Q |
226 |
gttaaat |
232 |
Q |
| |
|
||||||| |
|
|
| T |
69739 |
gttaaat |
69745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 1855 - 2065
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| | ||||||||||| |||| ||||| |||||||| |||||||| ||| | ||||||||||||||| ||||||| |||||| |
|
|
| T |
1855 |
attcaactcattcttaaaatcttgcaaaatctctgaaattttctccaac-aatcctaacctctc-caaattctgattacagcaacattataaatt----- |
1947 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattccta-tctcaag |
215 |
Q |
| |
|
||||| || ||||||||| |||||| | |||||||| | ||| | ||| ||||| |||||||| |||||| |||||||| ||||| || | ||||| |
|
|
| T |
1948 |
---aatctgaatacgaattctcagcacaattaacatgatccttactcattt-ctttcgaaatcagt-atagaaccctaattcccaatttttattttcaag |
2042 |
T |
|
| Q |
216 |
aacaatttatgttaaatcaattt |
238 |
Q |
| |
|
||||||| || |||| ||||||| |
|
|
| T |
2043 |
aacaattcatattaagtcaattt |
2065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 6762 - 6981
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattc-tga |
115 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||| |||||| |||||||||| ||| || || || ||||||||||||||| |||| || |||| || | | |
|
|
| T |
6762 |
attcagctcattccaacgatcttgcaaaatctctcaaatt-tctccaacaa-tcccaaccttccccaaattctgattacagcaacgttataaaatcctaa |
6859 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaag |
215 |
Q |
| |
|
|||| || | ||||||| ||||||||| | | ||||||||||||||||| |||||||| ||||| ||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
6860 |
aatcgatttgaacacga-ttctaagcataattaacatgattcctacactcttcctttcaaaatcggtaatagaaccctaattctcaattcctatttcaag |
6958 |
T |
|
| Q |
216 |
aacaatttatgttaaatcaattt |
238 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
6959 |
aacaattcatgttaaatcaattt |
6981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 11157879 - 11158039
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| |||||||||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||| || |||||||||||| || | |
|
|
| T |
11157879 |
attcagatcattctagcaatcttgcaaaacctctcaa-ttctctccaacaattcctaatctctctcaa-ttctgattccagcaacattctaaacattgta |
11157976 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatc |
179 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11157977 |
atcaatctgaatatgaattctaagcacattaaacatgattcctacacttttcctttcaaaatc |
11158039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 18712629 - 18712749
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattccta |
160 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| ||| ||||||| || ||| ||||||| ||| |||||||| |||| ||||||||||||||||| || |
|
|
| T |
18712629 |
ccaaccaattctaatctccctcaaattctgatcacagcaacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattctta |
18712728 |
T |
|
| Q |
161 |
cacttttcctttctaaatcag |
181 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
18712729 |
caccattcctttcaaaatcag |
18712749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 32651401 - 32651505
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctcaaa-ttctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcc |
158 |
Q |
| |
|
|||||||||| |||||||| ||||| ||||||| ||| ||||||| || ||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
32651401 |
tccaacaaattctaatctcattcaaaattctgatcacagcaacattatagattaagaaatcattctaaacactaaaactaaacacattaaacatgattct |
32651500 |
T |
|
| Q |
159 |
tacac |
163 |
Q |
| |
|
||||| |
|
|
| T |
32651501 |
tacac |
32651505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 16372738 - 16372878
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || ||||||||| |||||| ||| | ||||||| ||||||| ||||||| ||| | || || |
|
|
| T |
16372738 |
attcatctcattctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctc-caaattcggattacagcaacattataattcctaaa |
16372835 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
|||||||| || | |||||||||||| | | ||||||| |||| |
|
|
| T |
16372836 |
atcaatctgaatatgaattctaagcataattaacatgaatcct |
16372878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 20805294 - 20805326
Alignment:
| Q |
206 |
ctatctcaagaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
20805294 |
ctatctcaagaacaatttatgttaaatcaattt |
20805326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 25396960 - 25397178
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattcta-aattctga |
115 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||| | ||| || |||||||||||| || | ||| || | |
|
|
| T |
25396960 |
attcagctcattctaacaatgttgcaaattctctcaaattctctccaacaa-tcccaatctttcccaa-ttatgattacaacaatgttacagaatcctaa |
25397057 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaag |
215 |
Q |
| |
|
