View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21322_high_8 (Length: 204)
Name: NF21322_high_8
Description: NF21322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21322_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 17254252 - 17254118
Alignment:
| Q |
18 |
aaaatccctatgagtaaaatccaataattttcgagtttggaccccaagaaaacgattatctaaacgtgacaaacaaaaacaacttgtgtggaaaataaga |
117 |
Q |
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| T |
17254252 |
aaaatccctatgagtaaaatccaataattttcgagtttagaccccaagaaaacgattatctaaacgtgacaaacaaaaacaacttgtgtggaaaataaga |
17254153 |
T |
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| Q |
118 |
gcaaaacatgttcctcacttctcctccacaattcc |
152 |
Q |
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| T |
17254152 |
gcaaaacatgttcctcacttctcctccacaattcc |
17254118 |
T |
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