|| | | || |||| | ||||||||| | | ||| || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25397058 |
aaacgacctgaacatta-ttctaagcataattaacttgtctcctacacttttcctttcaaaatcagtaatagaaccctaattcacaattcctatctcaag |
25397156 |
T |
|
| Q |
216 |
aacaatttatgttaaatcaattt |
238 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
25397157 |
aacaa-ttatgttaaatcaattt |
25397178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 238
Target Start/End: Original strand, 25598475 - 25598649
Alignment:
| Q |
64 |
acaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcctacac |
163 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||||||||||| | ||||||||| | | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
25598475 |
acaaattctaatctccctcaaattctgattccagcaacattctaaatattataatcaatctgcatatgaattctaagcacattaaacatgtttcctacac |
25598574 |
T |
|
| Q |
164 |
ttttcctttctaaatcagtaatagaatcctaattcacaattccta-tctcaagaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||||| ||||| | | |||| |||||||| |||| ||| | |||||||||| | ||||||||||||||| |
|
|
| T |
25598575 |
ttttcctttcaaaatcggcca-agaaccctaattcccaatctctattttcaagaacaactcatgttaaatcaattt |
25598649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 2287038 - 2286817
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
||||||||||||| |||||||||||| | |||| ||||||||||| ||||| ||| || || | | ||||||||||||||||| || |||||| |||| |
|
|
| T |
2287038 |
attcagctcattccaacaatcttgcataatctctcaaattctctctaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctga |
2286940 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctcaa |
214 |
Q |
| |
|
|| ||||||||| | |||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| ||||||| | |||||||||| |||| |
|
|
| T |
2286939 |
aaatgatctaaacatg-attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaa |
2286841 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
2286840 |
gaacaattcatgttaaatcaattt |
2286817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 24513046 - 24512894
Alignment:
| Q |
83 |
aaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagt |
182 |
Q |
| |
|
|||||||||| ||||||||||| || || ||||||| ||| || ||||| |||| |||||||| ||||||||||||||||| |||| | |||||||| |
|
|
| T |
24513046 |
aaattctgatcacaacaacattatagatcaagaaatcattctgaatacgaaaactaaacacattaa-catgattcctacactttccctt-caaaatcagt |
24512949 |
T |
|
| Q |
183 |
aatagaatcctaattcacaattcctatctcaagaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
| ||||| |||||||| ||||| |||||||||||||||| |||||||| |||||| |
|
|
| T |
24512948 |
a-tagaaccctaattcccaatttttatctcaagaacaattcatgttaaaacaattt |
24512894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 19471604 - 19471385
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
||||||||||||| |||||||||||| | |||| ||||||||||||||| ||||| || || | | ||||||||||||| ||| || | ||| || | |
|
|
| T |
19471604 |
attcagctcattccaacaatcttgcataatctctcaaattctctccaac-aatcccaacctttc-ccaattctgattacagcaatgttacagaatcctaa |
19471507 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctcaa |
214 |
Q |
| |
|
|| | |||| |||| | |||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| ||||||| | |||||| ||| |||| |
|
|
| T |
19471506 |
aaacgatctgaacatg-attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcttatttcaa |
19471408 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||| ||| ||||||||||||||| |
|
|
| T |
19471407 |
gaac-attcatgttaaatcaattt |
19471385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 9187344 - 9187444
Alignment:
| Q |
81 |
tcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatca |
180 |
Q |
| |
|
|||||||||||| ||||||||||| || ||| ||||||| ||| ||||| || | | ||||||||||||||||| |||| |||||||| |||||| |
|
|
| T |
9187344 |
tcaaattctgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatca |
9187443 |
T |
|
| Q |
181 |
g |
181 |
Q |
| |
|
| |
|
|
| T |
9187444 |
g |
9187444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 15266 - 15047
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| ||||||| |||| |||| | |||| || ||| ||||| |||||||||||||||||||||| ||| ||||||| || ||| ||| |
|
|
| T |
15266 |
attcagatcattctagcaatcttacaaaatctctccaattttc-ccagcaaattctaatctccctcaaattctgatcacagcaacattatagattaagaa |
15168 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaaga |
216 |
Q |
| |
|
|||| ||| |||||||| |||||||||||||||||||||| ||||| |||||||| ||||| | |||| |||||||| |||| |||||||||| |
|
|
| T |
15167 |
atcattctgaacacgaaaactaagcacattaaacatgattcttacaccattcctttcaaaatc-gacccagaaccctaattcccaatctttatctcaaga |
15069 |
T |
|
| Q |
217 |
acaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||| |||||||| |||||| |
|
|
| T |
15068 |
acaattcatgttaaaacaattt |
15047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 16800812 - 16801033
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
||||||||||||| |||||||||||| | |||| ||||||||||||||||| ||| || || | | ||||||||||||||||| || |||||| |||| |
|
|
| T |
16800812 |
attcagctcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctga |
16800910 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctcaa |
214 |
Q |
| |
|
|| | |||| |||| | |||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| ||||||| | |||||||||| |||| |
|
|
| T |
16800911 |
aaacgatctgaacatg-attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaa |
16801009 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
16801010 |
gaacaattcatgttaaatcaattt |
16801033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 18929074 - 18929187
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaatt-ctaagcacattaaacatgattcct |
159 |
Q |
| |
|
||||| ||| ||||||| |||||| ||||||| ||| ||||||| || ||| ||||||| |||||||| ||| |||| ||||||||||||||||| | |
|
|
| T |
18929074 |
ccaaccaattctaatctacctcaatttctgatcacagcaacattatagattaagaaatcattctaaacatgaaaaactaaacacattaaacatgattctt |
18929173 |
T |
|
| Q |
160 |
acacttttcctttc |
173 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
18929174 |
acaccattcctttc |
18929187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 51301421 - 51301517
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctca-aattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattc |
157 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||| ||||||||||| || ||| ||||||| ||||||||| || |||| |||||||||| |||||| |
|
|
| T |
51301421 |
tccaacaaattctaatctcc-tcataattctgatcacaacaacattatagattaagaaatcattctaaacactaa-actaaacacattaaacctgattc |
51301517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 17240739 - 17240618
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||| ||| ||||||| || ||| |||||| | | ||||| || | || || ||||||||||||| | |
|
|
| T |
17240739 |
tccaacaaatcctaatttccttcaaattctgatcacagcaacattatagattaataaatcattttgaacactaaattaaaatacgttaaacatgattctt |
17240640 |
T |
|
| Q |
160 |
acacttttcctttctaaatcag |
181 |
Q |
| |
|
|||| |||||||| ||||||| |
|
|
| T |
17240639 |
acaccattcctttcaaaatcag |
17240618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 35710 - 35489
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
|||| |||||||| |||||||||||| | |||| ||||||||||||||||| ||| || || | | ||||||||||||||||| || |||||| |||| |
|
|
| T |
35710 |
attcggctcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctga |
35612 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctcaa |
214 |
Q |
| |
|
|| | |||| |||| | |||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| ||||||| | |||||||||| |||| |
|
|
| T |
35611 |
aaacgatctgaacatg-attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaa |
35513 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
35512 |
gaacaattcatgttaaatcaattt |
35489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 21931485 - 21931702
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattc-tga |
115 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||| |||||| |||||||||| ||| || || || ||| ||||||||||| |||| || |||| || | | |
|
|
| T |
21931485 |
attcagctcattccaacgatcttgcaaaatctctcaaatt-tctccaacaa-tcccaaccttccccaa-ttctgattacagcaacgttataaaatcctaa |
21931581 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaag |
215 |
Q |
| |
|
|||| |||| ||||||| |||||| | | | ||||||| |||||||||||||||||| ||||| |||||||| |||||||| ||||||||| ||||| |
|
|
| T |
21931582 |
aatcgatctgaacacga--tctaagtataattaacatgactcctacacttttcctttcaaaatcgataatagaaccctaattcttaattcctatttcaag |
21931679 |
T |
|
| Q |
216 |
aacaatttatgttaaatcaattt |
238 |
Q |
| |
|
| ||||| ||||||||||||||| |
|
|
| T |
21931680 |
atcaattcatgttaaatcaattt |
21931702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 18614060 - 18614222
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| ||||||| |||| |||| | |||| || |||||||| ||||||| |||||||||||||| ||| ||||||| | ||| ||| |
|
|
| T |
18614060 |
attcagatcattctagcaatcttacaaaatctctccaattttc--caacaaattctaatctacctcaaattctgatcacagcaacattatggattaagaa |
18614157 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcag |
181 |
Q |
| |
|
|||| ||| |||||||| ||||||||| ||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
18614158 |
atcattctgaacacgaaaactaagcacaataaacataattcttacaccattcctttctaaatcag |
18614222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 15245115 - 15245221
Alignment:
| Q |
134 |
ttctaagcacattaaacatgattcctacactttt--cctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttatgttaaa |
231 |
Q |
| |
|
||||||||| | | |||||||||||||||||||| |||| | ||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
15245115 |
ttctaagcataatcaacatgattcctacactttttcccttccaaaatcagtaatagaaccctaattcataattcctttctcaagaacaattcatgttaaa |
15245214 |
T |
|
| Q |
232 |
tcaattt |
238 |
Q |
| |
|
||||||| |
|
|
| T |
15245215 |
tcaattt |
15245221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 15308020 - 15308126
Alignment:
| Q |
134 |
ttctaagcacattaaacatgattcctacactttt--cctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttatgttaaa |
231 |
Q |
| |
|
||||||||| | | |||||||||||||||||||| |||| | ||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
15308020 |
ttctaagcataatcaacatgattcctacactttttcccttccaaaatcagtaatagaaccctaattcataattcctttctcaagaacaattcatgttaaa |
15308119 |
T |
|
| Q |
232 |
tcaattt |
238 |
Q |
| |
|
||||||| |
|
|
| T |
15308120 |
tcaattt |
15308126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 8834682 - 8834901
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaa-attctga |
115 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||| |||||| |||||| ||| ||||||||| | ||| ||| ||||||| ||| || || || || | |
|
|
| T |
8834682 |
attcagcttattccaacactcttgcaaattctctcaaatt-tctccagcaa-tcctaatctttcccaa-ttccgattacatcaatgttacaacatcctaa |
8834778 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacactttt-cctttctaaatcagtaatagaatcctaattcacaattcctatctcaa |
214 |
Q |
| |
|
|||| |||| |||| || ||||||||| | | |||||||||||||||||||| || ||| | | ||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
8834779 |
aatcgatctgaacatga-ttctaagcataattaacatgattcctacactttttcccttcaataacagtaatagaaccctaattctcaattcctatttcaa |
8834877 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
8834878 |
gaacaattcatgttaaatcaattt |
8834901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 14911866 - 14912087
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
||||| ||||||| |||||||||||| | |||| ||||||||||||||||| ||| || || | | ||||||||||||||||| || |||||| |||| |
|
|
| T |
14911866 |
attcatctcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctga |
14911964 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctcaa |
214 |
Q |
| |
|
|| | |||| |||| | |||||||||| | | |||||| |||||||||||| || ||||| ||| ||||| ||||||| | |||||||||| |||| |
|
|
| T |
14911965 |
aaacgatctgaacatg-attctaagcataattaacatgtcacctacacttttcaactcaaaatctgtattagaaccctaattccccaattcctatttcaa |
14912063 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
14912064 |
gaacaattcatgttaaatcaattt |
14912087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 13888557 - 13888647
Alignment:
| Q |
148 |
aacatgattcctacactttt-cctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||||||||||||||| || ||| |||||||||| |||| |||||||||||||||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
13888557 |
aacatgattcctacactttttcccttcaaaatcagtaacagaaccctaattcacaattcctatctcaa-agcaattcatgttaaatcaattt |
13888647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 14486447 - 14486532
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt |
104 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| | |||| |||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
14486447 |
attcagctcattctaacaatctagcaa-ttctctccaattttctccaacaattc-taatctccctcaaattctgattacaacaacatt |
14486532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 18213616 - 18213738
Alignment:
| Q |
82 |
caaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcc-tacacttttcctttctaaatca |
180 |
Q |
| |
|
||||||| ||||||||||||||| ||| | || ||||| |||| || | |||||||||||| | | ||||||| ||| ||| ||||| ||| | |||||| |
|
|
| T |
18213616 |
caaattcggattacaacaacattataattcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactctttt-cttccaaaatca |
18213714 |
T |
|
| Q |
181 |
gtaatagaatcctaattcacaattc |
205 |
Q |
| |
|
|| |||||| |||||||| |||||| |
|
|
| T |
18213715 |
gt-atagaaccctaattcccaattc |
18213738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 121689 - 121908
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaa-attctga |
115 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||| |||||| |||||||||| ||||||||| | ||| ||| ||||||| ||| || | || || | |
|
|
| T |
121689 |
attcagcttattccaacactcttgcaaattctctcaaatt-tctccaacaa-tcctaatctttcccaa-ttccgattacagcaatgttacagcatcctaa |
121785 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacactttt-cctttctaaatcagtaatagaatcctaattcacaattcctatctcaa |
214 |
Q |
| |
|
|||| |||| |||| || ||||||||| | | |||||||||||||||||||| || ||| ||| ||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
121786 |
aatcgatctgaacatga-ttctaagcataattaacatgattcctacactttttcccttcaaaaacagtaatagaaccctaattctcaattcctatttcaa |
121884 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||| ||||||| |
|
|
| T |
121885 |
gaacaattcatgttaactcaattt |
121908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 132566 - 132784
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaa-attctga |
115 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||| |||||| |||||||||| ||||||||| | ||| ||| ||||||| || || || || || | |
|
|
| T |
132566 |
attcagcttattccaacactcttgcaaattctctcaaatt-tctccaacaa-tcctaatctttcccaa-ttccgattacatcagtgttacaacatcctaa |
132662 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacactttt-cctttctaaatcagtaatagaatcctaattcacaattcctatctcaa |
214 |
Q |
| |
|
|||| |||| |||| || ||||||||| | | |||||||||||||||||||| || ||| ||| ||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
132663 |
aatcgatctgaacatga-ttctaagcataattaacatgattcctacactttttcccttcaaaa-cagtaatagaaccctaattctcaattcctatttcaa |
132760 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||| ||||||| |
|
|
| T |
132761 |
gaacaattcatgttaactcaattt |
132784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 116736 - 116846
Alignment:
| Q |
71 |
ctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcct |
170 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || ||| ||||||| ||| |||||||| |||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
116736 |
ctaatctccctcaaattctgatcacaacaacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttacaccattcct |
116835 |
T |
|
| Q |
171 |
ttctaaatcag |
181 |
Q |
| |
|
||| ||||||| |
|
|
| T |
116836 |
ttcaaaatcag |
116846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 128926 - 128876
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaa |
67 |
Q |
| |
|
||||||||||||| |||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
128926 |
attcagctcattccaacaatcttgcataatctctcaaattctctccaacaa |
128876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 39662 - 39557
Alignment:
| Q |
134 |
ttctaagcacattaaacatgattcctacactttt-cctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttatgttaaat |
232 |
Q |
| |
|
||||||||| | | |||||||||||||||||||| || ||| ||||||||| ||| | |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
39662 |
ttctaagcataatcaacatgattcctacactttttcccttcaaaatcagtagtagtaccctaattcacaattcctatctcaagaacaattcaatttaaat |
39563 |
T |
|
| Q |
233 |
caattt |
238 |
Q |
| |
|
|||||| |
|
|
| T |
39562 |
caattt |
39557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 23264972 - 23265092
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattccta |
160 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| ||||||||||| || ||| ||||||| ||| ||| |||| |||| ||||||||||||||||| || |
|
|
| T |
23264972 |
ccaaccaattctaatctccctcaaattctgatcacaacaacattatagattaagaaatcattctgaacgcgaaaactaaacacattaaacatgattctta |
23265071 |
T |
|
| Q |
161 |
cacttttcctttctaaatcag |
181 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
23265072 |
caccattcctttcaaaatcag |
23265092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 21908189 - 21908285
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattc |
157 |
Q |
| |
|
||||| ||| ||||||| |||||| ||||||| ||||||||||| || ||| ||||||| ||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
21908189 |
ccaaccaattctaatctacctcaatttctgatcacaacaacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattc |
21908285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 6260443 - 6260303
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || ||||||||| |||||| ||| || |||||| ||||||| ||||||| ||| | || || |
|
|
| T |
6260443 |
attcatctcattctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctct-aaattcggattacagcaacattataattcctaaa |
6260346 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
|||||||| || | |||||||||||| | | ||||||| |||| |
|
|
| T |
6260345 |
atcaatctgaatatgaattctaagcataattaacatgaatcct |
6260303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 9242746 - 9242886
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || |||||||| |||||||| ||| | |||||| ||||||| ||||||| ||| | || || |
|
|
| T |
9242746 |
attcatctcattctcacaatcttgcaatttcccccaatttttctccaac-aatcctaacctctc-caaatttggattacagcaacattataattcctaaa |
9242843 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
||| |||| || | |||||||||||| | | ||||||| |||| |
|
|
| T |
9242844 |
atcgatctgaatatgaattctaagcataattaacatgaatcct |
9242886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 24661363 - 24661412
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaaca |
66 |
Q |
| |
|
|||||| |||||| |||||||||||| | |||| |||||||||||||||| |
|
|
| T |
24661363 |
attcagttcattccaacaatcttgcataatctctcaaattctctccaaca |
24661412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 13664718 - 13664863
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| ||||||| |||| |||| | |||| || |||||||| |||||||||||||||||||||| ||| ||||||| || ||| ||| |
|
|
| T |
13664718 |
attcagatcattctagcaatcttacaaaatctctccaattttc-ccaacaaactctaatctccctcaaattctgatcacagcaacattatagattaagaa |
13664816 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacac |
163 |
Q |
| |
|
|||| ||| |||||||| ||||||||| ||||||| |||| ||||| |
|
|
| T |
13664817 |
atcattctgaacacgaacactaagcacaataaacataattcttacac |
13664863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 13679281 - 13679443
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| |||||| |||| |||| | |||| || ||||||||| |||||||||||| ||||||||| ||| |||||| || ||| ||| |
|
|
| T |
13679281 |
attcagatcattctataaatcttacaaaatctctccaattttc-ccaacaaattctaatctccctc-aattctgatcacagtaacattatagattaagaa |
13679378 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcag |
181 |
Q |
| |
|
|||| ||| |||||||| ||||||||| ||||||| |||| ||||| |||||||| ||||||| |
|
|
| T |
13679379 |
atcattctgaacacgaacactaagcacaataaacataattcttacaccattcctttcaaaatcag |
13679443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 14566989 - 14567130
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || |||||||||| |||||| ||| | ||||||| ||||||||||||||| ||| | || || |
|
|
| T |
14566989 |
attcatctcattctcacaatcttgcaatttccctcaatttttctccaacaa-tcctaacctctcccaaattcggattacaacaacattataattcctaaa |
14567087 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
||| |||| || | |||||||||||| | | ||||||| |||| |
|
|
| T |
14567088 |
atcgatctgaatatgaattctaagcataattaacatgaatcct |
14567130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 238
Target Start/End: Complemental strand, 21231186 - 21231010
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
||||||| || ||||| || |||||||||||| ||||||||||| || ||| ||||||| ||| ||||| || | | ||||||||||||||||| | |
|
|
| T |
21231186 |
tccaacagattctaatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacaccaaattacaacacattaaacatgattctt |
21231087 |
T |
|
| Q |
160 |
acacttttcctttctaaatcagtaatagaatcctaattcacaattcctatctcaagaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||| |||||||| |||||| | || |||||||| ||||| |||||||||||||||| |||||||| |||||| |
|
|
| T |
21231086 |
acaccattcctttcagaatcagca--tcaaccctaattcccaatttttatctcaagaacaattcatgttaaaacaattt |
21231010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 46625861 - 46625967
Alignment:
| Q |
133 |
attctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcac-aattcctatctcaagaacaatttatgttaaa |
231 |
Q |
| |
|
|||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| |||||| | | ||||||||| ||||||||||| |||||||| |
|
|
| T |
46625861 |
attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaatcccccaattcctattccaagaacaattcatgttaaa |
46625960 |
T |
|
| Q |
232 |
tcaattt |
238 |
Q |
| |
|
||||||| |
|
|
| T |
46625961 |
tcaattt |
46625967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0600 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0600
Description:
Target: scaffold0600; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 521 - 738
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattc-tga |
115 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| |||||||| ||| ||||| || ||| || ||||||||||||| || |||| || | | |
|
|
| T |
521 |
attcagctcattcccgcaatcttgcaaaatctctcaaatt-tctccaaccg-tcccaatcttccccaa-ttatgattacaacaacgttataaaatcctaa |
617 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatct-caa |
214 |
Q |
| |
|
|||| |||| ||||||| |||| ||| | | ||||||| ||||||||||||| |||| ||||| ||| ||||||||||| || |||||||||| | ||| |
|
|
| T |
618 |
aatcgatctgaacacga--tctaggcataattaacatgactcctacacttttcatttcaaaatctgta-tagaatcctaactctcaattcctattttcaa |
714 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
715 |
gaacaattcatgttaaatcaattt |
738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0335 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0335
Description:
Target: scaffold0335; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 2895 - 2678
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattc-tga |
115 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| |||||||| ||| ||||| || ||| |||||||||||||||| || |||| || | | |
|
|
| T |
2895 |
attcagctcattcccacaatcttgcaatatctctcaaatt-tctccaaccg-tcccaatcttccccaa-ttctgattacaacaacgttataaaatcctaa |
2799 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattcacaattcctatct-caa |
214 |
Q |
| |
|
|||| |||| ||||||| |||| ||| | | ||||||| ||||||||||||| |||| ||||| ||| ||||| |||||||| |||||| ||| | ||| |
|
|
| T |
2798 |
aatcgatctgaacacga--tctaggcataattaacatgactcctacacttttcatttcaaaatcggta-tagaaccctaattctcaattcttattttcaa |
2702 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
2701 |
gaacaattcatgttaaatcaattt |
2678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 18408169 - 18408049
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattccta |
160 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| ||| ||||||| || ||| ||||||| ||| |||| ||| |||| ||||||||||||||||| || |
|
|
| T |
18408169 |
ccaaccaattctaatctccctcaaattctgatcacagcaacattatagattaagaaatcattctgaacatgaaaactaaacacattaaacatgattctta |
18408070 |
T |
|
| Q |
161 |
cacttttcctttctaaatcag |
181 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
18408069 |
caccattcctttcaaaatcag |
18408049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 22337307 - 22337485
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || ||||||||| |||||| ||| | ||||||| ||||||| ||||||| ||| | || || |
|
|
| T |
22337307 |
attcatctcattctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctc-caaattcggattacagcaacattataattcctaaa |
22337404 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatg-attcctacacttttcctttctaaatcagtaatagaatcctaattc |
198 |
Q |
| |
|
|||||||| || | |||||||||||| | | |||||| |||| ||| ||||| ||| | |||||||| |||||| |||||||| |
|
|
| T |
22337405 |
atcaatctgaatatgaattctaagcataattaacatgaattcttactctttt-cttccaaaatcagt-atagaaccctaattc |
22337485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 22340845 - 22341023
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || ||||||||| |||||| ||| | ||||||| ||||||| ||||||| ||| | || || |
|
|
| T |
22340845 |
attcatctcattctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctc-caaattcggattacagcaacattataattcctaaa |
22340942 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatg-attcctacacttttcctttctaaatcagtaatagaatcctaattc |
198 |
Q |
| |
|
|||||||| || | |||||||||||| | | |||||| |||| ||| ||||| ||| | |||||||| |||||| |||||||| |
|
|
| T |
22340943 |
atcaatctgaatatgaattctaagcataattaacatgaattcttactctttt-cttccaaaatcagt-atagaaccctaattc |
22341023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 42961353 - 42961493
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || |||||||| |||||||| ||| | ||||||| ||||||| ||||||| ||| | || || |
|
|
| T |
42961353 |
attcatctcattctcacaatcttgcaatttccctcaatttttctccaac-aatcctaacctctc-caaattcggattacagcaacattataattcctaaa |
42961450 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
||| |||| || | |||||||||||| | | ||||||| |||| |
|
|
| T |
42961451 |
atcgatctgaatatgaattctaagcataattaacatgaatcct |
42961493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 1174 - 1336
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
|||||| |||||||| |||||| |||| |||| | |||| || ||||||||| |||||||||||| ||||||||| ||| |||||| || ||| ||| |
|
|
| T |
1174 |
attcagatcattctataaatcttacaaaatctctccaattttc-ccaacaaattctaatctccctc-aattctgatcacagtaacattatagattaagaa |
1271 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcag |
181 |
Q |
| |
|
|||| ||| |||||||| ||||||||| ||||||| |||| ||||| |||||||| ||||||| |
|
|
| T |
1272 |
atcattctgaacacgaacactaagcacaataaacataattcttacaccattcctttcaaaatcag |
1336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16650 - 16770
Alignment:
| Q |
61 |
ccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattccta |
160 |
Q |
| |
|
||||| ||| |||| |||||||||||| |||| ||||||||||| || ||| ||||||| ||| |||||||| |||| ||||||||||||||||| || |
|
|
| T |
16650 |
ccaaccaattctaacctccctcaaattatgatcacaacaacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattctta |
16749 |
T |
|
| Q |
161 |
cacttttcctttctaaatcag |
181 |
Q |
| |
|
|| |||||||| ||||||| |
|
|
| T |
16750 |
aaccattcctttcaaaatcag |
16770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0138
Description:
Target: scaffold0138; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 12081 - 12302
Alignment:
| Q |
16 |
cattcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctg |
114 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||| ||||||||||||||| ||||| || || | | ||||||||||||| ||| || | |||| || |
|
|
| T |
12081 |
cattcagctcattccaacaatcttgcataatctctcaaattctctccaac-aatcccaacctttc-ccaattctgattacagcaatgttaccaaatccta |
12178 |
T |
|
| Q |
115 |
aaatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaatt-cacaattcctatctca |
213 |
Q |
| |
|
||| |||||| |||| | |||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| ||||||| | |||||| ||| ||| |
|
|
| T |
12179 |
aaaacaatctgaacatg-attctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcgtatttca |
12277 |
T |
|
| Q |
214 |
agaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
||||||||| |||| ||||||||| |
|
|
| T |
12278 |
agaacaattcatgtggaatcaattt |
12302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 222476 - 222255
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacatt-ctaaattctga |
115 |
Q |
| |
|
||||||||| ||| |||||||||||| | |||| ||||||||||||||||| ||| || || | ||| |||| |||||| || || |||||| || | |
|
|
| T |
222476 |
attcagctctttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaa-ttcttattacattaatgttactaaatcctta |
222378 |
T |
|
| Q |
116 |
aatcaatctaaacacgaattctaagcacattaaacatgattcctacacttttcctttctaaatcagtaatagaatcctaattca-caattcctatctcaa |
214 |
Q |
| |
|
|| | |||| |||| || ||||||||| | | |||||| ||||||||||||| || ||||||||| ||||| |||||||| |||||| ||| |||| |
|
|
| T |
222377 |
aaacgatctgaacatga-ttctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccgcaattcttatttcaa |
222279 |
T |
|
| Q |
215 |
gaacaatttatgttaaatcaattt |
238 |
Q |
| |
|
|| ||||| ||||||||||||||| |
|
|
| T |
222278 |
gagcaattcatgttaaatcaattt |
222255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0037
Description:
Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 71613 - 71428
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || |||||||| |||||||| ||| | ||||||| |||||||||||| || ||| | || || |
|
|
| T |
71613 |
attcatctcattctcacaatcttgcaatttccctcaatttttctccaac-aatcctaacctctc-caaattcggattacaacaacgttataattcctaaa |
71516 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcc-tacacttttcctttctaaatcagtaatagaatcctaattcacaattc |
205 |
Q |
| |
|
||| |||| || | |||||||||||| | | ||||||| ||| ||| ||||| ||| | |||||||| |||||| |||||||| |||||| |
|
|
| T |
71515 |
atcgatctgaatatgaattctaagcataattaacatgaatccttactctttt-cttccaaaatcagt-atagaaccctaattcccaattc |
71428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 34225 - 34410
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaa |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| | ||| || |||||||| |||||||| ||| | ||||||| ||||||| ||||||| ||| | || || |
|
|
| T |
34225 |
attcatctcattctcacaatcttgcaatttcccccaatttttctccaac-aatcctaacctctc-caaattcggattacagcaacattataattcctaaa |
34322 |
T |
|
| Q |
117 |
atcaatctaaacacgaattctaagcacattaaacatgattcc-tacacttttcctttctaaatcagtaatagaatcctaattcacaattc |
205 |
Q |
| |
|
||| |||| || | |||||||||||| | | ||||||| ||| ||| ||||| ||| | |||||||| |||||| |||||||| |||||| |
|
|
| T |
34323 |
atcgatctgaatatgaattctaagcataattaacatgaatccttactctttt-cttccaaaatcagt-atagaaccctaattcccaattc |
34410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 10070 - 10172
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctca-aattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcc |
158 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||| ||||||||||| || ||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
10070 |
tccaacaaattctaatctcc-tcataattctgatcacaacaacattatagattaagaaatcattctaaacactaa-actaaacacattaaacatgattct |
10167 |
T |
|
| Q |
159 |
tacac |
163 |
Q |
| |
|
||||| |
|
|
| T |
10168 |
tacac |
10172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0232 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0232
Description:
Target: scaffold0232; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 18699 - 18649
Alignment:
| Q |
17 |
attcagctcattctaacaatcttgcaaattctcacaaattctctccaacaa |
67 |
Q |
| |
|
||||||||||||| |||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
18699 |
attcagctcattccaacaatcttgcataatctctcaaattctctccaacaa |
18649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0461
Description:
Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 234 - 113
Alignment:
| Q |
60 |
tccaacaaatcctaatctccctcaaattctgattacaacaacattctaaattctgaaatcaatctaaacacgaattctaagcacattaaacatgattcct |
159 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||||| |||||||| || || ||| ||||||| ||| ||||| || | || | ||||||||||||||| | |
|
|
| T |
234 |
tccaacaaattctaatttccttcaaattctgaccacaacaacgttatagattaagaaatcattctgaacactaaattaaaactcattaaacatgattctt |
135 |
T |
|
| Q |
160 |
acacttttcctttctaaatcag |
181 |
Q |
| |
|
|||| |||||||| ||||||| |
|
|
| T |
134 |
acaccattcctttcaaaatcag |
113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0483 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0483
Description:
Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 11251 - 11202
Alignment:
| Q |
54 |
attctctccaacaaatcctaatctccctcaaattctgattacaacaacatt |
104 |
Q |
| |
|
||||||||||| |||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
11251 |
attctctccaa-aaattctaatctctctcaaattctgattacagcaacatt |
11202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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